ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd26m22 |
|---|---|
| Clone Library Name | barley_pub |
>RU17_ARATH (Q42404) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) (U1-70K) Length = 427 Score = 54.7 bits (130), Expect = 1e-07 Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 3/81 (3%) Frame = +3 Query: 12 KRVLVDVERGRTVPNWXXXXXXXXXXXXXICGAS---ADQKPPAREAPSVGRPRSEEPKR 182 +RVLVDVERGRTVPNW + G +Q+P R + +SEEP R Sbjct: 207 RRVLVDVERGRTVPNWRPRRLGGGLGTSRVGGGEEIVGEQQPQGRTS------QSEEPSR 260 Query: 183 GDSRVDRDREKSRERVRERDL 245 ++ REK +ER R R+L Sbjct: 261 PREEREKSREKGKERERSREL 281
>RU17_HUMAN (P08621) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) (U1-70K) Length = 437 Score = 46.2 bits (108), Expect = 5e-05 Identities = 30/90 (33%), Positives = 38/90 (42%), Gaps = 13/90 (14%) Frame = +3 Query: 12 KRVLVDVERGRTVPNWXXXXXXXXXXXXXICGASA-------------DQKPPAREAPSV 152 +RVLVDVERGRTV W GA D++P P Sbjct: 172 RRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDERPGPSPLPHR 231 Query: 153 GRPRSEEPKRGDSRVDRDREKSRERVRERD 242 R R E +R + +RD+E+ R R R RD Sbjct: 232 DRDRDRERERRERSRERDKERERRRSRSRD 261
>RU17_MOUSE (Q62376) U1 small nuclear ribonucleoprotein 70 kDa (U1 SNRNP 70| kDa) (snRNP70) Length = 448 Score = 46.2 bits (108), Expect = 5e-05 Identities = 30/90 (33%), Positives = 38/90 (42%), Gaps = 13/90 (14%) Frame = +3 Query: 12 KRVLVDVERGRTVPNWXXXXXXXXXXXXXICGASA-------------DQKPPAREAPSV 152 +RVLVDVERGRTV W GA D++P P Sbjct: 172 RRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDERPGPSPLPHR 231 Query: 153 GRPRSEEPKRGDSRVDRDREKSRERVRERD 242 R R E +R + +RD+E+ R R R RD Sbjct: 232 DRDRDRERERRERSRERDKERERRRSRSRD 261
>RU17_XENTR (Q66II8) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) (U1-70K) Length = 471 Score = 44.7 bits (104), Expect = 2e-04 Identities = 27/76 (35%), Positives = 36/76 (47%) Frame = +3 Query: 12 KRVLVDVERGRTVPNWXXXXXXXXXXXXXICGASADQKPPAREAPSVGRPRSEEPKRGDS 191 +RVLVDVERGRTV W GA + + R+ S R + +R Sbjct: 172 RRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDERDRDRERERD 231 Query: 192 RVDRDREKSRERVRER 239 R +R RE+ +ER R R Sbjct: 232 RRERSRERDKERERRR 247 Score = 29.6 bits (65), Expect = 5.1 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +3 Query: 156 RPRSEEPKRGDSRVDRDREKSRERVRERDLDEN 254 R RS + D +RDR++ R+R R+RD D + Sbjct: 377 RRRSHRDRERDKDRERDRDRRRDRDRDRDRDRD 409 Score = 29.6 bits (65), Expect = 5.1 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = +3 Query: 156 RPRSEEPKRGDSRVDRDREKSRERVRERDLDEN 254 R R D D+DRE+ R+R R+RD D + Sbjct: 373 RDRDRRRSHRDRERDKDRERDRDRRRDRDRDRD 405 Score = 28.9 bits (63), Expect = 8.7 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = +3 Query: 171 EPKRGDSRVDRDREKSRERVRERDLD 248 E K D +RDREK R++ R+RD D Sbjct: 351 EEKNRDRDRERDREKDRDKDRDRDRD 376
>RU17_XENLA (P09406) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) (U1-70K) Length = 471 Score = 41.2 bits (95), Expect = 0.002 Identities = 29/77 (37%), Positives = 35/77 (45%), Gaps = 1/77 (1%) Frame = +3 Query: 12 KRVLVDVERGRTVPNWXXXXXXXXXXXXXICGASADQKPPAREAPSVGRPRSEEPKRGDS 191 +RVLVDVERGRTV W GA + + R+ S R E +R Sbjct: 175 RRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDERDRERERDRR 234 Query: 192 RVDRDREKS-RERVRER 239 R+REK RER R R Sbjct: 235 ERSREREKEPRERRRSR 251 Score = 28.9 bits (63), Expect = 8.7 Identities = 14/33 (42%), Positives = 19/33 (57%) Frame = +3 Query: 156 RPRSEEPKRGDSRVDRDREKSRERVRERDLDEN 254 + R + R S DRDREK R+R R+R D + Sbjct: 369 KDRDRDRDRRRSHRDRDREKDRDRDRDRRRDRD 401
>UREE_RHILV (Q8RPX9) Urease accessory protein ureE| Length = 198 Score = 40.8 bits (94), Expect = 0.002 Identities = 21/54 (38%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Frame = -3 Query: 507 HVRNLHAHHLSHDPCLSHGDDHERDHDPSPYRDPYHG-PYPYLCPDDHGHGHAH 349 H + H+H HD HGDDH DH S D HG + + D GH H H Sbjct: 142 HSQGGHSHGHDHDHNHDHGDDHGHDHSHSHDHDHEHGYEHEHEHRHDRGHDHDH 195
>HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor| Length = 351 Score = 38.9 bits (89), Expect = 0.008 Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 2/55 (3%) Frame = -3 Query: 507 HVRNLHAHHLSHDPCLSHGDDHERDHD--PSPYRDPYHGPYPYLCPDDHGHGHAH 349 H +LH H H P H HE H P + +P+H + + P H H H H Sbjct: 53 HPEHLHEEHHHHHPEEHHEPHHEEHHHHHPEEHHEPHHEEHHHHHPHPHHHHHHH 107 Score = 32.7 bits (73), Expect = 0.60 Identities = 16/53 (30%), Positives = 22/53 (41%) Frame = -3 Query: 507 HVRNLHAHHLSHDPCLSHGDDHERDHDPSPYRDPYHGPYPYLCPDDHGHGHAH 349 H + H HH HD H H+ H + D +H + + D H H H H Sbjct: 300 HHHDAHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHH--HDAHHHHHHH 350 Score = 32.0 bits (71), Expect = 1.0 Identities = 14/46 (30%), Positives = 18/46 (39%) Frame = -3 Query: 492 HAHHLSHDPCLSHGDDHERDHDPSPYRDPYHGPYPYLCPDDHGHGH 355 H HH H P H H H + P+H + + P H H H Sbjct: 176 HHHHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHH 221 Score = 31.2 bits (69), Expect = 1.8 Identities = 15/48 (31%), Positives = 20/48 (41%) Frame = -3 Query: 492 HAHHLSHDPCLSHGDDHERDHDPSPYRDPYHGPYPYLCPDDHGHGHAH 349 H HH HD H H+ H + D +H + + D H H H H Sbjct: 276 HHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHH---DAHHHHHHH 320 Score = 31.2 bits (69), Expect = 1.8 Identities = 16/53 (30%), Positives = 22/53 (41%) Frame = -3 Query: 507 HVRNLHAHHLSHDPCLSHGDDHERDHDPSPYRDPYHGPYPYLCPDDHGHGHAH 349 H + H HH HD H H+ H + D +H + + D H H H H Sbjct: 241 HHGHHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHH--HDAHHHHHHH 291 Score = 31.2 bits (69), Expect = 1.8 Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 1/49 (2%) Frame = -3 Query: 492 HAHHLSHDPCLSHGDDHERDHDPSPYRDPYHGPYPYLCPDDHGH-GHAH 349 H H H P H HE H P+ +H +P P H H GH H Sbjct: 74 HEEHHHHHPEEHHEPHHEEHHHHHPHPHHHHHHHP---PHHHHHLGHHH 119 Score = 30.8 bits (68), Expect = 2.3 Identities = 15/48 (31%), Positives = 20/48 (41%) Frame = -3 Query: 492 HAHHLSHDPCLSHGDDHERDHDPSPYRDPYHGPYPYLCPDDHGHGHAH 349 H HH HD H H+ H + D +H + + D H H H H Sbjct: 266 HHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHH--HDAHHHHHHH 311 Score = 30.8 bits (68), Expect = 2.3 Identities = 15/48 (31%), Positives = 20/48 (41%) Frame = -3 Query: 492 HAHHLSHDPCLSHGDDHERDHDPSPYRDPYHGPYPYLCPDDHGHGHAH 349 H HH HD H H+ H + D +H + + D H H H H Sbjct: 256 HHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHH--HDAHHHHHHH 301 Score = 30.4 bits (67), Expect = 3.0 Identities = 15/48 (31%), Positives = 19/48 (39%) Frame = -3 Query: 492 HAHHLSHDPCLSHGDDHERDHDPSPYRDPYHGPYPYLCPDDHGHGHAH 349 H HH H P H H H + P+H + + HGH H H Sbjct: 186 HHHHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHH-----HGHHHHH 228 Score = 29.3 bits (64), Expect = 6.7 Identities = 17/54 (31%), Positives = 22/54 (40%) Frame = -3 Query: 510 GHVRNLHAHHLSHDPCLSHGDDHERDHDPSPYRDPYHGPYPYLCPDDHGHGHAH 349 GH + H HH H H D H H + D +H + + D H H H H Sbjct: 233 GHHHHHHHHHGHHHHHHHHHDAHHHHHH---HHDAHHHHHHH--HDAHHHHHHH 281 Score = 29.3 bits (64), Expect = 6.7 Identities = 15/50 (30%), Positives = 19/50 (38%), Gaps = 4/50 (8%) Frame = -3 Query: 492 HAHHLS----HDPCLSHGDDHERDHDPSPYRDPYHGPYPYLCPDDHGHGH 355 H HHL H P H H H + P+H + + P H H H Sbjct: 162 HHHHLGYHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHH 211 Score = 28.9 bits (63), Expect = 8.7 Identities = 15/53 (28%), Positives = 18/53 (33%) Frame = -3 Query: 507 HVRNLHAHHLSHDPCLSHGDDHERDHDPSPYRDPYHGPYPYLCPDDHGHGHAH 349 H + H HH H H H HD + +H D H H H H Sbjct: 227 HHHHHHGHHHHHHHHHGHHHHHHHHHDAHHHHHHHH--------DAHHHHHHH 271
