ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd26m07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1114 bits (562), Expect = 0.0 Identities = 576/580 (99%), Gaps = 1/580 (0%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120042 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 119984 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119983 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 119924 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119923 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 119864 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119863 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 119804 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119803 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 119744 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 119743 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 119684 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119683 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 119624 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119623 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 119564 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119563 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 119504 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||| Sbjct: 119503 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 119464 Score = 1114 bits (562), Expect = 0.0 Identities = 576/580 (99%), Gaps = 1/580 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94852 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 94910 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94911 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 94970 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94971 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 95030 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95031 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 95090 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95091 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 95150 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 95151 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 95210 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95211 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 95270 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95271 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 95330 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95331 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 95390 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||| Sbjct: 95391 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 95430
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 1106 bits (558), Expect = 0.0 Identities = 575/580 (99%), Gaps = 1/580 (0%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 953 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 895 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 894 aaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatc 835 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 834 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 775 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 774 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 715 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 714 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 655 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 654 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 595 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 594 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 535 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 534 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 475 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 474 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 415 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||| Sbjct: 414 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 375
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1106 bits (558), Expect = 0.0 Identities = 575/580 (99%), Gaps = 1/580 (0%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44867 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 44809 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 44808 aaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatc 44749 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44748 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 44689 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44688 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 44629 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44628 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 44569 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 44568 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 44509 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44508 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 44449 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44448 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 44389 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44388 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 44329 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||| Sbjct: 44328 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 44289 Score = 1106 bits (558), Expect = 0.0 Identities = 575/580 (99%), Gaps = 1/580 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20251 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 20309 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 20310 aaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatc 20369 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20370 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 20429 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20430 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 20489 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20490 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 20549 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 20550 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 20609 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20610 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 20669 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20670 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 20729 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20730 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 20789 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||| Sbjct: 20790 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 20829
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1106 bits (558), Expect = 0.0 Identities = 575/580 (99%), Gaps = 1/580 (0%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1496 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 1438 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1437 aaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatc 1378 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1377 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 1318 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1317 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 1258 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1257 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 1198 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1197 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 1138 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1137 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 1078 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1077 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 1018 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1017 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 958 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||| Sbjct: 957 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 918
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1106 bits (558), Expect = 0.0 Identities = 575/580 (99%), Gaps = 1/580 (0%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123706 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 123648 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 123647 aaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatc 123588 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123587 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 123528 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123527 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 123468 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123467 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 123408 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 123407 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 123348 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123347 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 123288 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123287 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 123228 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123227 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 123168 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||| Sbjct: 123167 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 123128 Score = 1106 bits (558), Expect = 0.0 Identities = 575/580 (99%), Gaps = 1/580 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99131 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 99189 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 99190 aaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatc 99249 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99250 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 99309 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99310 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 99369 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99370 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 99429 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 99430 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 99489 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99490 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 99549 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99550 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 99609 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99610 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 99669 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||| Sbjct: 99670 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 99709
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1106 bits (558), Expect = 0.0 Identities = 575/580 (99%), Gaps = 1/580 (0%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124423 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 124365 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 124364 aaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatc 124305 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124304 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 124245 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124244 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 124185 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124184 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 124125 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 124124 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 124065 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124064 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 124005 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124004 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 123945 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123944 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 123885 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||| Sbjct: 123884 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 123845 Score = 1106 bits (558), Expect = 0.0 Identities = 575/580 (99%), Gaps = 1/580 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99808 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 99866 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 99867 aaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatc 99926 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99927 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 99986 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99987 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 100046 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100047 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 100106 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 100107 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 100166 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100167 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 100226 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100227 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 100286 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100287 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 100346 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||| Sbjct: 100347 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 100386
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1102 bits (556), Expect = 0.0 Identities = 562/564 (99%) Strand = Plus / Minus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118808 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 118749 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 118748 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 118689 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118688 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 118629 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118628 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 118569 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118568 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 118509 Query: 318 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 377 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 118508 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 118449 Query: 378 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118448 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 118389 Query: 438 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118388 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 118329 Query: 498 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118328 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 118269 Query: 558 gaagaatgagccggcgactcatag 581 |||||||||||||||||||||||| Sbjct: 118268 gaagaatgagccggcgactcatag 118245
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1102 bits (556), Expect = 0.0 Identities = 562/564 (99%) Strand = Plus / Minus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119892 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 119833 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119832 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 119773 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119772 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 119713 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119712 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 119653 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119652 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 119593 Query: 318 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 377 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119592 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 119533 Query: 378 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119532 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 119473 Query: 438 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119472 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 119413 Query: 498 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119412 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 119353 Query: 558 gaagaatgagccggcgactcatag 581 |||||||||||||||||||||||| Sbjct: 119352 gaagaatgagccggcgactcatag 119329 Score = 1102 bits (556), Expect = 0.0 Identities = 562/564 (99%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95264 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 95323 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95324 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 95383 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95384 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 95443 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95444 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 95503 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95504 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 95563 Query: 318 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 377 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95564 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 95623 Query: 378 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95624 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 95683 Query: 438 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95684 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 95743 Query: 498 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95744 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 95803 Query: 558 gaagaatgagccggcgactcatag 581 |||||||||||||||||||||||| Sbjct: 95804 gaagaatgagccggcgactcatag 95827
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1102 bits (556), Expect = 0.0 Identities = 562/564 (99%) Strand = Plus / Minus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119892 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 119833 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119832 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 119773 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119772 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 119713 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119712 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 119653 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119652 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 119593 Query: 318 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 377 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119592 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 119533 Query: 378 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119532 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 119473 Query: 438 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119472 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 119413 Query: 498 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119412 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 119353 Query: 558 gaagaatgagccggcgactcatag 581 |||||||||||||||||||||||| Sbjct: 119352 gaagaatgagccggcgactcatag 119329 Score = 1102 bits (556), Expect = 0.0 Identities = 562/564 (99%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95264 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 95323 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95324 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 95383 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95384 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 95443 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95444 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 95503 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95504 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 95563 Query: 318 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 377 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95564 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 95623 Query: 378 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95624 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 95683 Query: 438 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95684 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 95743 Query: 498 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95744 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 95803 Query: 558 gaagaatgagccggcgactcatag 581 |||||||||||||||||||||||| Sbjct: 95804 gaagaatgagccggcgactcatag 95827
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1102 bits (556), Expect = 0.0 Identities = 562/564 (99%) Strand = Plus / Minus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119841 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 119782 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119781 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 119722 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119721 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 119662 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119661 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 119602 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119601 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 119542 Query: 318 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 377 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119541 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 119482 Query: 378 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119481 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 119422 Query: 438 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119421 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 119362 Query: 498 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119361 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 119302 Query: 558 gaagaatgagccggcgactcatag 581 |||||||||||||||||||||||| Sbjct: 119301 gaagaatgagccggcgactcatag 119278 Score = 1102 bits (556), Expect = 0.0 Identities = 562/564 (99%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95209 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 95268 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95269 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 95328 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95329 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 95388 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95389 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 95448 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95449 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 95508 Query: 318 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 377 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95509 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 95568 Query: 378 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95569 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 95628 Query: 438 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95629 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 95688 Query: 498 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95689 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 95748 Query: 558 gaagaatgagccggcgactcatag 581 |||||||||||||||||||||||| Sbjct: 95749 gaagaatgagccggcgactcatag 95772
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1102 bits (556), Expect = 0.0 Identities = 562/564 (99%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507842 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 31507901 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 31507902 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 31507961 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507962 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 31508021 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508022 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 31508081 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508082 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 31508141 Query: 318 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 377 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 31508142 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 31508201 Query: 378 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508202 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 31508261 Query: 438 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508262 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 31508321 Query: 498 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508322 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 31508381 Query: 558 gaagaatgagccggcgactcatag 581 |||||||||||||||||||||||| Sbjct: 31508382 gaagaatgagccggcgactcatag 31508405
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1102 bits (556), Expect = 0.0 Identities = 562/564 (99%) Strand = Plus / Minus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84754 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 84695 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 84694 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 84635 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84634 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 84575 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84574 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 84515 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84514 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 84455 Query: 318 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 377 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 84454 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 84395 Query: 378 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84394 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 84335 Query: 438 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84334 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 84275 Query: 498 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84274 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 84215 Query: 558 gaagaatgagccggcgactcatag 581 |||||||||||||||||||||||| Sbjct: 84214 gaagaatgagccggcgactcatag 84191
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1102 bits (556), Expect = 0.0 Identities = 562/564 (99%) Strand = Plus / Minus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119861 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 119802 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119801 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 119742 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119741 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 119682 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119681 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 119622 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119621 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 119562 Query: 318 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 377 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119561 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 119502 Query: 378 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119501 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 119442 Query: 438 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119441 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 119382 Query: 498 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119381 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 119322 Query: 558 gaagaatgagccggcgactcatag 581 |||||||||||||||||||||||| Sbjct: 119321 gaagaatgagccggcgactcatag 119298 Score = 1102 bits (556), Expect = 0.0 Identities = 562/564 (99%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95257 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 95316 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95317 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 95376 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95377 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 95436 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95437 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 95496 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95497 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 95556 Query: 318 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 377 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95557 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 95616 Query: 378 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95617 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 95676 Query: 438 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95677 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 95736 Query: 498 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95737 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 95796 Query: 558 gaagaatgagccggcgactcatag 581 |||||||||||||||||||||||| Sbjct: 95797 gaagaatgagccggcgactcatag 95820
