ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd26m08 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1183 bits (597), Expect = 0.0 Identities = 602/604 (99%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120042 cctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 119983 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119982 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 119923 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119922 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 119863 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119862 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 119803 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119802 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 119743 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 119742 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 119683 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119682 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 119623 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119622 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 119563 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119562 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 119503 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119502 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 119443 Query: 613 cgga 616 |||| Sbjct: 119442 cgga 119439 Score = 1183 bits (597), Expect = 0.0 Identities = 602/604 (99%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94852 cctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 94911 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94912 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 94971 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94972 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 95031 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95032 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 95091 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95092 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 95151 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 95152 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 95211 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95212 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 95271 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95272 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 95331 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95332 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 95391 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95392 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 95451 Query: 613 cgga 616 |||| Sbjct: 95452 cgga 95455
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1168 bits (589), Expect = 0.0 Identities = 600/604 (99%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118823 cctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 118764 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 118763 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 118704 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118703 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 118644 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118643 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 118584 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118583 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 118524 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 118523 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 118464 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118463 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 118404 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118403 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 118344 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118343 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 118284 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118283 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 118224 Query: 613 cgga 616 |||| Sbjct: 118223 cgga 118220
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 1168 bits (589), Expect = 0.0 Identities = 597/600 (99%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 953 cctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 894 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 893 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 834 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 833 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 774 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 773 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 714 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 654 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 653 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 594 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 593 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 534 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 533 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 474 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 473 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 414 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 413 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 354
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1168 bits (589), Expect = 0.0 Identities = 600/604 (99%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119907 cctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 119848 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 119847 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 119788 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119787 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 119728 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119727 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 119668 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119667 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 119608 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 119607 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 119548 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119547 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 119488 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119487 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 119428 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119427 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 119368 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119367 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 119308 Query: 613 cgga 616 |||| Sbjct: 119307 cgga 119304 Score = 1168 bits (589), Expect = 0.0 Identities = 600/604 (99%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95249 cctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 95308 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 95309 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 95368 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95369 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 95428 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95429 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 95488 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95489 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 95548 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 95549 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 95608 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95609 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 95668 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95669 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 95728 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95729 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 95788 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95789 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 95848 Query: 613 cgga 616 |||| Sbjct: 95849 cgga 95852
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1168 bits (589), Expect = 0.0 Identities = 600/604 (99%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119907 cctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 119848 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 119847 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 119788 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119787 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 119728 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119727 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 119668 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119667 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 119608 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 119607 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 119548 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119547 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 119488 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119487 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 119428 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119427 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 119368 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119367 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 119308 Query: 613 cgga 616 |||| Sbjct: 119307 cgga 119304 Score = 1168 bits (589), Expect = 0.0 Identities = 600/604 (99%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95249 cctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 95308 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 95309 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 95368 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95369 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 95428 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95429 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 95488 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95489 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 95548 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 95549 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 95608 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95609 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 95668 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95669 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 95728 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95729 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 95788 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95789 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 95848 Query: 613 cgga 616 |||| Sbjct: 95849 cgga 95852
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1168 bits (589), Expect = 0.0 Identities = 600/604 (99%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119856 cctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 119797 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 119796 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 119737 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119736 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 119677 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119676 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 119617 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119616 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 119557 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 119556 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 119497 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119496 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 119437 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119436 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 119377 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119376 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 119317 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119316 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 119257 Query: 613 cgga 616 |||| Sbjct: 119256 cgga 119253 Score = 1168 bits (589), Expect = 0.0 Identities = 600/604 (99%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95194 cctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 95253 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 95254 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 95313 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95314 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 95373 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95374 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 95433 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95434 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 95493 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 95494 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 95553 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95554 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 95613 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95614 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 95673 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95674 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 95733 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95734 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 95793 Query: 613 cgga 616 |||| Sbjct: 95794 cgga 95797
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1168 bits (589), Expect = 0.0 Identities = 600/604 (99%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507827 cctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 31507886 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 31507887 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 31507946 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507947 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 31508006 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508007 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 31508066 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508067 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 31508126 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 31508127 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 31508186 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508187 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 31508246 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508247 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 31508306 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508307 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 31508366 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508367 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 31508426 Query: 613 cgga 616 |||| Sbjct: 31508427 cgga 31508430
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1168 bits (589), Expect = 0.0 Identities = 600/604 (99%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84769 cctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 84710 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 84709 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 84650 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84649 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 84590 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84589 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 84530 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84529 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 84470 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 84469 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 84410 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84409 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 84350 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84349 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 84290 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84289 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 84230 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84229 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 84170 Query: 613 cgga 616 |||| Sbjct: 84169 cgga 84166
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1168 bits (589), Expect = 0.0 Identities = 600/604 (99%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119876 cctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 119817 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 119816 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 119757 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119756 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 119697 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119696 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 119637 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119636 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 119577 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 119576 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 119517 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119516 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 119457 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119456 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 119397 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119396 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 119337 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119336 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 119277 Query: 613 cgga 616 |||| Sbjct: 119276 cgga 119273 Score = 1168 bits (589), Expect = 0.0 Identities = 600/604 (99%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95242 cctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 95301 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 95302 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 95361 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95362 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 95421 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95422 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 95481 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95482 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 95541 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 95542 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 95601 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95602 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 95661 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95662 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 95721 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95722 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 95781 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95782 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 95841 Query: 613 cgga 616 |||| Sbjct: 95842 cgga 95845
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1168 bits (589), Expect = 0.0 Identities = 600/604 (99%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122291 cctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 122350 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 122351 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 122410 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122411 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 122470 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122471 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 122530 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122531 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 122590 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 122591 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 122650 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122651 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 122710 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122711 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 122770 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122771 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 122830 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122831 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 122890 Query: 613 cgga 616 |||| Sbjct: 122891 cgga 122894 Score = 1160 bits (585), Expect = 0.0 Identities = 599/604 (99%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14016 cctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 14075 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 14076 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 14135 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14136 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 14195 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14196 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 14255 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14256 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 14315 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 14316 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 14375 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 14376 atggggcacgtggaatcctgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 14435 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14436 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 14495 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14496 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 14555 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14556 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 14615 Query: 613 cgga 616 |||| Sbjct: 14616 cgga 14619
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1168 bits (589), Expect = 0.0 Identities = 597/600 (99%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44867 cctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 44808 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 44807 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 44748 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44747 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 44688 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44687 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 44628 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44627 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 44568 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 44567 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 44508 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44507 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 44448 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44447 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 44388 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44387 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 44328 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44327 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 44268 Score = 1168 bits (589), Expect = 0.0 Identities = 597/600 (99%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20251 cctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 20310 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 20311 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 20370 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20371 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 20430 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20431 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 20490 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20491 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 20550 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 20551 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 20610 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20611 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 20670 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20671 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 20730 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20731 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 20790 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20791 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 20850
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1168 bits (589), Expect = 0.0 Identities = 600/604 (99%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58595 cctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 58536 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 58535 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 58476 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58475 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 58416 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58415 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 58356 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58355 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 58296 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 58295 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 58236 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58235 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 58176 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58175 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 58116 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58115 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 58056 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58055 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 57996 Query: 613 cgga 616 |||| Sbjct: 57995 cgga 57992
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1168 bits (589), Expect = 0.0 Identities = 597/600 (99%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1496 cctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 1437 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1436 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 1377 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1376 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 1317 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1316 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 1257 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1256 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 1197 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1196 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 1137 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1136 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 1077 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1076 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 1017 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1016 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 957 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 956 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 897
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1168 bits (589), Expect = 0.0 Identities = 600/604 (99%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268176 cctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 9268235 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 9268236 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 9268295 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268296 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 9268355 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268356 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 9268415 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268416 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 9268475 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 9268476 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 9268535 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268536 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 9268595 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268596 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 9268655 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268656 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 9268715 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268716 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 9268775 Query: 613 cgga 616 |||| Sbjct: 9268776 cgga 9268779 Score = 1168 bits (589), Expect = 0.0 Identities = 600/604 (99%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227676 cctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 9227735 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 9227736 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 9227795 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227796 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 9227855 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227856 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 9227915 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227916 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 9227975 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 9227976 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 9228035 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228036 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 9228095 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228096 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 9228155 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228156 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 9228215 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228216 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 9228275 Query: 613 cgga 616 |||| Sbjct: 9228276 cgga 9228279 Score = 1168 bits (589), Expect = 0.0 Identities = 600/604 (99%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164265 cctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 9164324 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 9164325 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 9164384 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164385 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 9164444 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164445 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 9164504 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164505 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 9164564 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 9164565 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 9164624 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164625 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 9164684 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164685 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 9164744 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164745 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 9164804 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164805 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 9164864 Query: 613 cgga 616 |||| Sbjct: 9164865 cgga 9164868 Score = 1160 bits (585), Expect = 0.0 Identities = 599/604 (99%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056090 cctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 9056149 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 9056150 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 9056209 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056210 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 9056269 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056270 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 9056329 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056330 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 9056389 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 9056390 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 9056449 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056450 atggggcacgtggaatcctgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 9056509 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056510 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 9056569 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056570 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 9056629 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056630 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 9056689 Query: 613 cgga 616 |||| Sbjct: 9056690 cgga 9056693 Score = 165 bits (83), Expect = 2e-37 Identities = 101/107 (94%) Strand = Plus / Minus Query: 435 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 494 |||||| |||||||||||||| || |||||||||||| |||||||||||||||||||||| Sbjct: 25171513 ggtgactgatagcgaagtagtgccatgagggaaaggtaaaaagaacccccagtgggtagt 25171454 Query: 495 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 541 |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 25171453 gaaatagaacatgaaaccgtgctgagctcccaagcagtggtagggga 25171407
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1168 bits (589), Expect = 0.0 Identities = 600/604 (99%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938161 cctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 19938220 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 19938221 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 19938280 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938281 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 19938340 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938341 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 19938400 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938401 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 19938460 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 19938461 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 19938520 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938521 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 19938580 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938581 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 19938640 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938641 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 19938700 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938701 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 19938760 Query: 613 cgga 616 |||| Sbjct: 19938761 cgga 19938764 Score = 1168 bits (589), Expect = 0.0 Identities = 600/604 (99%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277270 cctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 10277211 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 10277210 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 10277151 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277150 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 10277091 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277090 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 10277031 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277030 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 10276971 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 10276970 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 10276911 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276910 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 10276851 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276850 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 10276791 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276790 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 10276731 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276730 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 10276671 Query: 613 cgga 616 |||| Sbjct: 10276670 cgga 10276667 Score = 1160 bits (585), Expect = 0.0 Identities = 599/604 (99%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387028 cctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 10387087 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 10387088 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 10387147 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387148 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 10387207 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387208 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 10387267 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387268 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 10387327 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 10387328 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 10387387 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387388 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 10387447 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 10387448 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaacccccagtgggta 10387507 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387508 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 10387567 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387568 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 10387627 Query: 613 cgga 616 |||| Sbjct: 10387628 cgga 10387631 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 453 agtaccgtgagggaaaggtgaaaagaacccc 483 ||||||||||||||||||||||||||||||| Sbjct: 2736641 agtaccgtgagggaaaggtgaaaagaacccc 2736611 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 278 ttgtgctgctaggcgaagcggttgagtgc 306 ||||||| ||||| ||||||||||||||| Sbjct: 8517723 ttgtgcttctaggtgaagcggttgagtgc 8517751
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1168 bits (589), Expect = 0.0 Identities = 600/604 (99%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598343 cctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 31598402 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 31598403 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 31598462 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598463 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 31598522 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598523 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 31598582 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598583 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 31598642 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 31598643 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 31598702 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598703 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 31598762 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598763 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 31598822 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598823 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 31598882 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598883 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 31598942 Query: 613 cgga 616 |||| Sbjct: 31598943 cgga 31598946
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1168 bits (589), Expect = 0.0 Identities = 600/604 (99%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525659 cctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 33525718 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 33525719 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 33525778 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525779 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 33525838 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525839 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 33525898 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525899 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 33525958 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 33525959 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 33526018 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526019 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 33526078 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526079 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 33526138 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526139 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 33526198 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526199 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 33526258 Query: 613 cgga 616 |||| Sbjct: 33526259 cgga 33526262 Score = 301 bits (152), Expect = 1e-78 Identities = 158/160 (98%) Strand = Plus / Minus Query: 457 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 516 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 16678101 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 16678042 Query: 517 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 576 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16678041 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 16677982 Query: 577 gccggcgactcataggcagtggcttggttaagggaacgga 616 |||||||||||||||||||||||||||||||||||||||| Sbjct: 16677981 gccggcgactcataggcagtggcttggttaagggaacgga 16677942 Score = 194 bits (98), Expect = 2e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 471 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 530 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 32744772 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 32744713 Query: 531 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 580 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32744712 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 32744663 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 437 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 483 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33538588 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33538634 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 437 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 483 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33499956 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33500002 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 464 ggaaaggtgaaaagaacccccagtgggtagtgaaataga 502 |||||||||||||||||||| ||| |||||||||||||| Sbjct: 37705382 ggaaaggtgaaaagaacccctagtaggtagtgaaataga 37705420 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 28 acgaggaagggcgtagcaagcgacgaaatgcttc 61 |||||| ||||| ||||||||||||||||||||| Sbjct: 19455163 acgaggtagggcatagcaagcgacgaaatgcttc 19455196
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1168 bits (589), Expect = 0.0 Identities = 600/604 (99%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47882 cctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 47823 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 47822 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 47763 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47762 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 47703 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47702 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 47643 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47642 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 47583 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 47582 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 47523 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47522 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 47463 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47462 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 47403 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47402 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 47343 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47342 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 47283 Query: 613 cgga 616 |||| Sbjct: 47282 cgga 47279
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1168 bits (589), Expect = 0.0 Identities = 600/604 (99%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70856 cctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 70915 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 70916 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 70975 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70976 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 71035 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71036 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 71095 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71096 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 71155 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 71156 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 71215 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71216 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 71275 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71276 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 71335 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71336 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 71395 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71396 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 71455 Query: 613 cgga 616 |||| Sbjct: 71456 cgga 71459 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 437 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 483 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 83785 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 83831 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 437 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 483 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 45153 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 45199
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1168 bits (589), Expect = 0.0 Identities = 597/600 (99%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123706 cctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 123647 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 123646 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 123587 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123586 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 123527 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123526 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 123467 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123466 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 123407 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 123406 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 123347 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123346 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 123287 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123286 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 123227 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123226 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 123167 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123166 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 123107 Score = 1168 bits (589), Expect = 0.0 Identities = 597/600 (99%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99131 cctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 99190 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 99191 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 99250 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99251 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 99310 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99311 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 99370 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99371 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 99430 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 99431 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 99490 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99491 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 99550 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99551 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 99610 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99611 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 99670 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99671 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 99730
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 1168 bits (589), Expect = 0.0 Identities = 600/604 (99%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28 cctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 87 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 88 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 147 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 207 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 267 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 268 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 327 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 328 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 387 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 447 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 448 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 507 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 508 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 567 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 568 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 627 Query: 613 cgga 616 |||| Sbjct: 628 cgga 631
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1168 bits (589), Expect = 0.0 Identities = 600/604 (99%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949437 cctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 19949496 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 19949497 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 19949556 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949557 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 19949616 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949617 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 19949676 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949677 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 19949736 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 19949737 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 19949796 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949797 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 19949856 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949857 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 19949916 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949917 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 19949976 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949977 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 19950036 Query: 613 cgga 616 |||| Sbjct: 19950037 cgga 19950040 Score = 1168 bits (589), Expect = 0.0 Identities = 600/604 (99%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283309 cctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 10283250 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 10283249 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 10283190 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283189 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 10283130 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283129 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 10283070 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283069 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 10283010 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 10283009 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 10282950 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282949 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 10282890 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282889 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 10282830 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282829 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 10282770 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282769 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 10282710 Query: 613 cgga 616 |||| Sbjct: 10282709 cgga 10282706 Score = 1160 bits (585), Expect = 0.0 Identities = 599/604 (99%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393067 cctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 10393126 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 10393127 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 10393186 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393187 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 10393246 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393247 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 10393306 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393307 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 10393366 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 10393367 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 10393426 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393427 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 10393486 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 10393487 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaacccccagtgggta 10393546 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393547 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 10393606 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393607 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 10393666 Query: 613 cgga 616 |||| Sbjct: 10393667 cgga 10393670 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 437 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 483 ||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 2736608 tgaccgatagcatacaagtaccgtgagggaaaggtgaaaagaacccc 2736562 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 278 ttgtgctgctaggcgaagcggttgagtgc 306 ||||||| ||||| ||||||||||||||| Sbjct: 8522822 ttgtgcttctaggtgaagcggttgagtgc 8522850
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1168 bits (589), Expect = 0.0 Identities = 597/600 (99%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124423 cctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 124364 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 124363 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 124304 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124303 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 124244 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124243 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 124184 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124183 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 124124 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 124123 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 124064 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124063 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 124004 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124003 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 123944 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123943 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 123884 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123883 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 123824 Score = 1168 bits (589), Expect = 0.0 Identities = 597/600 (99%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99808 cctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 99867 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 99868 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 99927 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99928 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 99987 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99988 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 100047 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100048 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 100107 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 100108 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 100167 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100168 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 100227 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100228 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 100287 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100288 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 100347 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100348 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 100407