>CSUP_DROME (Q9V3A4) Protein catecholamines up| Length = 449 Score = 37.4 bits (85), Expect = 0.025 Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 3/51 (5%) Frame = -3 Query: 492 HAHHLSHDPCLSH---GDDHERDHDPSPYRDPYHGPYPYLCPDDHGHGHAH 349 H HH HD H G DH+ DHD +H + + DH HGH H Sbjct: 64 HHHHHDHDHDHGHHHHGHDHDHDHDHGHDHGHHHHGHDH--DHDHDHGHHH 112
>CBX8_HUMAN (Q9HC52) Chromobox protein homolog 8 (Polycomb 3 homolog) (Pc3)| (HPC3) (Rectachrome 1) Length = 389 Score = 37.4 bits (85), Expect = 0.025 Identities = 18/39 (46%), Positives = 23/39 (58%) Frame = +3 Query: 126 PPAREAPSVGRPRSEEPKRGDSRVDRDREKSRERVRERD 242 PPA + R+E P+ D DRDRE+ RER RER+ Sbjct: 131 PPASSTSTSSTCRAEAPRDRDRDRDRDRERDRERERERE 169
>HRG_HUMAN (P04196) Histidine-rich glycoprotein precursor| (Histidine-proline-rich glycoprotein) (HPRG) Length = 525 Score = 35.0 bits (79), Expect = 0.12 Identities = 28/96 (29%), Positives = 34/96 (35%) Frame = -3 Query: 468 PCLSHGDDHERDHDPSPYRDPYHGPYPYLCPDDHGHGHAHXXXXXXXXXPCPESCPDLYG 289 P HG RDH P++ HGP P DH HG SC Sbjct: 277 PFKPHGS---RDHH-HPHKPHEHGPPPPPDERDHSHGPPLPQGPPPLLPMSCSSCQHATF 332 Query: 288 GASLPLNHAHGDFHRGLFPVPSHETSPDPYLHGNHP 181 G + H+H + L P H P HG+HP Sbjct: 333 GTNGAQRHSHNNNSSDLHPHKHHSHEQHP--HGHHP 366
>NELFE_MOUSE (P19426) Negative elongation factor E (NELF-E) (RD protein)| Length = 375 Score = 35.0 bits (79), Expect = 0.12 Identities = 20/48 (41%), Positives = 28/48 (58%) Frame = +3 Query: 111 SADQKPPAREAPSVGRPRSEEPKRGDSRVDRDREKSRERVRERDLDEN 254 S ++ AR + S R RS + SR DRDR+K R+R R+RD D + Sbjct: 169 SYEEHGSARSSASPPRSRSRDRSHDRSR-DRDRDKERDRDRDRDRDRD 215 Score = 31.2 bits (69), Expect = 1.8 Identities = 16/49 (32%), Positives = 25/49 (51%) Frame = +3 Query: 108 ASADQKPPAREAPSVGRPRSEEPKRGDSRVDRDREKSRERVRERDLDEN 254 A + PP + RS + R R DRDR++ R+R R++D D + Sbjct: 176 ARSSASPPRSRSRDRSHDRSRDRDRDKER-DRDRDRDRDRDRDKDKDRD 223
>UREE_BURPS (Q63RL2) Urease accessory protein ureE| Length = 205 Score = 34.7 bits (78), Expect = 0.16 Identities = 19/46 (41%), Positives = 20/46 (43%) Frame = -3 Query: 492 HAHHLSHDPCLSHGDDHERDHDPSPYRDPYHGPYPYLCPDDHGHGH 355 H H SHD H DH+ DHD HGP C H HGH Sbjct: 172 HGHSHSHD----HDHDHDHDHDHQ------HGP---CCSHGHHHGH 204
>K0853_HUMAN (Q5T200) Protein KIAA0853| Length = 1668 Score = 34.7 bits (78), Expect = 0.16 Identities = 17/42 (40%), Positives = 22/42 (52%) Frame = +3 Query: 117 DQKPPAREAPSVGRPRSEEPKRGDSRVDRDREKSRERVRERD 242 D++ R V R E + D +RDRE+ RER RERD Sbjct: 657 DERREERRVDRVDDRRDERARERDRERERDRERERERERERD 698 Score = 31.2 bits (69), Expect = 1.8 Identities = 14/29 (48%), Positives = 19/29 (65%) Frame = +3 Query: 156 RPRSEEPKRGDSRVDRDREKSRERVRERD 242 R R E +R R +R+RE+ RER RER+ Sbjct: 741 RERDREKEREREREERERERERERERERE 769 Score = 30.0 bits (66), Expect = 3.9 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = +3 Query: 168 EEPKRGDSRVDRDREKSRERVRERDLD 248 E K D DRDR+ RER RER+ D Sbjct: 718 EREKERDRERDRDRDHDRERERERERD 744 Score = 29.6 bits (65), Expect = 5.1 Identities = 17/41 (41%), Positives = 22/41 (53%) Frame = +3 Query: 120 QKPPAREAPSVGRPRSEEPKRGDSRVDRDREKSRERVRERD 242 +K RE R R E +R +R+RE+ RER RERD Sbjct: 746 EKEREREREERERERERERER-----ERERERERERARERD 781 Score = 28.9 bits (63), Expect = 8.7 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = +3 Query: 156 RPRSEEPKRGDSRVDRDREKSRERVRERD 242 R R +E +R +R+RE+ RER RER+ Sbjct: 743 RDREKEREREREERERERERERERERERE 771 Score = 28.9 bits (63), Expect = 8.7 Identities = 16/45 (35%), Positives = 24/45 (53%) Frame = +3 Query: 120 QKPPAREAPSVGRPRSEEPKRGDSRVDRDREKSRERVRERDLDEN 254 ++ RE V R +R R DR+RE+ RER RER+ + + Sbjct: 655 ERDERREERRVDRVDDRRDERARER-DRERERDRERERERERERD 698
>RCNA_ECO57 (Q8X3U5) Nickel/cobalt efflux system rcnA| Length = 283 Score = 34.3 bits (77), Expect = 0.21 Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 1/56 (1%) Frame = -3 Query: 513 RGHVRNLHAHHL-SHDPCLSHGDDHERDHDPSPYRDPYHGPYPYLCPDDHGHGHAH 349 R + N+H HH H+ H DH+ DHD + HG D H HA+ Sbjct: 114 RNWLENMHEHHHHDHEHHQDHDHDHDHDHDHEHHHHHEHGDNEEY-QDAHARAHAN 168
>RCNA_ECOLI (P76425) Nickel/cobalt efflux system rcnA| Length = 274 Score = 34.3 bits (77), Expect = 0.21 Identities = 18/55 (32%), Positives = 22/55 (40%) Frame = -3 Query: 513 RGHVRNLHAHHLSHDPCLSHGDDHERDHDPSPYRDPYHGPYPYLCPDDHGHGHAH 349 R + N+H H H H DHE HD + HG Y D H HA+ Sbjct: 114 RNWLENMHGHDYEH-----HHHDHEHHHDHGHHHHHEHGEY----QDAHARAHAN 159
>HRG_RABIT (Q28640) Histidine-rich glycoprotein precursor| (Histidine-proline-rich glycoprotein) (HPRG) (Fragment) Length = 526 Score = 33.9 bits (76), Expect = 0.27 Identities = 33/112 (29%), Positives = 38/112 (33%), Gaps = 8/112 (7%) Frame = -3 Query: 492 HAHHLSHDPCLSHGDD----HERDHDPSPYRDPYHGPYPYLCPDDHG---HGHAHXXXXX 334 H HH P H H P P+ P HGP P+ P HG HGH Sbjct: 341 HGHHPHGPPPHGHPPHGPPPRHPPHGPPPHGHPPHGPPPHGHP-PHGPPPHGH------- 392 Query: 333 XXXXPCPESCPDLYGGASLPLNHAHGDFHRGLFPVPSHETSP-DPYLHGNHP 181 P P +G H HG G PSH+ P D + H P Sbjct: 393 ------PPHGPPPHGHPP----HGHGFHDHGPCDPPSHKEGPQDLHQHAMGP 434
>ACINU_HUMAN (Q9UKV3) Apoptotic chromatin condensation inducer in the nucleus| (Acinus) Length = 1341 Score = 33.9 bits (76), Expect = 0.27 Identities = 18/29 (62%), Positives = 19/29 (65%) Frame = +3 Query: 156 RPRSEEPKRGDSRVDRDREKSRERVRERD 242 R R E RGD DRDRE+ RER RERD Sbjct: 1291 RERERERDRGDR--DRDRERDRERGRERD 1317 Score = 31.2 bits (69), Expect = 1.8 Identities = 16/41 (39%), Positives = 23/41 (56%) Frame = +3 Query: 117 DQKPPAREAPSVGRPRSEEPKRGDSRVDRDREKSRERVRER 239 +QK +EA + E KR + +RDRE+ RER R+R Sbjct: 1259 EQKEREKEAERERNRQLEREKRREHSRERDRERERERERDR 1299 Score = 30.4 bits (67), Expect = 3.0 Identities = 16/38 (42%), Positives = 21/38 (55%) Frame = +3 Query: 135 REAPSVGRPRSEEPKRGDSRVDRDREKSRERVRERDLD 248 R S R R E +R R DRDR++ R+R R R+ D Sbjct: 1280 RREHSRERDRERERERERDRGDRDRDRERDRERGRERD 1317