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1102 bits (556), Expect = 0.0 Identities = 562/564 (99%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122306 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 122365 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 122366 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 122425 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122426 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 122485 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122486 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 122545 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122546 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 122605 Query: 318 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 377 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 122606 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 122665 Query: 378 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122666 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 122725 Query: 438 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122726 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 122785 Query: 498 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122786 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 122845 Query: 558 gaagaatgagccggcgactcatag 581 |||||||||||||||||||||||| Sbjct: 122846 gaagaatgagccggcgactcatag 122869 Score = 1094 bits (552), Expect = 0.0 Identities = 561/564 (99%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14031 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 14090 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 14091 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 14150 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14151 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 14210 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14211 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 14270 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14271 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 14330 Query: 318 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 377 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 14331 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 14390 Query: 378 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 437 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14391 tcctgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 14450 Query: 438 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14451 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 14510 Query: 498 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14511 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 14570 Query: 558 gaagaatgagccggcgactcatag 581 |||||||||||||||||||||||| Sbjct: 14571 gaagaatgagccggcgactcatag 14594
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1102 bits (556), Expect = 0.0 Identities = 562/564 (99%) Strand = Plus / Minus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58580 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 58521 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 58520 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 58461 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58460 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 58401 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58400 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 58341 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58340 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 58281 Query: 318 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 377 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 58280 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 58221 Query: 378 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58220 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 58161 Query: 438 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58160 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 58101 Query: 498 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58100 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 58041 Query: 558 gaagaatgagccggcgactcatag 581 |||||||||||||||||||||||| Sbjct: 58040 gaagaatgagccggcgactcatag 58017
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1102 bits (556), Expect = 0.0 Identities = 562/564 (99%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268191 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 9268250 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9268251 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 9268310 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268311 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 9268370 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268371 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 9268430 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268431 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 9268490 Query: 318 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 377 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9268491 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 9268550 Query: 378 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268551 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 9268610 Query: 438 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268611 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 9268670 Query: 498 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268671 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 9268730 Query: 558 gaagaatgagccggcgactcatag 581 |||||||||||||||||||||||| Sbjct: 9268731 gaagaatgagccggcgactcatag 9268754 Score = 1102 bits (556), Expect = 0.0 Identities = 562/564 (99%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227691 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 9227750 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9227751 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 9227810 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227811 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 9227870 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227871 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 9227930 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227931 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 9227990 Query: 318 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 377 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9227991 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 9228050 Query: 378 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228051 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 9228110 Query: 438 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228111 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 9228170 Query: 498 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228171 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 9228230 Query: 558 gaagaatgagccggcgactcatag 581 |||||||||||||||||||||||| Sbjct: 9228231 gaagaatgagccggcgactcatag 9228254 Score = 1102 bits (556), Expect = 0.0 Identities = 562/564 (99%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164280 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 9164339 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9164340 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 9164399 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164400 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 9164459 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164460 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 9164519 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164520 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 9164579 Query: 318 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 377 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9164580 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 9164639 Query: 378 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164640 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 9164699 Query: 438 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164700 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 9164759 Query: 498 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164760 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 9164819 Query: 558 gaagaatgagccggcgactcatag 581 |||||||||||||||||||||||| Sbjct: 9164820 gaagaatgagccggcgactcatag 9164843 Score = 1094 bits (552), Expect = 0.0 Identities = 561/564 (99%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056105 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 9056164 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9056165 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 9056224 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056225 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 9056284 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056285 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 9056344 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056345 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 9056404 Query: 318 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 377 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9056405 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 9056464 Query: 378 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 437 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056465 tcctgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 9056524 Query: 438 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056525 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 9056584 Query: 498 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056585 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 9056644 Query: 558 gaagaatgagccggcgactcatag 581 |||||||||||||||||||||||| Sbjct: 9056645 gaagaatgagccggcgactcatag 9056668 Score = 165 bits (83), Expect = 2e-37 Identities = 101/107 (94%) Strand = Plus / Minus Query: 425 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 484 |||||| |||||||||||||| || |||||||||||| |||||||||||||||||||||| Sbjct: 25171513 ggtgactgatagcgaagtagtgccatgagggaaaggtaaaaagaacccccagtgggtagt 25171454 Query: 485 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 531 |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 25171453 gaaatagaacatgaaaccgtgctgagctcccaagcagtggtagggga 25171407
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1102 bits (556), Expect = 0.0 Identities = 562/564 (99%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938176 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 19938235 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 19938236 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 19938295 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938296 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 19938355 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938356 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 19938415 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938416 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 19938475 Query: 318 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 377 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 19938476 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 19938535 Query: 378 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938536 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 19938595 Query: 438 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938596 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 19938655 Query: 498 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938656 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 19938715 Query: 558 gaagaatgagccggcgactcatag 581 |||||||||||||||||||||||| Sbjct: 19938716 gaagaatgagccggcgactcatag 19938739 Score = 1102 bits (556), Expect = 0.0 Identities = 562/564 (99%) Strand = Plus / Minus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277255 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 10277196 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10277195 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 10277136 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277135 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 10277076 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277075 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 10277016 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277015 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 10276956 Query: 318 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 377 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10276955 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 10276896 Query: 378 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276895 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 10276836 Query: 438 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276835 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 10276776 Query: 498 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276775 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 10276716 Query: 558 gaagaatgagccggcgactcatag 581 |||||||||||||||||||||||| Sbjct: 10276715 gaagaatgagccggcgactcatag 10276692 Score = 1094 bits (552), Expect = 0.0 Identities = 561/564 (99%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387043 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 10387102 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10387103 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 10387162 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387163 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 10387222 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387223 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 10387282 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387283 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 10387342 Query: 318 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 377 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10387343 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 10387402 Query: 378 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387403 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 10387462 Query: 438 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 497 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 10387463 gaagtagtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtg 10387522 Query: 498 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387523 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 10387582 Query: 558 gaagaatgagccggcgactcatag 581 |||||||||||||||||||||||| Sbjct: 10387583 gaagaatgagccggcgactcatag 10387606 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 443 agtaccgtgagggaaaggtgaaaagaacccc 473 ||||||||||||||||||||||||||||||| Sbjct: 2736641 agtaccgtgagggaaaggtgaaaagaacccc 2736611 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 268 ttgtgctgctaggcgaagcggttgagtgc 296 ||||||| ||||| ||||||||||||||| Sbjct: 8517723 ttgtgcttctaggtgaagcggttgagtgc 8517751
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1102 bits (556), Expect = 0.0 Identities = 562/564 (99%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598358 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 31598417 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 31598418 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 31598477 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598478 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 31598537 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598538 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 31598597 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598598 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 31598657 Query: 318 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 377 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 31598658 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 31598717 Query: 378 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598718 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 31598777 Query: 438 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598778 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 31598837 Query: 498 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598838 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 31598897 Query: 558 gaagaatgagccggcgactcatag 581 |||||||||||||||||||||||| Sbjct: 31598898 gaagaatgagccggcgactcatag 31598921
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1102 bits (556), Expect = 0.0 Identities = 562/564 (99%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525674 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 33525733 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 33525734 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 33525793 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525794 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 33525853 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525854 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 33525913 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525914 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 33525973 Query: 318 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 377 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 33525974 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 33526033 Query: 378 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526034 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 33526093 Query: 438 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526094 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 33526153 Query: 498 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526154 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 33526213 Query: 558 gaagaatgagccggcgactcatag 581 |||||||||||||||||||||||| Sbjct: 33526214 gaagaatgagccggcgactcatag 33526237 Score = 252 bits (127), Expect = 1e-63 Identities = 133/135 (98%) Strand = Plus / Minus Query: 447 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 506 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 16678101 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 16678042 Query: 507 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 566 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16678041 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 16677982 Query: 567 gccggcgactcatag 581 ||||||||||||||| Sbjct: 16677981 gccggcgactcatag 16677967 Score = 194 bits (98), Expect = 2e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 461 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 520 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 32744772 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 32744713 Query: 521 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 570 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32744712 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 32744663 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 427 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 473 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33538588 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33538634 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 427 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 473 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33499956 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33500002 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 454 ggaaaggtgaaaagaacccccagtgggtagtgaaataga 492 |||||||||||||||||||| ||| |||||||||||||| Sbjct: 37705382 ggaaaggtgaaaagaacccctagtaggtagtgaaataga 37705420 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttc 51 |||||| ||||| ||||||||||||||||||||| Sbjct: 19455163 acgaggtagggcatagcaagcgacgaaatgcttc 19455196
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1102 bits (556), Expect = 0.0 Identities = 562/564 (99%) Strand = Plus / Minus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47867 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 47808 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 47807 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 47748 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47747 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 47688 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47687 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 47628 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47627 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 47568 Query: 318 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 377 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 47567 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 47508 Query: 378 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47507 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 47448 Query: 438 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47447 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 47388 Query: 498 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47387 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 47328 Query: 558 gaagaatgagccggcgactcatag 581 |||||||||||||||||||||||| Sbjct: 47327 gaagaatgagccggcgactcatag 47304
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1102 bits (556), Expect = 0.0 Identities = 562/564 (99%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70871 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 70930 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 70931 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 70990 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70991 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 71050 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71051 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 71110 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71111 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 71170 Query: 318 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 377 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 71171 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 71230 Query: 378 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71231 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 71290 Query: 438 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71291 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 71350 Query: 498 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71351 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 71410 Query: 558 gaagaatgagccggcgactcatag 581 |||||||||||||||||||||||| Sbjct: 71411 gaagaatgagccggcgactcatag 71434 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 427 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 473 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 83785 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 83831 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 427 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 473 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 45153 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 45199
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 1102 bits (556), Expect = 0.0 Identities = 562/564 (99%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 102 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 103 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 162 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 163 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 222 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 223 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 282 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 283 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 342 Query: 318 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 377 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 343 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 402 Query: 378 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 403 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 462 Query: 438 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 463 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 522 Query: 498 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 523 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 582 Query: 558 gaagaatgagccggcgactcatag 581 |||||||||||||||||||||||| Sbjct: 583 gaagaatgagccggcgactcatag 606
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 1102 bits (556), Expect = 0.0 Identities = 562/564 (99%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 40 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 99 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 100 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 159 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 219 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 220 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 279 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 280 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 339 Query: 318 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 377 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 340 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 399 Query: 378 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 459 Query: 438 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 460 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 519 Query: 498 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 520 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 579 Query: 558 gaagaatgagccggcgactcatag 581 |||||||||||||||||||||||| Sbjct: 580 gaagaatgagccggcgactcatag 603