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1168 bits (589), Expect = 0.0 Identities = 600/604 (99%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119850 cctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 119791 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 119790 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 119731 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119730 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 119671 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119670 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 119611 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119610 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 119551 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 119550 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 119491 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119490 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 119431 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119430 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 119371 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119370 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 119311 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119310 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 119251 Query: 613 cgga 616 |||| Sbjct: 119250 cgga 119247 Score = 1168 bits (589), Expect = 0.0 Identities = 600/604 (99%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95189 cctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 95248 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 95249 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 95308 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95309 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 95368 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95369 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 95428 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95429 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 95488 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 95489 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 95548 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95549 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 95608 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95609 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 95668 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95669 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 95728 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95729 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 95788 Query: 613 cgga 616 |||| Sbjct: 95789 cgga 95792
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 1164 bits (587), Expect = 0.0 Identities = 598/602 (99%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 25 cctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 84 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 85 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 144 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 204 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 205 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 264 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 265 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 324 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 325 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 384 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 385 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 444 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 445 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 504 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 505 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 564 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 565 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 624 Query: 613 cg 614 || Sbjct: 625 cg 626
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1160 bits (585), Expect = 0.0 Identities = 599/604 (99%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140824 cctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 140883 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 140884 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 140943 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140944 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 141003 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141004 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 141063 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141064 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 141123 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 141124 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 141183 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 141184 atggggcacgtggaatcctgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 141243 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141244 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 141303 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141304 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 141363 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141364 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 141423 Query: 613 cgga 616 |||| Sbjct: 141424 cgga 141427
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1160 bits (585), Expect = 0.0 Identities = 599/604 (99%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93420 cctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 93479 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 93480 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 93539 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93540 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 93599 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93600 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 93659 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93660 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 93719 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 93720 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 93779 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93780 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 93839 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 93840 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaacccccagtgggta 93899 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93900 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 93959 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93960 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 94019 Query: 613 cgga 616 |||| Sbjct: 94020 cgga 94023
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1160 bits (585), Expect = 0.0 Identities = 599/604 (99%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27484 cctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 27543 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 27544 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 27603 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27604 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 27663 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27664 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 27723 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27724 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 27783 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 27784 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 27843 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27844 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 27903 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 27904 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaacccccagtgggta 27963 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27964 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 28023 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28024 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 28083 Query: 613 cgga 616 |||| Sbjct: 28084 cgga 28087
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1152 bits (581), Expect = 0.0 Identities = 598/604 (99%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9242105 cctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 9242046 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 9242045 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 9241986 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241985 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 9241926 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 9241925 gcaaaagcgattcccgtagtagcagcgagcgaaatgggagcagcctaaaccgtgaaaacg 9241866 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241865 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 9241806 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 9241805 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 9241746 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241745 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 9241686 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241685 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 9241626 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241625 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 9241566 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 9241565 gaccgcgtgcctgttgaagaatgagctggcgactcataggcagtggcttggttaagggaa 9241506 Query: 613 cgga 616 |||| Sbjct: 9241505 cgga 9241502 Score = 67.9 bits (34), Expect = 4e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 160 actgaaacatcttagtagccagaggaaaagaaag 193 |||||||||||||||||||||||||||||||||| Sbjct: 10177929 actgaaacatcttagtagccagaggaaaagaaag 10177896
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1152 bits (581), Expect = 0.0 Identities = 598/604 (99%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53318 cctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 53259 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 53258 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 53199 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53198 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 53139 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 53138 gcaaaagcgattcccgtagtagcagcgagcgaaatgggagcagcctaaaccgtgaaaacg 53079 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53078 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 53019 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 53018 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 52959 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52958 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 52899 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52898 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 52839 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52838 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 52779 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 52778 gaccgcgtgcctgttgaagaatgagctggcgactcataggcagtggcttggttaagggaa 52719 Query: 613 cgga 616 |||| Sbjct: 52718 cgga 52715
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 1128 bits (569), Expect = 0.0 Identities = 581/585 (99%) Strand = Plus / Plus Query: 29 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 Query: 89 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 148 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 61 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 120 Query: 149 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 Query: 209 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 268 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 Query: 269 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 328 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gtacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 Query: 329 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 388 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 301 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 360 Query: 389 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 Query: 449 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 Query: 509 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 568 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 481 aaccgtgctgagctcccaagcagtgggaggggaaattgatctctgaccgcgtgcctgttg 540 Query: 569 aagaatgagccggcgactcataggcagtggcttggttaagggaac 613 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 541 aagaatgagccggcgactcataggcagtggcttggttaagggaac 585
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1106 bits (558), Expect = 0.0 Identities = 592/601 (98%), Gaps = 2/601 (0%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaag-ggcgtagcaagcgacgaaatgcttcggggagttga 71 ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 123646 cctaggcacccagagacgaggaagaggcgtagcaagcgacgaaatgcttcggggagttga 123587 Query: 72 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 131 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 123586 aaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgccgaatc 123527 Query: 132 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123526 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 123467 Query: 192 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123466 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 123407 Query: 252 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 311 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123406 ggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 123347 Query: 312 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 371 |||||||||||| |||||||||||||| ||||||||| ||||| |||||||||||||||| Sbjct: 123346 cctagatggctatagtccagtagccgatagcatcact-gcttacgctctgacccgagtag 123288 Query: 372 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123287 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 123228 Query: 432 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123227 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 123168 Query: 492 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123167 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 123108 Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123107 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 123048 Query: 612 a 612 | Sbjct: 123047 a 123047 Score = 1106 bits (558), Expect = 0.0 Identities = 592/601 (98%), Gaps = 2/601 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaag-ggcgtagcaagcgacgaaatgcttcggggagttga 71 ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 99091 cctaggcacccagagacgaggaagaggcgtagcaagcgacgaaatgcttcggggagttga 99150 Query: 72 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 131 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 99151 aaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgccgaatc 99210 Query: 132 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99211 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 99270 Query: 192 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99271 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 99330 Query: 252 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 311 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99331 ggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 99390 Query: 312 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 371 |||||||||||| |||||||||||||| ||||||||| ||||| |||||||||||||||| Sbjct: 99391 cctagatggctatagtccagtagccgatagcatcact-gcttacgctctgacccgagtag 99449 Query: 372 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99450 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 99509 Query: 432 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99510 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 99569 Query: 492 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99570 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 99629 Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99630 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 99689 Query: 612 a 612 | Sbjct: 99690 a 99690
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1106 bits (558), Expect = 0.0 Identities = 592/601 (98%), Gaps = 2/601 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaag-ggcgtagcaagcgacgaaatgcttcggggagttga 71 ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 5444 cctaggcacccagagacgaggaagaggcgtagcaagcgacgaaatgcttcggggagttga 5503 Query: 72 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 131 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 5504 aaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgccgaatc 5563 Query: 132 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5564 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 5623 Query: 192 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5624 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 5683 Query: 252 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 311 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5684 ggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 5743 Query: 312 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 371 |||||||||||| |||||||||||||| ||||||||| ||||| |||||||||||||||| Sbjct: 5744 cctagatggctatagtccagtagccgatagcatcact-gcttacgctctgacccgagtag 5802 Query: 372 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5803 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 5862 Query: 432 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5863 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 5922 Query: 492 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5923 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 5982 Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5983 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 6042 Query: 612 a 612 | Sbjct: 6043 a 6043
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1106 bits (558), Expect = 0.0 Identities = 592/601 (98%), Gaps = 2/601 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaag-ggcgtagcaagcgacgaaatgcttcggggagttga 71 ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 32 cctaggcacccagagacgaggaagaggcgtagcaagcgacgaaatgcttcggggagttga 91 Query: 72 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 131 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 92 aaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgccgaatc 151 Query: 132 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 152 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 211 Query: 192 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 212 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 271 Query: 252 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 311 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 272 ggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 331 Query: 312 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 371 |||||||||||| |||||||||||||| ||||||||| ||||| |||||||||||||||| Sbjct: 332 cctagatggctatagtccagtagccgatagcatcact-gcttacgctctgacccgagtag 390 Query: 372 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 391 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 450 Query: 432 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 451 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 510 Query: 492 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 511 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 570 Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 571 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 630 Query: 612 a 612 | Sbjct: 631 a 631
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 1051 bits (530), Expect = 0.0 Identities = 536/538 (99%) Strand = Plus / Plus Query: 79 catagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagc 138 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1 catagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagc 60 Query: 139 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 120 Query: 199 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 180 Query: 259 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 240 Query: 319 ggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgggg 378 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 241 ggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgggg 300 Query: 379 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 360 Query: 439 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 420 Query: 499 tagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgc 558 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 tagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgc 480 Query: 559 gtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 616 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 gtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 538
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 1035 bits (522), Expect = 0.0 Identities = 531/534 (99%) Strand = Plus / Plus Query: 83 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 142 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 60 Query: 143 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 120 Query: 203 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 180 Query: 263 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 240 Query: 323 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 382 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 241 aaagtccagtagccgaaagcatcgctagcttacgctctgacccgagtagcatggggcacg 300 Query: 383 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 360 Query: 443 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 420 Query: 503 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 562 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 480 Query: 563 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 616 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 534
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 991 bits (500), Expect = 0.0 Identities = 577/601 (96%), Gaps = 4/601 (0%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139556 cctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 139497 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||| Sbjct: 139496 aataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatcc 139438 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139437 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 139378 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139377 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 139318 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||| |||||||||||||||||||| |||| | ||||| Sbjct: 139317 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtactgcacc 139258 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 ||||||||| | |||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 139257 ctagatggcgagagtccagtagccgaaagcatcactggcttacgctctgacccgagtagc 139198 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139197 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 139138 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 139137 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggga 139078 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||| |||||||| |||||||||||||||||||||| ||| |||||||| Sbjct: 139077 gtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaatttgatctct 139021 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139020 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 138961 Query: 613 c 613 | Sbjct: 138960 c 138960 Score = 991 bits (500), Expect = 0.0 Identities = 577/601 (96%), Gaps = 4/601 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110389 cctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 110448 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||| Sbjct: 110449 aataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatcc 110507 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110508 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 110567 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110568 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 110627 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||| |||||||||||||||||||| |||| | ||||| Sbjct: 110628 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtactgcacc 110687 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 ||||||||| | |||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 110688 ctagatggcgagagtccagtagccgaaagcatcactggcttacgctctgacccgagtagc 110747 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110748 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 110807 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 110808 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggga 110867 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||| |||||||| |||||||||||||||||||||| ||| |||||||| Sbjct: 110868 gtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaatttgatctct 110924 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110925 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 110984 Query: 613 c 613 | Sbjct: 110985 c 110985
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 991 bits (500), Expect = 0.0 Identities = 577/601 (96%), Gaps = 4/601 (0%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134193 cctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 134134 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||| Sbjct: 134133 aataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatcc 134075 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134074 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 134015 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134014 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 133955 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||| ||||||||||||||||| || || ||| ||||| Sbjct: 133954 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggaatgctgcacc 133895 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 ||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 133894 ctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 133835 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133834 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 133775 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 133774 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggga 133715 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||| |||||||| | |||||||||||||||||||| ||| ||||||||| Sbjct: 133714 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatgtgatctct 133658 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133657 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 133598 Query: 613 c 613 | Sbjct: 133597 c 133597 Score = 991 bits (500), Expect = 0.0 Identities = 577/601 (96%), Gaps = 4/601 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103778 cctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 103837 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||| Sbjct: 103838 aataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatcc 103896 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103897 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 103956 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103957 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 104016 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||| ||||||||||||||||| || || ||| ||||| Sbjct: 104017 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggaatgctgcacc 104076 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 ||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 104077 ctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 104136 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104137 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 104196 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 104197 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggga 104256 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||| |||||||| | |||||||||||||||||||| ||| ||||||||| Sbjct: 104257 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatgtgatctct 104313 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104314 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 104373 Query: 613 c 613 | Sbjct: 104374 c 104374
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 989 bits (499), Expect = 0.0 Identities = 576/600 (96%), Gaps = 4/600 (0%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127834 cctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 127775 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||| Sbjct: 127774 aataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatcc 127716 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127715 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 127656 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127655 gcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 127596 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||| Sbjct: 127595 gggttgtgggagagcaatacaagcgtcatgctgctaggcgaagcggtggagtgctgcacc 127536 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 ||||||||| | |||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct: 127535 ctagatggcgagagtccagtagccgaaaacatcactagcttacgctctgacccgagtagc 127476 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127475 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 127416 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 127415 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggga 127356 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||| |||||||| |||||||||||||||||||||| ||| ||||||||| Sbjct: 127355 gtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaatgtgatctct 127299 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127298 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 127239 Score = 989 bits (499), Expect = 0.0 Identities = 576/600 (96%), Gaps = 4/600 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107088 cctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 107147 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||| Sbjct: 107148 aataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatcc 107206 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107207 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 107266 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107267 gcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 107326 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||| Sbjct: 107327 gggttgtgggagagcaatacaagcgtcatgctgctaggcgaagcggtggagtgctgcacc 107386 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 ||||||||| | |||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct: 107387 ctagatggcgagagtccagtagccgaaaacatcactagcttacgctctgacccgagtagc 107446 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107447 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 107506 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 107507 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggga 107566 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||| |||||||| |||||||||||||||||||||| ||| ||||||||| Sbjct: 107567 gtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaatgtgatctct 107623 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107624 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 107683
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 975 bits (492), Expect = 0.0 Identities = 575/601 (95%), Gaps = 4/601 (0%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142078 cctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 142019 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| ||| ||||||||||| |||||| |||||||||| Sbjct: 142018 aataagcatagatccggagattcccgaatgggtcaacctttcgaactgc-tgctgaatcc 141960 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141959 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 141900 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141899 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 141840 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||| Sbjct: 141839 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggttgagtactgcacc 141780 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 ||||||||| | ||||||||| |||||||||||||| ||||| ||||||||||||||||| Sbjct: 141779 ctagatggcgagagtccagtaaccgaaagcatcactggcttacgctctgacccgagtagc 141720 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 141719 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcc 141660 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 141659 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggga 141600 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||| |||||||| |||||||||||||||||||||| ||| |||||||| Sbjct: 141599 gtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaatttgatctct 141543 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141542 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 141483 Query: 613 c 613 | Sbjct: 141482 c 141482 Score = 975 bits (492), Expect = 0.0 Identities = 575/601 (95%), Gaps = 4/601 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111579 cctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 111638 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| ||| ||||||||||| |||||| |||||||||| Sbjct: 111639 aataagcatagatccggagattcccgaatgggtcaacctttcgaactgc-tgctgaatcc 111697 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111698 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 111757 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111758 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 111817 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||| Sbjct: 111818 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggttgagtactgcacc 111877 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 ||||||||| | ||||||||| |||||||||||||| ||||| ||||||||||||||||| Sbjct: 111878 ctagatggcgagagtccagtaaccgaaagcatcactggcttacgctctgacccgagtagc 111937 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 111938 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcc 111997 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 111998 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggga 112057 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||| |||||||| |||||||||||||||||||||| ||| |||||||| Sbjct: 112058 gtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaatttgatctct 112114 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112115 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 112174 Query: 613 c 613 | Sbjct: 112175 c 112175
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 965 bits (487), Expect = 0.0 Identities = 574/601 (95%), Gaps = 8/601 (1%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 134951 cctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 134892 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||| Sbjct: 134891 aataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatcc 134833 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134832 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 134773 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134772 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 134713 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||| ||||||||||||||||| || |||||| ||||| Sbjct: 134712 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgctgcacc 134653 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 ||||||||||| |||||||||||||||||||||||||||||| | ||| ||||||||||| Sbjct: 134652 ctagatggctagagtccagtagccgaaagcatcactagcttacgttctaacccgagtagc 134593 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134592 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 134533 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 134532 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggga 134473 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||| |||||||| |||||||||||||||||||||| ||| |||||| Sbjct: 134472 gtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaa----atctct 134420 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134419 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 134360 Query: 613 c 613 | Sbjct: 134359 c 134359 Score = 965 bits (487), Expect = 0.0 Identities = 574/601 (95%), Gaps = 8/601 (1%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 105331 cctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 105390 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||| Sbjct: 105391 aataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatcc 105449 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105450 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 105509 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105510 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 105569 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||| ||||||||||||||||| || |||||| ||||| Sbjct: 105570 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgctgcacc 105629 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 ||||||||||| |||||||||||||||||||||||||||||| | ||| ||||||||||| Sbjct: 105630 ctagatggctagagtccagtagccgaaagcatcactagcttacgttctaacccgagtagc 105689 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105690 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 105749 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 105750 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggga 105809 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||| |||||||| |||||||||||||||||||||| ||| |||||| Sbjct: 105810 gtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaa----atctct 105862 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105863 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 105922 Query: 613 c 613 | Sbjct: 105923 c 105923
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 963 bits (486), Expect = 0.0 Identities = 489/490 (99%) Strand = Plus / Plus Query: 116 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 175 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 60 Query: 176 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 120 Query: 236 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 295 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 180 Query: 296 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 355 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttac 240 Query: 356 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 300 Query: 416 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 360 Query: 476 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 535 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 420 Query: 536 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 595 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 480 Query: 596 tggcttggtt 605 |||||||||| Sbjct: 481 tggcttggtt 490
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 961 bits (485), Expect = 0.0 Identities = 574/601 (95%), Gaps = 6/601 (0%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 136561 cctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 136502 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||| Sbjct: 136501 aataagcatagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatcc 136443 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136442 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 136383 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136382 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 136323 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||| Sbjct: 136322 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcacc 136263 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 ||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 136262 ctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 136203 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136202 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 136143 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 136142 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 136083 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||| |||||||| | |||||||||||||||||||| | || | |||| Sbjct: 136082 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctct 136028 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136027 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 135968 Query: 613 c 613 | Sbjct: 135967 c 135967 Score = 961 bits (485), Expect = 0.0 Identities = 574/601 (95%), Gaps = 6/601 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 105864 cctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 105923 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||| Sbjct: 105924 aataagcatagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatcc 105982 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105983 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 106042 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106043 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 106102 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||| Sbjct: 106103 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcacc 106162 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 ||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 106163 ctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 106222 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106223 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 106282 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 106283 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 106342 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||| |||||||| | |||||||||||||||||||| | || | |||| Sbjct: 106343 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctct 106397 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106398 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 106457 Query: 613 c 613 | Sbjct: 106458 c 106458
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 944 bits (476), Expect = 0.0 Identities = 572/601 (95%), Gaps = 5/601 (0%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 132745 cctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 132686 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| ||||||| ||||||| ||||||| |||||||||| Sbjct: 132685 aataagcatagatccggagattcccgaataggttaacctttcaaactgc-tgctgaatcc 132627 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132626 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 132567 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132566 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 132507 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||| ||||||||||||||||| || || ||| ||||| Sbjct: 132506 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcacc 132447 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132446 ctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 132387 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132386 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 132327 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 132326 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 132267 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||| |||||||| | |||||||||||||||||||| | | | |||| Sbjct: 132266 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggctct 132211 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132210 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 132151 Query: 613 c 613 | Sbjct: 132150 c 132150 Score = 944 bits (476), Expect = 0.0 Identities = 572/601 (95%), Gaps = 5/601 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 104133 cctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 104192 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| ||||||| ||||||| ||||||| |||||||||| Sbjct: 104193 aataagcatagatccggagattcccgaataggttaacctttcaaactgc-tgctgaatcc 104251 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104252 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 104311 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104312 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 104371 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||| ||||||||||||||||| || || ||| ||||| Sbjct: 104372 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcacc 104431 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104432 ctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 104491 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104492 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 104551 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 104552 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 104611 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||| |||||||| | |||||||||||||||||||| | | | |||| Sbjct: 104612 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggctct 104667 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104668 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 104727 Query: 613 c 613 | Sbjct: 104728 c 104728
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 944 bits (476), Expect = 0.0 Identities = 572/601 (95%), Gaps = 5/601 (0%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 132968 cctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 132909 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||| ||||||||||||||||| ||||||| |||||||| |||||| |||||||||| Sbjct: 132908 aataagcgtagatccggagattcccgaataggttaaccttttgaactgc-tgctgaatcc 132850 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132849 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 132790 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132789 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 132730 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 ||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||| Sbjct: 132729 gggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtggagtgccgcacc 132670 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132669 ctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 132610 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132609 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 132550 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 132549 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 132490 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||| |||||||| | |||||||||||||||||||| | || |||| Sbjct: 132489 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-ccctgggctct 132434 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132433 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 132374 Query: 613 c 613 | Sbjct: 132373 c 132373 Score = 944 bits (476), Expect = 0.0 Identities = 572/601 (95%), Gaps = 5/601 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 103796 cctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 103855 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||| ||||||||||||||||| ||||||| |||||||| |||||| |||||||||| Sbjct: 103856 aataagcgtagatccggagattcccgaataggttaaccttttgaactgc-tgctgaatcc 103914 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103915 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 103974 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103975 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 104034 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 ||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||| Sbjct: 104035 gggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtggagtgccgcacc 104094 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104095 ctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 104154 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104155 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 104214 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 104215 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 104274 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||| |||||||| | |||||||||||||||||||| | || |||| Sbjct: 104275 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-ccctgggctct 104330 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104331 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 104390 Query: 613 c 613 | Sbjct: 104391 c 104391
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 944 bits (476), Expect = 0.0 Identities = 572/601 (95%), Gaps = 5/601 (0%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 132738 cctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 132679 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| ||||||| ||||||| ||||||| |||||||||| Sbjct: 132678 aataagcatagatccggagattcccgaataggttaacctttcaaactgc-tgctgaatcc 132620 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132619 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 132560 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132559 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 132500 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||| ||||||||||||||||| || || ||| ||||| Sbjct: 132499 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcacc 132440 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132439 ctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 132380 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132379 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 132320 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 132319 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 132260 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||| |||||||| | |||||||||||||||||||| | | | |||| Sbjct: 132259 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggctct 132204 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132203 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 132144 Query: 613 c 613 | Sbjct: 132143 c 132143 Score = 944 bits (476), Expect = 0.0 Identities = 572/601 (95%), Gaps = 5/601 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 104131 cctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 104190 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| ||||||| ||||||| ||||||| |||||||||| Sbjct: 104191 aataagcatagatccggagattcccgaataggttaacctttcaaactgc-tgctgaatcc 104249 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104250 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 104309 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104310 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 104369 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||| ||||||||||||||||| || || ||| ||||| Sbjct: 104370 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcacc 104429 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104430 ctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 104489 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104490 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 104549 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 104550 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 104609 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||| |||||||| | |||||||||||||||||||| | | | |||| Sbjct: 104610 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggctct 104665 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104666 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 104725 Query: 613 c 613 | Sbjct: 104726 c 104726
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 938 bits (473), Expect = 0.0 Identities = 484/488 (99%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29 cctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 88 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 89 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 148 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 208 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 209 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 268 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 328 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 329 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 388 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 448 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 449 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 508 Query: 493 gtgaaata 500 |||||||| Sbjct: 509 gtgaaata 516
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 936 bits (472), Expect = 0.0 Identities = 571/601 (95%), Gaps = 5/601 (0%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 131637 cctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 131578 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| ||||||| ||||||| ||||||| |||||||||| Sbjct: 131577 aataagcatagatccggagattcccgaataggttaacctttcaaactgc-tgctgaatcc 131519 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131518 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 131459 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131458 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 131399 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||| ||||||||||||||||| || || ||| ||||| Sbjct: 131398 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcacc 131339 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 131338 ctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 131279 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131278 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 131219 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 131218 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 131159 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||| |||||||| | |||||||||||||||||||| | | | |||| Sbjct: 131158 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggctct 131103 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131102 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 131043 Query: 613 c 613 | Sbjct: 131042 c 131042 Score = 936 bits (472), Expect = 0.0 Identities = 571/601 (95%), Gaps = 5/601 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 102998 cctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 103057 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| ||||||| ||||||| ||||||| |||||||||| Sbjct: 103058 aataagcatagatccggagattcccgaataggttaacctttcaaactgc-tgctgaatcc 103116 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103117 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 103176 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103177 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 103236 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||| ||||||||||||||||| || || ||| ||||| Sbjct: 103237 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcacc 103296 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 103297 ctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 103356 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103357 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 103416 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 103417 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 103476 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||| |||||||| | |||||||||||||||||||| | | | |||| Sbjct: 103477 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggctct 103532 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103533 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 103592 Query: 613 c 613 | Sbjct: 103593 c 103593
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 936 bits (472), Expect = 0.0 Identities = 571/601 (95%), Gaps = 5/601 (0%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 133929 cctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 133870 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||| ||||||||||||||||| ||||||| |||||||| |||||| |||||||||| Sbjct: 133869 aataagcgtagatccggagattcccgaataggttaaccttttgaactgc-tgctgaatcc 133811 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133810 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 133751 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133750 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 133691 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 ||||||||||||||||| | |||||| |||||||||||||||||||| |||||||||||| Sbjct: 133690 gggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtggagtgccgcacc 133631 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133630 ctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 133571 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133570 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 133511 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 133510 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 133451 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||| |||||||| | |||||||||||||||||||| | || |||| Sbjct: 133450 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-ccctgggctct 133395 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133394 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 133335 Query: 613 c 613 | Sbjct: 133334 c 133334 Score = 936 bits (472), Expect = 0.0 Identities = 571/601 (95%), Gaps = 5/601 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 104720 cctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 104779 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||| ||||||||||||||||| ||||||| |||||||| |||||| |||||||||| Sbjct: 104780 aataagcgtagatccggagattcccgaataggttaaccttttgaactgc-tgctgaatcc 104838 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104839 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 104898 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104899 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 104958 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 ||||||||||||||||| | |||||| |||||||||||||||||||| |||||||||||| Sbjct: 104959 gggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtggagtgccgcacc 105018 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105019 ctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 105078 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105079 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 105138 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 105139 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 105198 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||| |||||||| | |||||||||||||||||||| | || |||| Sbjct: 105199 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-ccctgggctct 105254 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105255 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 105314 Query: 613 c 613 | Sbjct: 105315 c 105315
