>YE25_CAEEL (Q20593) Hypothetical protein F49C12.5|
          Length = 507

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 21/74 (28%), Positives = 35/74 (47%)
 Frame = +2

Query: 197 GSARIPKRRRTTKASEAADRQLREGQFPDLNLLPVVEALNTGGSLSINEPVSHRQPPPMV 376
           G++ IP + R  KA   +       +    N L +V ++N     S NE   H  PP +V
Sbjct: 34  GTSPIPVKERPLKAFITSAYYYSSSKSLGKNALALVMSINL--VKSPNELAQHPNPPELV 91

Query: 377 VSLGYETTQVVVSS 418
           +S   +TT ++V +
Sbjct: 92  ISAENDTTSIMVKT 105

>GCST_PHOLL (Q7N197) Aminomethyltransferase (EC 2.1.2.10) (Glycine cleavage|
           system T protein)
          Length = 364

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
 Frame = +2

Query: 371 MVVSLGYETTQVVVSSAA-----AGSNIGMNSFPINVEVIDDDVAIYTSGPPPQARQQSS 535
           +V  L  +  ++VV+SA      A  N  + ++P++++V DD   I   GP  QA+ +S 
Sbjct: 100 IVYYLSNDFYRLVVNSATREKDLAWINEHVANYPVDIQVRDDLALIAVQGPDAQAKVES- 158

Query: 536 RTGPITVIIDDDSETTAG 589
                 ++ D+  +T AG
Sbjct: 159 ------LLNDEQKQTIAG 170

>FMT_WOLPM (Q73GR6) Methionyl-tRNA formyltransferase (EC 2.1.2.9)|
          Length = 299

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = +2

Query: 443 MNSFPINVEVIDDDVAIYTSGPPPQARQQSSRTGPITVIIDDDSETTAGP 592
           +NS  + ++   + VA+YT  P P  R Q     P+ VI ++ +     P
Sbjct: 13  VNSLSLLLKSKSEVVAVYTKAPKPSGRGQKPTKSPVHVIAEESNIEVCTP 62

>CG029_HUMAN (Q96FA7) Protein C7orf29|
          Length = 236

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
 Frame = -2

Query: 304 NHWKQVQVRKLSLPKLSVCSLRRLGSPSPLWNP---C--RTSRAHAAAMKPQA*GKPIE 143
           +HWKQV V K+   ++S  S   L SPSPL +P   C   T  A ++ ++ ++ G+P++
Sbjct: 97  DHWKQVLVYKVKEIRVSEYS---LNSPSPLQSPRGLCVDPTRVAKSSGVEGRSQGEPLQ 152

>ATS17_HUMAN (Q8TE56) ADAMTS-17 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase with thrombospondin motifs 17)
           (ADAM-TS 17) (ADAM-TS17)
          Length = 1095

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 17/41 (41%), Positives = 20/41 (48%)
 Frame = -1

Query: 401 VWSRNPG*PP*EGAACVRQAH*WRVNPQY*VLQPLEASSGP 279
           VW  +PG    + AA V     WRV P    L PL A+ GP
Sbjct: 19  VWGLDPGTAVGDAAADVEVVLPWRVRPDDVHLPPLPAAPGP 59

>RL6_HALSA (Q9HPB8) 50S ribosomal protein L6P (HL10)|
          Length = 177

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = +2

Query: 452 FPINVEVIDDDVAIYTSGPPPQARQQSSRTGPITVIIDDDSETTAGPAGE 601
           FP+ V+V  ++V I        AR+   R G   V++DD+  T +GP+ E
Sbjct: 91  FPMQVDVEGEEVVIQNFLGEKAARRTQIR-GDTDVVVDDEEVTLSGPSIE 139

>SC5A1_SHEEP (P53791) Sodium/glucose cotransporter 1 (Na(+)/glucose|
           cotransporter 1) (High affinity sodium-glucose
           cotransporter)
          Length = 664

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +1

Query: 154 FLKPVASSRQHELCWFCKDSKEE 222
           F KP+A    + LCW  ++SKEE
Sbjct: 547 FTKPIADVHLYRLCWSLRNSKEE 569

>CCNA2_MOUSE (P51943) Cyclin-A2 (Cyclin-A)|
          Length = 422

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = +2

Query: 503 GPPPQARQQSSRTGPITVIIDDDSETTAGPAGEALDE 613
           GP PQ + ++ R  P+  +  +D   TAGP+ +A+ +
Sbjct: 51  GPAPQQKLKTRRVAPLKDLPINDEHVTAGPSWKAVSK 87

>RR19_PORPU (P51310) Chloroplast 30S ribosomal protein S19|
          Length = 92

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
 Frame = +2

Query: 254 RQLREGQFPDLNLLPVVEALNTGGSLSINEPVSHRQP--PPMV-----VSLGYETTQVVV 412
           R + +G F D++LL  +EALNT G   + +  S      P M+     V  G +   V V
Sbjct: 3   RSIHKGPFIDVSLLTRIEALNTSGKKEVIKTWSRASTIIPDMIGHTIAVYNGKQHFPVFV 62

Query: 413 SSAAAGSNIG 442
           S    G  +G
Sbjct: 63  SDQMVGHKLG 72


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,073,441
Number of Sequences: 219361
Number of extensions: 2036721
Number of successful extensions: 5535
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5531
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6029593548
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)