>RU17_DROME (P17133) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) Length = 448 Score = 33.5 bits (75), Expect = 0.35 Identities = 35/100 (35%), Positives = 40/100 (40%), Gaps = 22/100 (22%) Frame = +3 Query: 9 NKRVLVDVERGRTVPNWXXXXXXXXXXXXXICGASADQKPPAREAPSVGRPR-------- 164 +KRVLVDVER RTV W G + K RE R R Sbjct: 170 SKRVLVDVERARTVKGWLPRRLGGGLGGTRRGGNDVNIKHSGREDNERERERYRLERERE 229 Query: 165 -SEEPKRG------DSR------VDRDREKSRE-RVRERD 242 E P RG D+R +R R +SRE R RERD Sbjct: 230 DREGPGRGGGSNGLDARPGRGFGAERRRSRSRERRDRERD 269 Score = 28.9 bits (63), Expect = 8.7 Identities = 17/45 (37%), Positives = 25/45 (55%) Frame = +3 Query: 105 GASADQKPPAREAPSVGRPRSEEPKRGDSRVDRDREKSRERVRER 239 G S + R+ + R R +E R D R DR+RE+ R+R RE+ Sbjct: 279 GRSRSRSRERRKRRAGSRERYDEFDRRDRR-DRERERDRDREREK 322
>KE4L_CAEEL (Q9XTQ7) Hypothetical Ke4-like protein H13N06.5 in chromosome X| Length = 462 Score = 33.5 bits (75), Expect = 0.35 Identities = 18/48 (37%), Positives = 23/48 (47%) Frame = -3 Query: 492 HAHHLSHDPCLSHGDDHERDHDPSPYRDPYHGPYPYLCPDDHGHGHAH 349 H H +HD H DH HD +HG + + +DH HGHAH Sbjct: 76 HDHGHAHDHDHGHAHDHGHAHD-------HHG-HSHDEEEDHHHGHAH 115
>HR4_DROME (Q9W539) Hormone receptor 4 (dHR4)| Length = 1518 Score = 33.1 bits (74), Expect = 0.46 Identities = 16/37 (43%), Positives = 20/37 (54%) Frame = +3 Query: 138 EAPSVGRPRSEEPKRGDSRVDRDREKSRERVRERDLD 248 E P P S + + +RDRE+ RER RERD D Sbjct: 386 EPPPPASPSSTSSTQRERERERDRERDRERERERDRD 422 Score = 32.7 bits (73), Expect = 0.60 Identities = 14/45 (31%), Positives = 24/45 (53%) Frame = +3 Query: 120 QKPPAREAPSVGRPRSEEPKRGDSRVDRDREKSRERVRERDLDEN 254 + PP S + E + D DR+RE+ R+R RER+ +++ Sbjct: 386 EPPPPASPSSTSSTQRERERERDRERDRERERERDRDREREREQS 430
>NELFE_HUMAN (P18615) Negative elongation factor E (NELF-E) (RD protein)| Length = 380 Score = 33.1 bits (74), Expect = 0.46 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Frame = +3 Query: 105 GASADQKPPAREAPSVGRPRSEEPKRGDSRV-DRDREKSRERVRERDLDEN 254 GA + PP + R+ + R R DRDR++ RER R+RD D + Sbjct: 175 GAHSSASPPRSRSRDRSHERNRDRDRDRERDRDRDRDRDRERDRDRDRDRD 225 Score = 30.4 bits (67), Expect = 3.0 Identities = 16/33 (48%), Positives = 20/33 (60%) Frame = +3 Query: 156 RPRSEEPKRGDSRVDRDREKSRERVRERDLDEN 254 R R E R R DRDR++ R+R RERD D + Sbjct: 210 RDRDRERDRDRDR-DRDRDRERDRDRERDRDRD 241
>SLYD_SHIFL (P0A9L2) FKBP-type peptidyl-prolyl cis-trans isomerase slyD (EC| 5.2.1.8) (PPIase) (Rotamase) (Histidine-rich protein) (WHP) Length = 196 Score = 33.1 bits (74), Expect = 0.46 Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 3/30 (10%) Frame = -3 Query: 510 GHVRNLHAHHLSHDP---CLSHGDDHERDH 430 GHV H HH HD C HG DH +H Sbjct: 150 GHVHGAHDHHHDHDHDGCCGGHGHDHGHEH 179
>SLYD_ECOLI (P0A9K9) FKBP-type peptidyl-prolyl cis-trans isomerase slyD (EC| 5.2.1.8) (PPIase) (Rotamase) (Histidine-rich protein) (WHP) Length = 196 Score = 33.1 bits (74), Expect = 0.46 Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 3/30 (10%) Frame = -3 Query: 510 GHVRNLHAHHLSHDP---CLSHGDDHERDH 430 GHV H HH HD C HG DH +H Sbjct: 150 GHVHGAHDHHHDHDHDGCCGGHGHDHGHEH 179
>SLYD_ECOL6 (P0A9L0) FKBP-type peptidyl-prolyl cis-trans isomerase slyD (EC| 5.2.1.8) (PPIase) (Rotamase) (Histidine-rich protein) (WHP) Length = 196 Score = 33.1 bits (74), Expect = 0.46 Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 3/30 (10%) Frame = -3 Query: 510 GHVRNLHAHHLSHDP---CLSHGDDHERDH 430 GHV H HH HD C HG DH +H Sbjct: 150 GHVHGAHDHHHDHDHDGCCGGHGHDHGHEH 179
>SLYD_ECO57 (P0A9L1) FKBP-type peptidyl-prolyl cis-trans isomerase slyD (EC| 5.2.1.8) (PPIase) (Rotamase) (Histidine-rich protein) (WHP) Length = 196 Score = 33.1 bits (74), Expect = 0.46 Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 3/30 (10%) Frame = -3 Query: 510 GHVRNLHAHHLSHDP---CLSHGDDHERDH 430 GHV H HH HD C HG DH +H Sbjct: 150 GHVHGAHDHHHDHDHDGCCGGHGHDHGHEH 179
>U2AF2_CAEBR (P90727) Splicing factor U2AF 65 kDa subunit (U2 auxiliary factor| 65 kDa subunit) (U2 snRNP auxiliary factor large subunit) (U2AF65) Length = 488 Score = 32.7 bits (73), Expect = 0.60 Identities = 18/46 (39%), Positives = 22/46 (47%) Frame = +3 Query: 117 DQKPPAREAPSVGRPRSEEPKRGDSRVDRDREKSRERVRERDLDEN 254 D+K R R + R R DRDR +SRER R+R D N Sbjct: 54 DRKKRKRSRSRDRGDRDRKRSRSRDRRDRDRSRSRERRRDRSRDRN 99
>UREE_RALEJ (Q473Q8) Urease accessory protein ureE| Length = 221 Score = 32.7 bits (73), Expect = 0.60 Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 1/49 (2%) Frame = -3 Query: 492 HAHHLSHDPCLSHGDDHERDHD-PSPYRDPYHGPYPYLCPDDHGHGHAH 349 H+H SH SH DH+ DHD + HGP G GH H Sbjct: 182 HSHSHSHSHSHSHSHDHDHDHDHEHDVKGHVHGP---------GCGHKH 221
>SEPP1_BOVIN (P49907) Selenoprotein P-like protein precursor| Length = 402 Score = 32.3 bits (72), Expect = 0.79 Identities = 19/68 (27%), Positives = 26/68 (38%), Gaps = 1/68 (1%) Frame = -3 Query: 441 ERDHDPSPYRDPYHGPYPYLCPDDHGHGHAHXXXXXXXXXPCPE-SCPDLYGGASLPLNH 265 +R H P P+ P+ P+P+ P H H H H P+ PD H Sbjct: 202 QRHHHPHPHSHPHPHPHPHPHPHPHPH-HGHQLHENAHLSESPKPDTPDTPENPPTSGLH 260 Query: 264 AHGDFHRG 241 H H+G Sbjct: 261 HHHHRHKG 268
>RSP7_CAEEL (O01159) Probable splicing factor, arginine/serine-rich 7 (p54)| Length = 452 Score = 32.3 bits (72), Expect = 0.79 Identities = 16/36 (44%), Positives = 21/36 (58%) Frame = +3 Query: 135 REAPSVGRPRSEEPKRGDSRVDRDREKSRERVRERD 242 R + S R RS P+R DRDR++ R+R R RD Sbjct: 273 RRSRSPRRRRSPSPRRRRDSRDRDRDRDRDRRRSRD 308 Score = 28.9 bits (63), Expect = 8.7 Identities = 15/31 (48%), Positives = 18/31 (58%) Frame = +3 Query: 156 RPRSEEPKRGDSRVDRDREKSRERVRERDLD 248 R RS P+R S R R SR+R R+RD D Sbjct: 272 RRRSRSPRRRRSPSPRRRRDSRDRDRDRDRD 302
>RCNA_ECOL6 (Q8FFX9) Nickel/cobalt efflux system rcnA| Length = 274 Score = 32.3 bits (72), Expect = 0.79 Identities = 18/55 (32%), Positives = 22/55 (40%) Frame = -3 Query: 513 RGHVRNLHAHHLSHDPCLSHGDDHERDHDPSPYRDPYHGPYPYLCPDDHGHGHAH 349 R + N+H H H H DHE HD + HG Y D H HA+ Sbjct: 114 RNWLENMHEHDHEH-----HHHDHEDHHDHGHHHHHEHGEY----QDAHARAHAN 159
>FIP1_PONPY (Q5RAA7) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-like 1)| Length = 588 Score = 32.0 bits (71), Expect = 1.0 Identities = 18/42 (42%), Positives = 23/42 (54%) Frame = +3 Query: 132 AREAPSVGRPRSEEPKRGDSRVDRDREKSRERVRERDLDENP 257 AR R R + +R R DR+RE++RER RERD P Sbjct: 449 ARREKDRDRERDRDRERDRDR-DRERERTRERERERDHSPTP 489
>UREE_YERFR (Q6UR67) Urease accessory protein ureE| Length = 239 Score = 32.0 bits (71), Expect = 1.0 Identities = 17/53 (32%), Positives = 20/53 (37%) Frame = -3 Query: 507 HVRNLHAHHLSHDPCLSHGDDHERDHDPSPYRDPYHGPYPYLCPDDHGHGHAH 349 H LH H + SHGD H HD + DHGH H+H Sbjct: 193 HGSGLHIHGIH-----SHGDGHSHSHDSHSHSHD----------SDHGHSHSH 230