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 928 bits (468), Expect = 0.0 Identities = 570/601 (94%), Gaps = 5/601 (0%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 140330 cctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 140271 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||| Sbjct: 140270 aataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatcc 140212 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140211 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 140152 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140151 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 140092 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||| ||||||||||||||||||| || ||| ||||| Sbjct: 140091 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggcggaatgctgcacc 140032 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 ||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 140031 ctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 139972 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139971 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 139912 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 139911 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 139852 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||| |||||||| | || ||||||||||||||||| | | | | |||| Sbjct: 139851 gtgaaatagaacatgaaaccg---taagttcccaagcagtgggaggag-acgggggctct 139796 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139795 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 139736 Query: 613 c 613 | Sbjct: 139735 c 139735 Score = 928 bits (468), Expect = 0.0 Identities = 570/601 (94%), Gaps = 5/601 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 109730 cctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 109789 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||| Sbjct: 109790 aataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatcc 109848 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109849 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 109908 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109909 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 109968 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||| ||||||||||||||||||| || ||| ||||| Sbjct: 109969 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggcggaatgctgcacc 110028 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 ||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 110029 ctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 110088 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110089 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 110148 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 110149 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 110208 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||| |||||||| | || ||||||||||||||||| | | | | |||| Sbjct: 110209 gtgaaatagaacatgaaaccg---taagttcccaagcagtgggaggag-acgggggctct 110264 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110265 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 110324 Query: 613 c 613 | Sbjct: 110325 c 110325
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 928 bits (468), Expect = 0.0 Identities = 570/601 (94%), Gaps = 5/601 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 29 cctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 88 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||| ||||||||||||||||| ||||||| |||||||| |||||| |||||||||| Sbjct: 89 aataagcgtagatccggagattcccgaataggttaaccttttgaactgc-tgctgaatcc 147 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 207 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 267 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 ||||||||||||||||| | |||||| |||||||||||||||||||| |||||||||||| Sbjct: 268 gggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtggagtgccgcacc 327 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 ||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 328 ctagatggcgagagtccagtagccgagagcatcactagcttatgctctgacccgagtagc 387 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 447 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 448 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 507 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||| |||||||| | |||||||||||||||||||| | || |||| Sbjct: 508 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-ccctgggctct 563 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 564 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 623 Query: 613 c 613 | Sbjct: 624 c 624
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 928 bits (468), Expect = 0.0 Identities = 570/601 (94%), Gaps = 5/601 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 38 cctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 97 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||| ||||||||||||||||| ||||||||||||||| ||||||| |||||||||| Sbjct: 98 aataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatcc 156 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 157 atgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaa 216 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 217 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 276 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||| ||||||||||||||||| || |||||| ||||| Sbjct: 277 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgctgcacc 336 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 ||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 337 ctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 396 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 397 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 456 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 457 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 516 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||| |||||||| | |||||||||||||||||||| | | | |||| Sbjct: 517 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggctct 572 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 573 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 632 Query: 613 c 613 | Sbjct: 633 c 633
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 916 bits (462), Expect = 0.0 Identities = 570/602 (94%), Gaps = 7/602 (1%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 136270 cctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaa 136211 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| |||||| |||||||| |||||| |||||||||| Sbjct: 136210 aataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatcc 136152 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136151 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 136092 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136091 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 136032 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcac 311 |||||||||||||||||||||||||| ||||||||||||||||| | || ||| |||| Sbjct: 136031 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcac 135972 Query: 312 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 371 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135971 cctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 135912 Query: 372 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135911 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 135852 Query: 432 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 491 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 135851 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 135792 Query: 492 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 551 ||||||||||||| |||||||| | |||||||||||||||||||| | || | ||| Sbjct: 135791 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctc 135737 Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135736 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 135677 Query: 612 ac 613 || Sbjct: 135676 ac 135675 Score = 916 bits (462), Expect = 0.0 Identities = 570/602 (94%), Gaps = 7/602 (1%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 106360 cctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaa 106419 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| |||||| |||||||| |||||| |||||||||| Sbjct: 106420 aataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatcc 106478 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106479 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 106538 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106539 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 106598 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcac 311 |||||||||||||||||||||||||| ||||||||||||||||| | || ||| |||| Sbjct: 106599 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcac 106658 Query: 312 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 371 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106659 cctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 106718 Query: 372 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106719 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 106778 Query: 432 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 491 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 106779 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 106838 Query: 492 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 551 ||||||||||||| |||||||| | |||||||||||||||||||| | || | ||| Sbjct: 106839 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctc 106893 Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106894 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 106953 Query: 612 ac 613 || Sbjct: 106954 ac 106955
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 916 bits (462), Expect = 0.0 Identities = 570/602 (94%), Gaps = 7/602 (1%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 136908 cctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaa 136849 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| |||||| |||||||| |||||| |||||||||| Sbjct: 136848 aataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatcc 136790 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136789 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 136730 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136729 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 136670 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcac 311 |||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| |||| Sbjct: 136669 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcac 136610 Query: 312 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 371 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 136609 cctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 136550 Query: 372 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136549 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 136490 Query: 432 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 491 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 136489 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 136430 Query: 492 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 551 ||||||||||||| |||||||| | |||||||||||||||||||| | || | ||| Sbjct: 136429 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctc 136375 Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136374 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 136315 Query: 612 ac 613 || Sbjct: 136314 ac 136313 Score = 916 bits (462), Expect = 0.0 Identities = 570/602 (94%), Gaps = 7/602 (1%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 106649 cctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaa 106708 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| |||||| |||||||| |||||| |||||||||| Sbjct: 106709 aataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatcc 106767 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106768 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 106827 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106828 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 106887 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcac 311 |||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| |||| Sbjct: 106888 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcac 106947 Query: 312 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 371 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 106948 cctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 107007 Query: 372 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107008 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 107067 Query: 432 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 491 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 107068 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 107127 Query: 492 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 551 ||||||||||||| |||||||| | |||||||||||||||||||| | || | ||| Sbjct: 107128 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctc 107182 Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107183 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 107242 Query: 612 ac 613 || Sbjct: 107243 ac 107244
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 916 bits (462), Expect = 0.0 Identities = 570/602 (94%), Gaps = 7/602 (1%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 1554 cctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaa 1613 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| |||||| |||||||| |||||| |||||||||| Sbjct: 1614 aataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatcc 1672 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1673 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 1732 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1733 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 1792 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcac 311 |||||||||||||||||||||||||| ||||||||||||||||| | || ||| |||| Sbjct: 1793 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcac 1852 Query: 312 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 371 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1853 cctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 1912 Query: 372 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1913 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 1972 Query: 432 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 491 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 1973 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 2032 Query: 492 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 551 ||||||||||||| |||||||| | |||||||||||||||||||| | || | ||| Sbjct: 2033 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctc 2087 Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2088 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 2147 Query: 612 ac 613 || Sbjct: 2148 ac 2149
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 916 bits (462), Expect = 0.0 Identities = 570/602 (94%), Gaps = 7/602 (1%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 135516 cctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaa 135457 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| |||||| |||||||| |||||| |||||||||| Sbjct: 135456 aataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatcc 135398 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135397 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 135338 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135337 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 135278 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcac 311 |||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| |||| Sbjct: 135277 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcac 135218 Query: 312 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 371 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 135217 cctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 135158 Query: 372 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135157 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 135098 Query: 432 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 491 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 135097 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 135038 Query: 492 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 551 ||||||||||||| |||||||| | |||||||||||||||||||| | || | ||| Sbjct: 135037 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctc 134983 Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134982 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 134923 Query: 612 ac 613 || Sbjct: 134922 ac 134921 Score = 916 bits (462), Expect = 0.0 Identities = 570/602 (94%), Gaps = 7/602 (1%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 105520 cctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaa 105579 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| |||||| |||||||| |||||| |||||||||| Sbjct: 105580 aataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatcc 105638 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105639 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 105698 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105699 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 105758 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcac 311 |||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| |||| Sbjct: 105759 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcac 105818 Query: 312 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 371 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 105819 cctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 105878 Query: 372 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105879 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 105938 Query: 432 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 491 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 105939 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 105998 Query: 492 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 551 ||||||||||||| |||||||| | |||||||||||||||||||| | || | ||| Sbjct: 105999 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctc 106053 Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106054 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 106113 Query: 612 ac 613 || Sbjct: 106114 ac 106115
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 916 bits (462), Expect = 0.0 Identities = 570/602 (94%), Gaps = 7/602 (1%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 135651 cctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaa 135592 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| |||||| |||||||| |||||| |||||||||| Sbjct: 135591 aataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatcc 135533 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135532 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 135473 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135472 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 135413 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcac 311 |||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| |||| Sbjct: 135412 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcac 135353 Query: 312 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 371 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 135352 cctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 135293 Query: 372 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135292 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 135233 Query: 432 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 491 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 135232 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 135173 Query: 492 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 551 ||||||||||||| |||||||| | |||||||||||||||||||| | || | ||| Sbjct: 135172 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctc 135118 Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135117 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 135058 Query: 612 ac 613 || Sbjct: 135057 ac 135056 Score = 916 bits (462), Expect = 0.0 Identities = 570/602 (94%), Gaps = 7/602 (1%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 105692 cctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaa 105751 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| |||||| |||||||| |||||| |||||||||| Sbjct: 105752 aataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatcc 105810 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105811 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 105870 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105871 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 105930 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcac 311 |||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| |||| Sbjct: 105931 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcac 105990 Query: 312 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 371 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 105991 cctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 106050 Query: 372 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106051 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 106110 Query: 432 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 491 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 106111 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 106170 Query: 492 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 551 ||||||||||||| |||||||| | |||||||||||||||||||| | || | ||| Sbjct: 106171 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctc 106225 Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106226 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 106285 Query: 612 ac 613 || Sbjct: 106286 ac 106287
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 916 bits (462), Expect = 0.0 Identities = 570/602 (94%), Gaps = 7/602 (1%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 135649 cctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaa 135590 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| |||||| |||||||| |||||| |||||||||| Sbjct: 135589 aataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatcc 135531 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135530 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 135471 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135470 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 135411 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcac 311 |||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| |||| Sbjct: 135410 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcac 135351 Query: 312 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 371 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 135350 cctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 135291 Query: 372 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135290 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 135231 Query: 432 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 491 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 135230 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 135171 Query: 492 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 551 ||||||||||||| |||||||| | |||||||||||||||||||| | || | ||| Sbjct: 135170 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctc 135116 Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135115 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 135056 Query: 612 ac 613 || Sbjct: 135055 ac 135054 Score = 916 bits (462), Expect = 0.0 Identities = 570/602 (94%), Gaps = 7/602 (1%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 105689 cctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaa 105748 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| |||||| |||||||| |||||| |||||||||| Sbjct: 105749 aataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatcc 105807 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105808 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 105867 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105868 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 105927 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcac 311 |||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| |||| Sbjct: 105928 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcac 105987 Query: 312 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 371 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 105988 cctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 106047 Query: 372 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106048 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 106107 Query: 432 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 491 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 106108 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 106167 Query: 492 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 551 ||||||||||||| |||||||| | |||||||||||||||||||| | || | ||| Sbjct: 106168 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctc 106222 Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106223 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 106282 Query: 612 ac 613 || Sbjct: 106283 ac 106284
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 916 bits (462), Expect = 0.0 Identities = 570/602 (94%), Gaps = 7/602 (1%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 135561 cctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaa 135502 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| |||||| |||||||| |||||| |||||||||| Sbjct: 135501 aataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatcc 135443 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135442 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 135383 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135382 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 135323 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcac 311 |||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| |||| Sbjct: 135322 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcac 135263 Query: 312 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 371 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 135262 cctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 135203 Query: 372 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135202 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 135143 Query: 432 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 491 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 135142 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 135083 Query: 492 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 551 ||||||||||||| |||||||| | |||||||||||||||||||| | || | ||| Sbjct: 135082 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctc 135028 Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135027 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 134968 Query: 612 ac 613 || Sbjct: 134967 ac 134966 Score = 916 bits (462), Expect = 0.0 Identities = 570/602 (94%), Gaps = 7/602 (1%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 105567 cctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaa 105626 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| |||||| |||||||| |||||| |||||||||| Sbjct: 105627 aataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatcc 105685 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105686 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 105745 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105746 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 105805 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcac 311 |||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| |||| Sbjct: 105806 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcac 105865 Query: 312 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 371 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 105866 cctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 105925 Query: 372 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105926 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 105985 Query: 432 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 491 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 105986 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 106045 Query: 492 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 551 ||||||||||||| |||||||| | |||||||||||||||||||| | || | ||| Sbjct: 106046 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctc 106100 Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106101 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 106160 Query: 612 ac 613 || Sbjct: 106161 ac 106162
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 916 bits (462), Expect = 0.0 Identities = 570/602 (94%), Gaps = 7/602 (1%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 136268 cctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaa 136209 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| |||||| |||||||| |||||| |||||||||| Sbjct: 136208 aataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatcc 136150 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136149 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 136090 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136089 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 136030 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcac 311 |||||||||||||||||||||||||| ||||||||||||||||| | || ||| |||| Sbjct: 136029 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcac 135970 Query: 312 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 371 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135969 cctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 135910 Query: 372 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135909 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 135850 Query: 432 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 491 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 135849 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 135790 Query: 492 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 551 ||||||||||||| |||||||| | |||||||||||||||||||| | || | ||| Sbjct: 135789 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctc 135735 Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135734 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 135675 Query: 612 ac 613 || Sbjct: 135674 ac 135673 Score = 916 bits (462), Expect = 0.0 Identities = 570/602 (94%), Gaps = 7/602 (1%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 106358 cctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaa 106417 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| |||||| |||||||| |||||| |||||||||| Sbjct: 106418 aataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatcc 106476 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106477 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 106536 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106537 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 106596 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcac 311 |||||||||||||||||||||||||| ||||||||||||||||| | || ||| |||| Sbjct: 106597 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcac 106656 Query: 312 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 371 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106657 cctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 106716 Query: 372 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106717 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 106776 Query: 432 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 491 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 106777 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 106836 Query: 492 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 551 ||||||||||||| |||||||| | |||||||||||||||||||| | || | ||| Sbjct: 106837 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctc 106891 Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106892 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 106951 Query: 612 ac 613 || Sbjct: 106952 ac 106953
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 912 bits (460), Expect = 0.0 Identities = 568/601 (94%), Gaps = 5/601 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 106035 cctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgca 106094 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||| ||||||||||||||||| ||||||||||||||| ||||||| |||||||||| Sbjct: 106095 aataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatcc 106153 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106154 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 106213 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106214 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 106273 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||| ||||||||||||||||| || ||||| ||||| Sbjct: 106274 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgttgcacc 106333 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 ||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 106334 ctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 106393 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106394 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 106453 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 106454 tgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 106513 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||| |||||||| | |||| ||||||||||||||| | | | | |||| Sbjct: 106514 gtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag-acgaggactct 106569 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106570 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 106629 Query: 613 c 613 | Sbjct: 106630 c 106630 Score = 862 bits (435), Expect = 0.0 Identities = 567/604 (93%), Gaps = 8/604 (1%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 135874 cctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgca 135815 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||| ||||||||||||||||| ||||||||||||||| ||||||| |||||||||| Sbjct: 135814 aataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatcc 135756 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135755 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 135696 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135695 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 135636 Query: 253 gggttgtgggagagc-aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 311 ||||||||||||||| ||||||||||| ||||||||||||||||| || ||||| |||| Sbjct: 135635 gggttgtgggagagcaaatacaagcgtcgtgctgctaggcgaagcagtggagtgttgcac 135576 Query: 312 cctagatggctaaagtccagtagccgaaagcatcactagcttatg-ctctgacccgagta 370 |||||||||| | |||||||||||||||||||||||||||||| | | |||||||||||| Sbjct: 135575 cctagatggcgagagtccagtagccgaaagcatcactagcttacgcccctgacccgagta 135516 Query: 371 gcatggggcacgtggaatcccgtgtgaatcag-caaggaccaccttgcaaggctaaatac 429 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 135515 gcatggggcacgtggaatcccgtgtgaatcagccaaggaccaccttgcaaggctaaatac 135456 Query: 430 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 489 ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| || Sbjct: 135455 tcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 135396 Query: 490 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 549 | ||||||||||||| |||||||| | |||| ||||||||||||||| | | | | | Sbjct: 135395 ggagtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag-acgaggac 135340 Query: 550 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 609 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135339 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 135280 Query: 610 gaac 613 |||| Sbjct: 135279 gaac 135276
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 912 bits (460), Expect = 0.0 Identities = 568/601 (94%), Gaps = 5/601 (0%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 136150 cctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgca 136091 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||| ||||||||||||||||| ||||||||||||||| ||||||| |||||||||| Sbjct: 136090 aataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatcc 136032 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136031 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 135972 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135971 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 135912 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||| ||||||||||||||||| || ||||| ||||| Sbjct: 135911 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgttgcacc 135852 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 ||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135851 ctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 135792 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135791 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 135732 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 135731 tgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 135672 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||| |||||||| | |||| ||||||||||||||| | | | | |||| Sbjct: 135671 gtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag-acgaggactct 135616 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135615 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 135556 Query: 613 c 613 | Sbjct: 135555 c 135555 Score = 912 bits (460), Expect = 0.0 Identities = 568/601 (94%), Gaps = 5/601 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 106257 cctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgca 106316 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||| ||||||||||||||||| ||||||||||||||| ||||||| |||||||||| Sbjct: 106317 aataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatcc 106375 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106376 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 106435 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106436 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 106495 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||| ||||||||||||||||| || ||||| ||||| Sbjct: 106496 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgttgcacc 106555 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 ||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 106556 ctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 106615 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106616 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 106675 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 106676 tgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 106735 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||| |||||||| | |||| ||||||||||||||| | | | | |||| Sbjct: 106736 gtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag-acgaggactct 106791 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106792 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 106851 Query: 613 c 613 | Sbjct: 106852 c 106852
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 908 bits (458), Expect = 0.0 Identities = 569/602 (94%), Gaps = 7/602 (1%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 135999 cctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaa 135940 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||| ||||||| |||||| |||||||| |||||| |||||||||| Sbjct: 135939 aataagcatagatccggggattcccgaatagggcaacctttcgaactgc-tgctgaatcc 135881 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135880 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 135821 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135820 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 135761 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcac 311 |||||||||||||||||||||||||| ||||||||||||||||| | || ||| |||| Sbjct: 135760 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcac 135701 Query: 312 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 371 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135700 cctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 135641 Query: 372 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135640 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 135581 Query: 432 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 491 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 135580 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 135521 Query: 492 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 551 ||||||||||||| |||||||| | |||||||||||||||||||| | || | ||| Sbjct: 135520 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctc 135466 Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135465 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 135406 Query: 612 ac 613 || Sbjct: 135405 ac 135404 Score = 908 bits (458), Expect = 0.0 Identities = 569/602 (94%), Gaps = 7/602 (1%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 106139 cctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaa 106198 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||| ||||||| |||||| |||||||| |||||| |||||||||| Sbjct: 106199 aataagcatagatccggggattcccgaatagggcaacctttcgaactgc-tgctgaatcc 106257 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106258 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 106317 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106318 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 106377 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcac 311 |||||||||||||||||||||||||| ||||||||||||||||| | || ||| |||| Sbjct: 106378 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcac 106437 Query: 312 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 371 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106438 cctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 106497 Query: 372 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106498 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 106557 Query: 432 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 491 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 106558 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 106617 Query: 492 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 551 ||||||||||||| |||||||| | |||||||||||||||||||| | || | ||| Sbjct: 106618 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctc 106672 Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106673 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 106732 Query: 612 ac 613 || Sbjct: 106733 ac 106734
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 908 bits (458), Expect = 0.0 Identities = 569/602 (94%), Gaps = 7/602 (1%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 135528 cctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaa 135469 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| |||||| |||||||| |||||| |||||||||| Sbjct: 135468 aataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatcc 135410 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135409 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 135350 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135349 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 135290 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcac 311 |||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| |||| Sbjct: 135289 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcac 135230 Query: 312 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 371 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 135229 cctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 135170 Query: 372 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135169 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 135110 Query: 432 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 491 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 135109 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 135050 Query: 492 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 551 ||||||||||||| |||||||| | |||||||||||||||||||| | || | ||| Sbjct: 135049 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctc 134995 Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 611 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 134994 tgaccgcgtgcctgttgaagaatgagccggcgactaataggcagtggcttggttaaggga 134935 Query: 612 ac 613 || Sbjct: 134934 ac 134933 Score = 908 bits (458), Expect = 0.0 Identities = 569/602 (94%), Gaps = 7/602 (1%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 105534 cctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaa 105593 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| |||||| |||||||| |||||| |||||||||| Sbjct: 105594 aataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatcc 105652 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105653 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 105712 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105713 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 105772 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcac 311 |||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| |||| Sbjct: 105773 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcac 105832 Query: 312 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 371 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 105833 cctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 105892 Query: 372 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105893 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 105952 Query: 432 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 491 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 105953 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 106012 Query: 492 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 551 ||||||||||||| |||||||| | |||||||||||||||||||| | || | ||| Sbjct: 106013 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctc 106067 Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 611 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 106068 tgaccgcgtgcctgttgaagaatgagccggcgactaataggcagtggcttggttaaggga 106127 Query: 612 ac 613 || Sbjct: 106128 ac 106129
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 906 bits (457), Expect = 0.0 Identities = 569/602 (94%), Gaps = 6/602 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 30 cctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 89 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||| ||||||||||||||||| ||||||||||||||| ||||||| |||||||||| Sbjct: 90 aataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatcc 148 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 149 atgggcaggcaagagacaacctaacgaactgaaacatcttagtagccagaggaaaagaaa 208 Query: 193 gcaaaagcgattcccgtagtagc-ggcgagcgaaatgggagcagcctaaaccgtgaaaac 251 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 209 gcaaaagcgattcccgtagtagcaggcgagcgaaatgggagcagcctaaaccgtgaaaac 268 Query: 252 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 311 ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| || Sbjct: 269 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgaagtgccgaac 328 Query: 312 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 371 |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 329 cctagatggctagagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 388 Query: 372 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 448 Query: 432 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 491 ||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 449 ctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccaccgggg 508 Query: 492 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 551 ||||||||||||| |||||||| | |||||||||||||||||||| | | | ||| Sbjct: 509 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcctg-gggctc 564 Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 565 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 624 Query: 612 ac 613 || Sbjct: 625 ac 626
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 896 bits (452), Expect = 0.0 Identities = 566/601 (94%), Gaps = 5/601 (0%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 131761 cctaggcacccagagacgaggaagggcgtattaatcgacgaaatgcttcggggagttgaa 131702 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||| |||||||||||||||| ||||||||||||||| |||| | |||||||||| Sbjct: 131701 aataagcagagatccggagattcccgaataggtcaacctttcgaacttc-tgctgaatcc 131643 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131642 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 131583 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131582 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 131523 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||| ||||||||||||||| | || |||||| | ||| Sbjct: 131522 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatcagtggagtgcggaacc 131463 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131462 ctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 131403 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131402 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 131343 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 131342 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 131283 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||| |||||||| | ||||| |||||||||||||||| | || | || Sbjct: 131282 gtgaaatagaacatgaaaccg---taagctctcaagcagtgggagggggaccaga-ccct 131227 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131226 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 131167 Query: 613 c 613 | Sbjct: 131166 c 131166 Score = 896 bits (452), Expect = 0.0 Identities = 566/601 (94%), Gaps = 5/601 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 101684 cctaggcacccagagacgaggaagggcgtattaatcgacgaaatgcttcggggagttgaa 101743 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||| |||||||||||||||| ||||||||||||||| |||| | |||||||||| Sbjct: 101744 aataagcagagatccggagattcccgaataggtcaacctttcgaacttc-tgctgaatcc 101802 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101803 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 101862 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101863 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 101922 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||| ||||||||||||||| | || |||||| | ||| Sbjct: 101923 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatcagtggagtgcggaacc 101982 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101983 ctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 102042 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102043 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 102102 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 102103 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 102162 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||| |||||||| | ||||| |||||||||||||||| | || | || Sbjct: 102163 gtgaaatagaacatgaaaccg---taagctctcaagcagtgggagggggaccaga-ccct 102218 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102219 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 102278 Query: 613 c 613 | Sbjct: 102279 c 102279
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 892 bits (450), Expect = 0.0 Identities = 567/602 (94%), Gaps = 7/602 (1%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 139474 cctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 139415 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||| ||||||||||||||||| ||||||||||||||| |||||| |||||||||| Sbjct: 139414 aataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatcc 139356 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 139355 atgggcagacaagagacaacctggcgaactgaaacatcttagtagccggaggaaaagaaa 139296 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139295 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 139236 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 ||||||||||||||||||| |||||| |||||||||||||||||||| ||||||| ||| Sbjct: 139235 gggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaagtgccgaacc 139176 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 ||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 139175 ctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 139116 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139115 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 139056 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| | Sbjct: 139055 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccgtcgggga 138996 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtgatctc 551 |||||||||||| |||||||| | |||||||||||||||||||| | || | ||| Sbjct: 138995 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccaggg--ctc 138941 Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138940 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 138881 Query: 612 ac 613 || Sbjct: 138880 ac 138879 Score = 892 bits (450), Expect = 0.0 Identities = 567/602 (94%), Gaps = 7/602 (1%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 109623 cctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 109682 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||| ||||||||||||||||| ||||||||||||||| |||||| |||||||||| Sbjct: 109683 aataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatcc 109741 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 109742 atgggcagacaagagacaacctggcgaactgaaacatcttagtagccggaggaaaagaaa 109801 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109802 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 109861 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 ||||||||||||||||||| |||||| |||||||||||||||||||| ||||||| ||| Sbjct: 109862 gggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaagtgccgaacc 109921 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 ||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 109922 ctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 109981 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109982 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 110041 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| | Sbjct: 110042 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccgtcgggga 110101 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtgatctc 551 |||||||||||| |||||||| | |||||||||||||||||||| | || | ||| Sbjct: 110102 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccaggg--ctc 110156 Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110157 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 110216 Query: 612 ac 613 || Sbjct: 110217 ac 110218