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1102 bits (556), Expect = 0.0 Identities = 562/564 (99%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949452 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 19949511 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 19949512 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 19949571 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949572 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 19949631 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949632 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 19949691 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949692 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 19949751 Query: 318 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 377 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 19949752 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 19949811 Query: 378 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949812 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 19949871 Query: 438 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949872 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 19949931 Query: 498 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949932 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 19949991 Query: 558 gaagaatgagccggcgactcatag 581 |||||||||||||||||||||||| Sbjct: 19949992 gaagaatgagccggcgactcatag 19950015 Score = 1102 bits (556), Expect = 0.0 Identities = 562/564 (99%) Strand = Plus / Minus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283294 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 10283235 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10283234 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 10283175 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283174 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 10283115 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283114 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 10283055 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283054 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 10282995 Query: 318 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 377 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10282994 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 10282935 Query: 378 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282934 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 10282875 Query: 438 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282874 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 10282815 Query: 498 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282814 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 10282755 Query: 558 gaagaatgagccggcgactcatag 581 |||||||||||||||||||||||| Sbjct: 10282754 gaagaatgagccggcgactcatag 10282731 Score = 1094 bits (552), Expect = 0.0 Identities = 561/564 (99%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393082 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 10393141 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10393142 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 10393201 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393202 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 10393261 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393262 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 10393321 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393322 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 10393381 Query: 318 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 377 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10393382 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 10393441 Query: 378 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393442 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 10393501 Query: 438 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 497 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 10393502 gaagtagtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtg 10393561 Query: 498 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393562 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 10393621 Query: 558 gaagaatgagccggcgactcatag 581 |||||||||||||||||||||||| Sbjct: 10393622 gaagaatgagccggcgactcatag 10393645 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 427 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 473 ||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 2736608 tgaccgatagcatacaagtaccgtgagggaaaggtgaaaagaacccc 2736562 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 268 ttgtgctgctaggcgaagcggttgagtgc 296 ||||||| ||||| ||||||||||||||| Sbjct: 8522822 ttgtgcttctaggtgaagcggttgagtgc 8522850
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1102 bits (556), Expect = 0.0 Identities = 562/564 (99%) Strand = Plus / Minus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119835 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 119776 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119775 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 119716 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119715 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 119656 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119655 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 119596 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119595 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 119536 Query: 318 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 377 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119535 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 119476 Query: 378 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119475 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 119416 Query: 438 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119415 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 119356 Query: 498 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119355 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 119296 Query: 558 gaagaatgagccggcgactcatag 581 |||||||||||||||||||||||| Sbjct: 119295 gaagaatgagccggcgactcatag 119272 Score = 1102 bits (556), Expect = 0.0 Identities = 562/564 (99%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95204 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 95263 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95264 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 95323 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95324 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 95383 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95384 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 95443 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95444 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 95503 Query: 318 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 377 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95504 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 95563 Query: 378 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95564 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 95623 Query: 438 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95624 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 95683 Query: 498 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95684 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 95743 Query: 558 gaagaatgagccggcgactcatag 581 |||||||||||||||||||||||| Sbjct: 95744 gaagaatgagccggcgactcatag 95767
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1094 bits (552), Expect = 0.0 Identities = 561/564 (99%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140839 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 140898 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 140899 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 140958 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140959 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 141018 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141019 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 141078 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141079 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 141138 Query: 318 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 377 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 141139 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 141198 Query: 378 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 437 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141199 tcctgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 141258 Query: 438 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141259 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 141318 Query: 498 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141319 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 141378 Query: 558 gaagaatgagccggcgactcatag 581 |||||||||||||||||||||||| Sbjct: 141379 gaagaatgagccggcgactcatag 141402
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1094 bits (552), Expect = 0.0 Identities = 561/564 (99%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93435 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 93494 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 93495 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 93554 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93555 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 93614 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93615 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 93674 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93675 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 93734 Query: 318 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 377 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 93735 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 93794 Query: 378 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93795 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 93854 Query: 438 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 497 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 93855 gaagtagtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtg 93914 Query: 498 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93915 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 93974 Query: 558 gaagaatgagccggcgactcatag 581 |||||||||||||||||||||||| Sbjct: 93975 gaagaatgagccggcgactcatag 93998
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1094 bits (552), Expect = 0.0 Identities = 561/564 (99%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27499 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 27558 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 27559 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 27618 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27619 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 27678 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27679 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 27738 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27739 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 27798 Query: 318 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 377 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 27799 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 27858 Query: 378 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27859 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 27918 Query: 438 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 497 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 27919 gaagtagtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtg 27978 Query: 498 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27979 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 28038 Query: 558 gaagaatgagccggcgactcatag 581 |||||||||||||||||||||||| Sbjct: 28039 gaagaatgagccggcgactcatag 28062
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1086 bits (548), Expect = 0.0 Identities = 560/564 (99%) Strand = Plus / Minus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9242090 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 9242031 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9242030 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 9241971 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241970 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 9241911 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241910 gtagtagcagcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 9241851 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241850 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 9241791 Query: 318 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 377 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9241790 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 9241731 Query: 378 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241730 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 9241671 Query: 438 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241670 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 9241611 Query: 498 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241610 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 9241551 Query: 558 gaagaatgagccggcgactcatag 581 ||||||||||| |||||||||||| Sbjct: 9241550 gaagaatgagctggcgactcatag 9241527 Score = 67.9 bits (34), Expect = 3e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 150 actgaaacatcttagtagccagaggaaaagaaag 183 |||||||||||||||||||||||||||||||||| Sbjct: 10177929 actgaaacatcttagtagccagaggaaaagaaag 10177896
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1086 bits (548), Expect = 0.0 Identities = 560/564 (99%) Strand = Plus / Minus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53303 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 53244 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 53243 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 53184 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53183 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 53124 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53123 gtagtagcagcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 53064 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53063 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 53004 Query: 318 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 377 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 53003 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 52944 Query: 378 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52943 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 52884 Query: 438 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52883 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 52824 Query: 498 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52823 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 52764 Query: 558 gaagaatgagccggcgactcatag 581 ||||||||||| |||||||||||| Sbjct: 52763 gaagaatgagctggcgactcatag 52740
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 1084 bits (547), Expect = 0.0 Identities = 559/563 (99%) Strand = Plus / Plus Query: 19 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 Query: 79 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 138 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 61 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 120 Query: 139 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 Query: 199 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 Query: 259 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 318 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gtacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 Query: 319 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 378 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 301 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 360 Query: 379 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 Query: 439 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 Query: 499 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 558 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 481 aaccgtgctgagctcccaagcagtgggaggggaaattgatctctgaccgcgtgcctgttg 540 Query: 559 aagaatgagccggcgactcatag 581 ||||||||||||||||||||||| Sbjct: 541 aagaatgagccggcgactcatag 563
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1045 bits (527), Expect = 0.0 Identities = 570/581 (98%), Gaps = 3/581 (0%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaag-ggcgtagcaagcgacgaaatgcttcggggagttg 60 ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 123646 cctaggcacccagag-acgaggaagaggcgtagcaagcgacgaaatgcttcggggagttg 123588 Query: 61 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 120 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 123587 aaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgccgaat 123528 Query: 121 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123527 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 123468 Query: 181 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123467 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 123408 Query: 241 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 300 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123407 cggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 123348 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 360 ||||||||||||| |||||||||||||| ||||||||| ||||| ||||||||||||||| Sbjct: 123347 ccctagatggctatagtccagtagccgatagcatcact-gcttacgctctgacccgagta 123289 Query: 361 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123288 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 123229 Query: 421 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123228 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 123169 Query: 481 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123168 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 123109 Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 123108 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 123068 Score = 1045 bits (527), Expect = 0.0 Identities = 570/581 (98%), Gaps = 3/581 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaag-ggcgtagcaagcgacgaaatgcttcggggagttg 60 ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 99091 cctaggcacccagag-acgaggaagaggcgtagcaagcgacgaaatgcttcggggagttg 99149 Query: 61 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 120 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 99150 aaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgccgaat 99209 Query: 121 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99210 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 99269 Query: 181 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99270 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 99329 Query: 241 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 300 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99330 cggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 99389 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 360 ||||||||||||| |||||||||||||| ||||||||| ||||| ||||||||||||||| Sbjct: 99390 ccctagatggctatagtccagtagccgatagcatcact-gcttacgctctgacccgagta 99448 Query: 361 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99449 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 99508 Query: 421 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99509 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 99568 Query: 481 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99569 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 99628 Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 99629 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 99669
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1045 bits (527), Expect = 0.0 Identities = 570/581 (98%), Gaps = 3/581 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaag-ggcgtagcaagcgacgaaatgcttcggggagttg 60 ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 5444 cctaggcacccagag-acgaggaagaggcgtagcaagcgacgaaatgcttcggggagttg 5502 Query: 61 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 120 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 5503 aaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgccgaat 5562 Query: 121 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5563 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 5622 Query: 181 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5623 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 5682 Query: 241 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 300 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5683 cggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 5742 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 360 ||||||||||||| |||||||||||||| ||||||||| ||||| ||||||||||||||| Sbjct: 5743 ccctagatggctatagtccagtagccgatagcatcact-gcttacgctctgacccgagta 5801 Query: 361 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5802 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 5861 Query: 421 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5862 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 5921 Query: 481 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5922 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 5981 Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 5982 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 6022
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1045 bits (527), Expect = 0.0 Identities = 570/581 (98%), Gaps = 3/581 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaag-ggcgtagcaagcgacgaaatgcttcggggagttg 60 ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 32 cctaggcacccagag-acgaggaagaggcgtagcaagcgacgaaatgcttcggggagttg 90 Query: 61 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 120 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 91 aaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgccgaat 150 Query: 121 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 151 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 210 Query: 181 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 211 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 270 Query: 241 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 300 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 271 cggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 330 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 360 ||||||||||||| |||||||||||||| ||||||||| ||||| ||||||||||||||| Sbjct: 331 ccctagatggctatagtccagtagccgatagcatcact-gcttacgctctgacccgagta 389 Query: 361 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 390 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 449 Query: 421 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 450 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 509 Query: 481 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 510 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 569 Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 570 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 610
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 1001 bits (505), Expect = 0.0 Identities = 511/513 (99%) Strand = Plus / Plus Query: 69 catagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagc 128 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1 catagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagc 60 Query: 129 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 120 Query: 189 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 180 Query: 249 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 240 Query: 309 ggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgggg 368 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 241 ggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgggg 300 Query: 369 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 360 Query: 429 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 420 Query: 489 tagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgc 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 tagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgc 480 Query: 549 gtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||| Sbjct: 481 gtgcctgttgaagaatgagccggcgactcatag 513
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 985 bits (497), Expect = 0.0 Identities = 506/509 (99%) Strand = Plus / Plus Query: 73 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 132 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 60 Query: 133 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 120 Query: 193 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 180 Query: 253 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 240 Query: 313 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 372 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 241 aaagtccagtagccgaaagcatcgctagcttacgctctgacccgagtagcatggggcacg 300 Query: 373 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 360 Query: 433 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 420 Query: 493 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 480 Query: 553 ctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||| Sbjct: 481 ctgttgaagaatgagccggcgactcatag 509
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 936 bits (472), Expect = 0.0 Identities = 475/476 (99%) Strand = Plus / Plus Query: 106 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 60 Query: 166 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 120 Query: 226 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 180 Query: 286 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 345 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttac 240 Query: 346 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 300 Query: 406 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 360 Query: 466 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 420 Query: 526 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 476
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 928 bits (468), Expect = 0.0 Identities = 554/580 (95%), Gaps = 5/580 (0%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139556 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 139498 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||| Sbjct: 139497 aaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatc 139439 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139438 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 139379 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139378 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 139319 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| |||||||||||||||||||| |||| | |||| Sbjct: 139318 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtactgcac 139259 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 |||||||||| | |||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 139258 cctagatggcgagagtccagtagccgaaagcatcactggcttacgctctgacccgagtag 139199 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139198 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 139139 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 139138 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggg 139079 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 ||||||||||||| |||||||| |||||||||||||||||||||| ||| ||||||| Sbjct: 139078 agtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaatttgatctc 139022 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||| Sbjct: 139021 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 138982 Score = 928 bits (468), Expect = 0.0 Identities = 554/580 (95%), Gaps = 5/580 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110389 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 110447 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||| Sbjct: 110448 aaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatc 110506 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110507 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 110566 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110567 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 110626 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| |||||||||||||||||||| |||| | |||| Sbjct: 110627 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtactgcac 110686 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 |||||||||| | |||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 110687 cctagatggcgagagtccagtagccgaaagcatcactggcttacgctctgacccgagtag 110746 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110747 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 110806 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 110807 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggg 110866 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 ||||||||||||| |||||||| |||||||||||||||||||||| ||| ||||||| Sbjct: 110867 agtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaatttgatctc 110923 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||| Sbjct: 110924 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 110963