>PO3F2_RAT (P56222) POU domain, class 3, transcription factor 2 (Nervous| system-specific octamer-binding transcription factor N-Oct-3) (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Protein Brn-2) Length = 445 Score = 32.0 bits (71), Expect = 1.0 Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 1/55 (1%) Frame = -3 Query: 510 GHVRNLHAHHLSHDPCLSHGDDHERDHDPSPYRDPYHGPYPYLCPD-DHGHGHAH 349 G LH H L +H + H DH P P+ P+ P P P GH AH Sbjct: 207 GQPAGLHHHGLRD----AHDEPHHADHHPHPHSHPHQQPPPPPPPQGPPGHPGAH 257
>PO3F2_MOUSE (P31360) POU domain, class 3, transcription factor 2 (Nervous| system-specific octamer-binding transcription factor N-Oct-3) (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Protein Brn-2) Length = 445 Score = 32.0 bits (71), Expect = 1.0 Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 1/55 (1%) Frame = -3 Query: 510 GHVRNLHAHHLSHDPCLSHGDDHERDHDPSPYRDPYHGPYPYLCPD-DHGHGHAH 349 G LH H L +H + H DH P P+ P+ P P P GH AH Sbjct: 207 GQPAGLHHHGLRD----AHDEPHHADHHPHPHSHPHQQPPPPPPPQGPPGHPGAH 257
>PO3F2_HUMAN (P20265) POU domain, class 3, transcription factor 2 (Nervous| system-specific octamer-binding transcription factor N-Oct-3) (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Protein Brn-2) Length = 443 Score = 32.0 bits (71), Expect = 1.0 Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 1/55 (1%) Frame = -3 Query: 510 GHVRNLHAHHLSHDPCLSHGDDHERDHDPSPYRDPYHGPYPYLCPD-DHGHGHAH 349 G LH H L +H + H DH P P+ P+ P P P GH AH Sbjct: 205 GQPAGLHHHGLRD----AHDEPHHADHHPHPHSHPHQQPPPPPPPQGPPGHPGAH 255
>FIP1_HUMAN (Q6UN15) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-like 1)| (Factor interacting with PAP) (hFip1) (Rearranged in hypereosinophilia) Length = 594 Score = 32.0 bits (71), Expect = 1.0 Identities = 18/42 (42%), Positives = 23/42 (54%) Frame = +3 Query: 132 AREAPSVGRPRSEEPKRGDSRVDRDREKSRERVRERDLDENP 257 AR R R + +R R DR+RE++RER RERD P Sbjct: 455 ARREKDRDRERDRDRERDRDR-DRERERTRERERERDHSPTP 495
>IF3A_HUMAN (Q14152) Eukaryotic translation initiation factor 3 subunit 10 (eIF-3| theta) (eIF3 p167) (eIF3 p180) (eIF3 p185) (eIF3a) Length = 1382 Score = 32.0 bits (71), Expect = 1.0 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 3/44 (6%) Frame = +3 Query: 126 PPAREAPSVGRPRSEEPKRGDSRVDR---DREKSRERVRERDLD 248 PP PS R E +R DR D++ RER RERD+D Sbjct: 1191 PPRESRPSEEREWDREKERDRDNQDREENDKDPERERDRERDVD 1234
>SNUT3_BRARE (Q6DH74) U4/U6.U5 tri-snRNP-associated protein 3| Length = 158 Score = 32.0 bits (71), Expect = 1.0 Identities = 19/51 (37%), Positives = 25/51 (49%) Frame = +3 Query: 105 GASADQKPPAREAPSVGRPRSEEPKRGDSRVDRDREKSRERVRERDLDENP 257 G S + PP RE R RS R R +R+R +SR+R R R +P Sbjct: 2 GRSRSRTPPRRERR---RSRSSSRDRERRRRERERSRSRDRDRRRSRSRSP 49
>FIP1_RAT (Q5U317) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-like 1)| Length = 536 Score = 31.6 bits (70), Expect = 1.3 Identities = 18/42 (42%), Positives = 22/42 (52%) Frame = +3 Query: 132 AREAPSVGRPRSEEPKRGDSRVDRDREKSRERVRERDLDENP 257 AR R R + R R DRDRE+ R R RER+ D +P Sbjct: 395 ARREKDRDRDRERDRDRERER-DRDRERERTRERERERDHSP 435 Score = 30.4 bits (67), Expect = 3.0 Identities = 16/34 (47%), Positives = 21/34 (61%) Frame = +3 Query: 156 RPRSEEPKRGDSRVDRDREKSRERVRERDLDENP 257 R R + +R R DR+RE++RER RERD P Sbjct: 405 RERDRDRERERDR-DRERERTRERERERDHSPTP 437
>CWC25_YARLI (Q6C1V6) Pre-mRNA-splicing factor CWC25| Length = 561 Score = 31.6 bits (70), Expect = 1.3 Identities = 15/31 (48%), Positives = 20/31 (64%) Frame = +3 Query: 156 RPRSEEPKRGDSRVDRDREKSRERVRERDLD 248 R R +R SR DRDR++ R+R R+RD D Sbjct: 277 RSRDRSRERLRSRRDRDRDRDRDRDRDRDRD 307
>RBM25_HUMAN (P49756) Probable RNA-binding protein 25 (RNA-binding motif protein| 25) (RNA-binding region-containing protein 7) (Protein S164) Length = 784 Score = 31.6 bits (70), Expect = 1.3 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = +3 Query: 156 RPRSEEPKRGDSRVDRDREKSRERVRERDLDEN 254 R R E + + +R++EK RER RERD D + Sbjct: 261 RERREREREREREREREKEKERERERERDRDRD 293 Score = 29.6 bits (65), Expect = 5.1 Identities = 16/33 (48%), Positives = 20/33 (60%) Frame = +3 Query: 156 RPRSEEPKRGDSRVDRDREKSRERVRERDLDEN 254 R R++E R DRDRE+ R+R RER D N Sbjct: 292 RDRTKERDR-----DRDRERDRDRDRERSSDRN 319 Score = 29.3 bits (64), Expect = 6.7 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = +3 Query: 156 RPRSEEPKRGDSRVDRDREKSRERVRERD 242 R R E +R R +R+RE+ RER RE++ Sbjct: 251 RERERERERERERREREREREREREREKE 279 Score = 28.9 bits (63), Expect = 8.7 Identities = 15/32 (46%), Positives = 21/32 (65%) Frame = +3 Query: 156 RPRSEEPKRGDSRVDRDREKSRERVRERDLDE 251 R R E +R R +R+RE+ RER RER+ D+ Sbjct: 340 RERERERERERER-EREREREREREREREKDK 370 Score = 28.9 bits (63), Expect = 8.7 Identities = 15/29 (51%), Positives = 19/29 (65%) Frame = +3 Query: 156 RPRSEEPKRGDSRVDRDREKSRERVRERD 242 R RS E R R +R+RE+ RER RER+ Sbjct: 322 RSRSREKSRDRER-ERERERERERERERE 349
>KE4_PONPY (Q5RFD5) Zinc transporter SLC39A7 (Solute carrier family 39 member| 7) (Histidine-rich membrane protein Ke4) Length = 469 Score = 31.6 bits (70), Expect = 1.3 Identities = 27/99 (27%), Positives = 31/99 (31%), Gaps = 2/99 (2%) Frame = -3 Query: 504 VRNLHAHHLSHDPCLS--HGDDHERDHDPSPYRDPYHGPYPYLCPDDHGHGHAHXXXXXX 331 V L H HD HG H H+ D +HG HGHGH H Sbjct: 25 VAELGGHDDLHDDLQEDFHGHSHRHSHE-----DFHHGH-----SHAHGHGHTHESIWHG 74 Query: 330 XXXPCPESCPDLYGGASLPLNHAHGDFHRGLFPVPSHET 214 H+HGD H G SHE+ Sbjct: 75 HTHGHDHG-------------HSHGDLHHGHSHGHSHES 100
>KE4_CANFA (Q5TJF6) Zinc transporter SLC39A7 (Solute carrier family 39 member| 7) (Histidine-rich membrane protein Ke4) Length = 469 Score = 31.6 bits (70), Expect = 1.3 Identities = 24/81 (29%), Positives = 28/81 (34%) Frame = -3 Query: 456 HGDDHERDHDPSPYRDPYHGPYPYLCPDDHGHGHAHXXXXXXXXXPCPESCPDLYGGASL 277 HG H R H+ D +HG + Y HGHGH H Sbjct: 43 HGHSHRRSHE-----DFHHG-HSYA----HGHGHTHESIWHGHTHGHEHG---------- 82 Query: 276 PLNHAHGDFHRGLFPVPSHET 214 HAH D H G SHE+ Sbjct: 83 ---HAHEDLHHGHSHGQSHES 100
>UREE_YERKR (Q6UR50) Urease accessory protein ureE| Length = 228 Score = 31.6 bits (70), Expect = 1.3 Identities = 20/53 (37%), Positives = 21/53 (39%) Frame = -3 Query: 507 HVRNLHAHHLSHDPCLSHGDDHERDHDPSPYRDPYHGPYPYLCPDDHGHGHAH 349 H LH H + SHGD H DHD S HG DH H H H Sbjct: 193 HGSGLHIHAIH-----SHGDGHSHDHDHS----HSHG--------DHDHDHKH 228
>FIP1_MOUSE (Q9D824) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-like 1)| Length = 581 Score = 31.6 bits (70), Expect = 1.3 Identities = 18/42 (42%), Positives = 22/42 (52%) Frame = +3 Query: 132 AREAPSVGRPRSEEPKRGDSRVDRDREKSRERVRERDLDENP 257 AR R R + R R DRDRE+ R R RER+ D +P Sbjct: 440 ARREKDRDRDRERDRDRERER-DRDRERERTRERERERDHSP 480 Score = 30.4 bits (67), Expect = 3.0 Identities = 16/34 (47%), Positives = 21/34 (61%) Frame = +3 Query: 156 RPRSEEPKRGDSRVDRDREKSRERVRERDLDENP 257 R R + +R R DR+RE++RER RERD P Sbjct: 450 RERDRDRERERDR-DRERERTRERERERDHSPTP 482