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 892 bits (450), Expect = 0.0 Identities = 568/602 (94%), Gaps = 8/602 (1%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 5 cctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaa 64 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| |||||| |||||||| |||||| |||||||||| Sbjct: 65 aataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatcc 123 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcac 311 |||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| |||| Sbjct: 244 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcac 303 Query: 312 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 371 || | ||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 304 cc-atatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 362 Query: 372 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 363 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 422 Query: 432 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 491 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 423 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 482 Query: 492 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 551 ||||||||||||| |||||||| | |||||||||||||||||||| | || | ||| Sbjct: 483 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctc 537 Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 538 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 597 Query: 612 ac 613 || Sbjct: 598 ac 599
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 890 bits (449), Expect = 0.0 Identities = 562/598 (93%), Gaps = 4/598 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 31 cctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaa 90 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| ||| ||| |||||||| |||||| |||||||| | Sbjct: 91 aataagcatagatccggagattcccgaatgggttaaccttttgaactgc-tgctgaattc 149 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150 ataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 209 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 210 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacg 269 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 ||||||||||||||||||| ||| |||||| ||||||||||||||||||||| ||||||| Sbjct: 270 gggttgtgggagagcaatataagtgttgtgttgctaggcgaagcggttgagtcccgcacc 329 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 | |||||| | |||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 330 ccagatggtgagagtccagtagccgaaagcatcactagcttacgctctaacccgagtagc 389 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 390 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 449 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 450 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggga 509 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||| |||||||| | |||||||||||||||||||| ||| ||||||| Sbjct: 510 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcggatctct 566 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 610 |||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||| Sbjct: 567 gaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggttaaggg 624
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 888 bits (448), Expect = 0.0 Identities = 568/604 (94%), Gaps = 7/604 (1%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 139683 cctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 139624 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||| ||||||||||||||||| ||||||||||||||| |||||| |||||||||| Sbjct: 139623 aataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatcc 139565 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139564 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 139505 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139504 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 139445 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcac 311 |||||||||||||||||||||||||| ||||||||||||||||| || || ||| |||| Sbjct: 139444 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgcgaatgctgcac 139385 Query: 312 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 371 ||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 139384 cctagatggtgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 139325 Query: 372 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139324 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 139265 Query: 432 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 491 |||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 139264 ctgggtgacccatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 139205 Query: 492 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga--aagtgatc 549 ||||||||||||| |||||||| | |||||||||||||||||||| || | | | Sbjct: 139204 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagactactaggac 139148 Query: 550 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 609 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139147 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 139088 Query: 610 gaac 613 |||| Sbjct: 139087 gaac 139084 Score = 888 bits (448), Expect = 0.0 Identities = 568/604 (94%), Gaps = 7/604 (1%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 109616 cctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 109675 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||| ||||||||||||||||| ||||||||||||||| |||||| |||||||||| Sbjct: 109676 aataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatcc 109734 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109735 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 109794 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109795 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 109854 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcac 311 |||||||||||||||||||||||||| ||||||||||||||||| || || ||| |||| Sbjct: 109855 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgcgaatgctgcac 109914 Query: 312 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 371 ||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 109915 cctagatggtgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 109974 Query: 372 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109975 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 110034 Query: 432 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 491 |||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 110035 ctgggtgacccatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 110094 Query: 492 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga--aagtgatc 549 ||||||||||||| |||||||| | |||||||||||||||||||| || | | | Sbjct: 110095 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagactactaggac 110151 Query: 550 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 609 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110152 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 110211 Query: 610 gaac 613 |||| Sbjct: 110212 gaac 110215
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 868 bits (438), Expect = 0.0 Identities = 564/602 (93%), Gaps = 7/602 (1%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 142849 cctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 142790 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||| |||||||||||||||| ||| ||||||||||| |||||| |||||||||| Sbjct: 142789 aataagcgcagatccggagattcccgaatgggtcaacctttcgaactgc-tgctgaatcc 142731 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142730 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 142671 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142670 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 142611 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg-agtgccgcac 311 |||||||||||||| |||||||||| ||||||||||||||||| | || ||||| |||| Sbjct: 142610 gggttgtgggagagtcatacaagcgtcgtgctgctaggcgaagcagctggagtgctgcac 142551 Query: 312 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 371 ||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 142550 cctagatggtgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 142491 Query: 372 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 431 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 142490 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactc 142431 Query: 432 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 491 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 142430 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 142371 Query: 492 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 551 ||||||||||||| |||||||| | ||||||||||||||||||| | || | ||| Sbjct: 142370 agtgaaatagaacatgaaaccg---taggctcccaagcagtgggaggagccaggg--ctc 142316 Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142315 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 142256 Query: 612 ac 613 || Sbjct: 142255 ac 142254 Score = 868 bits (438), Expect = 0.0 Identities = 564/602 (93%), Gaps = 7/602 (1%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 110479 cctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 110538 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||| |||||||||||||||| ||| ||||||||||| |||||| |||||||||| Sbjct: 110539 aataagcgcagatccggagattcccgaatgggtcaacctttcgaactgc-tgctgaatcc 110597 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110598 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 110657 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110658 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 110717 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg-agtgccgcac 311 |||||||||||||| |||||||||| ||||||||||||||||| | || ||||| |||| Sbjct: 110718 gggttgtgggagagtcatacaagcgtcgtgctgctaggcgaagcagctggagtgctgcac 110777 Query: 312 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 371 ||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 110778 cctagatggtgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 110837 Query: 372 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 431 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 110838 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactc 110897 Query: 432 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 491 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 110898 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 110957 Query: 492 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 551 ||||||||||||| |||||||| | ||||||||||||||||||| | || | ||| Sbjct: 110958 agtgaaatagaacatgaaaccg---taggctcccaagcagtgggaggagccaggg--ctc 111012 Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111013 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 111072 Query: 612 ac 613 || Sbjct: 111073 ac 111074
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 864 bits (436), Expect = 0.0 Identities = 561/600 (93%), Gaps = 6/600 (1%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 4261 cctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 4320 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||| ||||||| ||||||||||||||| |||||| |||||||| | Sbjct: 4321 aataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-tgctgaattc 4379 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4380 acgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 4439 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 4440 gcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacg 4499 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||| ||| ||||||||||||| | || || ||||| Sbjct: 4500 gggttgtgggagagcaatacaagcgtcgtgttgctaggcgaagcaatcgaatgttgcacc 4559 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4560 ctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 4619 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4620 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 4679 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||| |||||||||||||||||||||||||||||||||||| ||| | Sbjct: 4680 tgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctgtcgggga 4739 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||| |||||||| | |||||||||||||||||||| | | | |||| Sbjct: 4740 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagctgggg--ctct 4794 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4795 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 4854
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 864 bits (436), Expect = 0.0 Identities = 561/600 (93%), Gaps = 6/600 (1%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 23664 cctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 23605 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||| ||||||| ||||||||||||||| |||||| |||||||| | Sbjct: 23604 aataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-tgctgaattc 23546 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23545 acgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 23486 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 23485 gcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacg 23426 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||| ||| ||||||||||||| | || || ||||| Sbjct: 23425 gggttgtgggagagcaatacaagcgtcgtgttgctaggcgaagcaatcgaatgttgcacc 23366 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23365 ctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 23306 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23305 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 23246 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||| |||||||||||||||||||||||||||||||||||| ||| | Sbjct: 23245 tgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctgtcgggga 23186 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||| |||||||| | |||||||||||||||||||| | | | |||| Sbjct: 23185 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagctgggg--ctct 23131 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23130 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 23071
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 864 bits (436), Expect = 0.0 Identities = 562/600 (93%), Gaps = 7/600 (1%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 4530 cctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 4589 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||| ||||||| ||||||||||||||| |||||| |||||||| | Sbjct: 4590 aataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-tgctgaattc 4648 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4649 acgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 4708 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4709 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 4768 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||| ||||||||||||||||| || || || ||||| Sbjct: 4769 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtcgaatgttgcacc 4828 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 4829 ctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtaac 4888 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4889 atggggcacgtgaaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 4948 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||| |||||||||||||||||||||||||||||||||||| | ||| | Sbjct: 4949 tgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctggcgggga 5008 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||| |||||||| | ||||||||| |||||||||| | | | |||| Sbjct: 5009 gtgaaatagaacatgaaaccg---taagctcccaa-cagtgggaggagctgggg--ctct 5062 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5063 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 5122
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 864 bits (436), Expect = 0.0 Identities = 562/600 (93%), Gaps = 7/600 (1%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 4530 cctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 4589 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||| ||||||| ||||||||||||||| |||||| |||||||| | Sbjct: 4590 aataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-tgctgaattc 4648 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4649 acgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 4708 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4709 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 4768 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||| ||||||||||||||||| || || || ||||| Sbjct: 4769 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtcgaatgttgcacc 4828 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 4829 ctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtaac 4888 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4889 atggggcacgtgaaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 4948 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||| |||||||||||||||||||||||||||||||||||| | ||| | Sbjct: 4949 tgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctggcgggga 5008 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||| |||||||| | ||||||||| |||||||||| | | | |||| Sbjct: 5009 gtgaaatagaacatgaaaccg---taagctcccaa-cagtgggaggagctgggg--ctct 5062 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5063 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 5122
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 862 bits (435), Expect = 0.0 Identities = 563/603 (93%), Gaps = 6/603 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 86292 cctaggcacccagagacgaggaagggcgtggtaagcgacgaaatgcttcggggagttgaa 86351 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||| ||||||||||||||||||||| ||||||| |||| ||| |||||| |||||||||| Sbjct: 86352 aatgagcatagatccggagattcccgaataggttaacccttttaactgc-tgctgaatcc 86410 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 86411 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaatagaaa 86470 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 86471 gcaaaagcgattcccgtagtagtggcgagcgaaatgggagcagcctaaaccgtgaaaacg 86530 Query: 253 gggttgtgggagagc--aatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 310 ||||||||||||||| |||| |||| |||||||||||||||||||||||||| | ||| Sbjct: 86531 gggttgtgggagagcccaatataagctctgtgctgctaggcgaagcggttgagtcctgca 86590 Query: 311 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 370 |||||||||| | |||||||||||||||||||||| | ||||| ||||| ||||||||| Sbjct: 86591 ccctagatggtgagagtccagtagccgaaagcatcattggcttacgctctaacccgagta 86650 Query: 371 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86651 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 86710 Query: 431 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 490 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 86711 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggg 86770 Query: 491 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 550 ||||||||||||| |||||||| | |||||||||||||||||||| || ||||| Sbjct: 86771 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaaaattagatct 86827 Query: 551 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 610 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 86828 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaaggg 86887 Query: 611 aac 613 ||| Sbjct: 86888 aac 86890
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 862 bits (435), Expect = 0.0 Identities = 563/603 (93%), Gaps = 6/603 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 88378 cctaggcacccagagacgaggaagggcgtggtaagcgacgaaatgcttcggggagttgaa 88437 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||| ||||||||||||||||||||| ||||||| |||||||| ||||| |||||||||| Sbjct: 88438 aattagcatagatccggagattcccgaataggttaacctttttcactgc-tgctgaatcc 88496 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 88497 atgggcaggcaagagacaacctggtgaactgaaacatcttagtagccagaggaatagaaa 88556 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88557 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 88616 Query: 253 gggttgtgggagagca--atacaagcgttgtgctgctaggcgaagcggttgagtgccgca 310 |||||||||||||||| ||| |||| |||||||||||||||||||||||||| | ||| Sbjct: 88617 gggttgtgggagagcacaatataagctctgtgctgctaggcgaagcggttgagtcctgca 88676 Query: 311 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 370 |||||||||| | |||||||||||||||||||||| | ||||| ||||| ||||||||| Sbjct: 88677 ccctagatggtgagagtccagtagccgaaagcatcattggcttacgctctaacccgagta 88736 Query: 371 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88737 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 88796 Query: 431 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 490 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 88797 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggg 88856 Query: 491 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 550 ||||||||||||| |||||||| | |||||||||||||||||||| || ||||| Sbjct: 88857 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaaaattagatct 88913 Query: 551 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 610 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 88914 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaaggg 88973 Query: 611 aac 613 ||| Sbjct: 88974 aac 88976
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 856 bits (432), Expect = 0.0 Identities = 567/604 (93%), Gaps = 10/604 (1%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| || | ||||||||||||||||||||||| Sbjct: 1797 cctaggcacccagagacgaggaagggcgtagtaatc-acgaaatgcttcggggagttgaa 1855 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| |||||| |||||||| |||||| |||||||||| Sbjct: 1856 aataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatcc 1914 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1915 atgggcaggcaagagacaacctggcgaactgaaccatcttagtagccagaggaaaagaaa 1974 Query: 193 gcaaaag-cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 251 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1975 gcaaaaggcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 2034 Query: 252 ggggttgtgggagagcaatacaagc-gttgtgctgctaggcgaagc-ggttgagtgccgc 309 ||||||||||||||||||||||||| | ||||||||||||||||| | || ||| || Sbjct: 2035 ggggttgtgggagagcaatacaagcggccgtgctgctaggcgaagcagcccgaatgctgc 2094 Query: 310 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 369 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2095 accctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 2154 Query: 370 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2155 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 2214 Query: 430 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 489 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 2215 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 2274 Query: 490 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 549 | ||||||||||||| |||||||| | |||||||||||||||||||| | || | | Sbjct: 2275 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--c 2329 Query: 550 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 609 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2330 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 2389 Query: 610 gaac 613 |||| Sbjct: 2390 gaac 2393
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 854 bits (431), Expect = 0.0 Identities = 562/602 (93%), Gaps = 8/602 (1%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 526 cctaggcacccagagacgaggaagggcgtattaatcgacgaaatgcttcggggagttgaa 585 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||| |||||||||||||||| |||||| |||||||| |||| | |||||||||| Sbjct: 586 aataagccgagatccggagattcccgaatagggcaacctttcgaacttc-tgctgaatcc 644 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 645 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 704 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 705 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 764 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||| ||||||||||||||| | || |||||| | ||| Sbjct: 765 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtggagtgcggtacc 824 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 825 ctagatggtgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 884 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 885 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 944 Query: 433 tgggtgaccgatagcgaagtagta-ccgtgagggaaaggtgaaaagaacccccagtgggt 491 ||||||||||||||| || ||||| ||||||||||||||||||||||||||||| ||| Sbjct: 945 tgggtgaccgatagccaaatagtacccgtgagggaaaggtgaaaagaacccccatcgggg 1004 Query: 492 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 551 ||||||||||||| |||||||| | ||||| |||||||||||||| || || ||| Sbjct: 1005 agtgaaatagaacatgaaaccg---taagctctcaagcagtgggaggagacag---gctc 1058 Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1059 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 1118 Query: 612 ac 613 || Sbjct: 1119 ac 1120
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 842 bits (425), Expect = 0.0 Identities = 502/526 (95%), Gaps = 4/526 (0%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||| Sbjct: 130505 cctaggcacccagagacgaggaggggcgtagtaagcgacgaaatgcttcggggagttgaa 130446 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| ||||||||||||||| |||| | |||||||||| Sbjct: 130445 aataagcatagatccggagattcccgaataggtcaacctttcgaactac-tgctgaatcc 130387 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130386 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 130327 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130326 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 130267 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 ||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 130266 gggttgtgggagagctatacaagcgtcgtgctgctaggcgaagcggtggagtgccgcacc 130207 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130206 ctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 130147 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130146 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 130087 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 130086 tgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 130027 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 538 |||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 130026 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 129984 Score = 842 bits (425), Expect = 0.0 Identities = 502/526 (95%), Gaps = 4/526 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||| Sbjct: 101951 cctaggcacccagagacgaggaggggcgtagtaagcgacgaaatgcttcggggagttgaa 102010 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| ||||||||||||||| |||| | |||||||||| Sbjct: 102011 aataagcatagatccggagattcccgaataggtcaacctttcgaactac-tgctgaatcc 102069 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102070 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 102129 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102130 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 102189 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 ||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 102190 gggttgtgggagagctatacaagcgtcgtgctgctaggcgaagcggtggagtgccgcacc 102249 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102250 ctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 102309 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102310 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 102369 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 |||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 102370 tgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 102429 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 538 |||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 102430 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 102472 Score = 119 bits (60), Expect = 1e-23 Identities = 63/64 (98%) Strand = Plus / Minus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 608 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 129969 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 129910 Query: 609 ggaa 612 |||| Sbjct: 129909 ggaa 129906 Score = 119 bits (60), Expect = 1e-23 Identities = 63/64 (98%) Strand = Plus / Plus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 608 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 102487 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 102546 Query: 609 ggaa 612 |||| Sbjct: 102547 ggaa 102550
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 842 bits (425), Expect = 0.0 Identities = 564/603 (93%), Gaps = 12/603 (1%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 130 cctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaa 189 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| |||||| |||||||| |||||| |||||||||| Sbjct: 190 aataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatcc 248 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagt-agccagaggaaaagaa 191 ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 249 atgggcaggcaagagacaacctggcgaactgaaacatcttagtgagccagaggaaaagaa 308 Query: 192 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 309 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 368 Query: 252 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag-cggttgagtgccgca 310 ||| ||||||||||||||||||||||| |||||||||||||||| || || ||| ||| Sbjct: 369 ggg-ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagacgcccgaatgctgca 427 Query: 311 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 370 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 428 ccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 487 Query: 371 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 430 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 488 gcatggggcacgtggaatcccgtgtgaatcgacaaggaccaccttgcaaggctaaatact 547 Query: 431 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 490 ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||| Sbjct: 548 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa-ccccatcggg 606 Query: 491 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 550 ||||||||||||| |||||||| | |||||||||||||||||||| | | || Sbjct: 607 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggcca----gggct 659 Query: 551 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 610 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 660 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 719 Query: 611 aac 613 ||| Sbjct: 720 aac 722
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 841 bits (424), Expect = 0.0 Identities = 427/428 (99%) Strand = Plus / Plus Query: 189 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 60 Query: 249 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 120 Query: 309 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 368 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 121 caccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgag 180 Query: 369 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 240 Query: 429 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 300 Query: 489 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 360 Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 608 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 420 Query: 609 ggaacgga 616 |||||||| Sbjct: 421 ggaacgga 428
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 841 bits (424), Expect = 0.0 Identities = 564/604 (93%), Gaps = 9/604 (1%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 131841 cctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 131782 Query: 73 aataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcctgctgaatc 131 ||||||| ||||||||| ||||||| | |||||||||||||| |||||| ||||||||| Sbjct: 131781 aataagcgtagatccggggattcccgatataggtcaacctttcgaactgc-tgctgaatc 131723 Query: 132 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 191 || | |||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 131722 cacgggcaggcaagagacaacctggtgaactgaaacatcttagtagccagaggaaaagaa 131663 Query: 192 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131662 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 131603 Query: 252 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag--tgccgc 309 |||||||||||||||| ||||||| || ||||||||||||||||| | ||| ||| || Sbjct: 131602 ggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagagaatgctgc 131543 Query: 310 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 369 |||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 131542 accctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagt 131483 Query: 370 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131482 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 131423 Query: 430 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 489 ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| || Sbjct: 131422 tcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 131363 Query: 490 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtgat 548 | ||||||||||||| |||||||| | |||||||||||||||||||| || | || Sbjct: 131362 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaggctcggga- 131307 Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 608 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131306 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 131247 Query: 609 ggaa 612 |||| Sbjct: 131246 ggaa 131243 Score = 841 bits (424), Expect = 0.0 Identities = 564/604 (93%), Gaps = 9/604 (1%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 103553 cctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 103612 Query: 73 aataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcctgctgaatc 131 ||||||| ||||||||| ||||||| | |||||||||||||| |||||| ||||||||| Sbjct: 103613 aataagcgtagatccggggattcccgatataggtcaacctttcgaactgc-tgctgaatc 103671 Query: 132 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 191 || | |||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 103672 cacgggcaggcaagagacaacctggtgaactgaaacatcttagtagccagaggaaaagaa 103731 Query: 192 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103732 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 103791 Query: 252 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag--tgccgc 309 |||||||||||||||| ||||||| || ||||||||||||||||| | ||| ||| || Sbjct: 103792 ggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagagaatgctgc 103851 Query: 310 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 369 |||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 103852 accctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagt 103911 Query: 370 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103912 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 103971 Query: 430 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 489 ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| || Sbjct: 103972 tcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 104031 Query: 490 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtgat 548 | ||||||||||||| |||||||| | |||||||||||||||||||| || | || Sbjct: 104032 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaggctcggga- 104087 Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 608 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104088 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 104147 Query: 609 ggaa 612 |||| Sbjct: 104148 ggaa 104151
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 837 bits (422), Expect = 0.0 Identities = 558/601 (92%), Gaps = 7/601 (1%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 38 cctaggcacccagagacgaggaagggcgtattaatcgacgaaatgcttcggggagttgaa 97 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||| |||||||||||||||| |||||| |||||||| |||| | |||||||||| Sbjct: 98 aataagccgagatccggagattcccgaatagggcaacctttcgaacttc-tgctgaatcc 156 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 157 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 216 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 217 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 276 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||| ||||||||||||||| | || |||||| | ||| Sbjct: 277 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtggagtgcggtacc 336 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 337 ctagatggtgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 396 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 397 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 456 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||| | Sbjct: 457 tgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccccatcgggga 516 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||| ||| |||||||| | ||||| |||||||||||||| || || |||| Sbjct: 517 gtgaaataaaacatgaaaccg---taagctctcaagcagtgggaggagacag---gctct 570 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 || ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 571 gaacgcgtgcctgttgaaaaatgagccggcgactcatacgcagtggcttggttaagggaa 630 Query: 613 c 613 | Sbjct: 631 c 631
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 837 bits (422), Expect = 0.0 Identities = 425/426 (99%) Strand = Plus / Plus Query: 191 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 251 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 311 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 370 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 371 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 431 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 491 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360 Query: 551 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 610 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 420 Query: 611 aacgga 616 |||||| Sbjct: 421 aacgga 426
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 837 bits (422), Expect = 0.0 Identities = 425/426 (99%) Strand = Plus / Plus Query: 191 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 251 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 311 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 370 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 371 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 431 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 491 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360 Query: 551 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 610 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 420 Query: 611 aacgga 616 |||||| Sbjct: 421 aacgga 426
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 835 bits (421), Expect = 0.0 Identities = 501/526 (95%), Gaps = 4/526 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 38 cctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 97 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||| ||||||||||||||||| ||||||||||||||| ||||||| |||||||||| Sbjct: 98 aataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatcc 156 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 157 atgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaa 216 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 217 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 276 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||| Sbjct: 277 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcacc 336 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 ||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 337 ctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 396 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 397 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 456 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||| | Sbjct: 457 tgggtgaccgatagcgaagtactaccgtgagggaagggtgaaaagaacccccatcgggga 516 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 538 |||||||| ||| |||||||| | |||||||||||||||||||| Sbjct: 517 gtgaaataaaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 583 gactcataggcagtggcttggttaagggaac 613 ||||||||| |||||||||||||||||||| Sbjct: 592 gactcatagtaagtggcttggttaagggaac 622
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 835 bits (421), Expect = 0.0 Identities = 501/526 (95%), Gaps = 4/526 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 38 cctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 97 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||| ||||||||||||||||| ||||||||||||||| ||||||| |||||||||| Sbjct: 98 aataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatcc 156 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 157 atgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaa 216 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 217 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 276 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||| Sbjct: 277 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcacc 336 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 ||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 337 ctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 396 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 397 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 456 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||| ||||||||||||| ||||||||||||||||| || | Sbjct: 457 tgggtgaccgatagcgaagtactaccgtgagggaagggtgaaaagaacccccatccggga 516 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 538 |||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 517 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 105 bits (53), Expect = 2e-19 Identities = 62/65 (95%) Strand = Plus / Plus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 608 |||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaagaattaaccggcgactcataggcagtggcttggttaag 640 Query: 609 ggaac 613 ||||| Sbjct: 641 ggaac 645
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 835 bits (421), Expect = 0.0 Identities = 424/425 (99%) Strand = Plus / Plus Query: 192 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 Query: 252 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 Query: 312 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 371 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 180 Query: 372 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 Query: 432 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 Query: 492 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 Query: 612 acgga 616 ||||| Sbjct: 421 acgga 425
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 835 bits (421), Expect = 0.0 Identities = 424/425 (99%) Strand = Plus / Plus Query: 192 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 63 Query: 252 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 123 Query: 312 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 371 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 124 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 183 Query: 372 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 243 Query: 432 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 303 Query: 492 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 363 Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 423 Query: 612 acgga 616 ||||| Sbjct: 424 acgga 428
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 831 bits (419), Expect = 0.0 Identities = 422/423 (99%) Strand = Plus / Plus Query: 194 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 60 Query: 254 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 120 Query: 314 tagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 373 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 121 tagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagca 180 Query: 374 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 240 Query: 434 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 300 Query: 494 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 360 Query: 554 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac 613 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac 420 Query: 614 gga 616 ||| Sbjct: 421 gga 423
>dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G06, full insert sequence Length = 1707 Score = 829 bits (418), Expect = 0.0 Identities = 424/426 (99%) Strand = Plus / Plus Query: 71 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 130 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1 aaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaat 60 Query: 131 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 120 Query: 191 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 180 Query: 251 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 240 Query: 311 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 370 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 241 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 300 Query: 371 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 360 Query: 431 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 420 Query: 491 tagtga 496 |||||| Sbjct: 421 tagtga 426
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 827 bits (417), Expect = 0.0 Identities = 500/526 (95%), Gaps = 4/526 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||| |||||||||| || ||||||||||||||||||||||||| Sbjct: 46282 cctaggcacccagagacgaagaagggcgtattaatcgacgaaatgcttcggggagttgaa 46341 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||| Sbjct: 46342 aataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatcc 46400 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 46401 atgggcaggcaagagacaacctggcgaactgaaacatcttactagccagaggaaaagaaa 46460 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 46461 gcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacg 46520 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||| Sbjct: 46521 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtaccgcacc 46580 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46581 ctagatggctagagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 46640 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46641 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 46700 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 46701 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 46760 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 538 |||||||||||| |||||||| | ||||| |||||||||||||| Sbjct: 46761 gtgaaatagaacatgaaaccg---taagctctcaagcagtgggagg 46803 Score = 129 bits (65), Expect = 1e-26 Identities = 65/65 (100%) Strand = Plus / Plus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 608 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46818 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 46877 Query: 609 ggaac 613 ||||| Sbjct: 46878 ggaac 46882
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 827 bits (417), Expect = 0.0 Identities = 500/526 (95%), Gaps = 4/526 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 38 cctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 97 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||| ||||||||||||||||| ||||||||||||||| ||||||| |||||||||| Sbjct: 98 aataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatcc 156 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 157 atgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaa 216 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 217 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 276 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||| Sbjct: 277 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcacc 336 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 ||||||||| | ||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 337 ctagatggcgagagtccagtagccgaaagcatccctagcttacgctctgacccgagtagc 396 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 397 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 456 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||| ||||||||||||| ||||||||||||||||| || | Sbjct: 457 tgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccccatccggga 516 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 538 |||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 517 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 61.9 bits (31), Expect = 2e-06 Identities = 53/59 (89%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 607 |||||| ||||||||||||||| ||||| || |||| ||||| |||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaaaaatga-cccgcgaatcataagcagtggcttggttaa 638
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 827 bits (417), Expect = 0.0 Identities = 500/526 (95%), Gaps = 4/526 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 38 cctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 97 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||| ||||||||||||||||| ||||||||||||||| ||||||| |||||||||| Sbjct: 98 aataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatcc 156 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 157 atgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaa 216 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 217 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 276 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||| Sbjct: 277 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcacc 336 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 ||||||||| | ||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 337 ctagatggcgagagtccagtagccgaaagcatccctagcttacgctctgacccgagtagc 396 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 397 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 456 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||| | Sbjct: 457 tgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccccatcgggga 516 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 538 |||||||| ||| |||||||| | |||||||||||||||||||| Sbjct: 517 gtgaaataaaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 81.8 bits (41), Expect = 2e-12 Identities = 60/65 (92%), Gaps = 1/65 (1%) Strand = Plus / Plus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 608 |||||| |||||||||||| || ||||||||| ||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgtttaaaaatgagccg-cgactcataggaagtggcttggttaag 639 Query: 609 ggaac 613 ||||| Sbjct: 640 ggaac 644
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 827 bits (417), Expect = 0.0 Identities = 500/526 (95%), Gaps = 4/526 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||| Sbjct: 38 cctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggggttgaa 97 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||| ||||||||||||||||| ||||||||||||||| ||||||| |||||||||| Sbjct: 98 aataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatcc 156 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 157 atgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaa 216 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 217 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 276 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||| Sbjct: 277 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcacc 336 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 ||||||||| | ||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 337 ctagatggcgagagtccagtagccgaaagcatccctagcttacgctctgacccgagtagc 396 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 397 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 456 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||| | Sbjct: 457 tgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccccatcgggga 516 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 538 |||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 517 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 97.6 bits (49), Expect = 4e-17 Identities = 62/65 (95%), Gaps = 1/65 (1%) Strand = Plus / Plus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 608 |||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaa-aatgagccggcgactcataggaagtggcttggttaag 639 Query: 609 ggaac 613 ||||| Sbjct: 640 ggaac 644
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 821 bits (414), Expect = 0.0 Identities = 558/602 (92%), Gaps = 7/602 (1%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||| |||| || ||||||||||||||||||||||||| Sbjct: 52656 cctaggcacccagagacgaggaaggatgtagtaatcgacgaaatgcttcggggagttgaa 52597 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| |||||| ||||||||| |||||| |||||||||| Sbjct: 52596 aataagcatagatccggagattcccgaatagggcaaccttttgaactgc-tgctgaatcc 52538 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52537 atgggcagacaagagataacctggcgaactgaaacatcttagtagccagaggaaaagaaa 52478 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 52477 gcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgcgaaaacg 52418 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttgagtgccgcac 311 ||||||||||||||||||| ||| || ||||||||||||||| | | |||| ||| |||| Sbjct: 52417 gggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttgaatgctgcac 52358 Query: 312 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 371 |||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 52357 cctagatggcgaaagtccagtagccgaaagcatcattagcttgtgctctgacccgagtag 52298 Query: 372 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 431 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52297 catgggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 52238 Query: 432 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 491 |||||| |||||||| ||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 52237 ctgggtaaccgatagttaagtagtaccgtgagggaagggtgaaaagaacccccattgggg 52178 Query: 492 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 551 ||||||||||||| |||||||| | |||||||||||||||||||| | || | ||| Sbjct: 52177 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctc 52123 Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 611 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 52122 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaaggga 52063 Query: 612 ac 613 || Sbjct: 52062 ac 52061 Score = 821 bits (414), Expect = 0.0 Identities = 558/602 (92%), Gaps = 7/602 (1%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||| |||| || ||||||||||||||||||||||||| Sbjct: 37172 cctaggcacccagagacgaggaaggatgtagtaatcgacgaaatgcttcggggagttgaa 37231 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| |||||| ||||||||| |||||| |||||||||| Sbjct: 37232 aataagcatagatccggagattcccgaatagggcaaccttttgaactgc-tgctgaatcc 37290 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37291 atgggcagacaagagataacctggcgaactgaaacatcttagtagccagaggaaaagaaa 37350 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 37351 gcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgcgaaaacg 37410 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttgagtgccgcac 311 ||||||||||||||||||| ||| || ||||||||||||||| | | |||| ||| |||| Sbjct: 37411 gggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttgaatgctgcac 37470 Query: 312 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 371 |||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 37471 cctagatggcgaaagtccagtagccgaaagcatcattagcttgtgctctgacccgagtag 37530 Query: 372 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 431 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37531 catgggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 37590 Query: 432 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 491 |||||| |||||||| ||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 37591 ctgggtaaccgatagttaagtagtaccgtgagggaagggtgaaaagaacccccattgggg 37650 Query: 492 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 551 ||||||||||||| |||||||| | |||||||||||||||||||| | || | ||| Sbjct: 37651 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctc 37705 Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 611 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 37706 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaaggga 37765 Query: 612 ac 613 || Sbjct: 37766 ac 37767
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 821 bits (414), Expect = 0.0 Identities = 558/602 (92%), Gaps = 7/602 (1%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||| |||| || ||||||||||||||||||||||||| Sbjct: 4100 cctaggcacccagagacgaggaaggatgtagtaatcgacgaaatgcttcggggagttgaa 4159 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| |||||| ||||||||| |||||| |||||||||| Sbjct: 4160 aataagcatagatccggagattcccgaatagggcaaccttttgaactgc-tgctgaatcc 4218 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4219 atgggcagacaagagataacctggcgaactgaaacatcttagtagccagaggaaaagaaa 4278 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 4279 gcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgcgaaaacg 4338 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttgagtgccgcac 311 ||||||||||||||||||| ||| || ||||||||||||||| | | |||| ||| |||| Sbjct: 4339 gggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttgaatgctgcac 4398 Query: 312 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 371 |||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 4399 cctagatggcgaaagtccagtagccgaaagcatcattagcttgtgctctgacccgagtag 4458 Query: 372 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 431 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4459 catgggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 4518 Query: 432 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 491 |||||| |||||||| ||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 4519 ctgggtaaccgatagttaagtagtaccgtgagggaagggtgaaaagaacccccattgggg 4578 Query: 492 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 551 ||||||||||||| |||||||| | |||||||||||||||||||| | || | ||| Sbjct: 4579 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctc 4633 Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 611 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 4634 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaaggga 4693 Query: 612 ac 613 || Sbjct: 4694 ac 4695