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 928 bits (468), Expect = 0.0 Identities = 554/580 (95%), Gaps = 5/580 (0%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127834 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 127776 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||| Sbjct: 127775 aaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatc 127717 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127716 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 127657 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127656 agcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 127597 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||| Sbjct: 127596 ggggttgtgggagagcaatacaagcgtcatgctgctaggcgaagcggtggagtgctgcac 127537 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 |||||||||| | |||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct: 127536 cctagatggcgagagtccagtagccgaaaacatcactagcttacgctctgacccgagtag 127477 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127476 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 127417 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 127416 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggg 127357 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 ||||||||||||| |||||||| |||||||||||||||||||||| ||| |||||||| Sbjct: 127356 agtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaatgtgatctc 127300 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||| Sbjct: 127299 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 127260 Score = 928 bits (468), Expect = 0.0 Identities = 554/580 (95%), Gaps = 5/580 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107088 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 107146 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||| Sbjct: 107147 aaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatc 107205 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107206 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 107265 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107266 agcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 107325 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||| Sbjct: 107326 ggggttgtgggagagcaatacaagcgtcatgctgctaggcgaagcggtggagtgctgcac 107385 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 |||||||||| | |||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct: 107386 cctagatggcgagagtccagtagccgaaaacatcactagcttacgctctgacccgagtag 107445 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107446 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 107505 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 107506 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggg 107565 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 ||||||||||||| |||||||| |||||||||||||||||||||| ||| |||||||| Sbjct: 107566 agtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaatgtgatctc 107622 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||| Sbjct: 107623 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 107662
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 928 bits (468), Expect = 0.0 Identities = 554/580 (95%), Gaps = 5/580 (0%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134193 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 134135 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||| Sbjct: 134134 aaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatc 134076 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134075 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 134016 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134015 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 133956 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||||| || || ||| |||| Sbjct: 133955 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggaatgctgcac 133896 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 |||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 133895 cctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 133836 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133835 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 133776 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 133775 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggg 133716 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 ||||||||||||| |||||||| | |||||||||||||||||||| ||| |||||||| Sbjct: 133715 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatgtgatctc 133659 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||| Sbjct: 133658 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 133619 Score = 928 bits (468), Expect = 0.0 Identities = 554/580 (95%), Gaps = 5/580 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103778 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 103836 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||| Sbjct: 103837 aaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatc 103895 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103896 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 103955 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103956 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 104015 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||||| || || ||| |||| Sbjct: 104016 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggaatgctgcac 104075 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 |||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 104076 cctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 104135 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104136 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 104195 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 104196 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggg 104255 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 ||||||||||||| |||||||| | |||||||||||||||||||| ||| |||||||| Sbjct: 104256 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatgtgatctc 104312 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||| Sbjct: 104313 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 104352
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 922 bits (465), Expect = 0.0 Identities = 471/473 (99%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 103 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 104 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 163 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 223 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 224 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 283 Query: 258 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 284 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 343 Query: 318 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 377 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 344 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 403 Query: 378 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 404 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 463 Query: 438 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 490 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 464 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 516
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 912 bits (460), Expect = 0.0 Identities = 552/580 (95%), Gaps = 5/580 (0%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142078 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 142020 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||| ||||||||||| |||||| ||||||||| Sbjct: 142019 aaataagcatagatccggagattcccgaatgggtcaacctttcgaactgc-tgctgaatc 141961 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141960 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 141901 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141900 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 141841 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||| Sbjct: 141840 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggttgagtactgcac 141781 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 |||||||||| | ||||||||| |||||||||||||| ||||| |||||||||||||||| Sbjct: 141780 cctagatggcgagagtccagtaaccgaaagcatcactggcttacgctctgacccgagtag 141721 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 141720 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactc 141661 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 141660 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggg 141601 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 ||||||||||||| |||||||| |||||||||||||||||||||| ||| ||||||| Sbjct: 141600 agtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaatttgatctc 141544 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||| Sbjct: 141543 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 141504 Score = 912 bits (460), Expect = 0.0 Identities = 552/580 (95%), Gaps = 5/580 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111579 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 111637 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||| ||||||||||| |||||| ||||||||| Sbjct: 111638 aaataagcatagatccggagattcccgaatgggtcaacctttcgaactgc-tgctgaatc 111696 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111697 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 111756 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111757 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 111816 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||| Sbjct: 111817 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggttgagtactgcac 111876 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 |||||||||| | ||||||||| |||||||||||||| ||||| |||||||||||||||| Sbjct: 111877 cctagatggcgagagtccagtaaccgaaagcatcactggcttacgctctgacccgagtag 111936 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 111937 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactc 111996 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 111997 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggg 112056 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 ||||||||||||| |||||||| |||||||||||||||||||||| ||| ||||||| Sbjct: 112057 agtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaatttgatctc 112113 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||| Sbjct: 112114 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 112153
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 902 bits (455), Expect = 0.0 Identities = 551/580 (95%), Gaps = 9/580 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 134951 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 134893 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||| Sbjct: 134892 aaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatc 134834 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134833 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 134774 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134773 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 134714 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||||| || |||||| |||| Sbjct: 134713 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgctgcac 134654 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 |||||||||||| |||||||||||||||||||||||||||||| | ||| |||||||||| Sbjct: 134653 cctagatggctagagtccagtagccgaaagcatcactagcttacgttctaacccgagtag 134594 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134593 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 134534 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 134533 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggg 134474 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 ||||||||||||| |||||||| |||||||||||||||||||||| ||| ||||| Sbjct: 134473 agtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaa----atctc 134421 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||| Sbjct: 134420 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 134381 Score = 902 bits (455), Expect = 0.0 Identities = 551/580 (95%), Gaps = 9/580 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 105331 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 105389 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||| Sbjct: 105390 aaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatc 105448 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105449 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 105508 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105509 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 105568 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||||| || |||||| |||| Sbjct: 105569 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgctgcac 105628 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 |||||||||||| |||||||||||||||||||||||||||||| | ||| |||||||||| Sbjct: 105629 cctagatggctagagtccagtagccgaaagcatcactagcttacgttctaacccgagtag 105688 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105689 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 105748 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 105749 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggg 105808 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 ||||||||||||| |||||||| |||||||||||||||||||||| ||| ||||| Sbjct: 105809 agtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaa----atctc 105861 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||| Sbjct: 105862 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 105901
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 898 bits (453), Expect = 0.0 Identities = 551/580 (95%), Gaps = 7/580 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 136561 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 136503 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||| Sbjct: 136502 aaataagcatagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatc 136444 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136443 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 136384 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136383 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 136324 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||| Sbjct: 136323 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcac 136264 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 |||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 136263 cctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 136204 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136203 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 136144 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 136143 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 136084 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 ||||||||||||| |||||||| | |||||||||||||||||||| | || | ||| Sbjct: 136083 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctc 136029 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||| Sbjct: 136028 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 135989 Score = 898 bits (453), Expect = 0.0 Identities = 551/580 (95%), Gaps = 7/580 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 105864 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 105922 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||| Sbjct: 105923 aaataagcatagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatc 105981 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105982 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 106041 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106042 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 106101 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||| Sbjct: 106102 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcac 106161 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 |||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 106162 cctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 106221 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106222 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 106281 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 106282 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 106341 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 ||||||||||||| |||||||| | |||||||||||||||||||| | || | ||| Sbjct: 106342 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctc 106396 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||| Sbjct: 106397 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 106436
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 880 bits (444), Expect = 0.0 Identities = 549/580 (94%), Gaps = 6/580 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 132745 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 132687 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||||||| ||||||| ||||||| ||||||||| Sbjct: 132686 aaataagcatagatccggagattcccgaataggttaacctttcaaactgc-tgctgaatc 132628 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132627 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 132568 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132567 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 132508 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||||| || || ||| |||| Sbjct: 132507 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcac 132448 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132447 cctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 132388 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132387 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 132328 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 132327 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 132268 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 ||||||||||||| |||||||| | |||||||||||||||||||| | | | ||| Sbjct: 132267 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggctc 132212 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||| Sbjct: 132211 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 132172 Score = 880 bits (444), Expect = 0.0 Identities = 549/580 (94%), Gaps = 6/580 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 104133 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 104191 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||||||| ||||||| ||||||| ||||||||| Sbjct: 104192 aaataagcatagatccggagattcccgaataggttaacctttcaaactgc-tgctgaatc 104250 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104251 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 104310 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104311 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 104370 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||||| || || ||| |||| Sbjct: 104371 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcac 104430 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104431 cctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 104490 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104491 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 104550 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 104551 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 104610 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 ||||||||||||| |||||||| | |||||||||||||||||||| | | | ||| Sbjct: 104611 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggctc 104666 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||| Sbjct: 104667 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 104706
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 880 bits (444), Expect = 0.0 Identities = 549/580 (94%), Gaps = 6/580 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 132968 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 132910 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| ||||||||||||||||| ||||||| |||||||| |||||| ||||||||| Sbjct: 132909 aaataagcgtagatccggagattcccgaataggttaaccttttgaactgc-tgctgaatc 132851 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132850 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 132791 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132790 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 132731 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||| Sbjct: 132730 ggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtggagtgccgcac 132671 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132670 cctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 132611 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132610 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 132551 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 132550 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 132491 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 ||||||||||||| |||||||| | |||||||||||||||||||| | || ||| Sbjct: 132490 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-ccctgggctc 132435 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||| Sbjct: 132434 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 132395 Score = 880 bits (444), Expect = 0.0 Identities = 549/580 (94%), Gaps = 6/580 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 103796 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 103854 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| ||||||||||||||||| ||||||| |||||||| |||||| ||||||||| Sbjct: 103855 aaataagcgtagatccggagattcccgaataggttaaccttttgaactgc-tgctgaatc 103913 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103914 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 103973 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103974 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 104033 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||| Sbjct: 104034 ggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtggagtgccgcac 104093 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104094 cctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 104153 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104154 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 104213 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 104214 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 104273 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 ||||||||||||| |||||||| | |||||||||||||||||||| | || ||| Sbjct: 104274 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-ccctgggctc 104329 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||| Sbjct: 104330 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 104369
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 880 bits (444), Expect = 0.0 Identities = 549/580 (94%), Gaps = 6/580 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 132738 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 132680 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||||||| ||||||| ||||||| ||||||||| Sbjct: 132679 aaataagcatagatccggagattcccgaataggttaacctttcaaactgc-tgctgaatc 132621 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132620 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 132561 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132560 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 132501 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||||| || || ||| |||| Sbjct: 132500 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcac 132441 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132440 cctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 132381 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132380 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 132321 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 132320 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 132261 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 ||||||||||||| |||||||| | |||||||||||||||||||| | | | ||| Sbjct: 132260 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggctc 132205 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||| Sbjct: 132204 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 132165 Score = 880 bits (444), Expect = 0.0 Identities = 549/580 (94%), Gaps = 6/580 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 104131 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 104189 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||||||| ||||||| ||||||| ||||||||| Sbjct: 104190 aaataagcatagatccggagattcccgaataggttaacctttcaaactgc-tgctgaatc 104248 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104249 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 104308 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104309 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 104368 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||||| || || ||| |||| Sbjct: 104369 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcac 104428 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104429 cctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 104488 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104489 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 104548 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 104549 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 104608 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 ||||||||||||| |||||||| | |||||||||||||||||||| | | | ||| Sbjct: 104609 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggctc 104664 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||| Sbjct: 104665 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 104704
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 872 bits (440), Expect = 0.0 Identities = 548/580 (94%), Gaps = 6/580 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 131637 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 131579 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||||||| ||||||| ||||||| ||||||||| Sbjct: 131578 aaataagcatagatccggagattcccgaataggttaacctttcaaactgc-tgctgaatc 131520 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131519 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 131460 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131459 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 131400 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||||| || || ||| |||| Sbjct: 131399 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcac 131340 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 131339 cctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 131280 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131279 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 131220 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 131219 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 131160 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 ||||||||||||| |||||||| | |||||||||||||||||||| | | | ||| Sbjct: 131159 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggctc 131104 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||| Sbjct: 131103 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 131064 Score = 872 bits (440), Expect = 0.0 Identities = 548/580 (94%), Gaps = 6/580 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 102998 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 103056 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||||||| ||||||| ||||||| ||||||||| Sbjct: 103057 aaataagcatagatccggagattcccgaataggttaacctttcaaactgc-tgctgaatc 103115 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103116 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 103175 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103176 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 103235 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||||| || || ||| |||| Sbjct: 103236 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcac 103295 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 103296 cctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 103355 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103356 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 103415 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 103416 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 103475 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 ||||||||||||| |||||||| | |||||||||||||||||||| | | | ||| Sbjct: 103476 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggctc 103531 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||| Sbjct: 103532 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 103571