>PQBP1_HUMAN (O60828) Polyglutamine-binding protein 1 (Polyglutamine| tract-binding protein 1) (PQBP-1) (38 kDa nuclear protein containing a WW domain) (Npw38) Length = 265 Score = 31.6 bits (70), Expect = 1.3 Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%) Frame = +3 Query: 153 GRPRSEEPK-RGDSRVDRDREKSRERVRERDLDE 251 G +S+ + RG +VDR+RE+ RER R+R D+ Sbjct: 134 GHDKSDRDRERGYDKVDRERERDRERDRDRGYDK 167
>SOX7_MOUSE (P40646) Transcription factor SOX-7 (mSOX7)| Length = 380 Score = 31.2 bits (69), Expect = 1.8 Identities = 25/83 (30%), Positives = 28/83 (33%), Gaps = 4/83 (4%) Frame = -3 Query: 456 HGDDHERDHDPSPYRDPYHGPYPYLCPDDHGH---GHAHXXXXXXXXXPCPESCPDLYGG 286 HG H H P P P P P C G G + CP S P Y Sbjct: 220 HGHPHHLPHLPGPPYSPEFTPSPLHCSHPLGSLALGQSPGVSMMSSVSGCPPS-PAYYSH 278 Query: 285 ASLPLNHAHGDFHRG-LFPVPSH 220 A+ H + H G L P P H Sbjct: 279 ATYHPLHPNLQAHLGQLSPPPEH 301
>CREB5_HUMAN (Q02930) cAMP response element-binding protein 5 (CRE-BPa)| Length = 508 Score = 31.2 bits (69), Expect = 1.8 Identities = 27/107 (25%), Positives = 33/107 (30%), Gaps = 1/107 (0%) Frame = -3 Query: 510 GHVRNLHAHHLSHDPCLSHGDDHERDHDPSPYRDPYHGPYPYLCPDDHGHGHAHXXXXXX 331 GH+ + P H H H P PY P+ + P H H H Sbjct: 256 GHMMEMMGSRQDQTPH-HHMHSHPHQHQTLPPHHPY--PHQHQHPAHHPHPQPHHQQ--- 309 Query: 330 XXXPCPESCPDLYGGASLPLNHAHGDFHRGLFPVPSH-ETSPDPYLH 193 NH H H L P+H +TSP P LH Sbjct: 310 --------------------NHPHHHSHSHLHAHPAHHQTSPHPPLH 336
>RCNA_SALTY (Q8ZM94) Nickel/cobalt efflux system rcnA| Length = 288 Score = 31.2 bits (69), Expect = 1.8 Identities = 16/46 (34%), Positives = 17/46 (36%) Frame = -3 Query: 486 HHLSHDPCLSHGDDHERDHDPSPYRDPYHGPYPYLCPDDHGHGHAH 349 HH HD H DH+ DHD D H HGH H Sbjct: 121 HHHDHDHDHDHDHDHDHDHDHDHDHDHDH------------HGHIH 154 Score = 29.3 bits (64), Expect = 6.7 Identities = 17/46 (36%), Positives = 18/46 (39%) Frame = -3 Query: 492 HAHHLSHDPCLSHGDDHERDHDPSPYRDPYHGPYPYLCPDDHGHGH 355 H H HD H DH+ DHD D H D HGH H Sbjct: 121 HHHDHDHDHDHDHDHDHDHDHD----HDHDH--------DHHGHIH 154
>PPIL4_USTMA (P0C196) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) Length = 551 Score = 30.8 bits (68), Expect = 2.3 Identities = 14/42 (33%), Positives = 24/42 (57%) Frame = +3 Query: 117 DQKPPAREAPSVGRPRSEEPKRGDSRVDRDREKSRERVRERD 242 D+ ++ S R E+ + SR DRDR++ R+R R+R+ Sbjct: 485 DEHTRRHDSSSTAARRDEDRRSERSRHDRDRDRDRDRDRDRE 526
>PPIL4_CRYNE (Q5KNY5) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) Length = 504 Score = 30.8 bits (68), Expect = 2.3 Identities = 16/32 (50%), Positives = 19/32 (59%) Frame = +3 Query: 162 RSEEPKRGDSRVDRDREKSRERVRERDLDENP 257 RS RG R DR+R RER RER+ D +P Sbjct: 408 RSAPSSRGSKR-DRERSPKRERDRERERDRSP 438
>KE4_MOUSE (Q31125) Zinc transporter SLC39A7 (Solute carrier family 39 member| 7) (Histidine-rich membrane protein Ke4) Length = 476 Score = 30.8 bits (68), Expect = 2.3 Identities = 28/103 (27%), Positives = 34/103 (33%) Frame = -3 Query: 492 HAHHLSHDPCLSHGDDHERDHDPSPYRDPYHGPYPYLCPDDHGHGHAHXXXXXXXXXPCP 313 H+H SH+ HG H H+ +H HGHGH H Sbjct: 45 HSHGHSHED-FHHGHSHGHSHED------FH----------HGHGHTHESIW-------- 79 Query: 312 ESCPDLYGGASLPLNHAHGDFHRGLFPVPSHETSPDPYLHGNH 184 +G A +H HG L SH S D HG H Sbjct: 80 ------HGHAH---SHDHGHSREELHHGHSHGHSHDSLHHGGH 113
>DDX46_RAT (Q62780) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) (Helicase of 117.4 kDa) Length = 1032 Score = 30.8 bits (68), Expect = 2.3 Identities = 21/48 (43%), Positives = 24/48 (50%), Gaps = 7/48 (14%) Frame = +3 Query: 120 QKPPAREAPSVGRPRSEEP-----KRGDSRVDR--DREKSRERVRERD 242 +K A S R RS P KRGD R R DR++ RER R RD Sbjct: 9 RKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRD 56
>DDX46_PONPY (Q5R6D8) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) Length = 1032 Score = 30.8 bits (68), Expect = 2.3 Identities = 21/48 (43%), Positives = 24/48 (50%), Gaps = 7/48 (14%) Frame = +3 Query: 120 QKPPAREAPSVGRPRSEEP-----KRGDSRVDR--DREKSRERVRERD 242 +K A S R RS P KRGD R R DR++ RER R RD Sbjct: 9 RKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRD 56
>DDX46_MOUSE (Q569Z5) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) Length = 1032 Score = 30.8 bits (68), Expect = 2.3 Identities = 21/48 (43%), Positives = 24/48 (50%), Gaps = 7/48 (14%) Frame = +3 Query: 120 QKPPAREAPSVGRPRSEEP-----KRGDSRVDR--DREKSRERVRERD 242 +K A S R RS P KRGD R R DR++ RER R RD Sbjct: 9 RKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRD 56
>DDX46_HUMAN (Q7L014) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) (PRP5 homolog) Length = 1032 Score = 30.8 bits (68), Expect = 2.3 Identities = 21/48 (43%), Positives = 24/48 (50%), Gaps = 7/48 (14%) Frame = +3 Query: 120 QKPPAREAPSVGRPRSEEP-----KRGDSRVDR--DREKSRERVRERD 242 +K A S R RS P KRGD R R DR++ RER R RD Sbjct: 9 RKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRD 56
>UREE_BURMA (Q62HR9) Urease accessory protein ureE| Length = 184 Score = 30.8 bits (68), Expect = 2.3 Identities = 17/51 (33%), Positives = 20/51 (39%) Frame = -3 Query: 507 HVRNLHAHHLSHDPCLSHGDDHERDHDPSPYRDPYHGPYPYLCPDDHGHGH 355 H + H+H SHD H DH+ H PS C H HGH Sbjct: 148 HHGHSHSHSHSHDH--DHDHDHDHQHGPS-------------CSHGHHHGH 183
>DIDO1_HUMAN (Q9BTC0) Death-inducer obliterator 1 (DIO-1) (Death-associated| transcription factor 1) (DATF-1) (hDido1) Length = 2240 Score = 30.8 bits (68), Expect = 2.3 Identities = 17/32 (53%), Positives = 18/32 (56%) Frame = +3 Query: 147 SVGRPRSEEPKRGDSRVDRDREKSRERVRERD 242 S R R E RG DR RE+SR R RERD Sbjct: 2154 SANRDREREADRG-KEWDRSRERSRNRERERD 2184 Score = 29.6 bits (65), Expect = 5.1 Identities = 16/31 (51%), Positives = 21/31 (67%) Frame = +3 Query: 156 RPRSEEPKRGDSRVDRDREKSRERVRERDLD 248 R R+ E +R D R DRDR +SRER R++ D Sbjct: 2175 RSRNRERER-DRRRDRDRSRSRERDRDKARD 2204
>RSP6_CAEEL (Q18409) Probable splicing factor, arginine/serine-rich 6| (RNA-binding protein srp-1) (CeSRp20) Length = 179 Score = 30.8 bits (68), Expect = 2.3 Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 3/38 (7%) Frame = +3 Query: 153 GRPRSEEPKRGDSRV---DRDREKSRERVRERDLDENP 257 GR RS + R SR DR RE+SRER R R +P Sbjct: 116 GRDRSRDRSRDRSRDRSRDRSRERSRERERTRSRSRSP 153
>CREB5_MOUSE (Q8K1L0) cAMP response element-binding protein 5 (CRE-BPa)| (Fragment) Length = 353 Score = 30.8 bits (68), Expect = 2.3 Identities = 27/107 (25%), Positives = 33/107 (30%), Gaps = 1/107 (0%) Frame = -3 Query: 510 GHVRNLHAHHLSHDPCLSHGDDHERDHDPSPYRDPYHGPYPYLCPDDHGHGHAHXXXXXX 331 GH+ + P H H H P PY P+ + P H H H Sbjct: 101 GHMMEMMGSRQDQTPH-HHLHSHPHQHQTLPPHHPY--PHQHQHPAHHPHPQPHHQQ--- 154 Query: 330 XXXPCPESCPDLYGGASLPLNHAHGDFHRGLFPVPSH-ETSPDPYLH 193 NH H H L P+H +TSP P LH Sbjct: 155 --------------------NHPHHHSHSHLHAHPAHHQTSPHPPLH 181