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 815 bits (411), Expect = 0.0 Identities = 559/607 (92%), Gaps = 10/607 (1%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||| ||| |||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 128416 cctaggcactcagagacgaggaagggcgtagcaatcgacgaaatgcttcggggagctgaa 128357 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 || |||||||||||||||||||||| ||||||| |||||||| |||||| |||||||| | Sbjct: 128356 aacaagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaattc 128298 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 128297 ataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaggaaa 128238 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 ||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||| Sbjct: 128237 gcaaacgcgattcccgtagtagcggcgagcgaagtgggagtagcctaaaccgtgaaaacg 128178 Query: 253 gggttgtgggagagc------aatacaagcgttgtgctgctaggcgaagcggttgagtgc 306 |||||||||| |||| ||||||||| ||||||||||||||||||||||||||| | Sbjct: 128177 gggttgtgggggagcgatacaaatacaagctttgtgctgctaggcgaagcggttgagtcc 128118 Query: 307 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 366 ||||||||||||||| | |||||||||||||||||||||||||||| | ||||| |||| Sbjct: 128117 cgcaccctagatggcaagagtccagtagccgaaagcatcactagctcacgctctaaccca 128058 Query: 367 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128057 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 127998 Query: 427 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 486 ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| Sbjct: 127997 tactcctgggtgaccgatagcgaagcagtaccgtgagggaagggtgaaaagaacccccat 127938 Query: 487 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 546 ||| ||||||||||||| |||||||| | |||||||||||||||||||| ||| | Sbjct: 127937 aggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaattgg 127881 Query: 547 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 606 |||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 127880 atctctgaccgcatgcctgttgaggaatgagccggcgactcataggcagtggcctggtta 127821 Query: 607 agggaac 613 ||||||| Sbjct: 127820 agggaac 127814 Score = 815 bits (411), Expect = 0.0 Identities = 559/607 (92%), Gaps = 10/607 (1%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||| ||| |||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 95031 cctaggcactcagagacgaggaagggcgtagcaatcgacgaaatgcttcggggagctgaa 95090 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 || |||||||||||||||||||||| ||||||| |||||||| |||||| |||||||| | Sbjct: 95091 aacaagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaattc 95149 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 95150 ataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaggaaa 95209 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 ||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||| Sbjct: 95210 gcaaacgcgattcccgtagtagcggcgagcgaagtgggagtagcctaaaccgtgaaaacg 95269 Query: 253 gggttgtgggagagc------aatacaagcgttgtgctgctaggcgaagcggttgagtgc 306 |||||||||| |||| ||||||||| ||||||||||||||||||||||||||| | Sbjct: 95270 gggttgtgggggagcgatacaaatacaagctttgtgctgctaggcgaagcggttgagtcc 95329 Query: 307 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 366 ||||||||||||||| | |||||||||||||||||||||||||||| | ||||| |||| Sbjct: 95330 cgcaccctagatggcaagagtccagtagccgaaagcatcactagctcacgctctaaccca 95389 Query: 367 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95390 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 95449 Query: 427 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 486 ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| Sbjct: 95450 tactcctgggtgaccgatagcgaagcagtaccgtgagggaagggtgaaaagaacccccat 95509 Query: 487 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 546 ||| ||||||||||||| |||||||| | |||||||||||||||||||| ||| | Sbjct: 95510 aggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaattgg 95566 Query: 547 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 606 |||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 95567 atctctgaccgcatgcctgttgaggaatgagccggcgactcataggcagtggcctggtta 95626 Query: 607 agggaac 613 ||||||| Sbjct: 95627 agggaac 95633
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 813 bits (410), Expect = 0.0 Identities = 554/599 (92%), Gaps = 5/599 (0%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 116179 cctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaa 116120 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||| |||||||||||||||||| ||||||| ||||||| ||||||| |||||||| | Sbjct: 116119 aataagtatagatccggagattcccgaataggttaacctttgaaactgc-tgctgaattc 116061 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 116060 ataggcagacaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 116001 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 116000 gcaaaagcgattctcgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacg 115941 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 || ||||||| |||| | | ||| |||||| ||||||||||||| ||||||| | ||||| Sbjct: 115940 gg-ttgtgggggagctaaataagtgttgtgttgctaggcgaagcagttgagtcctgcacc 115882 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||| ||||||||||| ||||||||| |||||||||| ||||| ||||||||||| Sbjct: 115881 ctagatggtgaaagtccagtaaccgaaagcagcactagcttaggctctaacccgagtagc 115822 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 115821 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcc 115762 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 115761 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggga 115702 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||| |||||||| | |||||||||||||||||||| ||| |||||| Sbjct: 115701 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaattgaatctct 115645 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 611 |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 115644 gaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaaggga 115586 Score = 813 bits (410), Expect = 0.0 Identities = 554/599 (92%), Gaps = 5/599 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 85941 cctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaa 86000 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||| |||||||||||||||||| ||||||| ||||||| ||||||| |||||||| | Sbjct: 86001 aataagtatagatccggagattcccgaataggttaacctttgaaactgc-tgctgaattc 86059 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86060 ataggcagacaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 86119 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 86120 gcaaaagcgattctcgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacg 86179 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 || ||||||| |||| | | ||| |||||| ||||||||||||| ||||||| | ||||| Sbjct: 86180 gg-ttgtgggggagctaaataagtgttgtgttgctaggcgaagcagttgagtcctgcacc 86238 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||| ||||||||||| ||||||||| |||||||||| ||||| ||||||||||| Sbjct: 86239 ctagatggtgaaagtccagtaaccgaaagcagcactagcttaggctctaacccgagtagc 86298 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 86299 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcc 86358 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 86359 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggga 86418 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||| |||||||| | |||||||||||||||||||| ||| |||||| Sbjct: 86419 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaattgaatctct 86475 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 611 |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 86476 gaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaaggga 86534
>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence Length = 640 Score = 813 bits (410), Expect = 0.0 Identities = 529/565 (93%), Gaps = 7/565 (1%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 79 cctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 138 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||| ||||||||||||||||| ||||||||||||||| |||||| |||||||||| Sbjct: 139 aataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatcc 197 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 198 atgggcagacaagagacaacctggcgaactgaaacatcttagtagccggaggaaaagaaa 257 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 258 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 317 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 ||||||||||||||||||| |||||| |||||||||||||||||||| ||||||| ||| Sbjct: 318 gggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaagtgccgaacc 377 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 ||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 378 ctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 437 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 438 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 497 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| | Sbjct: 498 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccgtcgggga 557 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtgatctc 551 |||||||||||| |||||||| | ||||||||||||| |||||| | || | ||| Sbjct: 558 gtgaaatagaacatgaaaccg---taagctcccaagcagngggaggagcccaggg--ctc 612 Query: 552 tgaccgcgtgcctgttgaagaatga 576 ||||||||||||||||||||||||| Sbjct: 613 tgaccgcgtgcctgttgaagaatga 637
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 803 bits (405), Expect = 0.0 Identities = 555/602 (92%), Gaps = 5/602 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 2074 cctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaa 2133 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| ||||||| |||||||| |||||| |||||||| | Sbjct: 2134 aataagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaattc 2192 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2193 ataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 2252 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 2253 gcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaaccgtgaaaacg 2312 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 ||||||||||||||||| | ||| ||||| ||||||||||||| ||||||| | ||||| Sbjct: 2313 gggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgagtcctgcacc 2372 Query: 313 ctagatggctaaagtccagtagccgaaagcatcacta-gcttatgctctgacccgagtag 371 |||||||| | |||||||||||||||||||| || | || ||||||| |||||||||| Sbjct: 2373 ctagatggtgagagtccagtagccgaaagcataacaacactcatgctctaacccgagtag 2432 Query: 372 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 431 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 2433 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactc 2492 Query: 432 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 491 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 2493 ctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggg 2552 Query: 492 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 551 ||||||||||||| |||||||| | |||||||||||||||||||| ||| ||||| Sbjct: 2553 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcgaatctc 2609 Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 611 ||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 2610 tgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggttaaggga 2669 Query: 612 ac 613 || Sbjct: 2670 ac 2671
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 803 bits (405), Expect = 0.0 Identities = 555/602 (92%), Gaps = 5/602 (0%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 118119 cctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaa 118060 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| ||||||| |||||||| |||||| |||||||| | Sbjct: 118059 aataagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaattc 118001 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118000 ataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 117941 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 117940 gcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaaccgtgaaaacg 117881 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 ||||||||||||||||| | ||| ||||| ||||||||||||| ||||||| | ||||| Sbjct: 117880 gggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgagtcctgcacc 117821 Query: 313 ctagatggctaaagtccagtagccgaaagcatcacta-gcttatgctctgacccgagtag 371 |||||||| | |||||||||||||||||||| || | || ||||||| |||||||||| Sbjct: 117820 ctagatggtgagagtccagtagccgaaagcataacaacactcatgctctaacccgagtag 117761 Query: 372 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 431 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 117760 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactc 117701 Query: 432 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 491 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 117700 ctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggg 117641 Query: 492 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 551 ||||||||||||| |||||||| | |||||||||||||||||||| ||| ||||| Sbjct: 117640 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcgaatctc 117584 Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 611 ||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 117583 tgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggttaaggga 117524 Query: 612 ac 613 || Sbjct: 117523 ac 117522 Score = 803 bits (405), Expect = 0.0 Identities = 555/602 (92%), Gaps = 5/602 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 89983 cctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaa 90042 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||| ||||||| |||||||| |||||| |||||||| | Sbjct: 90043 aataagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaattc 90101 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90102 ataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 90161 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 90162 gcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaaccgtgaaaacg 90221 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 ||||||||||||||||| | ||| ||||| ||||||||||||| ||||||| | ||||| Sbjct: 90222 gggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgagtcctgcacc 90281 Query: 313 ctagatggctaaagtccagtagccgaaagcatcacta-gcttatgctctgacccgagtag 371 |||||||| | |||||||||||||||||||| || | || ||||||| |||||||||| Sbjct: 90282 ctagatggtgagagtccagtagccgaaagcataacaacactcatgctctaacccgagtag 90341 Query: 372 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 431 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 90342 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactc 90401 Query: 432 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 491 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 90402 ctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggg 90461 Query: 492 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 551 ||||||||||||| |||||||| | |||||||||||||||||||| ||| ||||| Sbjct: 90462 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcgaatctc 90518 Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 611 ||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 90519 tgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggttaaggga 90578 Query: 612 ac 613 || Sbjct: 90579 ac 90580
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 801 bits (404), Expect = 0.0 Identities = 553/601 (92%), Gaps = 4/601 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 31 cctaggcacccagagacgaagaagggcgtagcaagcgacgaaatgcttcggggagctgaa 90 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||| ||||||||||||||| ||||||| |||||||| |||||| |||||||| | Sbjct: 91 aataagcatggatccggagattcccgaataggttaaccttttgaactgc-tgctgaattc 149 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150 ataggcagacaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 209 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 210 gcaaaagcgattcccatagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacg 269 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||| |||||| | |||||||| |||||||||||| ||||| | | ||||| Sbjct: 270 gggttgtgggggagcaaagtaggcgttgtgtcgctaggcgaagcagttgaatcctgcacc 329 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 ||||||| | |||||||||||||||||||||||||| ||||||||| ||||||||||| Sbjct: 330 atagatggtgagagtccagtagccgaaagcatcactagtttatgctctaacccgagtagc 389 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 390 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcc 449 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 450 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatagggga 509 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||| |||||||| | |||||||||||||||||||| ||| |||||| Sbjct: 510 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcgaatctct 566 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||| Sbjct: 567 gaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggttaagggaa 626 Query: 613 c 613 | Sbjct: 627 c 627
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 799 bits (403), Expect = 0.0 Identities = 552/600 (92%), Gaps = 4/600 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 3920 cctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaa 3979 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 || |||||||||||||||||||||| ||||||| |||||||| |||||| |||||||| | Sbjct: 3980 aagaagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaattc 4038 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 | || | |||||||||||| ||||||||||||||||||||||||||||||||| ||||| Sbjct: 4039 acaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagaggaagagaaa 4098 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 4099 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacg 4158 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 ||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | ||||| Sbjct: 4159 gggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttctgcacc 4218 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 | |||||| | ||||||||||||||||||| |||| |||| || | ||||||||||| Sbjct: 4219 ccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaacccgagtagc 4278 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4279 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 4338 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 4339 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggga 4398 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||| ||||| || | |||| |||||||||| |||| ||| ||||||| Sbjct: 4399 gtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggagaatcggatctct 4455 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 4456 gaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaagggaa 4515
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 799 bits (403), Expect = 0.0 Identities = 556/605 (91%), Gaps = 8/605 (1%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 31 cctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaa 90 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||| || ||||||||||||||| ||||||| ||||||||||||||| |||||||| | Sbjct: 91 aataagtatggatccggagattcccgaataggttaaccttttaaactgc-tgctgaattc 149 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 || || |||||||||||||| ||||||||||||||||||||||||| |||||||||||| Sbjct: 150 ataggcgggcaagagacaacccggcgaactgaaacatcttagtagccggaggaaaagaaa 209 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 210 gcaaaagcgattctcgtagtagcggcgagcgaaatgggagcggcctaaaccgtgaaaacg 269 Query: 253 gggttgtgggagagcaatacaa----gcgttgtgctgctaggcgaagcggttgagtgccg 308 |||||||||| |||| |||||| || ||| ||||||||||||||| ||||||| | | Sbjct: 270 gggttgtgggggagctatacaaataagcattgcgctgctaggcgaagcagttgagtcctg 329 Query: 309 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 368 ||||| |||||| | ||||||||| |||||||||| || | |||||||||| ||||||| Sbjct: 330 caccccagatggtgagagtccagtaaccgaaagcataacaatcttatgctctaacccgag 389 Query: 369 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 390 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 449 Query: 429 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 488 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 450 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcg 509 Query: 489 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 548 || ||||||||||||| |||||||| | |||||||||||||||||||| ||| ||| Sbjct: 510 gggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcggat 566 Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 608 |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 567 ctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaag 626 Query: 609 ggaac 613 ||||| Sbjct: 627 ggaac 631
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 799 bits (403), Expect = 0.0 Identities = 552/600 (92%), Gaps = 4/600 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 14 cctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaa 73 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||| |||||||||||||||||| ||||||| ||||||||||||||| |||||||||| Sbjct: 74 aataagtatagatccggagattcccgaataggttaaccttttaaactgc-tgctgaatcc 132 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 || || |||||||||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 133 ataggcgggcaagagacaacctggcgaactgaaacatcttagtagccggaggaagagaaa 192 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 193 gcaaaagcgattctcgtagtagcggcgagcgaaacgggagcagcctaaaccgtgaaaacg 252 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||| |||| | | |||| |||| ||||||||||||| ||||||| | ||||| Sbjct: 253 gggttgtgggggagctaaagaagcattgtattgctaggcgaagcagttgagtcctgcacc 312 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||| | ||||||||| |||||||||| || ||||| ||||| ||||||||| | Sbjct: 313 ctagatggtgagagtccagtaaccgaaagcattacaagcttgggctctaacccgagtaac 372 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggga 492 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||| |||||||| | |||| ||||||||||||||| ||| ||||||| Sbjct: 493 gtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggagaatcggatctct 549 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 550 gaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaagggaa 609
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 799 bits (403), Expect = 0.0 Identities = 552/600 (92%), Gaps = 4/600 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 30 cctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaa 89 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 || |||||||||||||||||||||| ||||||| |||||||| |||||| |||||||| | Sbjct: 90 aagaagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaattc 148 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 | || | |||||||||||| ||||||||||||||||||||||||||||||||| ||||| Sbjct: 149 acaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagaggaagagaaa 208 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 209 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacg 268 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 ||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | ||||| Sbjct: 269 gggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttctgcacc 328 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 | |||||| | ||||||||||||||||||| |||| |||| || | ||||||||||| Sbjct: 329 ccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaacccgagtagc 388 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 448 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 449 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggga 508 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||| ||||| || | |||| |||||||||| |||| ||| ||||||| Sbjct: 509 gtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggagaatcggatctct 565 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 566 gaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaagggaa 625
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 799 bits (403), Expect = 0.0 Identities = 552/600 (92%), Gaps = 4/600 (0%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 151215 cctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaa 151156 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 || |||||||||||||||||||||| ||||||| |||||||| |||||| |||||||| | Sbjct: 151155 aagaagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaattc 151097 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 | || | |||||||||||| ||||||||||||||||||||||||||||||||| ||||| Sbjct: 151096 acaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagaggaagagaaa 151037 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 151036 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacg 150977 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 ||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | ||||| Sbjct: 150976 gggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttctgcacc 150917 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 | |||||| | ||||||||||||||||||| |||| |||| || | ||||||||||| Sbjct: 150916 ccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaacccgagtagc 150857 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150856 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 150797 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 150796 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggga 150737 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||| ||||| || | |||| |||||||||| |||| ||| ||||||| Sbjct: 150736 gtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggagaatcggatctct 150680 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 150679 gaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaagggaa 150620 Score = 799 bits (403), Expect = 0.0 Identities = 552/600 (92%), Gaps = 4/600 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 117451 cctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaa 117510 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 || |||||||||||||||||||||| ||||||| |||||||| |||||| |||||||| | Sbjct: 117511 aagaagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaattc 117569 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 | || | |||||||||||| ||||||||||||||||||||||||||||||||| ||||| Sbjct: 117570 acaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagaggaagagaaa 117629 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 117630 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacg 117689 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 ||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | ||||| Sbjct: 117690 gggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttctgcacc 117749 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 | |||||| | ||||||||||||||||||| |||| |||| || | ||||||||||| Sbjct: 117750 ccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaacccgagtagc 117809 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117810 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 117869 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 117870 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggga 117929 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||| ||||| || | |||| |||||||||| |||| ||| ||||||| Sbjct: 117930 gtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggagaatcggatctct 117986 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 117987 gaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaagggaa 118046
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 799 bits (403), Expect = 0.0 Identities = 552/600 (92%), Gaps = 4/600 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 30 cctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaa 89 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 || |||||||||||||||||||||| ||||||| |||||||| |||||| |||||||| | Sbjct: 90 aagaagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaattc 148 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 | || | |||||||||||| ||||||||||||||||||||||||||||||||| ||||| Sbjct: 149 acaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagaggaagagaaa 208 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 209 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacg 268 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 ||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | ||||| Sbjct: 269 gggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttctgcacc 328 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 | |||||| | ||||||||||||||||||| |||| |||| || | ||||||||||| Sbjct: 329 ccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaacccgagtagc 388 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 448 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 449 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggga 508 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||| ||||| || | |||| |||||||||| |||| ||| ||||||| Sbjct: 509 gtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggagaatcggatctct 565 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 566 gaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaagggaa 625
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 789 bits (398), Expect = 0.0 Identities = 560/602 (93%), Gaps = 18/602 (2%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 703 cctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 644 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||| ||||||||||||||||| ||||||||| ||| |||| ||||||||||| Sbjct: 643 aataagcgtagatccggagattcccgaataggtca--ctt---gactg-ctgctgaatcc 590 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||| || |||| ||| ||||||||||||||||||||||||||| Sbjct: 589 atg-gcaggcaagagaca--ct-gcga--tga-acatcttagtagccagaggaaaagaaa 537 Query: 193 -gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 251 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 536 ggcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 477 Query: 252 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 311 |||||||||||||||| |||||||||| |||||||||||||||||||| |||||| |||| Sbjct: 476 ggggttgtgggagagcgatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcac 417 Query: 312 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 371 |||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 416 cctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 357 Query: 372 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 356 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 297 Query: 432 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 491 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 296 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 237 Query: 492 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 551 ||||||||||||| |||||||| | |||||||||||||||||||| | | | ||| Sbjct: 236 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggctc 181 Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 121 Query: 612 ac 613 || Sbjct: 120 ac 119
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 787 bits (397), Expect = 0.0 Identities = 553/602 (91%), Gaps = 5/602 (0%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 146529 cctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaa 146470 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||| ||||| ||||||||||||||| ||||||| |||||||| |||| | |||||||| | Sbjct: 146469 aatgagcatggatccggagattcccgaataggttaaccttttgaactac-tgctgaattc 146411 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 || |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 146410 ataggcaggcgagagacaacctggcgaactgaaacatcttagtagccagaggaagagaaa 146351 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 146350 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacg 146291 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 ||||||||||||||||||| ||||||| |||||||||||||||| ||||||| | | ||| Sbjct: 146290 gggttgtgggagagcaatataagcgttttgctgctaggcgaagcagttgagtcctgtacc 146231 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagc-ttatgctctgacccgagtag 371 |||||||| | |||||||||||||||||||||||| || |||||||| |||||||||| Sbjct: 146230 ctagatggtgagagtccagtagccgaaagcatcactggctttatgctccaacccgagtag 146171 Query: 372 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 431 ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 146170 catggggcacgcagaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactc 146111 Query: 432 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 491 |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 146110 ctgggtgaccgatagcaaagtagtaccgtgagggaaaggtgaaaagaacccccgtcgggg 146051 Query: 492 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 551 ||||||||||||| |||||||| | ||||||||||||||||||| ||| |||| | Sbjct: 146050 agtgaaatagaacatgaaaccg---taggctcccaagcagtgggaggagaatcggatccc 145994 Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 611 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 145993 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaaggga 145934 Query: 612 ac 613 || Sbjct: 145933 ac 145932 Score = 787 bits (397), Expect = 0.0 Identities = 553/602 (91%), Gaps = 5/602 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 111933 cctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaa 111992 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||| ||||| ||||||||||||||| ||||||| |||||||| |||| | |||||||| | Sbjct: 111993 aatgagcatggatccggagattcccgaataggttaaccttttgaactac-tgctgaattc 112051 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 || |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 112052 ataggcaggcgagagacaacctggcgaactgaaacatcttagtagccagaggaagagaaa 112111 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 112112 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacg 112171 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 ||||||||||||||||||| ||||||| |||||||||||||||| ||||||| | | ||| Sbjct: 112172 gggttgtgggagagcaatataagcgttttgctgctaggcgaagcagttgagtcctgtacc 112231 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagc-ttatgctctgacccgagtag 371 |||||||| | |||||||||||||||||||||||| || |||||||| |||||||||| Sbjct: 112232 ctagatggtgagagtccagtagccgaaagcatcactggctttatgctccaacccgagtag 112291 Query: 372 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 431 ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 112292 catggggcacgcagaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactc 112351 Query: 432 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 491 |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 112352 ctgggtgaccgatagcaaagtagtaccgtgagggaaaggtgaaaagaacccccgtcgggg 112411 Query: 492 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 551 ||||||||||||| |||||||| | ||||||||||||||||||| ||| |||| | Sbjct: 112412 agtgaaatagaacatgaaaccg---taggctcccaagcagtgggaggagaatcggatccc 112468 Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 611 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 112469 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaaggga 112528 Query: 612 ac 613 || Sbjct: 112529 ac 112530
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 763 bits (385), Expect = 0.0 Identities = 488/518 (94%), Gaps = 7/518 (1%) Strand = Plus / Minus Query: 87 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 146 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 512 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 454 Query: 147 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 394 Query: 207 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 334 Query: 267 caatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaa 325 |||||||||||| ||||||||||||||||| | || ||| |||||||||||||| ||| Sbjct: 333 caatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaa 274 Query: 326 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 273 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 214 Query: 386 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 445 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 213 aatcccgtgtgaatcagcaaggaccgccttgcaaggctaaatactcctgggtgaccgata 154 Query: 446 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 505 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 153 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 94 Query: 506 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 565 |||||||| | |||||||||||||||||||| | || | ||||||||||||||||| Sbjct: 93 tgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctg 39 Query: 566 ttgaagaatgagccggcgactcataggcagtggcttgg 603 |||||||||||||||||||||||||||||||||||||| Sbjct: 38 ttgaagaatgagccggcgactcataggcagtggcttgg 1
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 759 bits (383), Expect = 0.0 Identities = 497/532 (93%), Gaps = 5/532 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 38 cctaggcacccagagacgaggaagggcgtattaatcgacgaaatgcttcggggagttgaa 97 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||| |||||||||||||||| |||||| |||||||| |||| | |||||||||| Sbjct: 98 aataagccgagatccggagattcccgaatagggcaacctttcgaacttc-tgctgaatcc 156 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 157 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 216 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 217 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 276 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||| ||||||||||||||| | || |||||| | ||| Sbjct: 277 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtggagtgcggtacc 336 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 337 ctagatggtgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 396 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 397 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 456 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 ||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||| | Sbjct: 457 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa-ccccatcgggga 515 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 544 |||||||| ||| |||||||| | ||||| |||||||||||||| ||||| Sbjct: 516 gtgaaataaaacatgaaaccg---taagctctcaagcagtgggaggagaaag 564
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 755 bits (381), Expect = 0.0 Identities = 462/486 (95%), Gaps = 6/486 (1%) Strand = Plus / Plus Query: 122 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 181 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 76 Query: 182 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 136 Query: 242 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt- 300 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 137 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagccc 196 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 197 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctct 256 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 316 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 317 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 376 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 377 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 433 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 || | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 434 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 491 Query: 601 tggtta 606 |||||| Sbjct: 492 tggtta 497
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 749 bits (378), Expect = 0.0 Identities = 451/472 (95%), Gaps = 4/472 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 27 cctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 86 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||| ||||||||||||||||| ||||||||||||||| ||||||| |||||||||| Sbjct: 87 aataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatcc 145 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 146 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 205 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 206 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 265 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||| |||||||||||||||||||| || | | ||||| Sbjct: 266 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggaatactgcacc 325 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 ||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 326 ctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 385 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 386 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactac 445 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 484 |||||||||||| |||||||||||||||||||| |||| ||||||||||| Sbjct: 446 --ggtgaccgatagtgaagtagtaccgtgagggaagggtg-aaagaaccccc 494
>gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial sequence; chloroplast Length = 467 Score = 743 bits (375), Expect = 0.0 Identities = 441/462 (95%), Gaps = 1/462 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 7 cctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 66 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||| |||||| Sbjct: 67 aataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgccgaatcc 125 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 126 atgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaa 185 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 186 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 245 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||| ||||||||||||||||||| || ||||||| Sbjct: 246 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggccgaacaccgcacc 305 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 306 ctagatggtgggagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 365 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 366 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 425 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 474 ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 426 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaa 467
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 712 bits (359), Expect = 0.0 Identities = 398/412 (96%), Gaps = 13/412 (3%) Strand = Plus / Minus Query: 206 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75478 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 75419 Query: 266 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75418 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 75359 Query: 326 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 385 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 75358 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 75299 Query: 386 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 440 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 75298 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 75239 Query: 441 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75238 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 75179 Query: 501 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 560 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 75178 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 75127 Query: 561 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75126 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 75075 Score = 379 bits (191), Expect = e-102 Identities = 196/198 (98%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75682 cctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 75623 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 75622 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 75563 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75562 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 75503 Query: 193 gcaaaagcgattcccgta 210 |||||||||||||||||| Sbjct: 75502 gcaaaagcgattcccgta 75485 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 137 gcaggcaagagacaacctggcgaactgaaacatcttagta 176 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 430381 gcaggcaagagacaacctagcgaactgaaacatcttagta 430342 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 437 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 483 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 400814 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 400860
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 712 bits (359), Expect = 0.0 Identities = 398/412 (96%), Gaps = 13/412 (3%) Strand = Plus / Plus Query: 206 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382060 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 382119 Query: 266 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382120 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 382179 Query: 326 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 385 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 382180 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 382239 Query: 386 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 440 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 382240 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 382299 Query: 441 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382300 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 382359 Query: 501 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 560 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 382360 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 382411 Query: 561 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382412 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 382463 Score = 379 bits (191), Expect = e-102 Identities = 196/198 (98%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381856 cctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 381915 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 381916 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 381975 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381976 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 382035 Query: 193 gcaaaagcgattcccgta 210 |||||||||||||||||| Sbjct: 382036 gcaaaagcgattcccgta 382053 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 137 gcaggcaagagacaacctggcgaactgaaacatcttagta 176 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 254042 gcaggcaagagacaacctagcgaactgaaacatcttagta 254081 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 137 gcaggcaagagacaacctggcgaactgaaacatcttagta 176 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 125350 gcaggcaagagacaacctagcgaactgaaacatcttagta 125389 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 437 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 483 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 283605 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 283559 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 437 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 483 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 154913 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 154867
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 712 bits (359), Expect = 0.0 Identities = 398/412 (96%), Gaps = 13/412 (3%) Strand = Plus / Minus Query: 206 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113569 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 113510 Query: 266 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113509 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 113450 Query: 326 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 385 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 113449 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 113390 Query: 386 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 440 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 113389 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 113330 Query: 441 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113329 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 113270 Query: 501 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 560 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 113269 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 113218 Query: 561 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113217 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 113166 Score = 379 bits (191), Expect = e-102 Identities = 196/198 (98%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113773 cctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 113714 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 113713 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 113654 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113653 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 113594 Query: 193 gcaaaagcgattcccgta 210 |||||||||||||||||| Sbjct: 113593 gcaaaagcgattcccgta 113576 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 137 gcaggcaagagacaacctggcgaactgaaacatcttagta 176 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 323068 gcaggcaagagacaacctagcgaactgaaacatcttagta 323029 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 437 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 483 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 293448 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 293494
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 712 bits (359), Expect = 0.0 Identities = 398/412 (96%), Gaps = 13/412 (3%) Strand = Plus / Minus Query: 206 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368251 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 368192 Query: 266 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368191 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 368132 Query: 326 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 385 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 368131 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 368072 Query: 386 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 440 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 368071 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 368012 Query: 441 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368011 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 367952 Query: 501 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 560 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 367951 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 367900 Query: 561 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367899 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 367848 Score = 712 bits (359), Expect = 0.0 Identities = 398/412 (96%), Gaps = 13/412 (3%) Strand = Plus / Minus Query: 206 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184856 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 184797 Query: 266 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184796 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 184737 Query: 326 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 385 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 184736 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 184677 Query: 386 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 440 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 184676 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 184617 Query: 441 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184616 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 184557 Query: 501 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 560 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 184556 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 184505 Query: 561 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 612 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184504 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 184453 Score = 379 bits (191), Expect = e-102 Identities = 196/198 (98%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368455 cctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 368396 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 368395 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 368336 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368335 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 368276 Query: 193 gcaaaagcgattcccgta 210 |||||||||||||||||| Sbjct: 368275 gcaaaagcgattcccgta 368258 Score = 379 bits (191), Expect = e-102 Identities = 196/198 (98%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185060 cctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 185001 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 185000 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 184941 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184940 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 184881 Query: 193 gcaaaagcgattcccgta 210 |||||||||||||||||| Sbjct: 184880 gcaaaagcgattcccgta 184863 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 137 gcaggcaagagacaacctggcgaactgaaacatcttagta 176 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 295897 gcaggcaagagacaacctagcgaactgaaacatcttagta 295858 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 437 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 483 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 266283 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 266329
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 710 bits (358), Expect = 0.0 Identities = 545/602 (90%), Gaps = 8/602 (1%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| |||||||||||| |||| || ||||||||||||||||||||||||| Sbjct: 30 cctaggcacccagagacgaggaagggtgtagtaatcgacgaaatgcttcggggagttgaa 89 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||| |||||||| ||| || ||||||| | ||||| |||| ||||| Sbjct: 90 aataagcatagatccgtagattcccgaatggggtaacctttcacactgc-tgctcaatcc 148 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 149 atgggcaggaaagagacaacctggcgaactgaaacatcttagtagccagaggaaaataaa 208 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 ||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 209 gcaaaagcgattcccatagtagcggcgagcgaaatgggatcagcctaaaccgcgaaaacg 268 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcac 311 ||||||||||||||||||| |||||| ||||||||||||||||| | || | || |||| Sbjct: 269 gggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcagcttaaatgatgcac 328 Query: 312 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 371 |||||||||| |||||||||||| | |||||||||||| || |||||||||||||||| Sbjct: 329 cctagatggcgaaagtccagtagtcaaaagcatcactacgttgcgctctgacccgagtag 388 Query: 372 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 431 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 catgggacacgtgtaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 448 Query: 432 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 491 |||||| ||| |||| ||||||||||||||||||| ||||||||||| ||||| |||| Sbjct: 449 ctgggtaaccaatagtaaagtagtaccgtgagggaagggtgaaaagaa-ccccattgggg 507 Query: 492 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 551 ||||||||||||| |||||||| | |||| ||||||||||||||| | || | ||| Sbjct: 508 agtgaaatagaacatgaaaccg---taagctaccaagcagtgggaggagccaggg--ctc 562 Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 611 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 563 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaaggga 622 Query: 612 ac 613 || Sbjct: 623 ac 624
>dbj|AK107856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B02, full insert sequence Length = 998 Score = 710 bits (358), Expect = 0.0 Identities = 364/366 (99%) Strand = Plus / Plus Query: 80 atagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagca 139 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 atagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagca 60 Query: 140 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 120 Query: 200 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 180 Query: 260 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 240 Query: 320 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 379 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 241 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 300 Query: 380 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 360 Query: 440 ccgata 445 |||||| Sbjct: 361 ccgata 366
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 694 bits (350), Expect = 0.0 Identities = 370/377 (98%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||| |||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123440 cctaggtacccagagatgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 123381 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 123380 attaagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 123321 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123320 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 123261 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123260 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 123201 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123200 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 123141 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 123140 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgccccgagtagc 123081 Query: 373 atggggcacgtggaatc 389 ||||||||||||||||| Sbjct: 123080 atggggcacgtggaatc 123064 Score = 442 bits (223), Expect = e-121 Identities = 235/238 (98%), Gaps = 2/238 (0%) Strand = Plus / Minus Query: 381 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122820 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 122761 Query: 441 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122760 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 122701 Query: 501 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 560 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122700 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 122641 Query: 561 gcctgttgaagaatgagccggcgactcataggca--gtggcttggttaagggaacgga 616 ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| Sbjct: 122640 gcctgttgaagaatgagccggtgactcataggcagtgtggcttggttaagggaacgga 122583