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 872 bits (440), Expect = 0.0 Identities = 548/580 (94%), Gaps = 6/580 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 133929 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 133871 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| ||||||||||||||||| ||||||| |||||||| |||||| ||||||||| Sbjct: 133870 aaataagcgtagatccggagattcccgaataggttaaccttttgaactgc-tgctgaatc 133812 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133811 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 133752 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133751 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 133692 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||| | |||||| |||||||||||||||||||| ||||||||||| Sbjct: 133691 ggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtggagtgccgcac 133632 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133631 cctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 133572 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133571 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 133512 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 133511 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 133452 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 ||||||||||||| |||||||| | |||||||||||||||||||| | || ||| Sbjct: 133451 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-ccctgggctc 133396 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||| Sbjct: 133395 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 133356 Score = 872 bits (440), Expect = 0.0 Identities = 548/580 (94%), Gaps = 6/580 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 104720 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 104778 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| ||||||||||||||||| ||||||| |||||||| |||||| ||||||||| Sbjct: 104779 aaataagcgtagatccggagattcccgaataggttaaccttttgaactgc-tgctgaatc 104837 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104838 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 104897 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104898 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 104957 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||| | |||||| |||||||||||||||||||| ||||||||||| Sbjct: 104958 ggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtggagtgccgcac 105017 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105018 cctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 105077 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105078 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 105137 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 105138 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 105197 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 ||||||||||||| |||||||| | |||||||||||||||||||| | || ||| Sbjct: 105198 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-ccctgggctc 105253 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||| Sbjct: 105254 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 105293
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 864 bits (436), Expect = 0.0 Identities = 547/580 (94%), Gaps = 6/580 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 140330 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 140272 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||| Sbjct: 140271 aaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatc 140213 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140212 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 140153 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140152 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 140093 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||||||| || ||| |||| Sbjct: 140092 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggcggaatgctgcac 140033 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 |||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 140032 cctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 139973 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139972 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 139913 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 139912 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 139853 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 ||||||||||||| |||||||| | || ||||||||||||||||| | | | | ||| Sbjct: 139852 agtgaaatagaacatgaaaccg---taagttcccaagcagtgggaggag-acgggggctc 139797 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||| Sbjct: 139796 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 139757 Score = 864 bits (436), Expect = 0.0 Identities = 547/580 (94%), Gaps = 6/580 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 109730 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 109788 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||| Sbjct: 109789 aaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatc 109847 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109848 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 109907 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109908 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 109967 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||||||| || ||| |||| Sbjct: 109968 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggcggaatgctgcac 110027 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 |||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 110028 cctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 110087 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110088 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 110147 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 110148 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 110207 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 ||||||||||||| |||||||| | || ||||||||||||||||| | | | | ||| Sbjct: 110208 agtgaaatagaacatgaaaccg---taagttcccaagcagtgggaggag-acgggggctc 110263 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||| Sbjct: 110264 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 110303
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 864 bits (436), Expect = 0.0 Identities = 547/580 (94%), Gaps = 6/580 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 29 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 87 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| ||||||||||||||||| ||||||| |||||||| |||||| ||||||||| Sbjct: 88 aaataagcgtagatccggagattcccgaataggttaaccttttgaactgc-tgctgaatc 146 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 147 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 206 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 207 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 266 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||| | |||||| |||||||||||||||||||| ||||||||||| Sbjct: 267 ggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtggagtgccgcac 326 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 |||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 327 cctagatggcgagagtccagtagccgagagcatcactagcttatgctctgacccgagtag 386 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 446 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 447 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 506 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 ||||||||||||| |||||||| | |||||||||||||||||||| | || ||| Sbjct: 507 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-ccctgggctc 562 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||| Sbjct: 563 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 602
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 864 bits (436), Expect = 0.0 Identities = 547/580 (94%), Gaps = 6/580 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 38 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 96 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||| Sbjct: 97 aaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatc 155 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 156 catgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaa 215 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 216 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 275 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||||| || |||||| |||| Sbjct: 276 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgctgcac 335 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 |||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 336 cctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 395 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 396 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 455 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 456 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 515 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 ||||||||||||| |||||||| | |||||||||||||||||||| | | | ||| Sbjct: 516 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggctc 571 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||| Sbjct: 572 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 611
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 852 bits (430), Expect = 0.0 Identities = 547/581 (94%), Gaps = 8/581 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| Sbjct: 136270 cctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttga 136212 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||||| Sbjct: 136211 aaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatc 136153 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136152 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 136093 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136092 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 136033 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgca 300 ||||||||||||||||||||||||||| ||||||||||||||||| | || ||| ||| Sbjct: 136032 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgca 135973 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 360 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135972 ccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 135913 Query: 361 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135912 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 135853 Query: 421 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 480 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 135852 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 135793 Query: 481 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 540 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 135792 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ct 135738 Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135737 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 135697 Score = 852 bits (430), Expect = 0.0 Identities = 547/581 (94%), Gaps = 8/581 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| Sbjct: 106360 cctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttga 106418 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||||| Sbjct: 106419 aaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatc 106477 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106478 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 106537 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106538 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 106597 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgca 300 ||||||||||||||||||||||||||| ||||||||||||||||| | || ||| ||| Sbjct: 106598 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgca 106657 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 360 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106658 ccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 106717 Query: 361 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106718 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 106777 Query: 421 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 480 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 106778 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 106837 Query: 481 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 540 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 106838 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ct 106892 Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106893 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 106933
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 852 bits (430), Expect = 0.0 Identities = 547/581 (94%), Gaps = 8/581 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| Sbjct: 136908 cctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttga 136850 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||||| Sbjct: 136849 aaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatc 136791 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136790 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 136731 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136730 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 136671 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgca 300 ||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||| Sbjct: 136670 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgca 136611 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 360 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 136610 ccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 136551 Query: 361 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136550 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 136491 Query: 421 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 480 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 136490 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 136431 Query: 481 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 540 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 136430 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ct 136376 Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 136375 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 136335 Score = 852 bits (430), Expect = 0.0 Identities = 547/581 (94%), Gaps = 8/581 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| Sbjct: 106649 cctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttga 106707 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||||| Sbjct: 106708 aaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatc 106766 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106767 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 106826 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106827 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 106886 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgca 300 ||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||| Sbjct: 106887 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgca 106946 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 360 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 106947 ccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 107006 Query: 361 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107007 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 107066 Query: 421 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 480 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 107067 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 107126 Query: 481 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 540 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 107127 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ct 107181 Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 107182 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 107222
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 852 bits (430), Expect = 0.0 Identities = 547/581 (94%), Gaps = 8/581 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| Sbjct: 1554 cctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttga 1612 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||||| Sbjct: 1613 aaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatc 1671 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1672 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 1731 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1732 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 1791 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgca 300 ||||||||||||||||||||||||||| ||||||||||||||||| | || ||| ||| Sbjct: 1792 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgca 1851 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 360 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1852 ccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 1911 Query: 361 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1912 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 1971 Query: 421 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 480 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 1972 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 2031 Query: 481 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 540 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 2032 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ct 2086 Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2087 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 2127
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 852 bits (430), Expect = 0.0 Identities = 547/581 (94%), Gaps = 8/581 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| Sbjct: 135516 cctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttga 135458 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||||| Sbjct: 135457 aaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatc 135399 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135398 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 135339 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135338 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 135279 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgca 300 ||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||| Sbjct: 135278 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgca 135219 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 360 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 135218 ccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 135159 Query: 361 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135158 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 135099 Query: 421 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 480 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 135098 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 135039 Query: 481 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 540 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 135038 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ct 134984 Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 134983 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 134943 Score = 852 bits (430), Expect = 0.0 Identities = 547/581 (94%), Gaps = 8/581 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| Sbjct: 105520 cctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttga 105578 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||||| Sbjct: 105579 aaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatc 105637 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105638 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 105697 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105698 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 105757 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgca 300 ||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||| Sbjct: 105758 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgca 105817 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 360 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 105818 ccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 105877 Query: 361 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105878 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 105937 Query: 421 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 480 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 105938 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 105997 Query: 481 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 540 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 105998 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ct 106052 Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106053 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 106093
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 852 bits (430), Expect = 0.0 Identities = 547/581 (94%), Gaps = 8/581 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| Sbjct: 135651 cctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttga 135593 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||||| Sbjct: 135592 aaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatc 135534 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135533 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 135474 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135473 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 135414 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgca 300 ||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||| Sbjct: 135413 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgca 135354 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 360 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 135353 ccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 135294 Query: 361 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135293 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 135234 Query: 421 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 480 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 135233 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 135174 Query: 481 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 540 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 135173 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ct 135119 Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135118 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 135078 Score = 852 bits (430), Expect = 0.0 Identities = 547/581 (94%), Gaps = 8/581 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| Sbjct: 105692 cctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttga 105750 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||||| Sbjct: 105751 aaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatc 105809 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105810 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 105869 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105870 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 105929 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgca 300 ||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||| Sbjct: 105930 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgca 105989 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 360 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 105990 ccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 106049 Query: 361 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106050 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 106109 Query: 421 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 480 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 106110 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 106169 Query: 481 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 540 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 106170 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ct 106224 Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106225 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 106265
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 852 bits (430), Expect = 0.0 Identities = 547/581 (94%), Gaps = 8/581 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| Sbjct: 135649 cctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttga 135591 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||||| Sbjct: 135590 aaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatc 135532 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135531 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 135472 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135471 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 135412 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgca 300 ||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||| Sbjct: 135411 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgca 135352 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 360 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 135351 ccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 135292 Query: 361 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135291 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 135232 Query: 421 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 480 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 135231 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 135172 Query: 481 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 540 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 135171 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ct 135117 Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135116 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 135076 Score = 852 bits (430), Expect = 0.0 Identities = 547/581 (94%), Gaps = 8/581 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| Sbjct: 105689 cctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttga 105747 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||||| Sbjct: 105748 aaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatc 105806 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105807 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 105866 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105867 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 105926 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgca 300 ||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||| Sbjct: 105927 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgca 105986 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 360 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 105987 ccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 106046 Query: 361 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106047 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 106106 Query: 421 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 480 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 106107 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 106166 Query: 481 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 540 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 106167 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ct 106221 Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106222 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 106262