>PO3F1_MOUSE (P21952) POU domain, class 3, transcription factor 1| (Octamer-binding transcription factor 6) (Oct-6) (POU-domain transcription factor SCIP) Length = 449 Score = 30.4 bits (67), Expect = 3.0 Identities = 15/36 (41%), Positives = 17/36 (47%) Frame = -3 Query: 456 HGDDHERDHDPSPYRDPYHGPYPYLCPDDHGHGHAH 349 H D HE +PSP P+L H HGHAH Sbjct: 190 HEDGHEAQLEPSPP--------PHLGAHGHAHGHAH 217
>BARH2_DROME (Q24256) Homeobox protein B-H2 (Homeobox protein BarH2)| Length = 645 Score = 30.4 bits (67), Expect = 3.0 Identities = 16/42 (38%), Positives = 21/42 (50%) Frame = +3 Query: 126 PPAREAPSVGRPRSEEPKRGDSRVDRDREKSRERVRERDLDE 251 PP R R E + + +RD E+ RER RERD D+ Sbjct: 596 PPLNPGSPPHRERINEEEDRERDEERDIERERERERERDEDD 637 Score = 30.0 bits (66), Expect = 3.9 Identities = 17/42 (40%), Positives = 22/42 (52%) Frame = +3 Query: 126 PPAREAPSVGRPRSEEPKRGDSRVDRDREKSRERVRERDLDE 251 PP RE R EE + D D +RE+ RER R+ D +E Sbjct: 603 PPHRE-----RINEEEDRERDEERDIERERERERERDEDDEE 639
>FIP1_BRARE (Q5XJD3) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-like 1)| Length = 570 Score = 30.4 bits (67), Expect = 3.0 Identities = 16/41 (39%), Positives = 22/41 (53%) Frame = +3 Query: 126 PPAREAPSVGRPRSEEPKRGDSRVDRDREKSRERVRERDLD 248 PP + A + E PK+ D RD+E+ +ER RER D Sbjct: 414 PPMQGAVNPWPGLMENPKQWDYYPRRDKEREKERERERQRD 454
>PO3F1_RAT (P20267) POU domain, class 3, transcription factor 1| (Octamer-binding transcription factor 6) (Oct-6) (POU-domain transcription factor SCIP) (Tst-1) Length = 451 Score = 30.4 bits (67), Expect = 3.0 Identities = 15/36 (41%), Positives = 17/36 (47%) Frame = -3 Query: 456 HGDDHERDHDPSPYRDPYHGPYPYLCPDDHGHGHAH 349 H D HE +PSP P+L H HGHAH Sbjct: 192 HEDGHEAQLEPSPP--------PHLGAHGHAHGHAH 219
>HYPB_BRAJA (Q45257) Hydrogenase nickel incorporation protein hypB| Length = 302 Score = 30.4 bits (67), Expect = 3.0 Identities = 18/55 (32%), Positives = 24/55 (43%) Frame = -3 Query: 513 RGHVRNLHAHHLSHDPCLSHGDDHERDHDPSPYRDPYHGPYPYLCPDDHGHGHAH 349 + + + H HH HD HG DH+ HD + +HG DH H H H Sbjct: 11 KASIEHAHDHH--HD----HGHDHDHGHD--GHHHHHHGH-----DQDHHHHHDH 52
>PO3F1_HUMAN (Q03052) POU domain, class 3, transcription factor 1| (Octamer-binding transcription factor 6) (Oct-6) (POU-domain transcription factor SCIP) Length = 448 Score = 30.4 bits (67), Expect = 3.0 Identities = 15/36 (41%), Positives = 17/36 (47%) Frame = -3 Query: 456 HGDDHERDHDPSPYRDPYHGPYPYLCPDDHGHGHAH 349 H D HE +PSP P+L H HGHAH Sbjct: 189 HEDGHEAQLEPSPP--------PHLGAHGHAHGHAH 216
>DHX8_HUMAN (Q14562) ATP-dependent RNA helicase DHX8 (EC 3.6.1.-) (DEAH box| protein 8) (RNA helicase HRH1) Length = 1220 Score = 30.4 bits (67), Expect = 3.0 Identities = 15/31 (48%), Positives = 22/31 (70%) Frame = +3 Query: 156 RPRSEEPKRGDSRVDRDREKSRERVRERDLD 248 R R+++ KR SR DR+R++ R+R R RD D Sbjct: 168 RDRTKKKKRSRSR-DRNRDRDRDRERNRDRD 197
>BX42_DROME (P39736) Puff-specific protein Bx42| Length = 547 Score = 30.4 bits (67), Expect = 3.0 Identities = 16/44 (36%), Positives = 22/44 (50%) Frame = +3 Query: 120 QKPPAREAPSVGRPRSEEPKRGDSRVDRDREKSRERVRERDLDE 251 + P A E G SE +R D R +R RE+ R+R +R E Sbjct: 342 RNPEAAEPSGSGATGSEVRERNDLRAERQRERQRDRNLQRAAPE 385
>RED_MOUSE (Q9Z1M8) Protein Red (Protein RER) (IK factor) (Cytokine IK)| Length = 557 Score = 30.4 bits (67), Expect = 3.0 Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 16/66 (24%) Frame = +3 Query: 105 GASADQKPPARE----------APSVGR-PRSEEPKR-----GDSRVDRDREKSRERVRE 236 G ++KPP + PS + PR +E +R D DRDRE+ RER RE Sbjct: 304 GKLEEKKPPEADMNIFEDIGDYVPSTTKTPRDKERERYRERERDRERDRDRERDRERDRE 363 Query: 237 RDLDEN 254 R+ + + Sbjct: 364 RERERD 369
>IF3A_CAEEL (P34339) Probable eukaryotic translation initiation factor 3 subunit| 10 (eIF-3 theta) (eIF3a) (Egg-laying defective protein 45) Length = 1076 Score = 30.0 bits (66), Expect = 3.9 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = +3 Query: 126 PPAREAPSVGRPRSEEPKR 182 PP +APSV P+SE PKR Sbjct: 979 PPKTDAPSVSEPKSEGPKR 997
>STC_DROME (P40798) Protein shuttle craft| Length = 1106 Score = 30.0 bits (66), Expect = 3.9 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = +3 Query: 156 RPRSEEPKRGDSRVDRDREKSRERVRERDLDENP 257 R R + R R DRDR++ R+R R+RD D P Sbjct: 239 RERDRDRDRERDR-DRDRDRDRDRDRDRDRDSRP 271
>FOXGA_HUMAN (P55316) Forkhead box protein G1A (Forkhead-related protein FKHL2)| (Transcription factor BF-2) (Brain factor 2) (BF2) (HFK2) Length = 469 Score = 30.0 bits (66), Expect = 3.9 Identities = 12/29 (41%), Positives = 12/29 (41%) Frame = -3 Query: 492 HAHHLSHDPCLSHGDDHERDHDPSPYRDP 406 H HH SH P H H H P P P Sbjct: 37 HGHHNSHHPQHHHHHHHHHHHPPPPAPQP 65
>UREE_NATPD (Q3IRZ1) Urease accessory protein ureE| Length = 214 Score = 30.0 bits (66), Expect = 3.9 Identities = 15/48 (31%), Positives = 21/48 (43%) Frame = -3 Query: 492 HAHHLSHDPCLSHGDDHERDHDPSPYRDPYHGPYPYLCPDDHGHGHAH 349 H+H + D +G+DH+ DH D H DH H H+H Sbjct: 171 HSHEAT-DSGHGYGEDHDHDHSHDHNHDHDHN-------HDHDHSHSH 210
>FOXGB_HUMAN (P55315) Forkhead box protein G1B (Forkhead-related protein FKHL1)| (Transcription factor BF-1) (Brain factor 1) (BF1) (HFK1) Length = 477 Score = 30.0 bits (66), Expect = 3.9 Identities = 12/29 (41%), Positives = 12/29 (41%) Frame = -3 Query: 492 HAHHLSHDPCLSHGDDHERDHDPSPYRDP 406 H HH SH P H H H P P P Sbjct: 37 HGHHNSHHPQHHHHHHHHHHHPPPPAPQP 65
>SLOU_DROME (P22807) Homeobox protein slou (S59/2) (Protein slouch) (Homeobox| protein NK-1) Length = 659 Score = 30.0 bits (66), Expect = 3.9 Identities = 16/62 (25%), Positives = 22/62 (35%) Frame = -3 Query: 492 HAHHLSHDPCLSHGDDHERDHDPSPYRDPYHGPYPYLCPDDHGHGHAHXXXXXXXXXPCP 313 H H L + L+ H H ++ P H P+ + P H H H H P Sbjct: 185 HPHLLQNPQFLAAAQQHMHHHQHQHHQHPAH-PHSHQHPHPHPHPHPHPHPSAVFHLRAP 243 Query: 312 ES 307 S Sbjct: 244 SS 245
>PHLA1_HUMAN (Q8WV24) Pleckstrin homology-like domain family A member 1 (T-cell| death-associated gene 51 protein) (Apoptosis-associated nuclear protein) (Proline- and histidine-rich protein) (Proline- and glutamine-rich protein) (PQ-rich protein) Length = 259 Score = 30.0 bits (66), Expect = 3.9 Identities = 14/44 (31%), Positives = 18/44 (40%) Frame = -3 Query: 486 HHLSHDPCLSHGDDHERDHDPSPYRDPYHGPYPYLCPDDHGHGH 355 H H H H H P P+ P+ P+P+ P HGH Sbjct: 207 HPYPHPHPHPHSHPHSHPH-PHPHPHPHQIPHPHPQPHSQPHGH 249
>PRP28_GIBZE (Q4I7F9) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 721 Score = 29.6 bits (65), Expect = 5.1 Identities = 14/28 (50%), Positives = 17/28 (60%) Frame = +3 Query: 159 PRSEEPKRGDSRVDRDREKSRERVRERD 242 PRS R D DRDR++ R RVR +D Sbjct: 84 PRSMNDGRDDRERDRDRDQGRGRVRGKD 111