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 694 bits (350), Expect = 0.0 Identities = 370/377 (98%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||| |||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825981 cctaggtacccagagatgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 12825922 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 12825921 attaagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 12825862 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825861 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 12825802 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825801 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 12825742 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825741 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 12825682 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 12825681 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgccccgagtagc 12825622 Query: 373 atggggcacgtggaatc 389 ||||||||||||||||| Sbjct: 12825621 atggggcacgtggaatc 12825605 Score = 442 bits (223), Expect = e-121 Identities = 235/238 (98%), Gaps = 2/238 (0%) Strand = Plus / Minus Query: 381 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825361 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 12825302 Query: 441 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825301 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 12825242 Query: 501 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 560 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825241 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 12825182 Query: 561 gcctgttgaagaatgagccggcgactcataggca--gtggcttggttaagggaacgga 616 ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| Sbjct: 12825181 gcctgttgaagaatgagccggtgactcataggcagtgtggcttggttaagggaacgga 12825124 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 326 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 385 ||||||||||||||||||||||||||||||||||||| || |||||||||| ||| |||| Sbjct: 16021783 gtccagtagccgaaagcatcactagcttatgctctgaaccaagtagcatggcgcatgtgg 16021842
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 581 bits (293), Expect = e-162 Identities = 296/297 (99%) Strand = Plus / Plus Query: 320 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 379 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 60 Query: 380 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 120 Query: 440 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 180 Query: 500 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 240 Query: 560 tgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 616 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 297
>gb|DQ160037.1| Taraxacum officinale To27-3 mRNA, partial sequence Length = 336 Score = 563 bits (284), Expect = e-157 Identities = 321/332 (96%), Gaps = 1/332 (0%) Strand = Plus / Minus Query: 107 aaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaa 166 ||||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 335 aacctttcaaactgc-tgctgaatccatgggcaggcaggagacaacctggcgaactgaaa 277 Query: 167 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 217 Query: 227 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 286 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 216 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 157 Query: 287 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 346 |||||||||| || || ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 156 taggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 97 Query: 347 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 406 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 37 Query: 407 gaccaccttgcaaggctaaatactcctgggtg 438 |||||||||||||||||||||||||||||||| Sbjct: 36 gaccaccttgcaaggctaaatactcctgggtg 5
>gb|M37149.1|SOYCPRTG Soybean chloroplast 16S rRNA (3' end), 18S rRNA (5' end), Ile-tRNA, and Ala-tRNA genes Length = 3022 Score = 543 bits (274), Expect = e-151 Identities = 369/396 (93%), Gaps = 5/396 (1%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 2629 cctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 2688 Query: 73 aataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcctgctgaatc 131 ||||||| ||||||||| ||||||| | |||||||||||||| |||||| ||||||||| Sbjct: 2689 aataagcgtagatccggggattcccgatataggtcaacctttcgaactgc-tgctgaatc 2747 Query: 132 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 191 || | |||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 2748 cacgggcaggcaagagacaacttggtgaactgaaacatcttagtagccagaggaaaagaa 2807 Query: 192 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2808 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 2867 Query: 252 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag--tgccgc 309 |||||||||||||||| ||||||| || ||||||||||||||||| | ||| ||| || Sbjct: 2868 ggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagagaatgctgc 2927 Query: 310 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 369 |||||||||||| | |||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 2928 accctagatggcgagagtccagtagccgaaagcatcact-gcttacgctctgacccgagt 2986 Query: 370 agcatggggcacgtggaatcccgtgtgaatcagcaa 405 ||||| |||||||||||||||||||||||||||||| Sbjct: 2987 agcatagggcacgtggaatcccgtgtgaatcagcaa 3022
>gb|M21402.1|SOYRDNASPA Soybean chloroplast 16S/23S ribosomal intergenic spacer DNA Length = 1277 Score = 543 bits (274), Expect = e-151 Identities = 369/396 (93%), Gaps = 5/396 (1%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 884 cctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 943 Query: 73 aataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcctgctgaatc 131 ||||||| ||||||||| ||||||| | |||||||||||||| |||||| ||||||||| Sbjct: 944 aataagcgtagatccggggattcccgatataggtcaacctttcgaactgc-tgctgaatc 1002 Query: 132 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 191 || | |||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 1003 cacgggcaggcaagagacaacttggtgaactgaaacatcttagtagccagaggaaaagaa 1062 Query: 192 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1063 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 1122 Query: 252 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag--tgccgc 309 |||||||||||||||| ||||||| || ||||||||||||||||| | ||| ||| || Sbjct: 1123 ggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagagaatgctgc 1182 Query: 310 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 369 |||||||||||| | |||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 1183 accctagatggcgagagtccagtagccgaaagcatcact-gcttacgctctgacccgagt 1241 Query: 370 agcatggggcacgtggaatcccgtgtgaatcagcaa 405 ||||| |||||||||||||||||||||||||||||| Sbjct: 1242 agcatagggcacgtggaatcccgtgtgaatcagcaa 1277
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 541 bits (273), Expect = e-151 Identities = 517/598 (86%), Gaps = 3/598 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||| ||||||||| |||| |||||||||||||||||||| ||| Sbjct: 143949 cctaggcacccagagacgaagaagggcgtggcaaacgacgaaatgcttcggggagccgaa 144008 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||| | |||||||||||||||||| ||||||| |||||| |||||||||||||||| | Sbjct: 144009 aataggtatagatccggagattcccgaataggttaaccttccaaactgcctgctgaattc 144068 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 | ||||| |||||||||||| ||||||||||||||||||||||||| ||||| | ||| Sbjct: 144069 agaagcagacaagagacaacccggcgaactgaaacatcttagtagccggaggaggaaaaa 144128 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 ||||||||||||||| ||||| ||||||| |||| |||| ||||||||||||||| ||| Sbjct: 144129 gcaaaagcgattcccctagtaacggcgagtgaaacgggaagagcctaaaccgtgaagacg 144188 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||| || || | || | ||||||||||| ||||||||| ||||| Sbjct: 144189 gggttgtgggagagtgatgagggcttcgttttactaggcgaagcagttgagtgctgcacc 144248 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 | |||||| | ||||||||||||| ||| | |||||| | |||| |||| |||||| Sbjct: 144249 ccagatggtgatagtccagtagccggaagtacagctagctcacgctccaacccaagtagc 144308 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||| |||||||||||||||||| |||||||||||| ||||||||||| ||| Sbjct: 144309 atggggcacgcaaaatcccgtgtgaatcagcgaggaccaccttgtaaggctaaatattcc 144368 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 || |||||||||||||||| |||||||||||||||||||||||||||||||| ||| | Sbjct: 144369 tgagtgaccgatagcgaagcagtaccgtgagggaaaggtgaaaagaacccccgtcgggga 144428 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||| |||||||| ||||||||||||||||||||| ||| | ||||||| Sbjct: 144429 gtgaaatagaacatgaaaccg---cgagctcccaagcagtgggaggagaatgagatctct 144485 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 610 ||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 144486 aaccgcgtgcctgttgaagaatgagccggcgacttgtaggcggtggcccggttaaggg 144543 Score = 541 bits (273), Expect = e-151 Identities = 517/598 (86%), Gaps = 3/598 (0%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||| ||||||||| |||| |||||||||||||||||||| ||| Sbjct: 88902 cctaggcacccagagacgaagaagggcgtggcaaacgacgaaatgcttcggggagccgaa 88843 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||| | |||||||||||||||||| ||||||| |||||| |||||||||||||||| | Sbjct: 88842 aataggtatagatccggagattcccgaataggttaaccttccaaactgcctgctgaattc 88783 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 | ||||| |||||||||||| ||||||||||||||||||||||||| ||||| | ||| Sbjct: 88782 agaagcagacaagagacaacccggcgaactgaaacatcttagtagccggaggaggaaaaa 88723 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 ||||||||||||||| ||||| ||||||| |||| |||| ||||||||||||||| ||| Sbjct: 88722 gcaaaagcgattcccctagtaacggcgagtgaaacgggaagagcctaaaccgtgaagacg 88663 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 312 |||||||||||||| || || | || | ||||||||||| ||||||||| ||||| Sbjct: 88662 gggttgtgggagagtgatgagggcttcgttttactaggcgaagcagttgagtgctgcacc 88603 Query: 313 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 372 | |||||| | ||||||||||||| ||| | |||||| | |||| |||| |||||| Sbjct: 88602 ccagatggtgatagtccagtagccggaagtacagctagctcacgctccaacccaagtagc 88543 Query: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 |||||||||| |||||||||||||||||| |||||||||||| ||||||||||| ||| Sbjct: 88542 atggggcacgcaaaatcccgtgtgaatcagcgaggaccaccttgtaaggctaaatattcc 88483 Query: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 492 || |||||||||||||||| |||||||||||||||||||||||||||||||| ||| | Sbjct: 88482 tgagtgaccgatagcgaagcagtaccgtgagggaaaggtgaaaagaacccccgtcgggga 88423 Query: 493 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 552 |||||||||||| |||||||| ||||||||||||||||||||| ||| | ||||||| Sbjct: 88422 gtgaaatagaacatgaaaccg---cgagctcccaagcagtgggaggagaatgagatctct 88366 Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 610 ||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 88365 aaccgcgtgcctgttgaagaatgagccggcgacttgtaggcggtggcccggttaaggg 88308
>dbj|AK104484.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H11, full insert sequence Length = 1091 Score = 505 bits (255), Expect = e-140 Identities = 263/266 (98%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28 cctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 87 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 88 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 147 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 207 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 267 Query: 253 gggttgtgggagagcaatacaagcgt 278 |||||||||||||||||||||||||| Sbjct: 268 gggttgtgggagagcaatacaagcgt 293
>dbj|AK060870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H08, full insert sequence Length = 1091 Score = 505 bits (255), Expect = e-140 Identities = 263/266 (98%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28 cctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 87 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 88 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 147 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 207 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 267 Query: 253 gggttgtgggagagcaatacaagcgt 278 |||||||||||||||||||||||||| Sbjct: 268 gggttgtgggagagcaatacaagcgt 293
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 482 bits (243), Expect = e-133 Identities = 246/247 (99%) Strand = Plus / Plus Query: 370 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 60 Query: 430 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 489 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 120 Query: 490 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 549 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gtagtgaaataggacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 180 Query: 550 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 609 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 240 Query: 610 gaacgga 616 ||||||| Sbjct: 241 gaacgga 247
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 480 bits (242), Expect = e-132 Identities = 327/353 (92%), Gaps = 2/353 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| || |||||||||||||| || ||||||||||||||||||||||||| Sbjct: 177061 cctaggcacccagagaggaggaagggcgtagtaatcgacgaaatgcttcggggagttgaa 177120 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||| ||||||||||||||||||||| |||||| |||||||| |||||| |||||||||| Sbjct: 177121 aatcagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatcc 177179 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||||||||||| |||| |||||||||||| ||||||||||||||||||||||||| Sbjct: 177180 atgggcaggcaagagagaaccaggcgaactgaaagatcttagtagccagaggaaaagaaa 177239 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| Sbjct: 177240 gcaaaagcgattcccgtagtagcggcgggcgaaatgggagctgcctaaaccgtgaaaacg 177299 Query: 253 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcac 311 |||||||||||||||||||||||||| |||| |||||||||||| | || ||| |||| Sbjct: 177300 gggttgtgggagagcaatacaagcgtcgtgcagctaggcgaagcagcccgaatgctgcac 177359 Query: 312 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 364 |||||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 177360 cctagatggcgaaagtccagtagccgaaagcatcactagcttaggctctgacc 177412 Score = 129 bits (65), Expect = 1e-26 Identities = 65/65 (100%) Strand = Plus / Plus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 608 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177405 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 177464 Query: 609 ggaac 613 ||||| Sbjct: 177465 ggaac 177469 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 437 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 418398 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 418443 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 437 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 67648 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 67693 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 156 gcgaactgaaacatcttagtagc 178 ||||||||||||||||||||||| Sbjct: 417776 gcgaactgaaacatcttagtagc 417798 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 156 gcgaactgaaacatcttagtagc 178 ||||||||||||||||||||||| Sbjct: 67026 gcgaactgaaacatcttagtagc 67048
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 472 bits (238), Expect = e-130 Identities = 519/609 (85%), Gaps = 18/609 (2%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||||||||| ||||||||||||||||||| ||||| ||||||||||| || | Sbjct: 139239 cctaggcacccaaagacgaggaagggcgtagcaggcgac--aatgcttcgggaagccaga 139182 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||| ||| ||| ||| |||| || ||||||| |||||| Sbjct: 139181 gataagcatagatccggagatccccgaatgggttaaccccttgaactgcc----gaatcc 139126 Query: 133 atgagcagg----caagagacaacctggcgaactgaaacatcttagtagccagaggaaaa 188 ||| | || |||||||| ||| ||||||| |||||||| | ||||| | |||| | Sbjct: 139125 atgggatgggcggcaagagacgacccggcgaaccgaaacatccaaatagccgggggaaga 139066 Query: 189 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 248 ||| |||||||||||||||| |||||||||||||||| ||||| ||||||||||||| Sbjct: 139065 gaaggcaaaagcgattcccgcagtagcggcgagcgaagagggagtagcctaaaccgtggg 139006 Query: 249 aacggggttgtgggagagcaatac----aagcgttgtgctgctaggcgaagcggttgagt 304 ||||||||||||||||||| ||| ||| ||||||||| |||| |||||||| |||| Sbjct: 139005 aacggggttgtgggagagcgataagtataag-gttgtgctgttaggtgaagcggtcgagt 138947 Query: 305 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 364 ||||| || ||| || || ||||| ||||||| ||||| ||| ||||| ||||||||| Sbjct: 138946 cccgcatcccagacggttagagtccggtagccggaagcagcacaggcttacgctctgacc 138887 Query: 365 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 424 |||||||||||||||||||||||||||||| |||||||| |||||||||| | ||||||| Sbjct: 138886 cgagtagcatggggcacgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggcta 138827 Query: 425 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 484 |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 138826 aatacttctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccccc 138767 Query: 485 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 544 | ||| ||||||||||||| |||||||| | ||||||| |||||||||||| ||| Sbjct: 138766 atcggggagtgaaatagaacatgaaaccg---taagctcccgagcagtgggaggagaatt 138710 Query: 545 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||||||||||||| |||||| | ||| |||| Sbjct: 138709 ggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcggcggcctggt 138650 Query: 605 taagggaac 613 ||||||||| Sbjct: 138649 taagggaac 138641 Score = 472 bits (238), Expect = e-130 Identities = 519/609 (85%), Gaps = 18/609 (2%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||||||||| ||||||||||||||||||| ||||| ||||||||||| || | Sbjct: 82638 cctaggcacccaaagacgaggaagggcgtagcaggcgac--aatgcttcgggaagccaga 82695 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||| ||| ||| ||| |||| || ||||||| |||||| Sbjct: 82696 gataagcatagatccggagatccccgaatgggttaaccccttgaactgcc----gaatcc 82751 Query: 133 atgagcagg----caagagacaacctggcgaactgaaacatcttagtagccagaggaaaa 188 ||| | || |||||||| ||| ||||||| |||||||| | ||||| | |||| | Sbjct: 82752 atgggatgggcggcaagagacgacccggcgaaccgaaacatccaaatagccgggggaaga 82811 Query: 189 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 248 ||| |||||||||||||||| |||||||||||||||| ||||| ||||||||||||| Sbjct: 82812 gaaggcaaaagcgattcccgcagtagcggcgagcgaagagggagtagcctaaaccgtggg 82871 Query: 249 aacggggttgtgggagagcaatac----aagcgttgtgctgctaggcgaagcggttgagt 304 ||||||||||||||||||| ||| ||| ||||||||| |||| |||||||| |||| Sbjct: 82872 aacggggttgtgggagagcgataagtataag-gttgtgctgttaggtgaagcggtcgagt 82930 Query: 305 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 364 ||||| || ||| || || ||||| ||||||| ||||| ||| ||||| ||||||||| Sbjct: 82931 cccgcatcccagacggttagagtccggtagccggaagcagcacaggcttacgctctgacc 82990 Query: 365 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 424 |||||||||||||||||||||||||||||| |||||||| |||||||||| | ||||||| Sbjct: 82991 cgagtagcatggggcacgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggcta 83050 Query: 425 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 484 |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 83051 aatacttctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccccc 83110 Query: 485 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 544 | ||| ||||||||||||| |||||||| | ||||||| |||||||||||| ||| Sbjct: 83111 atcggggagtgaaatagaacatgaaaccg---taagctcccgagcagtgggaggagaatt 83167 Query: 545 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||||||||||||| |||||| | ||| |||| Sbjct: 83168 ggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcggcggcctggt 83227 Query: 605 taagggaac 613 ||||||||| Sbjct: 83228 taagggaac 83236
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 458 bits (231), Expect = e-125 Identities = 231/231 (100%) Strand = Plus / Plus Query: 386 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 60 Query: 446 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 120 Query: 506 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 180 Query: 566 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 616 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 231
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 448 bits (226), Expect = e-122 Identities = 330/364 (90%), Gaps = 3/364 (0%) Strand = Plus / Minus Query: 247 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 306 ||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||||| | Sbjct: 6284 aaaacggggttgtgggagagcaatataagcgttgtgtcgctaggtgaagcagttgagtcc 6225 Query: 307 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 366 ||||||||||||| | |||||||||| ||||||| || | ||||| ||||| ||||| Sbjct: 6224 tgcaccctagatggtgagagtccagtagtcgaaagcggcattggcttacgctctaacccg 6165 Query: 367 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6164 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 6105 Query: 427 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 486 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 6104 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccctat 6045 Query: 487 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 546 ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| | Sbjct: 6044 cggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaatgga 5988 Query: 547 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 606 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 5987 atctctgaccgcgtgccttttgaagaatgagccggcgacttataggcagtggcttggtta 5928 Query: 607 aggg 610 |||| Sbjct: 5927 aggg 5924 Score = 262 bits (132), Expect = 1e-66 Identities = 185/200 (92%), Gaps = 2/200 (1%) Strand = Plus / Minus Query: 46 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 105 ||||||||||||||||||||||||| || | |||||||||||||||||||| ||||||| Sbjct: 6512 agcgacgaaatgcttcggggagttgtaattc-gcatagatccggagattcccgaataggt 6454 Query: 106 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 165 |||||||| |||||| ||||||||||||| ||||| ||| | |||||||| |||||||| Sbjct: 6453 taaccttttgaactgc-tgctgaatccatgggcaggtaaggggcaacctggtgaactgaa 6395 Query: 166 acatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaa 225 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 6394 acatcttagtaaccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaa 6335 Query: 226 atgggagcagcctaaaccgt 245 |||||||||||||||||||| Sbjct: 6334 atgggagcagcctaaaccgt 6315
>gb|DQ160136.1| Taraxacum officinale To110-2 mRNA, partial sequence Length = 282 Score = 416 bits (210), Expect = e-113 Identities = 264/280 (94%), Gaps = 4/280 (1%) Strand = Plus / Plus Query: 323 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 382 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 62 Query: 383 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 122 Query: 443 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 502 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 123 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 182 Query: 503 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 562 || |||||||| | |||||||||||||||||||||| | | |||||||||||||| Sbjct: 183 acatgaaaccg---taagctcccaagcagtgggaggggcccg-gggctctgaccgcgtgc 238 Query: 563 ctgttgaagaatgagccggcgactcataggcagtggcttg 602 |||||||||||||||||||||||||||||||||||||||| Sbjct: 239 ctgttgaagaatgagccggcgactcataggcagtggcttg 278
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 410 bits (207), Expect = e-111 Identities = 292/319 (91%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 102 aggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaac 161 |||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct: 3695 aggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcaaac 3637 Query: 162 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 221 ||||| |||||||||||||||||||||||||||||||| ||||||||||||| || |||| Sbjct: 3636 tgaaatatcttagtagccagaggaaaagaaagcaaaagtgattcccgtagtaacgacgag 3577 Query: 222 cgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgt 281 ||||||||||||||||||||||| |||| | ||||||||||||||||| ||| ||| || Sbjct: 3576 tgaaatgggagcagcctaaaccgtaaaaatgaggttgtgggagagcaatgcaaacgtagt 3517 Query: 282 gctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaag 341 || ||||||| ||||||| ||||| |||||||||||||| | ||| |||||||||||| Sbjct: 3516 gccgctaggcaaagcggtggagtgttgcaccctagatggcgagagtttagtagccgaaag 3457 Query: 342 catcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatca 401 |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 3456 catccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatta 3397 Query: 402 gcaaggaccaccttgcaag 420 ||||||||||||||||||| Sbjct: 3396 gcaaggaccaccttgcaag 3378 Score = 105 bits (53), Expect = 2e-19 Identities = 62/65 (95%) Strand = Plus / Minus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 608 |||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3249 ctctgaccgcgtacctattgaagaatgagccgacgactcataggcagtggcttggttaag 3190 Query: 609 ggaac 613 ||||| Sbjct: 3189 ggaac 3185 Score = 95.6 bits (48), Expect = 2e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 429 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 488 ||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 3365 ctcctggctgacctatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 3306 Query: 489 ggtagtgaaatagaacgtgaaacc 512 || |||||||||||| ||||||| Sbjct: 3305 gggagtgaaatagaagatgaaacc 3282 Score = 79.8 bits (40), Expect = 1e-11 Identities = 69/79 (87%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||| |||||||| ||||||||||||| ||| |||||||||||||||| | |||||| | Sbjct: 3772 cctatgcacccagagacgaggaagggcatagttagcgacgaaatgcttcagagagttgca 3713 Query: 73 aataagcatagatccggag 91 ||||||| |||||| |||| Sbjct: 3712 aataagcgtagatcaggag 3694
>gb|DQ460110.1| Nicotiana tabacum cDNA-AFLP fragment H-N_BC3M12-1 sequence Length = 249 Score = 404 bits (204), Expect = e-109 Identities = 238/248 (95%), Gaps = 1/248 (0%) Strand = Plus / Plus Query: 199 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 258 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1 gcgattcccgtagtagcggcgagcgaaatgggagcagcctagaccgtgaaaacggggttg 60 Query: 259 tgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctaga 317 |||||||||||||||||||| ||||||||||||||||| | || ||| |||||||||| Sbjct: 61 tgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctaga 120 Query: 318 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 377 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 Query: 378 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 437 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgctaggctaaatactcctgggt 240 Query: 438 gaccgata 445 |||||||| Sbjct: 241 gaccgata 248
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 400 bits (202), Expect = e-108 Identities = 238/249 (95%), Gaps = 1/249 (0%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 79740 cctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 79681 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||| ||||||| ||||||||||||||| |||||| |||||||| | Sbjct: 79680 aataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-tgctgaattc 79622 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79621 acgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 79562 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 79561 gcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacg 79502 Query: 253 gggttgtgg 261 ||||||||| Sbjct: 79501 gggttgtgg 79493
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 391 bits (197), Expect = e-105 Identities = 202/204 (99%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75796 cctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 75855 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 75856 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgcggaatcc 75915 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75916 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 75975 Query: 193 gcaaaagcgattcccgtagtagcg 216 |||||||||||||||||||||||| Sbjct: 75976 gcaaaagcgattcccgtagtagcg 75999 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 437 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 483 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 374093 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 374047 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 437 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 483 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 262355 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 262309 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 ggcgaactgaaacatcttag 174 |||||||||||||||||||| Sbjct: 320856 ggcgaactgaaacatcttag 320837
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 363 bits (183), Expect = 5e-97 Identities = 503/600 (83%), Gaps = 15/600 (2%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| || || ||||||| || || || ||||||||| |||||||| || Sbjct: 29 cctaggcacccagggatgaagaagggcataataattgatgaaatgctttggggagttaaa 88 Query: 73 aa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 131 || ||| ||||||||||||||||||| ||||||| ||||||| |||||| |||| | || Sbjct: 89 aaataaacatagatccggagattcccgaataggtaaaccttt--aactgc-tgcttattc 145 Query: 132 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 191 |||| |||| ||||||| ||||||| ||||||||||||||||||||||||||||||| || Sbjct: 146 catg-gcagacaagaga-aacctggtgaactgaaacatcttagtagccagaggaaaataa 203 Query: 192 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 251 |||||||| |||||| |||||| ||| | |||| |||| ||||||||| || |||| Sbjct: 204 agcaaaagttattcccatagtagtggcaaatgaaaagggaacagcctaaatcgctaaaat 263 Query: 252 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 311 ||||||| || ||||||| ||| || || |||||| || || || |||| | | || Sbjct: 264 ggggttgggg---agcaataaaagtattttgttgctagacggagtagtggagttctgaac 320 Query: 312 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga-cccgagta 370 ||||||||| | |||||||||| |||| |||| ||||||||||| | | |||||||| Sbjct: 321 cctagatggtgagagtccagtagtataaagtatcattagcttatgcttttaacccgagta 380 Query: 371 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 430 ||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 381 gcatgggacatatggaatcccgtgtgaatcagcaaggaccaccttgaaaggctaaatact 440 Query: 431 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 490 | ||||||||| |||| |||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 441 cttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaacccccattggg 500 Query: 491 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 550 |||||| |||||| ||||| | | ||| ||||||||||||||| || || | || Sbjct: 501 gagtgaactagaacatgaaaac---atatgctaccaagcagtgggaggagacaggg--ct 555 Query: 551 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 610 |||||| |||||| ||||||||||||| |||||||||||| | |||||| |||||||||| Sbjct: 556 ctgaccacgtgcccgttgaagaatgagtcggcgactcataagtagtggcctggttaaggg 615
>emb|AJ538583.1|NTA538583 Nicotiana tabacum cDNA-AFLP-fragment BC3-M31-041 Length = 226 Score = 355 bits (179), Expect = 1e-94 Identities = 200/207 (96%) Strand = Plus / Plus Query: 308 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 367 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10 gcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 69 Query: 368 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 427 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 70 gtagcatggggcacgtggaatcccgtgtgaatcaacaaggaccaccttgcaaggctaaat 129 Query: 428 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 487 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 130 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 189 Query: 488 gggtagtgaaatagaacgtgaaaccgt 514 ||| ||||||||||||| ||||||||| Sbjct: 190 ggggagtgaaatagaacatgaaaccgt 216
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 321 bits (162), Expect = 2e-84 Identities = 227/248 (91%), Gaps = 3/248 (1%) Strand = Plus / Plus Query: 362 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 421 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 437 Query: 422 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 481 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 438 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 497 Query: 482 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 541 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 498 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 554 Query: 542 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 601 | | |||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 555 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 614 Query: 602 ggttaagg 609 |||||||| Sbjct: 615 ggttaagg 622 Score = 289 bits (146), Expect = 5e-75 Identities = 211/233 (90%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 18 cctaggcacccagagacgaagaagggcgtagcaagcgacgaaatgcttcggggagctgag 77 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 || |||||| ||||||||||| ||| |||||| ||||| || |||||||||||||| Sbjct: 78 aacaagcattgatccggagatgcccgaataggggaacctatttgactgcctgctgaattg 137 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 || | |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138 atagggaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 197 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 245 ||||||||||||||| ||||| |||||||||||||||| ||||||||||||| Sbjct: 198 gcaaaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaaccgt 250
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 321 bits (162), Expect = 2e-84 Identities = 227/248 (91%), Gaps = 3/248 (1%) Strand = Plus / Plus Query: 362 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 421 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 391 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 450 Query: 422 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 481 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 451 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 510 Query: 482 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 541 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 511 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 567 Query: 542 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 601 | | |||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 568 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 627 Query: 602 ggttaagg 609 |||||||| Sbjct: 628 ggttaagg 635 Score = 289 bits (146), Expect = 5e-75 Identities = 211/233 (90%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 31 cctaggcacccagagacgaagaagggcgtagcaagcgacgaaatgcttcggggagctgag 90 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 || |||||| ||||||||||| ||| |||||| ||||| || |||||||||||||| Sbjct: 91 aacaagcattgatccggagatgcccgaataggggaacctatttgactgcctgctgaattg 150 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 || | |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 151 atagggaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 210 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 245 ||||||||||||||| ||||| |||||||||||||||| ||||||||||||| Sbjct: 211 gcaaaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaaccgt 263
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 319 bits (161), Expect = 6e-84 Identities = 226/247 (91%), Gaps = 3/247 (1%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 496 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 555 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 556 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 615 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 542 ||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| Sbjct: 616 ccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaa 672 Query: 543 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 602 | |||||||||||||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 673 tggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctg 732 Query: 603 gttaagg 609 ||||||| Sbjct: 733 gttaagg 739 Score = 280 bits (141), Expect = 5e-72 Identities = 209/232 (90%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||| |||||||||||||||||||||||||||||||| || ||| Sbjct: 135 cctaggcacccagagacgaagaagggcgtagcaagcgacgaaatgcttcgggaagctgag 194 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 || |||||| ||||||||||| ||| |||||| ||||| || |||||||||||||| Sbjct: 195 aacaagcattgatccggagatgcccgaataggggaacctatttgactgcctgctgaattg 254 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 || | |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 255 atagggaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 314 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 244 ||||||||||||||| ||||| |||||||||||||||| |||||||||||| Sbjct: 315 gcaaaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaaccg 366
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 301 bits (152), Expect = 1e-78 Identities = 244/273 (89%), Gaps = 5/273 (1%) Strand = Plus / Plus Query: 338 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 397 |||| |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 373 aaagtatcattagcttatgctttgacccgagtagcatgggacacgtggaatcccgtgtga 432 Query: 398 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 457 |||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||| Sbjct: 433 atcagcaaggaccaccttgcaaggctaaatactcttgggtgaccaatagtgaagtagtac 492 Query: 458 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 517 | |||||||| ||||||||||||||| | |||| ||||||||||||| ||||| | | Sbjct: 493 catgagggaagggtgaaaagaacccctattggggagtgaaatagaacatgaaaac---at 549 Query: 518 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 577 |||| ||||||||||||||| | || | ||||||||||||||||||||||||||||| Sbjct: 550 aagctaccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgag 607 Query: 578 ccggcgactcataggcagtggcttggttaaggg 610 ||||||||||||| | |||||| |||||||||| Sbjct: 608 ccggcgactcataagtagtggcctggttaaggg 640 Score = 133 bits (67), Expect = 8e-28 Identities = 154/181 (85%), Gaps = 4/181 (2%) Strand = Plus / Plus Query: 137 gcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaa 196 |||| ||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 149 gcagacaagaga-aacctggtgaactgaaacatcttagtagccagaggaaaataaagcaa 207 Query: 197 aagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggt 256 ||| |||||| |||||| ||||||||||| |||| |||||||||||| |||| ||||| Sbjct: 208 aagttattcccatagtagtggcgagcgaaaagggaacagcctaaaccgctaaaatggggt 267 Query: 257 tgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctag 316 | || |||||||| ||| ||||| |||||| |||||| || |||| | | ||||||| Sbjct: 268 t---ggggagcaataaaagtattgtgttgctagacgaagcagtggagttctgaaccctag 324 Query: 317 a 317 | Sbjct: 325 a 325
>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1109A06 Length = 171438 Score = 301 bits (152), Expect = 1e-78 Identities = 158/160 (98%) Strand = Plus / Minus Query: 457 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 516 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 108050 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 107991 Query: 517 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 576 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107990 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 107931 Query: 577 gccggcgactcataggcagtggcttggttaagggaacgga 616 |||||||||||||||||||||||||||||||||||||||| Sbjct: 107930 gccggcgactcataggcagtggcttggttaagggaacgga 107891
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 299 bits (151), Expect = 6e-78 Identities = 285/329 (86%), Gaps = 3/329 (0%) Strand = Plus / Plus Query: 284 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 343 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 302 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 361 Query: 344 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 403 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 362 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 421 Query: 404 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 463 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 422 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 481 Query: 464 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 523 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 482 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 538 Query: 524 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 583 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 539 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 598 Query: 584 actcataggcagtggcttggttaagggaa 612 ||| |||||||||||| |||||||||||| Sbjct: 599 acttataggcagtggcgtggttaagggaa 627 Score = 278 bits (140), Expect = 2e-71 Identities = 226/255 (88%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||| ||||||||| | ||||||||||||||||||||||| || Sbjct: 31 cctaggcacccagagacgaagaagggcgtggtaagcgacgaaatgcttcggggagctgcg 90 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 || ||||||||||||| ||| ||| |||||| |||||| || ||| | |||||||||| Sbjct: 91 aacaagcatagatccgaagacccccgaatagggcaacctcttgtactacttgctgaatcc 150 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 || ||| | |||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 151 ataggcaagaaagagataacctggcgaactgaaacatcttagtagccagaggaaaagaaa 210 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 ||||||||||||||| ||||||||||||||||| |||| |||||||||||| |||| || Sbjct: 211 gcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaaccgcgaaagcg 270 Query: 253 gggttgtgggagagc 267 ||||||||||||||| Sbjct: 271 gggttgtgggagagc 285
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 299 bits (151), Expect = 6e-78 Identities = 285/329 (86%), Gaps = 3/329 (0%) Strand = Plus / Minus Query: 284 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 343 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 124963 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 124904 Query: 344 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 403 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 124903 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 124844 Query: 404 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 463 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 124843 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 124784 Query: 464 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 523 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 124783 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 124727 Query: 524 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 583 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 124726 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 124667 Query: 584 actcataggcagtggcttggttaagggaa 612 ||| |||||||||||| |||||||||||| Sbjct: 124666 acttataggcagtggcgtggttaagggaa 124638 Score = 299 bits (151), Expect = 6e-78 Identities = 285/329 (86%), Gaps = 3/329 (0%) Strand = Plus / Plus Query: 284 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 343 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 94903 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 94962 Query: 344 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 403 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 94963 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 95022 Query: 404 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 463 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 95023 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 95082 Query: 464 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 523 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 95083 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 95139 Query: 524 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 583 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 95140 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 95199 Query: 584 actcataggcagtggcttggttaagggaa 612 ||| |||||||||||| |||||||||||| Sbjct: 95200 acttataggcagtggcgtggttaagggaa 95228 Score = 278 bits (140), Expect = 2e-71 Identities = 226/255 (88%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||| ||||||||| | ||||||||||||||||||||||| || Sbjct: 125234 cctaggcacccagagacgaagaagggcgtggtaagcgacgaaatgcttcggggagctgcg 125175 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 || ||||||||||||| ||| ||| |||||| |||||| || ||| | |||||||||| Sbjct: 125174 aacaagcatagatccgaagacccccgaatagggcaacctcttgtactacttgctgaatcc 125115 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 || ||| | |||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125114 ataggcaagaaagagataacctggcgaactgaaacatcttagtagccagaggaaaagaaa 125055 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 ||||||||||||||| ||||||||||||||||| |||| |||||||||||| |||| || Sbjct: 125054 gcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaaccgcgaaagcg 124995 Query: 253 gggttgtgggagagc 267 ||||||||||||||| Sbjct: 124994 gggttgtgggagagc 124980 Score = 278 bits (140), Expect = 2e-71 Identities = 226/255 (88%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||| ||||||||| | ||||||||||||||||||||||| || Sbjct: 94632 cctaggcacccagagacgaagaagggcgtggtaagcgacgaaatgcttcggggagctgcg 94691 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 || ||||||||||||| ||| ||| |||||| |||||| || ||| | |||||||||| Sbjct: 94692 aacaagcatagatccgaagacccccgaatagggcaacctcttgtactacttgctgaatcc 94751 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 || ||| | |||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94752 ataggcaagaaagagataacctggcgaactgaaacatcttagtagccagaggaaaagaaa 94811 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 ||||||||||||||| ||||||||||||||||| |||| |||||||||||| |||| || Sbjct: 94812 gcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaaccgcgaaagcg 94871 Query: 253 gggttgtgggagagc 267 ||||||||||||||| Sbjct: 94872 gggttgtgggagagc 94886
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04, complete sequence Length = 141001 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 316 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 374 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 95252 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 95311 Query: 375 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 434 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 95312 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 95371 Query: 435 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 494 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 95372 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 95431 Query: 495 gaaatagaacgtgaaaccgtgctgagctcc 524 |||||||||||||||||||||||||||||| Sbjct: 95432 gaaatagaacgtgaaaccgtgctgagctcc 95461
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Minus Query: 316 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 374 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 937 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 878 Query: 375 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 434 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 877 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 818 Query: 435 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 494 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 817 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 758 Query: 495 gaaatagaacgtgaaaccgtgctgagctcc 524 |||||||||||||||||||||||||||||| Sbjct: 757 gaaatagaacgtgaaaccgtgctgagctcc 728
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 316 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 374 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11893525 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11893584 Query: 375 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 434 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11893585 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11893644 Query: 435 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 494 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11893645 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11893704 Query: 495 gaaatagaacgtgaaaccgtgctgagctcc 524 |||||||||||||||||||||||||||||| Sbjct: 11893705 gaaatagaacgtgaaaccgtgctgagctcc 11893734 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 517 tgagctcccaagcagtgggaggggaaagtgatc 549 |||||||||||| |||||||| ||||||||||| Sbjct: 9056543 tgagctcccaagtagtgggagaggaaagtgatc 9056575
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 316 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 374 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11971932 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11971991 Query: 375 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 434 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11971992 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11972051 Query: 435 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 494 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11972052 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11972111 Query: 495 gaaatagaacgtgaaaccgtgctgagctcc 524 |||||||||||||||||||||||||||||| Sbjct: 11972112 gaaatagaacgtgaaaccgtgctgagctcc 11972141 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 517 tgagctcccaagcagtgggaggggaaagtgatc 549 |||||||||||| |||||||| ||||||||||| Sbjct: 9128240 tgagctcccaagtagtgggagaggaaagtgatc 9128272
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 287 bits (145), Expect = 2e-74 Identities = 222/247 (89%), Gaps = 3/247 (1%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 378 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 437 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 438 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 497 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 542 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 498 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 554 Query: 543 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 602 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 555 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 614 Query: 603 gttaagg 609 ||||||| Sbjct: 615 gttaagg 621 Score = 182 bits (92), Expect = 9e-43 Identities = 196/231 (84%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||||| |||| ||||| |||||||||| || |||||||| ||| |||| || ||| Sbjct: 18 cctaggcatccagagacgacgaagggcgtactaatcgacgaaacgctccgggaagctgac 77 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 || |||||| ||||||||||| ||| |||||| |||||| || |||| | ||||||| Sbjct: 78 aagaagcattgatccggagatccccgaatagggcaacctcttgaactctccgctgaataa 137 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 || || | ||||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 138 ataggcggagcagagacaacctggtgaattgaaacatcttagtagccagaggaaaagaaa 197 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 243 ||||||||||||||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 198 gcaaaagcgattcccttagtagcggcgagcgaaaggggaacagtctaaacc 248
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 287 bits (145), Expect = 2e-74 Identities = 222/247 (89%), Gaps = 3/247 (1%) Strand = Plus / Minus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 115284 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 115225 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 115224 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 115165 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 542 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 115164 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 115108 Query: 543 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 602 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 115107 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 115048 Query: 603 gttaagg 609 ||||||| Sbjct: 115047 gttaagg 115041 Score = 287 bits (145), Expect = 2e-74 Identities = 222/247 (89%), Gaps = 3/247 (1%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 86704 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 86763 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 86764 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 86823 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 542 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 86824 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 86880 Query: 543 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 602 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 86881 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 86940 Query: 603 gttaagg 609 ||||||| Sbjct: 86941 gttaagg 86947 Score = 182 bits (92), Expect = 9e-43 Identities = 196/231 (84%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||||| |||| ||||| |||||||||| || |||||||| ||| |||| || ||| Sbjct: 115645 cctaggcatccagagacgacgaagggcgtactaatcgacgaaacgctccgggaagctgac 115586 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 || |||||| ||||||||||| ||| |||||| |||||| || |||| | ||||||| Sbjct: 115585 aagaagcattgatccggagatccccgaatagggcaacctcttgaactctccgctgaataa 115526 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 || || | ||||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 115525 ataggcggagcagagacaacctggtgaattgaaacatcttagtagccagaggaaaagaaa 115466 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 243 ||||||||||||||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 115465 gcaaaagcgattcccttagtagcggcgagcgaaaggggaacagtctaaacc 115415 Score = 182 bits (92), Expect = 9e-43 Identities = 196/231 (84%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||||| |||| ||||| |||||||||| || |||||||| ||| |||| || ||| Sbjct: 86343 cctaggcatccagagacgacgaagggcgtactaatcgacgaaacgctccgggaagctgac 86402 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 || |||||| ||||||||||| ||| |||||| |||||| || |||| | ||||||| Sbjct: 86403 aagaagcattgatccggagatccccgaatagggcaacctcttgaactctccgctgaataa 86462 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 || || | ||||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 86463 ataggcggagcagagacaacctggtgaattgaaacatcttagtagccagaggaaaagaaa 86522 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 243 ||||||||||||||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 86523 gcaaaagcgattcccttagtagcggcgagcgaaaggggaacagtctaaacc 86573
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 287 bits (145), Expect = 2e-74 Identities = 222/247 (89%), Gaps = 3/247 (1%) Strand = Plus / Plus Query: 362 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 421 |||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||| Sbjct: 337 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagg 396 Query: 422 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 481 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 397 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 456 Query: 482 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 541 ||| ||| ||||||||||||| |||||||| | ||| |||||||||||||| || Sbjct: 457 cccgtaggggagtgaaatagaacatgaaaccg---taagcctacaagcagtgggaggaga 513 Query: 542 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 601 | |||||||||||||||||||||||||||||||||||||||| ||| | |||||| | Sbjct: 514 atagaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataagtagtggcct 573 Query: 602 ggttaag 608 ||||||| Sbjct: 574 ggttaag 580 Score = 184 bits (93), Expect = 2e-43 Identities = 185/212 (87%), Gaps = 4/212 (1%) Strand = Plus / Plus Query: 33 gaagggcgtagcaagcgacgaaatgct-tcggggagttgaaaataagcatagatccggag 91 |||||||||| |||||||||||||||| |||| |||| || |||| || ||||||||| Sbjct: 7 gaagggcgtaacaagcgacgaaatgctctcggagagtcgagaataggct--gatccggag 64 Query: 92 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 151 || ||| |||||| ||||| |||||||| |||||||| || |||| | ||||| || Sbjct: 65 atccccgaatagggtaacctaataaactgc-tgctgaatatataggcagacgagagataa 123 Query: 152 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 211 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 124 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctcag 183 Query: 212 tagcggcgagcgaaatgggagcagcctaaacc 243 ||| |||||||||||||||| ||||||||||| Sbjct: 184 tagtggcgagcgaaatgggaacagcctaaacc 215
>dbj|AK059621.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H01, full insert sequence Length = 1729 Score = 285 bits (144), Expect = 8e-74 Identities = 152/155 (98%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1575 cctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 1634 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1635 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 1694 Query: 133 atgagcaggcaagagacaacctggcgaactgaaac 167 ||||||||||||||||||||||||||||||||||| Sbjct: 1695 atgagcaggcaagagacaacctggcgaactgaaac 1729