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 852 bits (430), Expect = 0.0 Identities = 547/581 (94%), Gaps = 8/581 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| Sbjct: 135561 cctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttga 135503 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||||| Sbjct: 135502 aaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatc 135444 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135443 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 135384 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135383 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 135324 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgca 300 ||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||| Sbjct: 135323 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgca 135264 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 360 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 135263 ccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 135204 Query: 361 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135203 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 135144 Query: 421 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 480 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 135143 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 135084 Query: 481 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 540 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 135083 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ct 135029 Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135028 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 134988 Score = 852 bits (430), Expect = 0.0 Identities = 547/581 (94%), Gaps = 8/581 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| Sbjct: 105567 cctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttga 105625 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||||| Sbjct: 105626 aaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatc 105684 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105685 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 105744 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105745 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 105804 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgca 300 ||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||| Sbjct: 105805 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgca 105864 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 360 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 105865 ccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 105924 Query: 361 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105925 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 105984 Query: 421 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 480 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 105985 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 106044 Query: 481 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 540 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 106045 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ct 106099 Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106100 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 106140
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 852 bits (430), Expect = 0.0 Identities = 547/581 (94%), Gaps = 8/581 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| Sbjct: 136268 cctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttga 136210 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||||| Sbjct: 136209 aaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatc 136151 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136150 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 136091 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136090 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 136031 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgca 300 ||||||||||||||||||||||||||| ||||||||||||||||| | || ||| ||| Sbjct: 136030 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgca 135971 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 360 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135970 ccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 135911 Query: 361 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135910 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 135851 Query: 421 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 480 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 135850 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 135791 Query: 481 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 540 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 135790 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ct 135736 Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135735 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 135695 Score = 852 bits (430), Expect = 0.0 Identities = 547/581 (94%), Gaps = 8/581 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| Sbjct: 106358 cctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttga 106416 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||||| Sbjct: 106417 aaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatc 106475 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106476 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 106535 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106536 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 106595 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgca 300 ||||||||||||||||||||||||||| ||||||||||||||||| | || ||| ||| Sbjct: 106596 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgca 106655 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 360 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106656 ccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 106715 Query: 361 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106716 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 106775 Query: 421 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 480 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 106776 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 106835 Query: 481 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 540 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 106836 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ct 106890 Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106891 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 106931
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 848 bits (428), Expect = 0.0 Identities = 545/580 (93%), Gaps = 6/580 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 106035 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgc 106093 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||| Sbjct: 106094 aaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatc 106152 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106153 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 106212 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106213 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 106272 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||||| || ||||| |||| Sbjct: 106273 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgttgcac 106332 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 |||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 106333 cctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 106392 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106393 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 106452 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 ||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 106453 ctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 106512 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 ||||||||||||| |||||||| | |||| ||||||||||||||| | | | | ||| Sbjct: 106513 agtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag-acgaggactc 106568 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||| Sbjct: 106569 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 106608 Score = 799 bits (403), Expect = 0.0 Identities = 544/583 (93%), Gaps = 9/583 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 135874 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgc 135816 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||| Sbjct: 135815 aaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatc 135757 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135756 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 135697 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135696 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 135637 Query: 242 ggggttgtgggagagc-aatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 300 |||||||||||||||| ||||||||||| ||||||||||||||||| || ||||| ||| Sbjct: 135636 ggggttgtgggagagcaaatacaagcgtcgtgctgctaggcgaagcagtggagtgttgca 135577 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatg-ctctgacccgagt 359 ||||||||||| | |||||||||||||||||||||||||||||| | | ||||||||||| Sbjct: 135576 ccctagatggcgagagtccagtagccgaaagcatcactagcttacgcccctgacccgagt 135517 Query: 360 agcatggggcacgtggaatcccgtgtgaatcag-caaggaccaccttgcaaggctaaata 418 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 135516 agcatggggcacgtggaatcccgtgtgaatcagccaaggaccaccttgcaaggctaaata 135457 Query: 419 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 478 |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 135456 ctcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 135397 Query: 479 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 538 || ||||||||||||| |||||||| | |||| ||||||||||||||| | | | | Sbjct: 135396 gggagtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag-acgagga 135341 Query: 539 ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135340 ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 135298
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 848 bits (428), Expect = 0.0 Identities = 544/580 (93%), Gaps = 5/580 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 31 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctga 89 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||| ||| |||||||| |||||| |||||||| Sbjct: 90 aaataagcatagatccggagattcccgaatgggttaaccttttgaactgc-tgctgaatt 148 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149 cataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 208 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 209 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaac 268 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||| ||| |||||| ||||||||||||||||||||| |||||| Sbjct: 269 ggggttgtgggagagcaatataagtgttgtgttgctaggcgaagcggttgagtcccgcac 328 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 || |||||| | |||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 329 cccagatggtgagagtccagtagccgaaagcatcactagcttacgctctaacccgagtag 388 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 448 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 449 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggg 508 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 ||||||||||||| |||||||| | |||||||||||||||||||| ||| |||||| Sbjct: 509 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcggatctc 565 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||| |||| Sbjct: 566 tgaccgcgtgcctgttgaagaatgagccggcgacttatag 605
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 848 bits (428), Expect = 0.0 Identities = 545/580 (93%), Gaps = 6/580 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 136150 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgc 136092 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||| Sbjct: 136091 aaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatc 136033 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136032 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 135973 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135972 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 135913 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||||| || ||||| |||| Sbjct: 135912 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgttgcac 135853 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 |||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 135852 cctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 135793 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135792 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 135733 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 ||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 135732 ctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 135673 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 ||||||||||||| |||||||| | |||| ||||||||||||||| | | | | ||| Sbjct: 135672 agtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag-acgaggactc 135617 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||| Sbjct: 135616 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 135577 Score = 848 bits (428), Expect = 0.0 Identities = 545/580 (93%), Gaps = 6/580 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 106257 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgc 106315 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||| Sbjct: 106316 aaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatc 106374 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106375 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 106434 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106435 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 106494 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||||| || ||||| |||| Sbjct: 106495 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgttgcac 106554 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 |||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 106555 cctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 106614 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106615 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 106674 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 ||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 106675 ctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 106734 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 ||||||||||||| |||||||| | |||| ||||||||||||||| | | | | ||| Sbjct: 106735 agtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag-acgaggactc 106790 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||| Sbjct: 106791 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 106830
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 844 bits (426), Expect = 0.0 Identities = 546/581 (93%), Gaps = 8/581 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| Sbjct: 135999 cctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttga 135941 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||| ||||||| |||||| |||||||| |||||| ||||||||| Sbjct: 135940 aaataagcatagatccggggattcccgaatagggcaacctttcgaactgc-tgctgaatc 135882 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135881 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 135822 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135821 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 135762 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgca 300 ||||||||||||||||||||||||||| ||||||||||||||||| | || ||| ||| Sbjct: 135761 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgca 135702 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 360 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135701 ccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 135642 Query: 361 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135641 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 135582 Query: 421 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 480 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 135581 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 135522 Query: 481 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 540 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 135521 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ct 135467 Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135466 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 135426 Score = 844 bits (426), Expect = 0.0 Identities = 546/581 (93%), Gaps = 8/581 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| Sbjct: 106139 cctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttga 106197 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||| ||||||| |||||| |||||||| |||||| ||||||||| Sbjct: 106198 aaataagcatagatccggggattcccgaatagggcaacctttcgaactgc-tgctgaatc 106256 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106257 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 106316 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106317 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 106376 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgca 300 ||||||||||||||||||||||||||| ||||||||||||||||| | || ||| ||| Sbjct: 106377 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgca 106436 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 360 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106437 ccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 106496 Query: 361 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106497 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 106556 Query: 421 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 480 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 106557 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 106616 Query: 481 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 540 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 106617 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ct 106671 Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106672 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 106712
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 844 bits (426), Expect = 0.0 Identities = 546/581 (93%), Gaps = 8/581 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| Sbjct: 135528 cctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttga 135470 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||||| Sbjct: 135469 aaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatc 135411 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135410 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 135351 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135350 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 135291 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgca 300 ||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||| Sbjct: 135290 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgca 135231 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 360 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 135230 ccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 135171 Query: 361 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135170 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 135111 Query: 421 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 480 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 135110 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 135051 Query: 481 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 540 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 135050 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ct 134996 Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||| |||| Sbjct: 134995 ctgaccgcgtgcctgttgaagaatgagccggcgactaatag 134955 Score = 844 bits (426), Expect = 0.0 Identities = 546/581 (93%), Gaps = 8/581 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| Sbjct: 105534 cctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttga 105592 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||||| Sbjct: 105593 aaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatc 105651 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105652 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 105711 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105712 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 105771 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgca 300 ||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||| Sbjct: 105772 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgca 105831 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 360 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 105832 ccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 105891 Query: 361 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105892 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 105951 Query: 421 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 480 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 105952 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 106011 Query: 481 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 540 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 106012 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ct 106066 Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||| |||| Sbjct: 106067 ctgaccgcgtgcctgttgaagaatgagccggcgactaatag 106107
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 842 bits (425), Expect = 0.0 Identities = 546/581 (93%), Gaps = 7/581 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 30 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 88 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||| Sbjct: 89 aaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatc 147 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 148 catgggcaggcaagagacaacctaacgaactgaaacatcttagtagccagaggaaaagaa 207 Query: 182 agcaaaagcgattcccgtagtagc-ggcgagcgaaatgggagcagcctaaaccgtgaaaa 240 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 208 agcaaaagcgattcccgtagtagcaggcgagcgaaatgggagcagcctaaaccgtgaaaa 267 Query: 241 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 300 |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| | Sbjct: 268 cggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgaagtgccgaa 327 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 360 ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 328 ccctagatggctagagtccagtagccgaaagcatcactagcttacgctctgacccgagta 387 Query: 361 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 447 Query: 421 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 480 |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 448 cctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccaccggg 507 Query: 481 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 540 ||||||||||||| |||||||| | |||||||||||||||||||| | | | || Sbjct: 508 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcctg-gggct 563 Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 564 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 604
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 833 bits (420), Expect = 0.0 Identities = 543/580 (93%), Gaps = 6/580 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| ||||||||||||||| || |||||||||||||||||||||||| Sbjct: 131761 cctaggcacccagag-acgaggaagggcgtattaatcgacgaaatgcttcggggagttga 131703 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||||| |||||||||||||||| ||||||||||||||| |||| | ||||||||| Sbjct: 131702 aaataagcagagatccggagattcccgaataggtcaacctttcgaacttc-tgctgaatc 131644 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131643 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 131584 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131583 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 131524 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||| | || |||||| | || Sbjct: 131523 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatcagtggagtgcggaac 131464 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131463 cctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 131404 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131403 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 131344 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 131343 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 131284 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 ||||||||||||| |||||||| | ||||| |||||||||||||||| | || | | Sbjct: 131283 agtgaaatagaacatgaaaccg---taagctctcaagcagtgggagggggaccaga-ccc 131228 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||| Sbjct: 131227 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 131188 Score = 833 bits (420), Expect = 0.0 Identities = 543/580 (93%), Gaps = 6/580 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| ||||||||||||||| || |||||||||||||||||||||||| Sbjct: 101684 cctaggcacccagag-acgaggaagggcgtattaatcgacgaaatgcttcggggagttga 101742 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||||| |||||||||||||||| ||||||||||||||| |||| | ||||||||| Sbjct: 101743 aaataagcagagatccggagattcccgaataggtcaacctttcgaacttc-tgctgaatc 101801 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101802 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 101861 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101862 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 101921 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||| | || |||||| | || Sbjct: 101922 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatcagtggagtgcggaac 101981 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101982 cctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 102041 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102042 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 102101 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 102102 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 102161 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 ||||||||||||| |||||||| | ||||| |||||||||||||||| | || | | Sbjct: 102162 agtgaaatagaacatgaaaccg---taagctctcaagcagtgggagggggaccaga-ccc 102217 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||| Sbjct: 102218 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 102257