>PHF3_HUMAN (Q92576) PHD finger protein 3| Length = 2039 Score = 29.6 bits (65), Expect = 5.1 Identities = 14/39 (35%), Positives = 26/39 (66%) Frame = +3 Query: 132 AREAPSVGRPRSEEPKRGDSRVDRDREKSRERVRERDLD 248 +R++ +V + + ++PK D D++REKS+ R E+D D Sbjct: 1986 SRDSRNVDK-KPDKPKSEDYEKDKEREKSKHREGEKDRD 2023
>ACINU_MOUSE (Q9JIX8) Apoptotic chromatin condensation inducer in the nucleus| (Acinus) Length = 1338 Score = 29.6 bits (65), Expect = 5.1 Identities = 15/29 (51%), Positives = 19/29 (65%) Frame = +3 Query: 156 RPRSEEPKRGDSRVDRDREKSRERVRERD 242 R R E RGD +R+RE+ R+R RERD Sbjct: 1288 RDRERERDRGDR--ERERERDRDRGRERD 1314
>LOZEN_DROME (Q9W349) Protein lozenge| Length = 826 Score = 29.6 bits (65), Expect = 5.1 Identities = 15/46 (32%), Positives = 19/46 (41%) Frame = -3 Query: 492 HAHHLSHDPCLSHGDDHERDHDPSPYRDPYHGPYPYLCPDDHGHGH 355 H HHL H + P + PYH P+P+ P H H H Sbjct: 108 HHHHLHHH------------YSPYHHAHPYHPPHPH-APHHHHHHH 140
>KDSB_ECOL6 (Q8FJA9) 3-deoxy-manno-octulosonate cytidylyltransferase (EC| 2.7.7.38) (CMP-KDO synthetase) (CMP-2-keto-3-deoxyoctulosonic acid synthetase) (CKS) Length = 247 Score = 29.6 bits (65), Expect = 5.1 Identities = 14/45 (31%), Positives = 25/45 (55%) Frame = +1 Query: 61 VPGD*AVDLDQAEFVVQVLTRSRLPGRHRVLGAPDQKNLRGVIPV 195 +PG VD++ +V VL R+R G R++ A D +++ + V Sbjct: 15 LPGKPLVDINGKPMIVHVLERARESGAERIIVATDHEDVARAVEV 59
>NGN1_HUMAN (Q92886) Neurogenin 1 (Neurogenic differentiation factor 3)| (NeuroD3) (Neurogenic basic-helix-loop-helix protein) Length = 237 Score = 29.6 bits (65), Expect = 5.1 Identities = 18/46 (39%), Positives = 22/46 (47%) Frame = +3 Query: 108 ASADQKPPAREAPSVGRPRSEEPKRGDSRVDRDREKSRERVRERDL 245 AS P R AP++ R SE P D +R R + R RVR L Sbjct: 41 ASGPPAPARRGAPNISRA-SEVPGAQDDEQERRRRRGRTRVRSEAL 85
>UREE_RHILO (Q98CZ2) Urease accessory protein ureE| Length = 196 Score = 29.6 bits (65), Expect = 5.1 Identities = 22/79 (27%), Positives = 27/79 (34%) Frame = -3 Query: 420 PYRDPYHGPYPYLCPDDHGHGHAHXXXXXXXXXPCPESCPDLYGGASLPLNHAHGDFHRG 241 P R Y G + DHGH HAH +HAHG+ H Sbjct: 148 PVRGAYSGGH------DHGHAHAHSHAEAH--------------------SHAHGESHS- 180 Query: 240 LFPVPSHETSPDPYLHGNH 184 SH S D + H +H Sbjct: 181 ----HSHSHSHDDHHHHDH 195
>DIDO1_MOUSE (Q8C9B9) Death-inducer obliterator 1 (DIO-1) (Death-associated| transcription factor 1) (DATF-1) (Fragments) Length = 1956 Score = 29.6 bits (65), Expect = 5.1 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%) Frame = +3 Query: 147 SVGRPRSEEPKRGDSRV-DRDREKSRERVRERDLD 248 S R R E +R R RDR++ RER R+RD D Sbjct: 1888 SRNRDRDRERRRDRDRSRSRDRDRDRERARDRDRD 1922
>PRP5_CRYNE (Q5KME7) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 1072 Score = 29.3 bits (64), Expect = 6.7 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%) Frame = +3 Query: 135 REAPSVGRPRSEEPK--RGDSRVDRDREKSRERVRERDLD 248 R PS R ++ K R D RDRE+ RER R+R D Sbjct: 23 RSHPSSSSRRQDDRKASRYDDDYSRDRERDRERERDRTRD 62
>K0182_HUMAN (Q14687) Protein KIAA0182 (Fragment)| Length = 1157 Score = 29.3 bits (64), Expect = 6.7 Identities = 14/32 (43%), Positives = 21/32 (65%) Frame = +3 Query: 156 RPRSEEPKRGDSRVDRDREKSRERVRERDLDE 251 R R E +R + DR+REK RER RE++ ++ Sbjct: 281 RERERERER-EREADREREKEREREREKEREQ 311
>GLU2B_BOVIN (Q28034) Glucosidase 2 beta subunit precursor (Glucosidase II beta| subunit) (Protein kinase C substrate, 60.1 kDa protein, heavy chain) (PKCSH) (80K-H protein) (Vacuolar system-associated protein 60) (VASAP-60) Length = 533 Score = 29.3 bits (64), Expect = 6.7 Identities = 13/42 (30%), Positives = 19/42 (45%) Frame = +3 Query: 126 PPAREAPSVGRPRSEEPKRGDSRVDRDREKSRERVRERDLDE 251 PP+ AP V P+ E+P + + E + E D DE Sbjct: 289 PPSPPAPDVMEPKEEQPPMPSPPTEEEDEDEEDEETEEDEDE 330
>E74EB_DROME (P11536) Ecdysone-induced protein 74EF isoform B (ETS-related| protein E74B) Length = 883 Score = 29.3 bits (64), Expect = 6.7 Identities = 11/38 (28%), Positives = 16/38 (42%) Frame = -3 Query: 462 LSHGDDHERDHDPSPYRDPYHGPYPYLCPDDHGHGHAH 349 LSH ++ +GP+P+ P H H H H Sbjct: 648 LSHQQQQQQQQQQQHPHSQLNGPHPHSHPHSHPHSHPH 685
>E74EA_DROME (P20105) Ecdysone-induced protein 74EF isoform A (ETS-related| protein E74A) Length = 829 Score = 29.3 bits (64), Expect = 6.7 Identities = 11/38 (28%), Positives = 16/38 (42%) Frame = -3 Query: 462 LSHGDDHERDHDPSPYRDPYHGPYPYLCPDDHGHGHAH 349 LSH ++ +GP+P+ P H H H H Sbjct: 594 LSHQQQQQQQQQQQHPHSQLNGPHPHSHPHSHPHSHPH 631
>UREE_YERMO (Q6UR41) Urease accessory protein ureE| Length = 230 Score = 29.3 bits (64), Expect = 6.7 Identities = 11/32 (34%), Positives = 16/32 (50%) Frame = -3 Query: 507 HVRNLHAHHLSHDPCLSHGDDHERDHDPSPYR 412 HV +H+H H SH DH+ HD ++ Sbjct: 198 HVHAIHSHGDGHSHSHSHDHDHDHRHDDHDHK 229 Score = 28.9 bits (63), Expect = 8.7 Identities = 17/51 (33%), Positives = 18/51 (35%) Frame = -3 Query: 507 HVRNLHAHHLSHDPCLSHGDDHERDHDPSPYRDPYHGPYPYLCPDDHGHGH 355 H LH H + SHGD H H D H DDH H H Sbjct: 193 HGSGLHVHAIH-----SHGDGHSHSHSHDHDHDHRH--------DDHDHKH 230
>YATE_SCHPO (Q09779) Hypothetical protein C1D4.14 in chromosome I| Length = 1628 Score = 29.3 bits (64), Expect = 6.7 Identities = 15/43 (34%), Positives = 21/43 (48%) Frame = +3 Query: 111 SADQKPPAREAPSVGRPRSEEPKRGDSRVDRDREKSRERVRER 239 S+D + P+ R S R D R DRD + R+R R+R Sbjct: 1572 SSDSQSPSNLREEDERENSRRRARQDDRRDRDSRQQRDRPRDR 1614
>UREE_YERIN (Q6UR59) Urease accessory protein ureE| Length = 226 Score = 29.3 bits (64), Expect = 6.7 Identities = 19/53 (35%), Positives = 20/53 (37%) Frame = -3 Query: 507 HVRNLHAHHLSHDPCLSHGDDHERDHDPSPYRDPYHGPYPYLCPDDHGHGHAH 349 H LH H + SHGD H DHD S HG DH H H Sbjct: 193 HGSGLHIHSIH-----SHGDGHSHDHDHS------HG--------DHDSDHKH 226
>MAGI1_MOUSE (Q6RHR9) Membrane-associated guanylate kinase, WW and PDZ| domain-containing protein 1 (BAI1-associated protein 1) (BAP-1) (Membrane-associated guanylate kinase inverted 1) (MAGI-1) Length = 1471 Score = 29.3 bits (64), Expect = 6.7 Identities = 15/32 (46%), Positives = 18/32 (56%) Frame = +3 Query: 156 RPRSEEPKRGDSRVDRDREKSRERVRERDLDE 251 R R P+R DR R +S ER RER LD+ Sbjct: 1395 RRRGGSPERRAKSTDRRRARSPERRRERSLDK 1426
>MAGI1_HUMAN (Q96QZ7) Membrane-associated guanylate kinase, WW and PDZ| domain-containing protein 1 (BAI1-associated protein 1) (BAP-1) (Membrane-associated guanylate kinase inverted 1) (MAGI-1) (Atrophin-1-interacting protein 3) (AIP3) (WW domain-containi Length = 1491 Score = 29.3 bits (64), Expect = 6.7 Identities = 15/32 (46%), Positives = 18/32 (56%) Frame = +3 Query: 156 RPRSEEPKRGDSRVDRDREKSRERVRERDLDE 251 R R P+R DR R +S ER RER LD+ Sbjct: 1415 RRRGGSPERRAKSTDRRRARSPERRRERSLDK 1446
>SKN1_CANAL (P87024) Beta-glucan synthesis-associated protein SKN1| Length = 737 Score = 28.9 bits (63), Expect = 8.7 Identities = 19/69 (27%), Positives = 23/69 (33%), Gaps = 3/69 (4%) Frame = -3 Query: 378 PDDHGHGHAHXXXXXXXXXPCPESCPDLY---GGASLPLNHAHGDFHRGLFPVPSHETSP 208 P H + P+S DL G P G + LFP+ E P Sbjct: 192 PSQQQQQHMYDNNSSNRSSYSPDSATDLMVYENGEFSPF----GGYPASLFPLSIDEKEP 247 Query: 207 DPYLHGNHP 181 D YLH P Sbjct: 248 DDYLHNPDP 256