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 276 bits (139), Expect = 8e-71 Identities = 264/305 (86%), Gaps = 3/305 (0%) Strand = Plus / Plus Query: 308 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 367 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 4370 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 4429 Query: 368 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 427 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 4430 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 4489 Query: 428 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 487 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4490 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 4549 Query: 488 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 547 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 4550 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 4606 Query: 548 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 607 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4607 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 4666 Query: 608 gggaa 612 ||||| Sbjct: 4667 gggaa 4671 Score = 226 bits (114), Expect = 7e-56 Identities = 201/229 (87%), Gaps = 1/229 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||| || ||| ||||| ||||||||||| |||||||||||||||||||||||| ||| Sbjct: 4064 cctaggtactcagagacgaagaagggcgtagtaagcgacgaaatgcttcggggagtcgaa 4123 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 || | |||||||||||||||||||| ||| || |||| || |||||| ||||||||| Sbjct: 4124 aacaggcatagatccggagattcccgaatggggtaaccccttgtactgcc-gctgaatcc 4182 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 || || | |||||| ||||||| ||||||||||||||||||||||||||||||| ||| Sbjct: 4183 ataggcggataagagagaacctggtgaactgaaacatcttagtagccagaggaaaaaaaa 4242 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 241 ||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 4243 gcaaaagcgattccctgagtagcggcgagcgaaatgggagaagcctaaa 4291
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 276 bits (139), Expect = 8e-71 Identities = 264/305 (86%), Gaps = 3/305 (0%) Strand = Plus / Plus Query: 308 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 367 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 368 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 427 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 428 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 487 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 488 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 547 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573 Query: 548 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 607 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 633 Query: 608 gggaa 612 ||||| Sbjct: 634 gggaa 638 Score = 218 bits (110), Expect = 2e-53 Identities = 200/229 (87%), Gaps = 1/229 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||| || ||| ||||| ||||||||||| |||||||||||||||||||||||| ||| Sbjct: 31 cctaggtactcagagacgaagaagggcgtagtaagcgacgaaatgcttcggggagtcgaa 90 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 || | |||||||||||||||||||| ||| || |||| || |||||| ||||||| | Sbjct: 91 aacaggcatagatccggagattcccgaatggggtaaccccttgtactgcc-gctgaatac 149 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 || || | |||||| ||||||| ||||||||||||||||||||||||||||||| ||| Sbjct: 150 ataggcggataagagagaacctggtgaactgaaacatcttagtagccagaggaaaaaaaa 209 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 241 ||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 210 gcaaaagcgattccctgagtagcggcgagcgaaatgggagaagcctaaa 258
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 276 bits (139), Expect = 8e-71 Identities = 264/305 (86%), Gaps = 3/305 (0%) Strand = Plus / Plus Query: 308 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 367 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 368 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 427 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 428 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 487 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 488 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 547 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573 Query: 548 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 607 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 633 Query: 608 gggaa 612 ||||| Sbjct: 634 gggaa 638 Score = 226 bits (114), Expect = 7e-56 Identities = 201/229 (87%), Gaps = 1/229 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||| || ||| ||||| ||||||||||| |||||||||||||||||||||||| ||| Sbjct: 31 cctaggtactcagagacgaagaagggcgtagtaagcgacgaaatgcttcggggagtcgaa 90 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 || | |||||||||||||||||||| ||| || |||| || |||||| ||||||||| Sbjct: 91 aacaggcatagatccggagattcccgaatggggtaaccccttgtactgcc-gctgaatcc 149 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 || || | |||||| ||||||| ||||||||||||||||||||||||||||||| ||| Sbjct: 150 ataggcggataagagagaacctggtgaactgaaacatcttagtagccagaggaaaaaaaa 209 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 241 ||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 210 gcaaaagcgattccctgagtagcggcgagcgaaatgggagaagcctaaa 258
>gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6393 Score = 274 bits (138), Expect = 3e-70 Identities = 222/247 (89%), Gaps = 6/247 (2%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 410 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 469 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 470 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 529 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 542 || | ||| ||||||||||||| ||||||||| | ||| |||||||||||| |||| Sbjct: 530 ccggaggggagtgaaatagaacatgaaaccgtcc---gctgacaagcagtggga--ggaa 584 Query: 543 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 602 | ||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 585 atagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttg 643 Query: 603 gttaagg 609 ||||||| Sbjct: 644 gttaagg 650 Score = 95.6 bits (48), Expect = 2e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 143 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 202 ||||| ||||| || ||| ||||||||||||||| || ||||||||||||||||| |||| Sbjct: 148 aagaggcaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcga 207 Query: 203 ttcccgtagtagcggcgagcgaaatgggagcagcctaaac 242 || || ||||||||||||||||| || | |||||||||| Sbjct: 208 tttcctgagtagcggcgagcgaaacggaatcagcctaaac 247
>gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2619 Score = 274 bits (138), Expect = 3e-70 Identities = 222/247 (89%), Gaps = 6/247 (2%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 490 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 542 || | ||| |||||||||||||| |||||||| | ||| |||||||||||| |||| Sbjct: 491 ccggaggggagtgaaatagaacgcgaaaccgtcc---gctgacaagcagtggga--ggaa 545 Query: 543 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 602 ||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 546 gaagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttg 604 Query: 603 gttaagg 609 ||||||| Sbjct: 605 gttaagg 611 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Plus Query: 143 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 202 ||||||||||| || ||| ||||||||||||||| || |||||||||||||||||||||| Sbjct: 140 aagagacaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaaagcga 199 Query: 203 ttcccgtagtagcggcgagcgaa 225 || || ||||||||||||||||| Sbjct: 200 tttccttagtagcggcgagcgaa 222
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 274 bits (138), Expect = 3e-70 Identities = 141/142 (99%) Strand = Plus / Minus Query: 28 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 87 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19434061 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 19434002 Query: 88 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 147 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 19434001 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 19433942 Query: 148 acaacctggcgaactgaaacat 169 |||||||||||||||||||||| Sbjct: 19433941 acaacctggcgaactgaaacat 19433920 Score = 83.8 bits (42), Expect = 6e-13 Identities = 42/42 (100%) Strand = Plus / Minus Query: 537 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 578 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 12182494 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 12182453 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 455 taccgtgagggaaaggtgaaaagaacc 481 |||||||||||||||||||||| |||| Sbjct: 14553517 taccgtgagggaaaggtgaaaataacc 14553543
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 274 bits (138), Expect = 3e-70 Identities = 141/142 (99%) Strand = Plus / Minus Query: 28 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 87 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51588 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 51529 Query: 88 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 147 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 51528 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 51469 Query: 148 acaacctggcgaactgaaacat 169 |||||||||||||||||||||| Sbjct: 51468 acaacctggcgaactgaaacat 51447
>dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0475F05 Length = 147522 Score = 274 bits (138), Expect = 3e-70 Identities = 141/142 (99%) Strand = Plus / Minus Query: 28 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 87 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119552 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 119493 Query: 88 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 147 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119492 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 119433 Query: 148 acaacctggcgaactgaaacat 169 |||||||||||||||||||||| Sbjct: 119432 acaacctggcgaactgaaacat 119411
>emb|AJ535053.1|OSA535053 Oryza sativa (japonica cultivar-group) pdr2 gene for PDR-like ABC transporter, exons 1-22 Length = 15112 Score = 274 bits (138), Expect = 3e-70 Identities = 141/142 (99%) Strand = Plus / Plus Query: 28 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 87 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6070 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 6129 Query: 88 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 147 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 6130 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 6189 Query: 148 acaacctggcgaactgaaacat 169 |||||||||||||||||||||| Sbjct: 6190 acaacctggcgaactgaaacat 6211
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 260 bits (131), Expect = 5e-66 Identities = 223/253 (88%), Gaps = 3/253 (1%) Strand = Plus / Plus Query: 357 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 416 |||| |||||||||||||| |||||||| || | |||||||||||| |||||||||| | Sbjct: 338 ctctaacccgagtagcatgaggcacgtgaaaccttgtgtgaatcagcgaggaccacctcg 397 Query: 417 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 476 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 398 taaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaa 457 Query: 477 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 536 ||||||||| |||| ||||||||||| |||||||| | ||| |||||||||||| Sbjct: 458 gaacccccactggggagtgaaatagataatgaaaccg---taagcctacaagcagtggga 514 Query: 537 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagt 596 || || | || ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 515 ggaaaatataatttctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagt 574 Query: 597 ggcttggttaagg 609 ||| ||||||||| Sbjct: 575 ggcctggttaagg 587 Score = 139 bits (70), Expect = 1e-29 Identities = 88/94 (93%) Strand = Plus / Plus Query: 150 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 209 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 125 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatttcctt 184 Query: 210 agtagcggcgagcgaaatgggagcagcctaaacc 243 ||||| ||||||||||| || | ||||||||||| Sbjct: 185 agtagtggcgagcgaaacggaatcagcctaaacc 218 Score = 54.0 bits (27), Expect = 6e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 22 ccagngacgaggaagggcgtagcaagcgacgaaatgcttcgg 63 |||| ||||| ||||||||||| ||||||||||| ||||||| Sbjct: 1 ccagagacgaagaagggcgtagtaagcgacgaaacgcttcgg 42
>dbj|AP006444.1| Brassica napus mitochondrial DNA, complete genome Length = 221853 Score = 254 bits (128), Expect = 3e-64 Identities = 171/183 (93%), Gaps = 2/183 (1%) Strand = Plus / Minus Query: 16 aggcacccagngacgaggaagggcgtagcaagcgacgaaa-tgcttcggggagttgaaaa 74 |||||||||| |||||||||| |||||| ||||||||||| ||||||||||||||||||| Sbjct: 89849 aggcacccagagacgaggaagagcgtagtaagcgacgaaaatgcttcggggagttgaaaa 89790 Query: 75 taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccat 134 ||||| |||||||||||||||| ||||||| |||||||| |||||| |||||||||||| Sbjct: 89789 taagcgtagatccggagattccggaataggttaaccttttgaactgc-tgctgaatccat 89731 Query: 135 gagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagc 194 | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 89730 gggcaggcaagagacaacctggcgaactgaaacatcttactagccagaggaaaagaaagc 89671 Query: 195 aaa 197 ||| Sbjct: 89670 aaa 89668 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 437 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 120438 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 120483
>gb|AC172860.1| Brassica rapa subsp. pekinensis clone KBrB042G11, complete sequence Length = 124347 Score = 254 bits (128), Expect = 3e-64 Identities = 171/183 (93%), Gaps = 2/183 (1%) Strand = Plus / Plus Query: 16 aggcacccagngacgaggaagggcgtagcaagcgacgaaa-tgcttcggggagttgaaaa 74 |||||||||| |||||||||| |||||| ||||||||||| ||||||||||||||||||| Sbjct: 421 aggcacccagagacgaggaagagcgtagtaagcgacgaaaatgcttcggggagttgaaaa 480 Query: 75 taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccat 134 ||||| |||||||||||||||| ||||||| |||||||| |||||| |||||||||||| Sbjct: 481 taagcgtagatccggagattccggaataggttaaccttttgaactgc-tgctgaatccat 539 Query: 135 gagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagc 194 | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 540 gggcaggcaagagacaacctggcgaactgaaacatcttactagccagaggaaaagaaagc 599 Query: 195 aaa 197 ||| Sbjct: 600 aaa 602 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 437 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 42056 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 42101
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 252 bits (127), Expect = 1e-63 Identities = 225/257 (87%), Gaps = 3/257 (1%) Strand = Plus / Plus Query: 356 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 415 ||||| |||| ||||||||||| |||||| ||||||||||||||| || |||||||||| Sbjct: 380 gctctaacccaagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctc 439 Query: 416 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 475 ||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 440 gcaaggctaaatacttctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaa 499 Query: 476 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 535 |||||||||| ||| ||||||| ||||| |||||||| | ||| ||||||||||| Sbjct: 500 agaacccccataggggagtgaaaaagaacatgaaaccg---taggctttcaagcagtggg 556 Query: 536 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 595 || ||| | |||| |||||||||||||||||||||||||||||||||||||||| || Sbjct: 557 agaagaattttatctttgaccgcgtgcctgttgaagaatgagccggcgactcatagatag 616 Query: 596 tggcttggttaagggaa 612 ||||| ||||||||||| Sbjct: 617 tggctgggttaagggaa 633 Score = 196 bits (99), Expect = 6e-47 Identities = 199/230 (86%), Gaps = 2/230 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||| || ||| ||||| ||||||||||| ||||||||||| |||||||||||| ||| Sbjct: 31 cctaggtactcagagacgaagaagggcgtagtaagcgacgaaacgcttcggggagtcgaa 90 Query: 73 aataagcatagatccggagattcccaaataggtcaacct-tttaaactgcctgctgaatc 131 || | | ||||||||||||||||| ||| || |||| ||| |||||| ||||||| Sbjct: 91 aacagacgtagatccggagattcccgaatggggtaacccctttgtactgcc-gctgaatt 149 Query: 132 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 191 ||| ||| | |||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 150 cataagcggataagagacaacctggtgaactgaaacatcttagtaaccagaggaaaagaa 209 Query: 192 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 241 ||||||||||||| || ||||||||||||||||||||||| |||||||| Sbjct: 210 agcaaaagcgatttcctgagtagcggcgagcgaaatgggagaagcctaaa 259
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 242 bits (122), Expect = 1e-60 Identities = 217/247 (87%), Gaps = 5/247 (2%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 376 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 435 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 || |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 436 tacatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 495 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 542 || ||| ||||||| ||| | |||||||| || ||| |||||||||||||||| Sbjct: 496 ccgcaggggagtgaaaaagatcatgaaaccg---tgtgcttacaagcagtgggagggg-- 550 Query: 543 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 602 ||| | |||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 551 cctgagccctgaccgcgtgcctgttgaagaatgagccggcgacttttagcaagtggcttg 610 Query: 603 gttaagg 609 ||||||| Sbjct: 611 gttaagg 617 Score = 161 bits (81), Expect = 3e-36 Identities = 194/232 (83%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||||||| || ||||| ||||||||| | | |||||| | ||| ||||||| || | Sbjct: 18 cctaggcacctagagacgaagaagggcgtcactaccgacgatacgctccggggagctgga 77 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 | ||||| | ||||||||||||||| ||| || |||||| ||| |||||||||| | Sbjct: 78 agtaagcttcgatccggagattcccgaatggggcaacctcaaggactccctgctgaattc 137 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 || ||||| |||| |||| || |||||||||||||||||||||| |||||||||||| Sbjct: 138 ataggcagggtagaggaaacccggtgaactgaaacatcttagtagccggaggaaaagaaa 197 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 244 ||||| ||||||||| |||||||||||||||||| |||| |||||||||||| Sbjct: 198 gcaaacgcgattcccttagtagcggcgagcgaaacgggaccagcctaaaccg 249
>gb|DQ160045.1| Taraxacum officinale To45-1 mRNA, partial sequence Length = 329 Score = 240 bits (121), Expect = 4e-60 Identities = 145/153 (94%) Strand = Plus / Minus Query: 291 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 350 |||||| || || ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 329 cgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 270 Query: 351 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 410 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 210 Query: 411 accttgcaaggctaaatactcctgggtgaccga 443 |||||||||||||||||||||||| | |||||| Sbjct: 209 accttgcaaggctaaatactcctgcgggaccga 177
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 240 bits (121), Expect = 4e-60 Identities = 209/237 (88%), Gaps = 6/237 (2%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 398 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 457 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 458 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 517 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 542 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 518 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 574 Query: 543 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 | | | |||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 575 a---agccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcactggc 628 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 144 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 203 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 149 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 208 Query: 204 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 244 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 209 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 249 Score = 95.6 bits (48), Expect = 2e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||| ||||||||||| || |||||||| ||||||||||| || | Sbjct: 18 cctaggcacccagagacgatgaagggcgtagtaaccgacgaaacgcttcggggagctgga 77 Query: 73 aataagcatagatccggagattcccaaataggtcaacct 111 || |||| | |||||| |||||||| |||||| |||||| Sbjct: 78 aacaagctttgatccgtagattcccgaatagggcaacct 116
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 240 bits (121), Expect = 4e-60 Identities = 209/237 (88%), Gaps = 6/237 (2%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 2167 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 2226 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 2227 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 2286 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 542 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 2287 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 2343 Query: 543 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 | | | |||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2344 a---agccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcactggc 2397 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 144 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 203 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 1915 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 1974 Query: 204 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 244 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 1975 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 2015 Score = 95.6 bits (48), Expect = 2e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||| ||||||||||| || |||||||| ||||||||||| || | Sbjct: 1784 cctaggcacccagagacgatgaagggcgtagtaaccgacgaaacgcttcggggagctgga 1843 Query: 73 aataagcatagatccggagattcccaaataggtcaacct 111 || |||| | |||||| |||||||| |||||| |||||| Sbjct: 1844 aacaagctttgatccgtagattcccgaatagggcaacct 1882
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 238 bits (120), Expect = 2e-59 Identities = 219/249 (87%), Gaps = 6/249 (2%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 355 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 414 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa-gaacc 481 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 415 taaatactcctgggtaaccgatagtgaagtagtaccgtgagggaaaggtgaaaaagaacc 474 Query: 482 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 541 || | ||| ||||||| ||||| ||||||| || |||| |||||||||||| ||| Sbjct: 475 cctggaggggagtgaaaaagaacatgaaacc---ctaagctgacaagcagtggga--gga 529 Query: 542 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 601 | | |||||||||||||||||||||||||||||||||||||| || | |||||||| Sbjct: 530 cttttaagtctgaccgcgtgcctgttgaagaatgagccggcgactcctaagaagtggctt 589 Query: 602 ggttaaggg 610 ||||||||| Sbjct: 590 ggttaaggg 598 Score = 123 bits (62), Expect = 7e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 149 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 208 ||||| || ||| |||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 64 caacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcgattcccc 123 Query: 209 tagtagcggcgagcgaaatgggagcagcctaaac 242 |||||||||||||||||| |||| |||||||||| Sbjct: 124 tagtagcggcgagcgaaaagggaacagcctaaac 157
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 236 bits (119), Expect = 7e-59 Identities = 217/249 (87%), Gaps = 3/249 (1%) Strand = Plus / Plus Query: 362 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 421 |||||||||||||| |||||||| || | ||||||||||||| |||||||||| | |||| Sbjct: 784 acccgagtagcatgaggcacgtgaaacctcgtgtgaatcagcgaggaccacctcgtaagg 843 Query: 422 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 481 |||||||||||| ||||| |||||| |||| ||||||||||||||||||||||||||||| Sbjct: 844 ctaaatactcctaggtgatcgatagtgaagaagtaccgtgagggaaaggtgaaaagaacc 903 Query: 482 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 541 |||| ||| ||||||||||| |||||||| | |||| ||||||||||||| || Sbjct: 904 cccataggggagtgaaatagactatgaaaccg---taagcttacaagcagtgggagaaga 960 Query: 542 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 601 | | |||| ||||||||||||||||||||||||||||||||||| ||| |||||||| | Sbjct: 961 atctaatctttgaccgcgtgcctgttgaagaatgagccggcgacttataagcagtggcct 1020 Query: 602 ggttaaggg 610 ||||||||| Sbjct: 1021 ggttaaggg 1029 Score = 172 bits (87), Expect = 9e-40 Identities = 187/218 (85%), Gaps = 3/218 (1%) Strand = Plus / Plus Query: 28 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 87 |||| ||||||||||| ||||||||||||||||||| | || || ||| || | || Sbjct: 449 acgatgaagggcgtagaaagcgacgaaatgcttcggttaactgcgaacaag--taaaccc 506 Query: 88 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 147 |||||||||| |||||| |||||| | ||||||| |||||||| ||| || | ||||| Sbjct: 507 ggagattcccgaatagggcaacctgt-aaactgcttgctgaattcataggcgagtaagag 565 Query: 148 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 207 ||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 566 acaacctggtgaactgaaacatcttagtaaccagaggaacagaaagcaaaagcgattccc 625 Query: 208 gtagtagcggcgagcgaaatgggagcagcctaaaccgt 245 |||||| ||||||||||| |||| ||||||||||||| Sbjct: 626 ttagtagtggcgagcgaaacgggaacagcctaaaccgt 663
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 232 bits (117), Expect = 1e-57 Identities = 180/201 (89%) Strand = Plus / Plus Query: 310 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 369 ||||||||||| | |||||||||| |||| |||| ||||||||||| |||| ||||| Sbjct: 332 accctagatggtgagagtccagtagtataaagtatcattagcttatgctttgactcgagt 391 Query: 370 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 429 |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 392 agcatgggacacgtggaatcccgtgtgaatcagcaaggatcaccttgcaaggctaaatac 451 Query: 430 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 489 || ||||||||| |||| |||||||||||||||||||| ||||||||||||| | | ||| Sbjct: 452 tcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaacctctactgg 511 Query: 490 gtagtgaaatagaacgtgaaa 510 | ||||||||||||| ||||| Sbjct: 512 ggagtgaaatagaacatgaaa 532 Score = 180 bits (91), Expect = 4e-42 Identities = 210/246 (85%), Gaps = 3/246 (1%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| || || ||||||| || || || |||||||||||||||||| || Sbjct: 29 cctaggcacccagggatgaagaagggcataataattgatgaaatgcttcggggagttaaa 88 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||||| ||||||||||||||||||| ||||||| ||||||| |||||| ||||| | ||| Sbjct: 89 aataaacatagatccggagattcccgaataggtaaacctttaaaactg-ctgcttattcc 147 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 ||| |||| ||| ||| ||||||| |||||||| ||||||||||| |||||||||| ||| Sbjct: 148 atg-gcagacaaaaga-aacctggtgaactgaatcatcttagtagacagaggaaaataaa 205 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 ||||||| ||| || |||||| |||||| |||| |||| |||||||||||| |||| | Sbjct: 206 gcaaaagttattaccatagtagtggcgagtgaaaagggaacagcctaaaccgctaaaatg 265 Query: 253 gggttg 258 |||||| Sbjct: 266 gggttg 271 Score = 91.7 bits (46), Expect = 3e-15 Identities = 58/62 (93%) Strand = Plus / Plus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 608 ||||||| |||| ||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 566 ctctgactgcgttcctgttgaagaatgagccggcgactcataagtagtggcttggttaag 625 Query: 609 gg 610 || Sbjct: 626 gg 627
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 230 bits (116), Expect = 4e-57 Identities = 214/246 (86%), Gaps = 3/246 (1%) Strand = Plus / Plus Query: 367 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 426 ||||| ||||| |||||| |||||| | |||||| |||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatctacaaggaccaccttgtaaggctaaa 444 Query: 427 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 486 |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgcgagggaaaggtgaaaagaacccccat 504 Query: 487 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 546 ||| ||||||||||||| ||||||| | |||| |||||||||||||| | | Sbjct: 505 aggggagtgaaatagaacatgaaacc---ataagctttcaagcagtgggaggaggattga 561 Query: 547 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 606 | || ||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 562 acctttgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggtta 621 Query: 607 agggaa 612 |||||| Sbjct: 622 agggaa 627 Score = 206 bits (104), Expect = 6e-50 Identities = 214/251 (85%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||||| |||| ||||| ||||||||||| |||||||||||||||||||||| || Sbjct: 31 cctaggcatccagagacgaagaagggcgtagtcagcgacgaaatgcttcggggagctgcg 90 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 || ||||||| ||||| |||||||| |||||| ||||| || ||| |||| |||| Sbjct: 91 aacaagcataaatccgaagattcccgaatagggtaacctcttgtactacctgtagaatta 150 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 || | |||| ||||| ||||| | ||||||||||||||||||||| ||||||||||||| Sbjct: 151 ataatcaggttagagaaaacctagtgaactgaaacatcttagtagctagaggaaaagaaa 210 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 ||||||||||||||| ||||| ||||||||||| |||| |||||||||||| |||| || Sbjct: 211 gcaaaagcgattccctcagtagtggcgagcgaaacgggaacagcctaaaccgcgaaagcg 270 Query: 253 gggttgtggga 263 ||||||||||| Sbjct: 271 gggttgtggga 281
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 226 bits (114), Expect = 7e-56 Identities = 218/253 (86%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||||| |||| ||||| ||||||||||| ||||||||||||||||||||||| || Sbjct: 31 cctaggcatccagagacgaagaagggcgtagtaagcgacgaaatgcttcggggagctgcg 90 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 || ||| ||||||||| |||||||| |||||| |||||| || ||| |||| ||| | Sbjct: 91 aacaagtatagatccgaagattcccgaatagggcaacctcttgtactacctgtaaaatac 150 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 || | |||| ||||| ||||| | ||||||||||||||||||||| ||||||| | ||| Sbjct: 151 ataatcaggttagagaaaacctagtgaactgaaacatcttagtagctagaggaataaaaa 210 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 ||||||||||||||| |||||| ||||||||||| |||| ||||||||||||||||| || Sbjct: 211 gcaaaagcgattcccttagtagtggcgagcgaaacgggaacagcctaaaccgtgaaagcg 270 Query: 253 gggttgtgggaga 265 ||||||||||||| Sbjct: 271 gggttgtgggaga 283 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 367 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 426 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 444 Query: 427 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 486 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 504 Query: 487 tgggtagtgaaatagaacgtgaaacc 512 ||| ||||||||||||| ||||||| Sbjct: 505 aggggagtgaaatagaacatgaaacc 530 Score = 105 bits (53), Expect = 2e-19 Identities = 59/61 (96%) Strand = Plus / Plus Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 611 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 626 Query: 612 a 612 | Sbjct: 627 a 627
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 325 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 384 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 385 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 444 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 445 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 504 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 505 gtgaaa 510 ||||| Sbjct: 504 atgaaa 509 Score = 155 bits (78), Expect = 2e-34 Identities = 195/229 (85%), Gaps = 4/229 (1%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| | ||| ||||||| || || || |||||||||||||||||| || Sbjct: 29 cctaggcacccagggtcgaagaagggcataataattgatgaaatgcttcggggagttaaa 88 Query: 73 aa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 131 || ||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| | || Sbjct: 89 aaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgcttattc 147 Query: 132 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 191 |||| | || ||||||| |||| || ||||||||||||||||||| ||||||||||| || Sbjct: 148 catg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaaaataa 205 Query: 192 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 206 agcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 608 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 609 gg 610 || Sbjct: 602 gg 603
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 325 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 384 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 385 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 444 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 445 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 504 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 505 gtgaaa 510 ||||| Sbjct: 503 atgaaa 508 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 52 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 110 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 111 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 170 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 171 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 230 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 231 agcagcctaa 240 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 608 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 609 gg 610 || Sbjct: 601 gg 602
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 325 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 384 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 385 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 444 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 445 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 504 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 505 gtgaaa 510 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 52 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 110 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 111 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 170 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 171 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 230 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 231 agcagcctaa 240 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 608 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 609 gg 610 || Sbjct: 602 gg 603
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 325 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 384 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 385 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 444 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 445 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 504 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 505 gtgaaa 510 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 52 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 110 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 111 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 170 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 171 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 230 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 231 agcagcctaa 240 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 608 |||||||| ||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccacgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 609 gg 610 || Sbjct: 602 gg 603
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 325 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 384 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 385 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 444 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 445 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 504 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 505 gtgaaa 510 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 52 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 110 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 111 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 170 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 171 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 230 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 231 agcagcctaa 240 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 608 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 609 gg 610 || Sbjct: 602 gg 603
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 325 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 384 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 385 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 444 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 445 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 504 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 505 gtgaaa 510 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 159/182 (87%), Gaps = 4/182 (2%) Strand = Plus / Plus Query: 52 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 110 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 111 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 170 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 171 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 230 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 231 ag 232 || Sbjct: 245 ag 246 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 608 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 609 gg 610 || Sbjct: 602 gg 603
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 325 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 384 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 385 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 444 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 445 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 504 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 505 gtgaaa 510 ||||| Sbjct: 503 atgaaa 508 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 52 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 110 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 111 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 170 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 171 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 230 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 231 agcagcctaa 240 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 608 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 609 gg 610 || Sbjct: 601 gg 602
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 325 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 384 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 385 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 444 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 445 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 504 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 505 gtgaaa 510 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 52 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 110 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 111 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 170 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 171 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 230 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 231 agcagcctaa 240 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 608 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 609 gg 610 || Sbjct: 602 gg 603
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 325 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 384 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 385 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 444 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 445 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 504 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 505 gtgaaa 510 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 52 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 110 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 111 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 170 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 171 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 230 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 231 agcagcctaa 240 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 608 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 609 gg 610 || Sbjct: 602 gg 603
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 325 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 384 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 385 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 444 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 445 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 504 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 505 gtgaaa 510 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 52 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 110 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 111 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 170 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 171 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 230 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 231 agcagcctaa 240 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 608 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 609 gg 610 || Sbjct: 602 gg 603
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 325 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 384 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 385 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 444 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 445 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 504 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 505 gtgaaa 510 ||||| Sbjct: 504 atgaaa 509 Score = 155 bits (78), Expect = 2e-34 Identities = 166/190 (87%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 52 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 110 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 111 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 170 ||| ||||||| |||| | |||||| | || ||||||| |||| |||||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggcgaactgaaacatc 184 Query: 171 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 230 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 231 agcagcctaa 240 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 608 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 609 gg 610 || Sbjct: 602 gg 603
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 325 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 384 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 385 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 444 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 445 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 504 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 505 gtgaaa 510 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 52 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 110 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 111 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 170 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 171 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 230 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 231 agcagcctaa 240 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 608 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 609 gg 610 || Sbjct: 602 gg 603
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 325 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 384 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 385 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 444 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 445 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 504 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 505 gtgaaa 510 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 52 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 110 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 111 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 170 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 171 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 230 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 231 agcagcctaa 240 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 608 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 609 gg 610 || Sbjct: 602 gg 603
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 325 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 384 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 385 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 444 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 445 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 504 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 505 gtgaaa 510 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 52 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 110 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 111 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 170 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 171 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 230 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 231 agcagcctaa 240 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 608 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 609 gg 610 || Sbjct: 602 gg 603
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 325 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 384 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 385 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 444 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 445 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 504 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 505 gtgaaa 510 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 52 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 110 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 111 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 170 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 171 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 230 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 231 agcagcctaa 240 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 608 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 609 gg 610 || Sbjct: 602 gg 603
>gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 6750 Score = 218 bits (110), Expect = 2e-53 Identities = 216/249 (86%), Gaps = 8/249 (3%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 540 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 ||| || |||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgacttatagggagtggct 620 Query: 601 tggttaagg 609 ||||||||| Sbjct: 621 tggttaagg 629 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 158 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 217 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 218 cgagcgaaatgggagcagcctaaacc 243 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261 Score = 48.1 bits (24), Expect = 0.034 Identities = 80/99 (80%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||| ||| ||||| |||||||| || | || ||||| ||||||||||| || Sbjct: 29 cctaggcactcagagacgatgaagggcgcagataccggcgaaacgcttcggggagctggc 88 Query: 73 aataagcatagatccggagattcccaaataggtcaacct 111 || |||| | |||||| |||| ||| |||||| |||||| Sbjct: 89 aacaagctttgatccgaagatccccgaatagggcaacct 127
>emb|X68905.1|CHCFRRNL1 Chloroplast Chlamydomonas frankii rrnL gene, exon 1 Length = 1282 Score = 218 bits (110), Expect = 2e-53 Identities = 216/249 (86%), Gaps = 8/249 (3%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 540 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 ||| || |||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgacttatagggagtggct 620 Query: 601 tggttaagg 609 ||||||||| Sbjct: 621 tggttaagg 629 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 158 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 217 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 218 cgagcgaaatgggagcagcctaaacc 243 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261 Score = 48.1 bits (24), Expect = 0.034 Identities = 80/99 (80%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||| ||| ||||| |||||||| || | || ||||| ||||||||||| || Sbjct: 29 cctaggcactcagagacgatgaagggcgcagataccggcgaaacgcttcggggagctggc 88 Query: 73 aataagcatagatccggagattcccaaataggtcaacct 111 || |||| | |||||| |||| ||| |||||| |||||| Sbjct: 89 aacaagctttgatccgaagatccccgaatagggcaacct 127
>gb|L49155.1|NEHCPRGOLA Neochloris aquatica chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5569 Score = 214 bits (108), Expect = 3e-52 Identities = 206/237 (86%), Gaps = 5/237 (2%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| | Sbjct: 517 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagac 576 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||| | ||||||||||||| |||||| | || ||||||||||||||||||| Sbjct: 577 taaatactcctgagagaccgatagcgaaatagtacagcgatggaaaggtgaaaagaaccc 636 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 542 || ||| ||||||||||||| ||||| || |||||| |||||||||||| ||| Sbjct: 637 ccgtaggggagtgaaatagaacatgaaatcg---tgagctgacaagcagtggga--ggat 691 Query: 543 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 ||| ||||||||||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 692 tttgaaatctgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggc 748 Score = 129 bits (65), Expect = 1e-26 Identities = 83/89 (93%) Strand = Plus / Plus Query: 143 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 202 ||||| |||||||| |||||||||||||| ||||||||||||| ||||| |||||||||| Sbjct: 148 aagaggcaacctggtgaactgaaacatctcagtagccagaggagaagaacgcaaaagcga 207 Query: 203 ttcccgtagtagcggcgagcgaaatggga 231 ||||| ||||||||||||||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatggga 236
>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2920 Score = 212 bits (107), Expect = 1e-51 Identities = 140/151 (92%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 601 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 660 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 661 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtaaaaagaaccc 720 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccg 513 || |||| ||||||||||||| |||||||| Sbjct: 721 ccgttggggagtgaaatagaacatgaaaccg 751 Score = 151 bits (76), Expect = 3e-33 Identities = 166/196 (84%) Strand = Plus / Plus Query: 48 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 107 |||||||| ||||||||||| || ||||||| | |||||| |||| ||| |||||| || Sbjct: 45 cgacgaaacgcttcggggagctggcaataagcgttgatccgaagatccccgaatagggca 104 Query: 108 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 167 |||| |||| ||| | ||| ||| || |||||||||| |||| || |||||||||| Sbjct: 105 acctcaagaactacctccctaattcataaggaggcaagagagaacccggtgaactgaaac 164 Query: 168 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 227 |||| ||||||| ||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 165 atctaagtagccggaggaaaagaaagcaaacgcgattcccatagtagcggcgagcgaaaa 224 Query: 228 gggagcagcctaaacc 243 |||| ||||||||||| Sbjct: 225 gggaacagcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 551 ctgaccgcgtgcctgttgaagaatgagccggcgact 586 |||||||||||||||||||||||||||||||||||| Sbjct: 796 ctgaccgcgtgcctgttgaagaatgagccggcgact 831
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 210 bits (106), Expect = 4e-51 Identities = 166/186 (89%) Strand = Plus / Plus Query: 325 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 384 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 385 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 444 ||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccatgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 445 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 504 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 505 gtgaaa 510 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 159/182 (87%), Gaps = 4/182 (2%) Strand = Plus / Plus Query: 52 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 110 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 111 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 170 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 171 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 230 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 231 ag 232 || Sbjct: 245 ag 246 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 608 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 609 gg 610 || Sbjct: 602 gg 603
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 210 bits (106), Expect = 4e-51 Identities = 216/253 (85%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||||| |||| ||||| ||||||||||| |||||||||||||||| |||||| || Sbjct: 3065 cctaggcatccagagacgaagaagggcgtagtaagcgacgaaatgctttggggagctgcg 3124 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 || ||| ||||||||| |||||||| |||||| |||||| || ||| |||| ||| | Sbjct: 3125 aacaagtatagatccgaagattcccgaatagggcaacctcttgtactacctgtaaaatac 3184 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 || |||| ||||| ||||| | ||||||||||||||||||||| ||||||| | ||| Sbjct: 3185 atagtcaggttagagaaaacctagtgaactgaaacatcttagtagctagaggaataaaaa 3244 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 ||||||||||||||| |||||| ||||||||||| |||| ||||||||||||||||| || Sbjct: 3245 gcaaaagcgattcccttagtagtggcgagcgaaacgggaacagcctaaaccgtgaaagcg 3304 Query: 253 gggttgtgggaga 265 ||||||||||||| Sbjct: 3305 gggttgtgggaga 3317 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 367 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 426 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 3419 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 3478 Query: 427 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 486 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 3479 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 3538 Query: 487 tgggtagtgaaatagaacgtgaaacc 512 ||| ||||||||||||| ||||||| Sbjct: 3539 aggggagtgaaatagaacatgaaacc 3564 Score = 105 bits (53), Expect = 2e-19 Identities = 59/61 (96%) Strand = Plus / Plus Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 611 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 3601 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 3660 Query: 612 a 612 | Sbjct: 3661 a 3661
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 206 bits (104), Expect = 6e-50 Identities = 140/152 (92%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 691 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 750 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||||||||||||||||||| |||||||| ||||||| ||| |||||||||| Sbjct: 751 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaagggtaaaaagaaccc 810 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgt 514 || |||| ||||||||||||| ||||||||| Sbjct: 811 ccgttggggagtgaaatagaacatgaaaccgt 842 Score = 151 bits (76), Expect = 3e-33 Identities = 192/231 (83%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||| |||||||| | | || ||||| ||||||||||| || Sbjct: 11 cctaggcacccagagacgaagaagggcgcaaataccggcgaaacgcttcggggagctggc 70 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 ||| ||| | |||||| |||| ||| |||||| |||||| | ||| ||| | ||| | Sbjct: 71 aatgagctttgatccgaagatccccgaatagggcaacctctagcactacctccataattc 130 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 || | |||||||||| |||| || |||||||||||||| ||||||| |||||||||||| Sbjct: 131 atagggaggcaagagagaacccggtgaactgaaacatctaagtagccggaggaaaagaaa 190 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 243 ||||||||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 191 gcaaaagcgattcccttagtagcggcgagcgaaaagggaacagcctaaacc 241 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 551 ctgaccgcgtgcctgttgaagaatgagccggcgact 586 |||||||||||||||||||||||||||||||||||| Sbjct: 895 ctgaccgcgtgcctgttgaagaatgagccggcgact 930
>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CelI gene Length = 3779 Score = 206 bits (104), Expect = 6e-50 Identities = 142/152 (93%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 409 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 468 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 469 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 528 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgt 514 || || || ||||||||||||| ||||||||| Sbjct: 529 cc-gtagg-agtgaaatagaacatgaaaccgt 558 Score = 123 bits (62), Expect = 7e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 162 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 221 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 tgaaacatcttagtagctggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 223 Query: 222 cgaaatgggagcagcctaaacc 243 |||| |||| ||||||||||| Sbjct: 224 cgaaccgggaacagcctaaacc 245 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 550 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 ||||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 585 tctgaccgcgtgcctgttgaagaatgagccggcgacttagaggaagtggc 634 Score = 56.0 bits (28), Expect = 1e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||| |||||||| || | || ||||| ||||||||||| || Sbjct: 11 cctaggcacccagagacgatgaagggcgcagataccggcgaaacgcttcggggagctggc 70 Query: 73 aataagcatagatccggagattcccaaataggtcaacct 111 || |||| | |||||| |||| ||| |||||| |||||| Sbjct: 71 aacaagctttgatccgaagatccccgaatagggcaacct 109