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 829 bits (418), Expect = 0.0 Identities = 544/581 (93%), Gaps = 8/581 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 139474 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 139416 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| ||||||||||||||||| ||||||||||||||| |||||| ||||||||| Sbjct: 139415 aaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatc 139357 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 139356 catgggcagacaagagacaacctggcgaactgaaacatcttagtagccggaggaaaagaa 139297 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139296 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 139237 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||| |||||| |||||||||||||||||||| ||||||| || Sbjct: 139236 ggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaagtgccgaac 139177 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 |||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 139176 cctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 139117 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139116 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 139057 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 139056 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccgtcgggg 138997 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtgatct 540 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 138996 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccaggg--ct 138942 Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 138941 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 138901 Score = 829 bits (418), Expect = 0.0 Identities = 544/581 (93%), Gaps = 8/581 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 109623 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 109681 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| ||||||||||||||||| ||||||||||||||| |||||| ||||||||| Sbjct: 109682 aaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatc 109740 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 109741 catgggcagacaagagacaacctggcgaactgaaacatcttagtagccggaggaaaagaa 109800 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109801 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 109860 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||| |||||| |||||||||||||||||||| ||||||| || Sbjct: 109861 ggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaagtgccgaac 109920 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 |||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 109921 cctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 109980 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109981 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 110040 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 110041 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccgtcgggg 110100 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtgatct 540 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 110101 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccaggg--ct 110155 Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 110156 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 110196
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 829 bits (418), Expect = 0.0 Identities = 545/581 (93%), Gaps = 9/581 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| Sbjct: 5 cctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttga 63 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||||| Sbjct: 64 aaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatc 122 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 182 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 242 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgca 300 ||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||| Sbjct: 243 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgca 302 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 360 ||| | ||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 303 ccc-atatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 361 Query: 361 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 Query: 421 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 480 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 481 Query: 481 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 540 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 482 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ct 536 Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 537 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 577
>dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G06, full insert sequence Length = 1707 Score = 829 bits (418), Expect = 0.0 Identities = 424/426 (99%) Strand = Plus / Plus Query: 61 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1 aaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaat 60 Query: 121 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 120 Query: 181 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 180 Query: 241 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 240 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 360 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 241 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 300 Query: 361 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 360 Query: 421 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 420 Query: 481 tagtga 486 |||||| Sbjct: 421 tagtga 426
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 825 bits (416), Expect = 0.0 Identities = 545/583 (93%), Gaps = 8/583 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 139683 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 139625 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| ||||||||||||||||| ||||||||||||||| |||||| ||||||||| Sbjct: 139624 aaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatc 139566 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139565 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 139506 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139505 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 139446 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgca 300 ||||||||||||||||||||||||||| ||||||||||||||||| || || ||| ||| Sbjct: 139445 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgcgaatgctgca 139386 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 360 |||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 139385 ccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctgacccgagta 139326 Query: 361 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139325 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 139266 Query: 421 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 480 ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 139265 cctgggtgacccatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 139206 Query: 481 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga--aagtgat 538 ||||||||||||| |||||||| | |||||||||||||||||||| || | | Sbjct: 139205 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagactactagga 139149 Query: 539 ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139148 ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 139106 Score = 825 bits (416), Expect = 0.0 Identities = 545/583 (93%), Gaps = 8/583 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 109616 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 109674 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| ||||||||||||||||| ||||||||||||||| |||||| ||||||||| Sbjct: 109675 aaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatc 109733 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109734 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 109793 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109794 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 109853 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgca 300 ||||||||||||||||||||||||||| ||||||||||||||||| || || ||| ||| Sbjct: 109854 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgcgaatgctgca 109913 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 360 |||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 109914 ccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctgacccgagta 109973 Query: 361 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109974 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 110033 Query: 421 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 480 ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 110034 cctgggtgacccatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 110093 Query: 481 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga--aagtgat 538 ||||||||||||| |||||||| | |||||||||||||||||||| || | | Sbjct: 110094 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagactactagga 110150 Query: 539 ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110151 ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 110193
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 823 bits (415), Expect = 0.0 Identities = 501/527 (95%), Gaps = 5/527 (0%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 130505 cctaggcacccagag-acgaggaggggcgtagtaagcgacgaaatgcttcggggagttga 130447 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||||||||||||||| |||| | ||||||||| Sbjct: 130446 aaataagcatagatccggagattcccgaataggtcaacctttcgaactac-tgctgaatc 130388 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130387 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 130328 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130327 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 130268 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 130267 ggggttgtgggagagctatacaagcgtcgtgctgctaggcgaagcggtggagtgccgcac 130208 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130207 cctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 130148 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130147 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 130088 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 ||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 130087 ctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 130028 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 528 ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 130027 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 129984 Score = 823 bits (415), Expect = 0.0 Identities = 501/527 (95%), Gaps = 5/527 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 101951 cctaggcacccagag-acgaggaggggcgtagtaagcgacgaaatgcttcggggagttga 102009 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||||||||||||||| |||| | ||||||||| Sbjct: 102010 aaataagcatagatccggagattcccgaataggtcaacctttcgaactac-tgctgaatc 102068 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102069 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 102128 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102129 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 102188 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 102189 ggggttgtgggagagctatacaagcgtcgtgctgctaggcgaagcggtggagtgccgcac 102248 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102249 cctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 102308 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102309 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 102368 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 ||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 102369 ctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 102428 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 528 ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 102429 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 102472 Score = 85.7 bits (43), Expect = 1e-13 Identities = 43/43 (100%) Strand = Plus / Minus Query: 539 ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129969 ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 129927 Score = 85.7 bits (43), Expect = 1e-13 Identities = 43/43 (100%) Strand = Plus / Plus Query: 539 ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102487 ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 102529
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 815 bits (411), Expect = 0.0 Identities = 500/527 (94%), Gaps = 5/527 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 38 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 96 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||| Sbjct: 97 aaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatc 155 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 156 catgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaa 215 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 216 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 275 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||| Sbjct: 276 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcac 335 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 |||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 336 cctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 395 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 396 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 455 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||| Sbjct: 456 ctgggtgaccgatagcgaagtactaccgtgagggaagggtgaaaagaacccccatcgggg 515 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 528 ||||||||| ||| |||||||| | |||||||||||||||||||| Sbjct: 516 agtgaaataaaacatgaaaccg---taagctcccaagcagtgggagg 559
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 815 bits (411), Expect = 0.0 Identities = 500/527 (94%), Gaps = 5/527 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 38 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 96 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||| Sbjct: 97 aaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatc 155 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 156 catgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaa 215 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 216 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 275 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||| Sbjct: 276 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcac 335 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 |||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 336 cctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 395 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 396 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 455 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||| ||||||||||||| ||||||||||||||||| || Sbjct: 456 ctgggtgaccgatagcgaagtactaccgtgagggaagggtgaaaagaacccccatccggg 515 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 528 ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 516 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 539 ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||| ||||||||||||||||||| | |||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaagaattaaccggcgactcatag 623
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 807 bits (407), Expect = 0.0 Identities = 499/527 (94%), Gaps = 5/527 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||| |||||||||| || |||||||||||||||||||||||| Sbjct: 46282 cctaggcacccagag-acgaagaagggcgtattaatcgacgaaatgcttcggggagttga 46340 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||| Sbjct: 46341 aaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatc 46399 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 46400 catgggcaggcaagagacaacctggcgaactgaaacatcttactagccagaggaaaagaa 46459 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 46460 agcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaac 46519 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||| Sbjct: 46520 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtaccgcac 46579 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46580 cctagatggctagagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 46639 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46640 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 46699 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 46700 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 46759 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 528 ||||||||||||| |||||||| | ||||| |||||||||||||| Sbjct: 46760 agtgaaatagaacatgaaaccg---taagctctcaagcagtgggagg 46803 Score = 85.7 bits (43), Expect = 1e-13 Identities = 43/43 (100%) Strand = Plus / Plus Query: 539 ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46818 ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 46860
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 807 bits (407), Expect = 0.0 Identities = 499/527 (94%), Gaps = 5/527 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 38 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 96 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||| Sbjct: 97 aaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatc 155 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 156 catgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaa 215 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 216 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 275 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||| Sbjct: 276 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcac 335 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 |||||||||| | ||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 336 cctagatggcgagagtccagtagccgaaagcatccctagcttacgctctgacccgagtag 395 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 396 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 455 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||| ||||||||||||| ||||||||||||||||| || Sbjct: 456 ctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccccatccggg 515 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 528 ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 516 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 539 ctctgaccgcgtgcctgttgaagaatga 566 |||||| ||||||||||||||| ||||| Sbjct: 581 ctctgaacgcgtgcctgttgaaaaatga 608
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 807 bits (407), Expect = 0.0 Identities = 499/527 (94%), Gaps = 5/527 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 38 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 96 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||| Sbjct: 97 aaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatc 155 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 156 catgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaa 215 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 216 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 275 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||| Sbjct: 276 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcac 335 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 |||||||||| | ||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 336 cctagatggcgagagtccagtagccgaaagcatccctagcttacgctctgacccgagtag 395 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 396 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 455 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||| Sbjct: 456 ctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccccatcgggg 515 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 528 ||||||||| ||| |||||||| | |||||||||||||||||||| Sbjct: 516 agtgaaataaaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 46.1 bits (23), Expect = 0.13 Identities = 39/43 (90%), Gaps = 1/43 (2%) Strand = Plus / Plus Query: 539 ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||| |||||||||||| || |||||||| ||||||||||| Sbjct: 581 ctctgaacgcgtgcctgtttaaaaatgagcc-gcgactcatag 622
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 807 bits (407), Expect = 0.0 Identities = 499/527 (94%), Gaps = 5/527 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||| Sbjct: 38 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggggttga 96 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||| Sbjct: 97 aaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatc 155 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 156 catgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaa 215 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 216 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 275 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||| Sbjct: 276 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcac 335 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 |||||||||| | ||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 336 cctagatggcgagagtccagtagccgaaagcatccctagcttacgctctgacccgagtag 395 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 396 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 455 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||| Sbjct: 456 ctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccccatcgggg 515 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 528 ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 516 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 61.9 bits (31), Expect = 2e-06 Identities = 41/43 (95%), Gaps = 1/43 (2%) Strand = Plus / Plus Query: 539 ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaa-aatgagccggcgactcatag 622
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 805 bits (406), Expect = 0.0 Identities = 541/581 (93%), Gaps = 8/581 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 142849 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 142791 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| |||||||||||||||| ||| ||||||||||| |||||| ||||||||| Sbjct: 142790 aaataagcgcagatccggagattcccgaatgggtcaacctttcgaactgc-tgctgaatc 142732 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142731 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 142672 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142671 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 142612 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg-agtgccgca 300 ||||||||||||||| |||||||||| ||||||||||||||||| | || ||||| ||| Sbjct: 142611 ggggttgtgggagagtcatacaagcgtcgtgctgctaggcgaagcagctggagtgctgca 142552 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 360 |||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 142551 ccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctgacccgagta 142492 Query: 361 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 420 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 142491 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatact 142432 Query: 421 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 480 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 142431 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 142372 Query: 481 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 540 ||||||||||||| |||||||| | ||||||||||||||||||| | || | || Sbjct: 142371 gagtgaaatagaacatgaaaccg---taggctcccaagcagtgggaggagccaggg--ct 142317 Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 142316 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 142276 Score = 805 bits (406), Expect = 0.0 Identities = 541/581 (93%), Gaps = 8/581 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 110479 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 110537 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| |||||||||||||||| ||| ||||||||||| |||||| ||||||||| Sbjct: 110538 aaataagcgcagatccggagattcccgaatgggtcaacctttcgaactgc-tgctgaatc 110596 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110597 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 110656 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110657 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 110716 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg-agtgccgca 300 ||||||||||||||| |||||||||| ||||||||||||||||| | || ||||| ||| Sbjct: 110717 ggggttgtgggagagtcatacaagcgtcgtgctgctaggcgaagcagctggagtgctgca 110776 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 360 |||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 110777 ccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctgacccgagta 110836 Query: 361 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 420 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 110837 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatact 110896 Query: 421 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 480 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 110897 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 110956 Query: 481 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 540 ||||||||||||| |||||||| | ||||||||||||||||||| | || | || Sbjct: 110957 gagtgaaatagaacatgaaaccg---taggctcccaagcagtgggaggagccaggg--ct 111011 Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 111012 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 111052
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 803 bits (405), Expect = 0.0 Identities = 539/580 (92%), Gaps = 7/580 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 4261 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 4319 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||||||||||||| ||||||| ||||||||||||||| |||||| |||||||| Sbjct: 4320 aaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-tgctgaatt 4378 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4379 cacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 4438 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 4439 agcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaac 4498 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||| ||||||||||||| | || || |||| Sbjct: 4499 ggggttgtgggagagcaatacaagcgtcgtgttgctaggcgaagcaatcgaatgttgcac 4558 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4559 cctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 4618 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4619 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 4678 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 4679 ctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctgtcgggg 4738 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 ||||||||||||| |||||||| | |||||||||||||||||||| | | | ||| Sbjct: 4739 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagctgggg--ctc 4793 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||| Sbjct: 4794 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 4833
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 803 bits (405), Expect = 0.0 Identities = 539/580 (92%), Gaps = 7/580 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 23664 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 23606 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||||||||||||| ||||||| ||||||||||||||| |||||| |||||||| Sbjct: 23605 aaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-tgctgaatt 23547 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23546 cacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 23487 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 23486 agcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaac 23427 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||| ||||||||||||| | || || |||| Sbjct: 23426 ggggttgtgggagagcaatacaagcgtcgtgttgctaggcgaagcaatcgaatgttgcac 23367 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23366 cctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 23307 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23306 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 23247 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 23246 ctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctgtcgggg 23187 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 ||||||||||||| |||||||| | |||||||||||||||||||| | | | ||| Sbjct: 23186 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagctgggg--ctc 23132 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||| Sbjct: 23131 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 23092
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 803 bits (405), Expect = 0.0 Identities = 540/580 (93%), Gaps = 8/580 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 4530 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 4588 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||||||||||||| ||||||| ||||||||||||||| |||||| |||||||| Sbjct: 4589 aaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-tgctgaatt 4647 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4648 cacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 4707 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4708 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 4767 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||||| || || || |||| Sbjct: 4768 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtcgaatgttgcac 4827 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4828 cctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtaa 4887 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4888 catggggcacgtgaaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 4947 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 ||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||| Sbjct: 4948 ctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctggcgggg 5007 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 ||||||||||||| |||||||| | ||||||||| |||||||||| | | | ||| Sbjct: 5008 agtgaaatagaacatgaaaccg---taagctcccaa-cagtgggaggagctgggg--ctc 5061 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||| Sbjct: 5062 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 5101