>GBF2_ARATH (P42775) G-box-binding factor 2 (AtbZIP54)| Length = 360 Score = 28.9 bits (63), Expect = 8.7 Identities = 11/24 (45%), Positives = 12/24 (50%) Frame = -3 Query: 426 PSPYRDPYHGPYPYLCPDDHGHGH 355 PSP PY PYP CP + H Sbjct: 69 PSPMMAPYGAPYPPFCPPGGVYAH 92
>HBP1A_WHEAT (P23922) Transcription factor HBP-1a (Histone-specific| transcription factor HBP1) Length = 349 Score = 28.9 bits (63), Expect = 8.7 Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 1/61 (1%) Frame = -3 Query: 312 ESCPDLYGGASLPLNHAHGDFHRGLFPVPSHETSPDPYLHGN-HPS*VLLIWGAQHSVPP 136 E P G + P+ F +G +P H P P G HP +WG QH VPP Sbjct: 19 EQPPATTSGTTAPVYPEWPGF-QGYPAMPPHGFFPPPVAAGQAHP----YMWGPQHMVPP 73 Query: 135 W 133 + Sbjct: 74 Y 74
>CCNT_DROME (O96433) Cyclin-T| Length = 1097 Score = 28.9 bits (63), Expect = 8.7 Identities = 14/19 (73%), Positives = 16/19 (84%) Frame = +3 Query: 186 DSRVDRDREKSRERVRERD 242 DSR DRDR++ RER RERD Sbjct: 332 DSR-DRDRDRERERERERD 349
>YTDC1_RAT (Q9QY02) YTH domain-containing protein 1 (Putative splicing factor| YT521) (RA301-binding protein) Length = 738 Score = 28.9 bits (63), Expect = 8.7 Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 5/34 (14%) Frame = +3 Query: 156 RPRSEEPKRG-----DSRVDRDREKSRERVRERD 242 RPR + +R D+R DR+R++ R+R RER+ Sbjct: 688 RPRERDRERERDRPRDNRRDRERDRGRDRERERE 721
>PHLA1_MOUSE (Q62392) Pleckstrin homology-like domain family A member 1 (T-cell| death-associated gene 51 protein) (Proline- and glutamine-rich protein) (PQR protein) Length = 261 Score = 28.9 bits (63), Expect = 8.7 Identities = 10/26 (38%), Positives = 14/26 (53%) Frame = -3 Query: 426 PSPYRDPYHGPYPYLCPDDHGHGHAH 349 P PY P+ P+P+ P H H H + Sbjct: 210 PHPYSHPHQHPHPHPHPHPHPHPHPY 235
>KNG1_RAT (P08934) Kininogen-1 precursor [Contains: Kininogen-1 heavy chain;| Bradykinin; Kininogen-1 light chain] Length = 639 Score = 28.9 bits (63), Expect = 8.7 Identities = 14/55 (25%), Positives = 19/55 (34%) Frame = -3 Query: 513 RGHVRNLHAHHLSHDPCLSHGDDHERDHDPSPYRDPYHGPYPYLCPDDHGHGHAH 349 + H + H H + H HG H + Y + P HGHG H Sbjct: 437 KNHQGHKHGHGIGHGHQKPHGLGHGHQLKLDDLKQQREDGYDHRHPVGHGHGQRH 491
>BRE1A_CHICK (Q5ZLS3) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (RING| finger protein 20) Length = 984 Score = 28.9 bits (63), Expect = 8.7 Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%) Frame = +3 Query: 132 AREAPSVGRPRSEEPKRGDSRV-DRDREKSRERVRERDLDE 251 + EA V R EE + + R +R+REK +E+ RER+ ++ Sbjct: 554 SEEASEVKARRDEEERERERREREREREKEKEKEREREKEK 594 Score = 28.9 bits (63), Expect = 8.7 Identities = 13/40 (32%), Positives = 25/40 (62%) Frame = +3 Query: 132 AREAPSVGRPRSEEPKRGDSRVDRDREKSRERVRERDLDE 251 A E S + R +E +R R +R+RE+ +E+ +ER+ ++ Sbjct: 553 ASEEASEVKARRDEEERERERREREREREKEKEKEREREK 592
>ZN553_MOUSE (Q3US17) Zinc finger protein 553| Length = 591 Score = 28.9 bits (63), Expect = 8.7 Identities = 31/115 (26%), Positives = 38/115 (33%), Gaps = 13/115 (11%) Frame = -3 Query: 483 HLSHDP--CLSHGDDHERDHDPSPYRDPYHGPYPYLCPD---DHGHGHAHXXXXXXXXXP 319 HL P C G + R D + + G PYLCP+ A Sbjct: 268 HLGPKPFGCDVCGKEFARGSDLVKHLRVHTGEKPYLCPECGKGFADSSARVKHLRTHSGQ 327 Query: 318 CPESCPDLYGGASLP-------LNHAH-GDFHRGLFPVPSHETSPDPYLHGNHPS 178 P +CP+ SL L H DF +PV SP P G PS Sbjct: 328 RPHACPECNRSFSLSSTLLRHRLTHVEPQDFSLAAYPVVPLIPSPPPPPLGTSPS 382
>EGGS_SCHMA (P08016) Putative eggshell protein (Fragment)| Length = 149 Score = 28.9 bits (63), Expect = 8.7 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%) Frame = -3 Query: 459 SHGDDHER-DHDPSPYRDPYHGPYPYLCPDDHGHGHAH 349 S+ DH++ DHD + D +H + DH H H H Sbjct: 104 SYRKDHDKHDHDEHDHHDDHHDHRHHHHEHDHHHHHEH 141
>YTDC1_HUMAN (Q96MU7) YTH domain-containing protein 1 (Putative splicing factor| YT521) Length = 727 Score = 28.9 bits (63), Expect = 8.7 Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 5/34 (14%) Frame = +3 Query: 156 RPRSEEPKRG-----DSRVDRDREKSRERVRERD 242 RPR + +R D+R DR+R++ R+R RER+ Sbjct: 677 RPRERDRERERDRPRDNRRDRERDRGRDRERERE 710
>RED_HUMAN (Q13123) Protein Red (Protein RER) (IK factor) (Cytokine IK)| Length = 557 Score = 28.9 bits (63), Expect = 8.7 Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 18/68 (26%) Frame = +3 Query: 105 GASADQKPPARE----------APSVGR-PRSEEPKRGDSRV-------DRDREKSRERV 230 G ++KPP + PS + PR +E +R R DRDRE+ RER Sbjct: 304 GKLEEKKPPEADMNIFEDIGDYVPSTTKTPRDKERERYRERERDRERDRDRDRERERERD 363 Query: 231 RERDLDEN 254 RER+ + + Sbjct: 364 RERERERD 371
>BRC4_DROME (Q24206) Broad-complex core-protein isoform 6| Length = 880 Score = 28.9 bits (63), Expect = 8.7 Identities = 18/46 (39%), Positives = 24/46 (52%) Frame = +3 Query: 111 SADQKPPAREAPSVGRPRSEEPKRGDSRVDRDREKSRERVRERDLD 248 S+ P A + P + KR R +R+RE+ RER RER LD Sbjct: 526 SSQGMPDAGGHSATPSPTAAYHKRERER-ERERERERERERERSLD 570
>DHX15_MOUSE (O35286) Putative pre-mRNA-splicing factor ATP-dependent RNA| helicase DHX15 (EC 3.6.1.-) (DEAH box protein 15) Length = 795 Score = 28.9 bits (63), Expect = 8.7 Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Frame = +3 Query: 135 REAPSVGRPRSEEPKRGDSRVDRDREKSR-ERVRERDLDE 251 + A + G+ R + R D DRDRE+ R +R RER+ ++ Sbjct: 18 KRAGTDGKDRERDRDREDRSKDRDRERDRGDREREREKEK 57
>DHX15_HUMAN (O43143) Putative pre-mRNA-splicing factor ATP-dependent RNA| helicase DHX15 (EC 3.6.1.-) (DEAH box protein 15) (ATP-dependent RNA helicase #46) Length = 795 Score = 28.9 bits (63), Expect = 8.7 Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Frame = +3 Query: 135 REAPSVGRPRSEEPKRGDSRVDRDREKSR-ERVRERDLDE 251 + A + G+ R + R D DRDRE+ R +R RER+ ++ Sbjct: 18 KRAGTDGKDRDRDRDREDRSKDRDRERDRGDREREREKEK 57
>ZNUA_ECOLI (P39172) High-affinity zinc uptake system protein znuA precursor| Length = 310 Score = 26.2 bits (56), Expect(2) = 8.8 Identities = 9/22 (40%), Positives = 12/22 (54%) Frame = -3 Query: 456 HGDDHERDHDPSPYRDPYHGPY 391 HGDD + DH D +HG + Sbjct: 119 HGDDDDHDHAEKSDEDHHHGDF 140 Score = 21.2 bits (43), Expect(2) = 8.8 Identities = 9/27 (33%), Positives = 14/27 (51%) Frame = -3 Query: 270 NHAHGDFHRGLFPVPSHETSPDPYLHG 190 +H HGDF+ L+ P + +HG Sbjct: 134 DHHHGDFNMHLWLSPEIARATAVAIHG 160 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,636,357 Number of Sequences: 219361 Number of extensions: 1300984 Number of successful extensions: 5746 Number of sequences better than 10.0: 110 Number of HSP's better than 10.0 without gapping: 4085 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5074 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3869946934 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