>gb|L42859.1|CRECPRGOL Chlamydomonas mutabilis chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmuI gene Length = 3744 Score = 206 bits (104), Expect = 6e-50 Identities = 207/238 (86%), Gaps = 10/238 (4%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||| |||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 436 cccgagtagcatggaacacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 495 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||| ||||||||||||||||||||| |||||| | || |||||||||||||| |||| Sbjct: 496 taaatattcctgggtgaccgatagcgaaatagtactgcgaaggaaaggtgaaaagtaccc 555 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagggg 540 || |||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 556 ccgttggggagtgaaatagaacatgaaaccgtttgctga-----caagcagtgggagggt 610 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 598 | | || | |||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 611 aca--gaac-ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtgg 665 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 158 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 217 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 216 Query: 218 cgagcgaaatgggagcagcctaaacc 243 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242 Score = 48.1 bits (24), Expect = 0.034 Identities = 47/55 (85%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 67 ||||||||||||| ||||| |||||||| || | || ||||| ||||||||||| Sbjct: 11 cctaggcacccagagacgaagaagggcgcagataccggcgaaacgcttcggggag 65
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 202 bits (102), Expect = 1e-48 Identities = 217/248 (87%), Gaps = 8/248 (3%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 442 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 501 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 481 |||||||||||||||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 502 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaatggttaaatagaacc 561 Query: 482 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 541 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 562 ccc-gtagg-agtgaaatagaacatgaaaccgttc---gctgacaagcagtgggagggg- 615 Query: 542 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 601 ||| | |||||||||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 616 gtttga-ccctgaccgcgtgcctgttgaagaatgagccggcgacttataagaagtggcca 674 Query: 602 ggttaagg 609 |||||||| Sbjct: 675 ggttaagg 682 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 143 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 202 ||||| ||||| || ||| |||||||||||||||||| |||||||||||||||||||||| Sbjct: 141 aagaggcaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaaagcga 200 Query: 203 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 244 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 201 ttcccggagtagcggcgagcgaaacgggaacagcctaaaccg 242
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 202 bits (102), Expect = 1e-48 Identities = 117/122 (95%) Strand = Plus / Plus Query: 362 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 421 ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 373 acccgagtagcatggggcacgtgaaatcccgtgtgaatccgcaaggaccaccttgcaagg 432 Query: 422 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 481 |||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 433 ctaaatactcctagatgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 492 Query: 482 cc 483 || Sbjct: 493 cc 494 Score = 159 bits (80), Expect = 1e-35 Identities = 98/104 (94%) Strand = Plus / Plus Query: 141 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagc 200 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 147 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaacgc 206 Query: 201 gattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 244 ||||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 207 gattcccttagtagcggcgagcgaagcgggaatagcctaaaccg 250 Score = 105 bits (53), Expect = 2e-19 Identities = 56/57 (98%) Strand = Plus / Plus Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 609 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 562 gaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 618 Score = 67.9 bits (34), Expect = 4e-08 Identities = 69/81 (85%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||||| | || ||||||||||||||| | | ||||||||||||||||||||||| | Sbjct: 31 cctaggcatctagagacgaggaagggcgtggttaccgacgaaatgcttcggggagttgga 90 Query: 73 aataagcatagatccggagat 93 || | || |||||||||||| Sbjct: 91 aagaggctgagatccggagat 111
>emb|X52737.1|CHCO23S Coleochaete orbicularis chloroplast DNA for transfer RNA-Ala, transfer RNA-Ile and 23S ribosomal RNA Length = 2305 Score = 202 bits (102), Expect = 1e-48 Identities = 135/146 (92%) Strand = Plus / Plus Query: 367 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 426 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 2152 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 2211 Query: 427 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 486 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2212 tactcctgggtgaccgatagcgaagaagtaccgtgagggaaaggtgaaaagaacccccat 2271 Query: 487 tgggtagtgaaatagaacgtgaaacc 512 ||| ||||||||||||| ||||||| Sbjct: 2272 aggggagtgaaatagaacatgaaacc 2297 Score = 190 bits (96), Expect = 4e-45 Identities = 212/251 (84%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||||| |||| ||||| ||||||||||| ||||||||||||||||||||||| || Sbjct: 1798 cctaggcatccagagacgaagaagggcgtagtaagcgacgaaatgcttcggggagctgcg 1857 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 || ||| ||| ||||| |||||||| |||||| ||||| || ||| |||| |||| Sbjct: 1858 aacaagtataaatccgaagattcccgaatagggtaacctcttgtactacctgtataatca 1917 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 || | |||| ||||| ||||| | ||||||||||||||||||||| ||||||| | ||| Sbjct: 1918 ataatcaggttagagaaaacctagtgaactgaaacatcttagtagctagaggaataaaaa 1977 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 252 ||||||||||||||| |||||| ||||||||||| |||| | ||||||||||| ||| || Sbjct: 1978 gcaaaagcgattcccttagtagtggcgagcgaaacgggaaccgcctaaaccgttaaagcg 2037 Query: 253 gggttgtggga 263 ||||||||||| Sbjct: 2038 gggttgtggga 2048
>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome Length = 161452 Score = 200 bits (101), Expect = 4e-48 Identities = 214/249 (85%), Gaps = 12/249 (4%) Strand = Plus / Minus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 155833 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 155774 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 481 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 155773 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 155714 Query: 482 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 155713 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 155657 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 || ||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 155656 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggca 155604 Query: 601 tggttaagg 609 |||||||| Sbjct: 155603 gggttaagg 155595 Score = 200 bits (101), Expect = 4e-48 Identities = 214/249 (85%), Gaps = 12/249 (4%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 78059 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 78118 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 481 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 78119 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 78178 Query: 482 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 78179 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 78235 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 || ||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 78236 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggca 78288 Query: 601 tggttaagg 609 |||||||| Sbjct: 78289 gggttaagg 78297 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Minus Query: 143 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 202 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 156138 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 156079 Query: 203 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 243 |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 156078 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 156038 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Plus Query: 143 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 202 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 77754 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 77813 Query: 203 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 243 |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 77814 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 77854 Score = 52.0 bits (26), Expect = 0.002 Identities = 85/105 (80%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||| ||| ||||| |||||||| || | || ||| | ||||||||||| || Sbjct: 156271 cctaggcactcagagacgatgaagggcgcagataccggcgatacgcttcggggagctggt 156212 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaa 117 || |||||| |||||| |||| ||| |||||| |||||| ||||| Sbjct: 156211 aacaagcatcgatccgaagatccccgaatagggcaacctcttaaa 156167 Score = 52.0 bits (26), Expect = 0.002 Identities = 85/105 (80%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||| ||| ||||| |||||||| || | || ||| | ||||||||||| || Sbjct: 77621 cctaggcactcagagacgatgaagggcgcagataccggcgatacgcttcggggagctggt 77680 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaa 117 || |||||| |||||| |||| ||| |||||| |||||| ||||| Sbjct: 77681 aacaagcatcgatccgaagatccccgaatagggcaacctcttaaa 77725
>gb|AF482503.1| Chlorokybus atmophyticus 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast genes for chloroplast products Length = 906 Score = 198 bits (100), Expect = 2e-47 Identities = 156/175 (89%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||| |||||||||| || |||||||| ||||||||||| |||| Sbjct: 732 cctaggcacccagagacgaagaagggcgtactaaccgacgaaacgcttcggggagctgaa 791 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 || |||||| ||||||||||||||| |||||| |||||| || |||| |||||||||| | Sbjct: 792 aagaagcattgatccggagattcccgaatagggcaacctcttgaacttcctgctgaattc 851 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 187 || ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 852 ataggcaggatagagacaacctggcgaactgaaacatcttagtagccagaggaaa 906
>gb|L42989.1|CRECPRGOLC Chlamydomonas humicola chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-ChuI gene Length = 4005 Score = 198 bits (100), Expect = 2e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 423 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 481 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 482 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 539 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 540 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 635 Query: 600 tt 601 || Sbjct: 636 tt 637 Score = 107 bits (54), Expect = 4e-20 Identities = 173/213 (81%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||| ||| ||||| |||||||| || | || ||||| |||||| |||| || Sbjct: 29 cctaggcactcagagacgatgaagggcgcagataccggcgaaacgcttcgaggagctggc 88 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 || |||| | |||||| |||| ||| |||||| |||||| | ||||| || | |||| | Sbjct: 89 aacaagctttgatccgaagatccccgaatagggcaacctgtaaaacttccaacagaattc 148 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 || | || ||||| ||||| | ||| ||||||||||||||||| |||||||||||| Sbjct: 149 atatgttggaaagaggcaacccagtgaattgaaacatcttagtagctggaggaaaagaaa 208 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaa 225 ||||| ||||||||||||||||||||||||||| Sbjct: 209 gcaaacgcgattcccgtagtagcggcgagcgaa 241
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 558 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 617 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 618 taaatactcctgggtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaacct 677 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgt 514 | | | ||||||||||||| ||||||||| Sbjct: 678 ctgaagaggagtgaaatagaacatgaaaccgt 709 Score = 131 bits (66), Expect = 3e-27 Identities = 78/82 (95%) Strand = Plus / Plus Query: 162 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 221 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 tgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 219 Query: 222 cgaaatgggagcagcctaaacc 243 |||| ||||| |||||||||| Sbjct: 220 cgaactgggactagcctaaacc 241 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 551 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 |||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 745 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 793 Score = 42.1 bits (21), Expect = 2.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcg 40 ||||||||||||| ||||| |||||||| Sbjct: 11 cctaggcacccagagacgatgaagggcg 38
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgt 514 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 158 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 217 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 218 cgagcgaaatgggagcagcctaaac 242 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629 Score = 56.0 bits (28), Expect = 1e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||| ||| ||||| |||||||| || | || ||| | ||||||||||| || Sbjct: 29 cctaggcactcagagacgaagaagggcgcagataccggcgatacgcttcggggagctggc 88 Query: 73 aataagcatagatccggagattcccaaataggtcaacct 111 || |||| | |||||| ||||||||||||||| |||||| Sbjct: 89 aacaagctttgatccgaagattcccaaatagggcaacct 127
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgt 514 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 158 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 217 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 218 cgagcgaaatgggagcagcctaaacc 243 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 609 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 692 Score = 56.0 bits (28), Expect = 1e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||| ||| ||||| |||||||| || | || ||| | ||||||||||| || Sbjct: 29 cctaggcactcagagacgaagaagggcgcagataccggcgatacgcttcggggagctggc 88 Query: 73 aataagcatagatccggagattcccaaataggtcaacct 111 || |||| | ||||||||||||||| |||||| |||||| Sbjct: 89 aacaagctttgatccggagattcccgaatagggcaacct 127
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 198 bits (100), Expect = 2e-47 Identities = 141/152 (92%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 412 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 471 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||| ||||||||||| ||| |||||||| |||||||||||||||||||||| Sbjct: 472 taaatactcctgagtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaagaaccc 531 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgt 514 || || || ||||||||||||| ||||||||| Sbjct: 532 cc-gtagg-agtgaaatagaacatgaaaccgt 561 Score = 123 bits (62), Expect = 7e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 162 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 221 ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaataaagcaaaagcgattcccgtagtagcggcgag 218 Query: 222 cgaaatgggagcagcctaaacc 243 ||||| |||| ||||||||||| Sbjct: 219 cgaaacgggaacagcctaaacc 240 Score = 75.8 bits (38), Expect = 2e-10 Identities = 54/58 (93%), Gaps = 1/58 (1%) Strand = Plus / Plus Query: 551 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 607 |||||||||||||||||||||||||||||||||||| | ||| |||||| |||||||| Sbjct: 593 ctgaccgcgtgcctgttgaagaatgagccggcgacttagaggaagtggcattggttaa 650
>gb|L42988.1|CRECPRGOLB Chlamydomonas applanata large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2863 Score = 198 bits (100), Expect = 2e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 384 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 443 Query: 423 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 481 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 444 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 503 Query: 482 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 539 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 504 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 558 Query: 540 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 559 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 616 Query: 600 tt 601 || Sbjct: 617 tt 618 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 162 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 221 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 218 Query: 222 cgaa 225 |||| Sbjct: 219 cgaa 222
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Minus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 151990 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 151931 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 151930 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 151871 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgt 514 | |||| ||||||||||||| ||||||||| Sbjct: 151870 ctgttggggagtgaaatagaacatgaaaccgt 151839 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 42213 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 42272 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 42273 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 42332 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgt 514 | |||| ||||||||||||| ||||||||| Sbjct: 42333 ctgttggggagtgaaatagaacatgaaaccgt 42364 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 158 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 217 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 152206 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 152147 Query: 218 cgagcgaaatgggagcagcctaaacc 243 |||||||| |||| ||||||||||| Sbjct: 152146 cgagcgaaccgggaacagcctaaacc 152121 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 158 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 217 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 41997 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 42056 Query: 218 cgagcgaaatgggagcagcctaaacc 243 |||||||| |||| ||||||||||| Sbjct: 42057 cgagcgaaccgggaacagcctaaacc 42082 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 609 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 151806 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 151749 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 609 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 42397 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 42454 Score = 48.1 bits (24), Expect = 0.034 Identities = 80/99 (80%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||| ||| ||||| |||||||| || | || ||| | ||||||||||| || Sbjct: 152352 cctaggcactcagagacgaagaagggcgcagataccggcgatacgcttcggggagctggc 152293 Query: 73 aataagcatagatccggagattcccaaataggtcaacct 111 || |||| | |||||| |||||||| |||||| |||||| Sbjct: 152292 aacaagctttgatccgaagattcccgaatagggcaacct 152254 Score = 48.1 bits (24), Expect = 0.034 Identities = 80/99 (80%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||| ||| ||||| |||||||| || | || ||| | ||||||||||| || Sbjct: 41851 cctaggcactcagagacgaagaagggcgcagataccggcgatacgcttcggggagctggc 41910 Query: 73 aataagcatagatccggagattcccaaataggtcaacct 111 || |||| | |||||| |||||||| |||||| |||||| Sbjct: 41911 aacaagctttgatccgaagattcccgaatagggcaacct 41949
>emb|X68921.1|CHCHRRNL1 Chloroplast Chlamydomonas humicola rrnL gene, exon 1 Length = 2524 Score = 198 bits (100), Expect = 2e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 423 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 481 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 482 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 539 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 540 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 635 Query: 600 tt 601 || Sbjct: 636 tt 637 Score = 107 bits (54), Expect = 4e-20 Identities = 173/213 (81%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||| ||| ||||| |||||||| || | || ||||| |||||| |||| || Sbjct: 29 cctaggcactcagagacgatgaagggcgcagataccggcgaaacgcttcgaggagctggc 88 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 || |||| | |||||| |||| ||| |||||| |||||| | ||||| || | |||| | Sbjct: 89 aacaagctttgatccgaagatccccgaatagggcaacctgtaaaacttccaacagaattc 148 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 || | || ||||| ||||| | ||| ||||||||||||||||| |||||||||||| Sbjct: 149 atatgttggaaagaggcaacccagtgaattgaaacatcttagtagctggaggaaaagaaa 208 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaa 225 ||||| ||||||||||||||||||||||||||| Sbjct: 209 gcaaacgcgattcccgtagtagcggcgagcgaa 241
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgt 514 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 158 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 217 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 218 cgagcgaaatgggagcagcctaaacc 243 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 609 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 692 Score = 56.0 bits (28), Expect = 1e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||| ||| ||||| |||||||| || | || ||| | ||||||||||| || Sbjct: 29 cctaggcactcagagacgaagaagggcgcagataccggcgatacgcttcggggagctggc 88 Query: 73 aataagcatagatccggagattcccaaataggtcaacct 111 || |||| | ||||||||||||||| |||||| |||||| Sbjct: 89 aacaagctttgatccggagattcccgaatagggcaacct 127
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgt 514 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 158 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 217 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 218 cgagcgaaatgggagcagcctaaac 242 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629 Score = 56.0 bits (28), Expect = 1e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||| ||| ||||| |||||||| || | || ||| | ||||||||||| || Sbjct: 29 cctaggcactcagagacgaagaagggcgcagataccggcgatacgcttcggggagctggc 88 Query: 73 aataagcatagatccggagattcccaaataggtcaacct 111 || |||| | |||||| ||||||||||||||| |||||| Sbjct: 89 aacaagctttgatccgaagattcccaaatagggcaacct 127
>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA Length = 2603 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 385 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 444 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 445 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 504 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgt 514 | |||| ||||||||||||| ||||||||| Sbjct: 505 ctgttggggagtgaaatagaacatgaaaccgt 536 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 158 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 217 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 169 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 228 Query: 218 cgagcgaaatgggagcagcctaaacc 243 |||||||| |||| ||||||||||| Sbjct: 229 cgagcgaaccgggaacagcctaaacc 254 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 609 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 569 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 626 Score = 48.1 bits (24), Expect = 0.034 Identities = 80/99 (80%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||| ||| ||||| |||||||| || | || ||| | ||||||||||| || Sbjct: 23 cctaggcactcagagacgaagaagggcgcagataccggcgatacgcttcggggagctggc 82 Query: 73 aataagcatagatccggagattcccaaataggtcaacct 111 || |||| | |||||| |||||||| |||||| |||||| Sbjct: 83 aacaagctttgatccgaagattcccgaatagggcaacct 121
>gb|J01398.1|CRECPRG23 c.reinhardtii (algae) chloroplast 3s, 7s & 23s(5') rrna gene Length = 814 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 470 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 529 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 530 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 589 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgt 514 | |||| ||||||||||||| ||||||||| Sbjct: 590 ctgttggggagtgaaatagaacatgaaaccgt 621 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 158 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 217 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 254 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 313 Query: 218 cgagcgaaatgggagcagcctaaacc 243 |||||||| |||| ||||||||||| Sbjct: 314 cgagcgaaccgggaacagcctaaacc 339 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 609 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 654 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 711 Score = 48.1 bits (24), Expect = 0.034 Identities = 80/99 (80%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||| ||| ||||| |||||||| || | || ||| | ||||||||||| || Sbjct: 108 cctaggcactcagagacgaagaagggcgcagataccggcgatacgcttcggggagctggc 167 Query: 73 aataagcatagatccggagattcccaaataggtcaacct 111 || |||| | |||||| |||||||| |||||| |||||| Sbjct: 168 aacaagctttgatccgaagattcccgaatagggcaacct 206
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 196 bits (99), Expect = 6e-47 Identities = 197/229 (86%), Gaps = 3/229 (1%) Strand = Plus / Plus Query: 366 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 425 ||||||||||||||||| |||||||| ||||||||||| |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgaggaatcccatgtgaatcagcgaggaccacctcgtaaggctaa 60 Query: 426 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 485 ||||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||||||| Sbjct: 61 atactactgtgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 486 gtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagt 545 ||| ||||||||||||| |||||||| | |||| |||||||||||||| | | Sbjct: 121 aaggggagtgaaatagaacatgaaaccg---ttagcttacaagcagtgggaggactattt 177 Query: 546 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 594 | ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 178 aaagtctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 483 ccagtgggtagtgaaatagaacgtgaaacc 512 | ||| ||||||||||||| ||||||| Sbjct: 491 ctgtaggggagtgaaatagaacatgaaacc 520 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 158 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 217 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 155 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 214 Query: 218 cgagcgaaatgggagcagcctaaacc 243 |||||||||||||| | ||||||||| Sbjct: 215 cgagcgaaatgggaacggcctaaacc 240 Score = 95.6 bits (48), Expect = 2e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||| ||||||||| | || |||||||| ||||||||||| || | Sbjct: 10 cctaggcacccagagacgatgaagggcgtggaaaccgacgaaacgcttcggggagctgga 69 Query: 73 aataagcatagatccggagattcccaaataggtcaacct 111 || ||||| ||||||||||||||| |||||| |||||| Sbjct: 70 aacaagcaatgatccggagattcccgaatagggcaacct 108 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 551 ctgaccgcgtgcctgttgaagaatgagccggcgact 586 |||||||||||||||||||||||||||||||||||| Sbjct: 554 ctgaccgcgtgcctgttgaagaatgagccggcgact 589
>dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0490D09 Length = 154430 Score = 194 bits (98), Expect = 2e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 471 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 530 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 107567 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 107508 Query: 531 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 580 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107507 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 107458
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 25180 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 25239 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 25240 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 25299 Query: 483 ccagtgggtagtgaaatagaacgtgaaacc 512 | ||| ||||||||||||| ||||||| Sbjct: 25300 ctgtaggggagtgaaatagaacatgaaacc 25329 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 158 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 217 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 24964 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 25023 Query: 218 cgagcgaaatgggagcagcctaaacc 243 |||||||||||||| ||||||||||| Sbjct: 25024 cgagcgaaatgggaacagcctaaacc 25049 Score = 79.8 bits (40), Expect = 1e-11 Identities = 85/99 (85%), Gaps = 1/99 (1%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||||||| || ||||| ||||||||| | || |||||||| ||||||||||| || | Sbjct: 24820 cctaggcacctagagacgatgaagggcgtgg-aaccgacgaaacgcttcggggagctgga 24878 Query: 73 aataagcatagatccggagattcccaaataggtcaacct 111 || ||||| ||||||||||||||| |||||| |||||| Sbjct: 24879 aacaagcaatgatccggagattcccgaatagggcaacct 24917 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 551 ctgaccgcgtgcctgttgaagaatgagccggcgact 586 |||||||||||||||||||||||||||||||||||| Sbjct: 25363 ctgaccgcgtgcctgttgaagaatgagccggcgact 25398
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 192 bits (97), Expect = 9e-46 Identities = 136/149 (91%) Strand = Plus / Plus Query: 366 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 425 ||||||||||||||||||| |||||||||||||||| | |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgtgaaatcccgtgtgaatcatcgaggaccacctcgaaaggctaa 60 Query: 426 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 485 ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 61 atactcctgtgtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 486 gtgggtagtgaaatagaacgtgaaaccgt 514 | ||| ||||||||||||| ||||||||| Sbjct: 121 gaggggagtgaaatagaacatgaaaccgt 149 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 559 gtgcctgttgaagaatgagccggcgactcatagg 592 |||||||||||||||||||||||||||| ||||| Sbjct: 191 gtgcctgttgaagaatgagccggcgacttatagg 224
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 192 bits (97), Expect = 9e-46 Identities = 196/225 (87%), Gaps = 8/225 (3%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 506 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 565 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 481 |||||||| ||| ||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 566 taaatactactgagtgaccgatagcgaaatagtaccgcgagggaacggttaaatagaacc 625 Query: 482 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 541 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 626 ccc-gtagggagtgaaatagaacatgaaaccgttc---gctgacaagcagtgggaggggt 681 Query: 542 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 586 || | |||||||||||||||||||||||||||||||||||| Sbjct: 682 tag---accctgaccgcgtgcctgttgaagaatgagccggcgact 723 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 143 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 202 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 140 aagaggcaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaagcga 199 Query: 203 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 244 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 200 ttcccggagtagcggcgagcgaaaagggaacagcctaaaccg 241
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 ||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 aaaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgt 514 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 158 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 217 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 216 Query: 218 cgagcgaaatgggagcagcctaaacc 243 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 609 ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 578 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggccgggttaagg 635 Score = 56.0 bits (28), Expect = 1e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||| ||| ||||| |||||||| || | || ||| | ||||||||||| || Sbjct: 11 cctaggcactcagagacgaagaagggcgcagataccggcgatacgcttcggggagctggc 70 Query: 73 aataagcatagatccggagattcccaaataggtcaacct 111 || |||| | ||||||||||||||| |||||| |||||| Sbjct: 71 aacaagctttgatccggagattcccgaatagggcaacct 109
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 190 bits (96), Expect = 4e-45 Identities = 213/248 (85%), Gaps = 8/248 (3%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 567 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 626 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||||||||||||||| | | ||||||| ||||||| ||||| |||||||| Sbjct: 627 taaatactcctgggtgaccgatagtgcaa-agtaccgcgagggaatggtgataagaaccc 685 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 542 | ||| ||||||||||||| |||||||| | |||| ||||||||||||| | Sbjct: 686 ctgtaggggagtgaaatagaacatgaaaccg---taagctgacaagcagtgggagc---a 739 Query: 543 agtgatctc-tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 601 ||| | || ||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 740 agttaacttgtgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcaa 799 Query: 602 ggttaagg 609 |||||||| Sbjct: 800 ggttaagg 807 Score = 119 bits (60), Expect = 1e-23 Identities = 90/100 (90%) Strand = Plus / Plus Query: 144 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 203 |||||||||| | ||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 140 agagacaacccagtgaattgaaacatcttagtagctggaggaaaagaaagcaaacgcgat 199 Query: 204 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 243 |||||||||||||||||||||| |||| ||||||||||| Sbjct: 200 tcccgtagtagcggcgagcgaaccgggatcagcctaaacc 239
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 402 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 461 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 462 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 521 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgt 514 | |||| ||||||||||||| ||||||||| Sbjct: 522 ctgttggggagtgaaatagaacatgaaaccgt 553 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 158 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 217 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 218 cgagcgaaatgggagcagcctaaacc 243 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 610 |||| |||||||||||||||||||||||||||||| ||||| ||||||| ||||||||| Sbjct: 586 tgactgcgtgcctgttgaagaatgagccggcgacttataggaagtggctaggttaaggg 644 Score = 48.1 bits (24), Expect = 0.034 Identities = 80/99 (80%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||| ||| ||||| |||||||| || | || ||| | ||||||||||| || Sbjct: 29 cctaggcactcagagacgaagaagggcgcagataccggcgatacgcttcggggagctggc 88 Query: 73 aataagcatagatccggagattcccaaataggtcaacct 111 || |||| | |||||| |||||||| |||||| |||||| Sbjct: 89 aacaagctttgatccgaagattcccgaatagggcaacct 127
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Minus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 171123 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 171064 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 171063 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 171004 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 538 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 171003 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 170951 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 121803 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 121862 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 121863 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 121922 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 538 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 121923 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 121975 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Minus Query: 144 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 203 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 171357 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 171298 Query: 204 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 244 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 171297 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 171257 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 144 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 203 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 121569 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 121628 Query: 204 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 244 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 121629 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 121669 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Minus Query: 551 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 609 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 170941 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggttaagg 170883 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 551 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 609 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 121985 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggttaagg 122043 Score = 79.8 bits (40), Expect = 1e-11 Identities = 84/99 (84%) Strand = Plus / Minus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||| |||||||||||||| |||||||| || ||||||| || | Sbjct: 171488 cctaggcacccagagacgaagaagggcgtagcaaccgacgaaaccctccggggagctgga 171429 Query: 73 aataagcatagatccggagattcccaaataggtcaacct 111 | |||| ||||||||||||||| |||||| |||||| Sbjct: 171428 agcaagctctgatccggagattcccgaatagggcaacct 171390 Score = 79.8 bits (40), Expect = 1e-11 Identities = 84/99 (84%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||| |||||||||||||| |||||||| || ||||||| || | Sbjct: 121438 cctaggcacccagagacgaagaagggcgtagcaaccgacgaaaccctccggggagctgga 121497 Query: 73 aataagcatagatccggagattcccaaataggtcaacct 111 | |||| ||||||||||||||| |||||| |||||| Sbjct: 121498 agcaagctctgatccggagattcccgaatagggcaacct 121536
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 453 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 454 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 513 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 538 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 514 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 566 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 144 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 203 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 160 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 219 Query: 204 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 244 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 220 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 260 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 551 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 609 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 576 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggttaagg 634 Score = 79.8 bits (40), Expect = 1e-11 Identities = 84/99 (84%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||| |||||||||||||| |||||||| || ||||||| || | Sbjct: 29 cctaggcacccagagacgaagaagggcgtagcaaccgacgaaaccctccggggagctgga 88 Query: 73 aataagcatagatccggagattcccaaataggtcaacct 111 | |||| ||||||||||||||| |||||| |||||| Sbjct: 89 agcaagctctgatccggagattcccgaatagggcaacct 127
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 184 bits (93), Expect = 2e-43 Identities = 199/232 (85%), Gaps = 2/232 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||| ||| ||||| ||||||||| | || | |||||||||||||||||| || | Sbjct: 18 cctaggcactcagagacgaagaagggcgtggaaaccaacgaaatgcttcggggagctgga 77 Query: 73 aataagc-atagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 131 || |||| ||| |||||||||||||| |||||| |||||| || ||| ||| ||||| Sbjct: 78 aacaagctata-atccggagattcccgaatagggcaacctcttgtactacctattgaatt 136 Query: 132 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 191 ||| ||| ||||||||||| || ||| |||||||||||||||||| ||||||||||| Sbjct: 137 catagataggaaagagacaacccggtgaattgaaacatcttagtagccggaggaaaagaa 196 Query: 192 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 243 |||||| ||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 197 agcaaacgcgattcccttagtagcggcgagcgaaatgggaacagcctaaacc 248 Score = 153 bits (77), Expect = 8e-34 Identities = 135/153 (88%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||||||| |||||| |||||||||||||||| | |||||||||| | ||||| Sbjct: 377 cccgagtagcatgggacacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaaggc 436 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacc 481 |||||||||||| |||||| |||||||| |||||||| |||||||||||| ||||||||| Sbjct: 437 taaatactcctgagtgaccaatagcgaaatagtaccgcgagggaaaggtgaaaaagaacc 496 Query: 482 cccagtgggtagtgaaatagaacgtgaaaccgt 514 || ||| ||||||| ||||| ||||||||| Sbjct: 497 cctgtaggggagtgaaaaagaacatgaaaccgt 529 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 609 ||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 566 tgaccgcgttcctgttgaagaatgagccggcgacttatagaaagtggcttggttaagg 623
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 184 bits (93), Expect = 2e-43 Identities = 139/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||||| Sbjct: 446 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaaggc 505 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacc 481 |||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| || Sbjct: 506 taaatactcctgagtgaccgatagcgaactagtaccgtgagggaaaggtgaaaaagatcc 565 Query: 482 cccagtgggtagtgaaatagaacgtgaaaccgt 514 ||| ||| ||||||||||||| ||||||||| Sbjct: 566 cccgtagggaagtgaaatagaacatgaaaccgt 598 Score = 147 bits (74), Expect = 5e-32 Identities = 195/233 (83%), Gaps = 2/233 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||| ||| ||||| ||||||||| | || |||||||| ||||||||||| || | Sbjct: 18 cctaggcactcagagacgatgaagggcgtggtaaccgacgaaacgcttcggggagctgga 77 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 | ||| | |||||| |||||||| |||||| |||||| || ||| | | ||||| | Sbjct: 78 tacgagctttgatccgaagattcccgaatagggcaacctcttggactccttagtgaattc 137 Query: 133 atgagc-aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 191 || ||| | | |||||| |||| || ||| ||||||||||||||| || ||||||||||| Sbjct: 138 at-agctaagaaagagataacccggtgaattgaaacatcttagtaaccggaggaaaagaa 196 Query: 192 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 244 |||||| ||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 197 agcaaacgcgattcccttagtagcggcgagcgaaatgggaacagcctaaaccg 249 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 551 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 609 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 629 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaaaagtggcttggttaagg 687
>gb|L42984.1|ANKCPRGOL Ankistrodesmus stipitatus chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-AstI gene Length = 4859 Score = 182 bits (92), Expect = 9e-43 Identities = 203/234 (86%), Gaps = 12/234 (5%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||||||||||||||||||| || |||||||||| | ||||| Sbjct: 383 cccgagtagcatggggcacgtggaatcccgtgtgaatctgcgaggaccacctcgtaaggc 442 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 481 ||||||||| | |||||||||||||||| |||||| |||| |||||| ||||| |||||| Sbjct: 443 taaatactcttaggtgaccgatagcgaaatagtacagtgatggaaagttgaaagagaacc 502 Query: 482 ccc-agtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagg 538 ||| ||| ||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 503 cccttaaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggagg 557 Query: 539 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 592 | ||| || |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 558 gtttagt--tc-ctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 608 Score = 119 bits (60), Expect = 1e-23 Identities = 189/231 (81%), Gaps = 1/231 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||||||| | ||||| |||||||| || | || ||||| ||||||||||| || Sbjct: 11 cctaggcacctaaagacgatgaagggcgcagataccggcgaaacgcttcggggagctggc 70 Query: 73 aataagcatagatccggagattcccaaataggtcaacctttta-aactgcctgctgaatc 131 || |||||| |||||| |||| ||| |||||| |||||| ||| ||||||| |||||| Sbjct: 71 aacaagcatcgatccgaagatccccgaatagggcaacctcttagaactgcccactgaatt 130 Query: 132 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 191 ||| | || |||| |||| ||||| ||||||||||||||||| |||||||||| Sbjct: 131 cataggtgggtcagaggcaactcagcgaattgaaacatcttagtagctgaaggaaaagaa 190 Query: 192 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 242 |||||||||||||||| |||||||||||||| ||||||| |||||||||| Sbjct: 191 agcaaaagcgattcccaaagtagcggcgagcggaatgggaacagcctaaac 241
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 182 bits (92), Expect = 9e-43 Identities = 137/152 (90%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||| | Sbjct: 371 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaagac 430 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgt 514 ||| ||| ||||||||||| | ||||||||| Sbjct: 491 ccataggggagtgaaatagatcatgaaaccgt 522 Score = 161 bits (81), Expect = 3e-36 Identities = 194/232 (83%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||| || ||| | ||| ||||||||||| | |||||| | ||||||||||| || | Sbjct: 18 cctagggactcagagtcgatgaagggcgtagttaccgacgatacgcttcggggagctgga 77 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 | |||| | |||||| |||||||| |||||| ||||||| || ||| |||| ||||| | Sbjct: 78 atcaagctttgatccgaagattcccgaatagggcaaccttatatacttcctgttgaattc 137 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 || |||| ||||||||||| |||||| |||||||||||||||||| | |||||||||| Sbjct: 138 atagacaggtaagagacaacccggcgaattgaaacatcttagtagccggtggaaaagaaa 197 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 244 ||||| ||||||||| |||||| ||||||||||| |||| ||| |||||||| Sbjct: 198 gcaaacgcgattcccttagtagtggcgagcgaaaagggatcagtctaaaccg 249 Score = 111 bits (56), Expect = 3e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 550 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 609 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 556 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 615
>gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4181 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 483 ccagtgggtagtgaaatagaacgtgaaacc 512 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 103 bits (52), Expect = 7e-19 Identities = 186/231 (80%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||| ||| ||||| |||||||| || | || ||| | ||||||||||| || Sbjct: 29 cctaggcactcagagacgatgaagggcgcagataccggcgatacgcttcggggagctggc 88 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 || |||| | ||||||||||||||| |||||| |||||| | ||||| ||| ||| | Sbjct: 89 aacaagctttgatccggagattcccgaatagggcaacctataaaactacctatataattc 148 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 || ||| ||||| ||||| | |||||||||||||| |||||| |||||||||||| Sbjct: 149 atagttaggaaagaggcaacccagtgaactgaaacatctaagtagctggaggaaaagaaa 208 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 243 ||||| |||||||||||||||| ||||| |||| |||| |||||||||| Sbjct: 209 gcaaacgcgattcccgtagtagtggcgaacgaaccgggattagcctaaacc 259 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 551 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 609 |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 640
>gb|DQ313084.1| Uncultured bacterium clone 3R3F 23S ribosomal RNA gene, partial sequence Length = 629 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||||||| |||| | |||||||||||||||||| |||||||||| | ||||| Sbjct: 243 cccgagtagcatgggacacgagaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 302 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 ||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 303 taaatactcttaggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 362 Query: 483 ccagtgggtagtgaaatagaacgtgaaacc 512 | ||| ||||||||||||| ||||||| Sbjct: 363 ctgtaggggagtgaaatagaacatgaaacc 392 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 158 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 217 ||||||||||||||||||||| ||||| |||||||||| |||||||||| ||||| || Sbjct: 8 gaactgaaacatcttagtagctgaaggaagagaaagcaaacgcgattcccggagtagtgg 67 Query: 218 cgagcgaaatgggagcagcctaaacc 243 |||||||||||||| ||||||||||| Sbjct: 68 cgagcgaaatgggaacagcctaaacc 93 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 551 ctgaccgcgtgcctgttgaagaatgagccggcgact 586 |||||||||| |||||||||||||| |||||||||| Sbjct: 426 ctgaccgcgtacctgttgaagaatgggccggcgact 461
>emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL gene, exon 1 Length = 1965 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 483 ccagtgggtagtgaaatagaacgtgaaacc 512 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 103 bits (52), Expect = 7e-19 Identities = 186/231 (80%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||| ||| ||||| |||||||| || | || ||| | ||||||||||| || Sbjct: 29 cctaggcactcagagacgatgaagggcgcagataccggcgatacgcttcggggagctggc 88 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 || |||| | ||||||||||||||| |||||| |||||| | ||||| ||| ||| | Sbjct: 89 aacaagctttgatccggagattcccgaatagggcaacctataaaactacctatataattc 148 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 || ||| ||||| ||||| | |||||||||||||| |||||| |||||||||||| Sbjct: 149 atagttaggaaagaggcaacccagtgaactgaaacatctaagtagctggaggaaaagaaa 208 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 243 ||||| |||||||||||||||| ||||| |||| |||| |||||||||| Sbjct: 209 gcaaacgcgattcccgtagtagtggcgaacgaaccgggattagcctaaacc 259 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 551 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 609 |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 640
>gb|M36158.1|CHLCPG C.ellipsoidea chloroplast 23S ribosomal RNA gene, complete sequence Length = 3359 Score = 178 bits (90), Expect = 1e-41 Identities = 210/246 (85%), Gaps = 8/246 (3%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||| |||||||||| |||||||||||||| ||| |||||||||| | ||||| Sbjct: 498 cccgagtagctaggggcacgtgaaatcccgtgtgaatgagcgaggaccacctcgtaaggc 557 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 ||||||||||| |||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 558 taaatactcctaggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 617 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg-ga 541 | ||| ||||||| ||||| |||||||| | |||| ||||||||||||||| || Sbjct: 618 ctgtaggggagtgaaacagaacatgaaaccg---taagctgtcaagcagtgggagggcga 674 Query: 542 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 601 || | | |||||||||||||||||||||||||||||||||||| ||||| |||||| | Sbjct: 675 aa---agc-ctgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggcgt 730 Query: 602 ggttaa 607 |||||| Sbjct: 731 ggttaa 736 Score = 127 bits (64), Expect = 5e-26 Identities = 190/231 (82%), Gaps = 1/231 (0%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 |||||||| | || ||||| ||||||||| | || | ||||||||||||| |||| || | Sbjct: 131 cctaggcatctagagacgatgaagggcgtggaaaccaacgaaatgcttcgaggagctgga 190 Query: 73 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 132 || |||| ||| ||||||||||| |||||| |||||||||| ||| ||| ||||| | Sbjct: 191 aacaagctatgattcggagattcccgaatagggcaaccttttatactacctattgaattc 250 Query: 133 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 192 || ||| ||||||||||| | ||| |||||||||||||||| |||||||||||| Sbjct: 251 atagataggaaagagacaacccagtgaag-gaaacatcttagtagctggaggaaaagaaa 309 Query: 193 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 243 ||||| ||||||||| ||||||||||||||||||| | ||||||||||| Sbjct: 310 gcaaacgcgattcccttagtagcggcgagcgaaatcccaacagcctaaacc 360
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 176 bits (89), Expect = 6e-41 Identities = 134/149 (89%) Strand = Plus / Plus Query: 366 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 425 ||||||||||||||| ||| |||||| ||||||||||| || |||| || | |||||||| Sbjct: 1 gagtagcatggggcaggtgaaatcccatgtgaatcagcgagaaccatctcgtaaggctaa 60 Query: 426 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 485 ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 61 atactcctgtgtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaaccccga 120 Query: 486 gtgggtagtgaaatagaacgtgaaaccgt 514 ||| ||||||||||||| ||||||||| Sbjct: 121 aaggggagtgaaatagaacatgaaaccgt 149 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 550 tctgaccgcgtgcctgttgaagaatgagccggcga 584 |||||||| |||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcga 216
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 176 bits (89), Expect = 6e-41 Identities = 138/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 527 cccgagtagcatggggcacgtgaaatcccgtgtgaatccacgaggaccacctcgtaaggc 586 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||||||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 587 taaatactcctgggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 646 Query: 483 ccagt-gggtagtgaaatagaacgtgaaaccgt 514 ||||| ||| ||||||||||||| ||||||||| Sbjct: 647 ccagtcggggagtgaaatagaacatgaaaccgt 679 Score = 147 bits (74), Expect = 5e-32 Identities = 95/102 (93%) Strand = Plus / Plus Query: 143 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 202 ||||||||||| || ||| |||||||||||||||||| ||||||||||||||||| |||| Sbjct: 148 aagagacaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcga 207 Query: 203 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 244 ||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 208 ttcccgtagtagcggcgagcgaactgggaacagcctaaaccg 249 Score = 75.8 bits (38), Expect = 2e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 609 ||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 714 tgaccgcatgcctgttgaagaatgagccggcgacttataaagagtggcttggttaagg 771 Score = 71.9 bits (36), Expect = 2e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 13 cctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 72 ||||||||||||| ||||| ||||||||| | || |||||||| |||||||| || || | Sbjct: 18 cctaggcacccagagacgaagaagggcgtggaaaccgacgaaacgcttcgggaagctgga 77 Query: 73 aataagcatagatccggagattcccaaataggtcaacct 111 || |||| |||||| |||||||| |||||| |||||| Sbjct: 78 aacaagctatgatccgaagattcccgaatagggcaacct 116
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgtg 515 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 156 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 215 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 216 ggcgagcgaaatgggagcagcctaaacc 243 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 592 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgtg 515 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 156 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 215 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 216 ggcgagcgaaatgggagcagcctaaacc 243 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 592 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgtg 515 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 159 aactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggc 218 |||||||||||||||||||| ||||||| ||||| |||| ||| |||| ||||||||| Sbjct: 22 aactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagcggc 81 Query: 219 gagcgaaatgggagcagcctaaacc 243 ||||||| |||| |||||||||| Sbjct: 82 gagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgtg 515 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 156 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 215 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 216 ggcgagcgaaatgggagcagcctaaacc 243 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgtg 515 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 156 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 215 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 216 ggcgagcgaaatgggagcagcctaaacc 243 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 592 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgtg 515 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 156 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 215 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 216 ggcgagcgaaatgggagcagcctaaacc 243 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgtg 515 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 156 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 215 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 216 ggcgagcgaaatgggagcagcctaaacc 243 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,178,297 Number of Sequences: 3902068 Number of extensions: 4178297 Number of successful extensions: 122241 Number of sequences better than 10.0: 26619 Number of HSP's better than 10.0 without gapping: 26447 Number of HSP's successfully gapped in prelim test: 207 Number of HSP's that attempted gapping in prelim test: 77914 Number of HSP's gapped (non-prelim): 42354 length of query: 616 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 593 effective length of database: 17,143,297,704 effective search space: 10165975538472 effective search space used: 10165975538472 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