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 803 bits (405), Expect = 0.0 Identities = 540/580 (93%), Gaps = 8/580 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 4530 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 4588 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||||||||||||| ||||||| ||||||||||||||| |||||| |||||||| Sbjct: 4589 aaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-tgctgaatt 4647 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4648 cacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 4707 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4708 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 4767 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||||| || || || |||| Sbjct: 4768 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtcgaatgttgcac 4827 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4828 cctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtaa 4887 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4888 catggggcacgtgaaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 4947 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 ||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||| Sbjct: 4948 ctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctggcgggg 5007 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 ||||||||||||| |||||||| | ||||||||| |||||||||| | | | ||| Sbjct: 5008 agtgaaatagaacatgaaaccg---taagctcccaa-cagtgggaggagctgggg--ctc 5061 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||| Sbjct: 5062 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 5101
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 799 bits (403), Expect = 0.0 Identities = 540/582 (92%), Gaps = 7/582 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 86292 cctaggcacccagag-acgaggaagggcgtggtaagcgacgaaatgcttcggggagttga 86350 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||| ||||||||||||||||||||| ||||||| |||| ||| |||||| ||||||||| Sbjct: 86351 aaatgagcatagatccggagattcccgaataggttaacccttttaactgc-tgctgaatc 86409 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 86410 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaatagaa 86469 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 86470 agcaaaagcgattcccgtagtagtggcgagcgaaatgggagcagcctaaaccgtgaaaac 86529 Query: 242 ggggttgtgggagagc--aatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 299 |||||||||||||||| |||| |||| |||||||||||||||||||||||||| | || Sbjct: 86530 ggggttgtgggagagcccaatataagctctgtgctgctaggcgaagcggttgagtcctgc 86589 Query: 300 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 359 ||||||||||| | |||||||||||||||||||||| | ||||| ||||| |||||||| Sbjct: 86590 accctagatggtgagagtccagtagccgaaagcatcattggcttacgctctaacccgagt 86649 Query: 360 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86650 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 86709 Query: 420 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 86710 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgg 86769 Query: 480 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 539 | ||||||||||||| |||||||| | |||||||||||||||||||| || |||| Sbjct: 86770 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaaaattagatc 86826 Query: 540 tctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 86827 tctgaccgcgtgcctgttgaagaatgagccggcgacttatag 86868
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 799 bits (403), Expect = 0.0 Identities = 540/582 (92%), Gaps = 7/582 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 88378 cctaggcacccagag-acgaggaagggcgtggtaagcgacgaaatgcttcggggagttga 88436 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||| ||||||||||||||||||||| ||||||| |||||||| ||||| ||||||||| Sbjct: 88437 aaattagcatagatccggagattcccgaataggttaacctttttcactgc-tgctgaatc 88495 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||| Sbjct: 88496 catgggcaggcaagagacaacctggtgaactgaaacatcttagtagccagaggaatagaa 88555 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88556 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 88615 Query: 242 ggggttgtgggagagca--atacaagcgttgtgctgctaggcgaagcggttgagtgccgc 299 ||||||||||||||||| ||| |||| |||||||||||||||||||||||||| | || Sbjct: 88616 ggggttgtgggagagcacaatataagctctgtgctgctaggcgaagcggttgagtcctgc 88675 Query: 300 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 359 ||||||||||| | |||||||||||||||||||||| | ||||| ||||| |||||||| Sbjct: 88676 accctagatggtgagagtccagtagccgaaagcatcattggcttacgctctaacccgagt 88735 Query: 360 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88736 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 88795 Query: 420 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 88796 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgg 88855 Query: 480 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 539 | ||||||||||||| |||||||| | |||||||||||||||||||| || |||| Sbjct: 88856 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaaaattagatc 88912 Query: 540 tctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 88913 tctgaccgcgtgcctgttgaagaatgagccggcgacttatag 88954
>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence Length = 640 Score = 793 bits (400), Expect = 0.0 Identities = 528/566 (93%), Gaps = 8/566 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 79 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 137 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| ||||||||||||||||| ||||||||||||||| |||||| ||||||||| Sbjct: 138 aaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatc 196 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 197 catgggcagacaagagacaacctggcgaactgaaacatcttagtagccggaggaaaagaa 256 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 316 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||| |||||| |||||||||||||||||||| ||||||| || Sbjct: 317 ggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaagtgccgaac 376 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 |||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 377 cctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 436 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 496 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 497 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccgtcgggg 556 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtgatct 540 ||||||||||||| |||||||| | ||||||||||||| |||||| | || | || Sbjct: 557 agtgaaatagaacatgaaaccg---taagctcccaagcagngggaggagcccaggg--ct 611 Query: 541 ctgaccgcgtgcctgttgaagaatga 566 |||||||||||||||||||||||||| Sbjct: 612 ctgaccgcgtgcctgttgaagaatga 637
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 793 bits (400), Expect = 0.0 Identities = 544/583 (93%), Gaps = 11/583 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| || | |||||||||||||||||||||| Sbjct: 1797 cctaggcacccagag-acgaggaagggcgtagtaatc-acgaaatgcttcggggagttga 1854 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||||| Sbjct: 1855 aaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatc 1913 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1914 catgggcaggcaagagacaacctggcgaactgaaccatcttagtagccagaggaaaagaa 1973 Query: 182 agcaaaag-cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 240 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1974 agcaaaaggcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 2033 Query: 241 cggggttgtgggagagcaatacaagc-gttgtgctgctaggcgaagc-ggttgagtgccg 298 |||||||||||||||||||||||||| | ||||||||||||||||| | || ||| | Sbjct: 2034 cggggttgtgggagagcaatacaagcggccgtgctgctaggcgaagcagcccgaatgctg 2093 Query: 299 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 358 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2094 caccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 2153 Query: 359 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2154 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 2213 Query: 419 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 478 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 2214 ctcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 2273 Query: 479 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 538 || ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 2274 gggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg-- 2328 Query: 539 ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2329 ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 2371
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 791 bits (399), Expect = 0.0 Identities = 539/581 (92%), Gaps = 9/581 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| ||||||||||||||| || |||||||||||||||||||||||| Sbjct: 526 cctaggcacccagag-acgaggaagggcgtattaatcgacgaaatgcttcggggagttga 584 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| |||||||||||||||| |||||| |||||||| |||| | ||||||||| Sbjct: 585 aaataagccgagatccggagattcccgaatagggcaacctttcgaacttc-tgctgaatc 643 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 644 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 703 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 704 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 763 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||| | || |||||| | || Sbjct: 764 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtggagtgcggtac 823 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 824 cctagatggtgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 883 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 884 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 943 Query: 422 ctgggtgaccgatagcgaagtagta-ccgtgagggaaaggtgaaaagaacccccagtggg 480 |||||||||||||||| || ||||| ||||||||||||||||||||||||||||| ||| Sbjct: 944 ctgggtgaccgatagccaaatagtacccgtgagggaaaggtgaaaagaacccccatcggg 1003 Query: 481 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 540 ||||||||||||| |||||||| | ||||| |||||||||||||| || || || Sbjct: 1004 gagtgaaatagaacatgaaaccg---taagctctcaagcagtgggaggagacag---gct 1057 Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1058 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 1098
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 791 bits (399), Expect = 0.0 Identities = 402/403 (99%) Strand = Plus / Plus Query: 179 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 60 Query: 239 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 120 Query: 299 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 358 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 121 caccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgag 180 Query: 359 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 240 Query: 419 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 300 Query: 479 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 360 Query: 539 ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 403
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 787 bits (397), Expect = 0.0 Identities = 400/401 (99%) Strand = Plus / Plus Query: 181 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 241 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 360 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 361 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 421 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 481 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360 Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 401
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 787 bits (397), Expect = 0.0 Identities = 400/401 (99%) Strand = Plus / Plus Query: 181 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 241 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 360 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 361 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 421 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 481 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360 Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 401
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 785 bits (396), Expect = 0.0 Identities = 399/400 (99%) Strand = Plus / Plus Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 180 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 400
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 785 bits (396), Expect = 0.0 Identities = 399/400 (99%) Strand = Plus / Plus Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 63 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 123 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 124 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 183 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 243 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 303 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 363 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||| Sbjct: 364 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 403
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 781 bits (394), Expect = 0.0 Identities = 397/398 (99%) Strand = Plus / Plus Query: 184 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 60 Query: 244 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 120 Query: 304 tagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 363 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 121 tagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagca 180 Query: 364 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 240 Query: 424 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 300 Query: 484 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 360 Query: 544 accgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 361 accgcgtgcctgttgaagaatgagccggcgactcatag 398
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 779 bits (393), Expect = 0.0 Identities = 535/579 (92%), Gaps = 8/579 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| ||||||||||||||| || |||||||||||||||||||||||| Sbjct: 38 cctaggcacccagag-acgaggaagggcgtattaatcgacgaaatgcttcggggagttga 96 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| |||||||||||||||| |||||| |||||||| |||| | ||||||||| Sbjct: 97 aaataagccgagatccggagattcccgaatagggcaacctttcgaacttc-tgctgaatc 155 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 156 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 215 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 216 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 275 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||| | || |||||| | || Sbjct: 276 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtggagtgcggtac 335 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 336 cctagatggtgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 395 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 396 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 455 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||| Sbjct: 456 ctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccccatcgggg 515 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 ||||||||| ||| |||||||| | ||||| |||||||||||||| || || ||| Sbjct: 516 agtgaaataaaacatgaaaccg---taagctctcaagcagtgggaggagacag---gctc 569 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcata 580 ||| ||||||||||||||| ||||||||||||||||||| Sbjct: 570 tgaacgcgtgcctgttgaaaaatgagccggcgactcata 608
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 779 bits (393), Expect = 0.0 Identities = 542/584 (92%), Gaps = 10/584 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 131841 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 131783 Query: 62 aaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcctgctgaat 120 |||||||| ||||||||| ||||||| | |||||||||||||| |||||| |||||||| Sbjct: 131782 aaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc-tgctgaat 131724 Query: 121 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 180 ||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 131723 ccacgggcaggcaagagacaacctggtgaactgaaacatcttagtagccagaggaaaaga 131664 Query: 181 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131663 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 131604 Query: 241 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag--tgccg 298 ||||||||||||||||| ||||||| || ||||||||||||||||| | ||| ||| | Sbjct: 131603 cggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagagaatgctg 131544 Query: 299 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 358 ||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 131543 caccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgag 131484 Query: 359 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131483 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 131424 Query: 419 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 478 |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 131423 ctcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 131364 Query: 479 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtga 537 || ||||||||||||| |||||||| | |||||||||||||||||||| || | || Sbjct: 131363 gggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaggctcggga 131307 Query: 538 tctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131306 -ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 131264 Score = 779 bits (393), Expect = 0.0 Identities = 542/584 (92%), Gaps = 10/584 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 103553 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 103611 Query: 62 aaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcctgctgaat 120 |||||||| ||||||||| ||||||| | |||||||||||||| |||||| |||||||| Sbjct: 103612 aaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc-tgctgaat 103670 Query: 121 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 180 ||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 103671 ccacgggcaggcaagagacaacctggtgaactgaaacatcttagtagccagaggaaaaga 103730 Query: 181 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103731 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 103790 Query: 241 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag--tgccg 298 ||||||||||||||||| ||||||| || ||||||||||||||||| | ||| ||| | Sbjct: 103791 cggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagagaatgctg 103850 Query: 299 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 358 ||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 103851 caccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgag 103910 Query: 359 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103911 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 103970 Query: 419 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 478 |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 103971 ctcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 104030 Query: 479 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtga 537 || ||||||||||||| |||||||| | |||||||||||||||||||| || | || Sbjct: 104031 gggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaggctcggga 104087 Query: 538 tctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104088 -ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 104130
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 779 bits (393), Expect = 0.0 Identities = 541/582 (92%), Gaps = 13/582 (2%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| Sbjct: 130 cctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttga 188 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||||| Sbjct: 189 aaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatc 247 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagt-agccagaggaaaaga 180 |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 248 catgggcaggcaagagacaacctggcgaactgaaacatcttagtgagccagaggaaaaga 307 Query: 181 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 308 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 367 Query: 241 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag-cggttgagtgccgc 299 |||| ||||||||||||||||||||||| |||||||||||||||| || || ||| || Sbjct: 368 cggg-ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagacgcccgaatgctgc 426 Query: 300 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 359 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 427 accctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 486 Query: 360 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 419 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 487 agcatggggcacgtggaatcccgtgtgaatcgacaaggaccaccttgcaaggctaaatac 546 Query: 420 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 479 |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| || Sbjct: 547 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa-ccccatcgg 605 Query: 480 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 539 | ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 606 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggcca----gggc 658 Query: 540 tctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 659 tctgaccgcgtgcctgttgaagaatgagccggcgactcatag 700
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 765 bits (386), Expect = 0.0 Identities = 536/581 (92%), Gaps = 8/581 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||| |||| || |||||||||||||||||||||||| Sbjct: 52656 cctaggcacccagag-acgaggaaggatgtagtaatcgacgaaatgcttcggggagttga 52598 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| |||||| ||||||||| |||||| ||||||||| Sbjct: 52597 aaataagcatagatccggagattcccgaatagggcaaccttttgaactgc-tgctgaatc 52539 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 52538 catgggcagacaagagataacctggcgaactgaaacatcttagtagccagaggaaaagaa 52479 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 52478 agcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgcgaaaac 52419 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttgagtgccgca 300 |||||||||||||||||||| ||| || ||||||||||||||| | | |||| ||| ||| Sbjct: 52418 ggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttgaatgctgca 52359 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 360 ||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 52358 ccctagatggcgaaagtccagtagccgaaagcatcattagcttgtgctctgacccgagta 52299 Query: 361 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 420 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52298 gcatgggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 52239 Query: 421 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 480 ||||||| |||||||| ||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 52238 cctgggtaaccgatagttaagtagtaccgtgagggaagggtgaaaagaacccccattggg 52179 Query: 481 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 540 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 52178 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ct 52124 Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 52123 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 52083 Score = 765 bits (386), Expect = 0.0 Identities = 536/581 (92%), Gaps = 8/581 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||| |||| || |||||||||||||||||||||||| Sbjct: 37172 cctaggcacccagag-acgaggaaggatgtagtaatcgacgaaatgcttcggggagttga 37230 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| |||||| ||||||||| |||||| ||||||||| Sbjct: 37231 aaataagcatagatccggagattcccgaatagggcaaccttttgaactgc-tgctgaatc 37289 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 37290 catgggcagacaagagataacctggcgaactgaaacatcttagtagccagaggaaaagaa 37349 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 37350 agcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgcgaaaac 37409 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttgagtgccgca 300 |||||||||||||||||||| ||| || ||||||||||||||| | | |||| ||| ||| Sbjct: 37410 ggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttgaatgctgca 37469 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 360 ||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 37470 ccctagatggcgaaagtccagtagccgaaagcatcattagcttgtgctctgacccgagta 37529 Query: 361 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 420 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37530 gcatgggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 37589 Query: 421 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 480 ||||||| |||||||| ||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 37590 cctgggtaaccgatagttaagtagtaccgtgagggaagggtgaaaagaacccccattggg 37649 Query: 481 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 540 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 37650 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ct 37704 Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 37705 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 37745
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 765 bits (386), Expect = 0.0 Identities = 536/581 (92%), Gaps = 8/581 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||| |||| || |||||||||||||||||||||||| Sbjct: 4100 cctaggcacccagag-acgaggaaggatgtagtaatcgacgaaatgcttcggggagttga 4158 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| |||||| ||||||||| |||||| ||||||||| Sbjct: 4159 aaataagcatagatccggagattcccgaatagggcaaccttttgaactgc-tgctgaatc 4217 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 4218 catgggcagacaagagataacctggcgaactgaaacatcttagtagccagaggaaaagaa 4277 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 4278 agcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgcgaaaac 4337 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttgagtgccgca 300 |||||||||||||||||||| ||| || ||||||||||||||| | | |||| ||| ||| Sbjct: 4338 ggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttgaatgctgca 4397 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 360 ||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 4398 ccctagatggcgaaagtccagtagccgaaagcatcattagcttgtgctctgacccgagta 4457 Query: 361 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 420 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4458 gcatgggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 4517 Query: 421 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 480 ||||||| |||||||| ||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 4518 cctgggtaaccgatagttaagtagtaccgtgagggaagggtgaaaagaacccccattggg 4577 Query: 481 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 540 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 4578 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ct 4632 Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4633 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 4673
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 763 bits (385), Expect = 0.0 Identities = 525/570 (92%), Gaps = 10/570 (1%) Strand = Plus / Minus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 ||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||| Sbjct: 128401 acgaggaagggcgtagcaatcgacgaaatgcttcggggagctgaaaacaagcatagatcc 128342 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 |||||||||| ||||||| |||||||| |||||| |||||||| ||| ||||||||||| Sbjct: 128341 ggagattcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaagag 128283 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 128282 acaacctggcgaactgaaacatcttagtagccagaggaaaggaaagcaaacgcgattccc 128223 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||| Sbjct: 128222 gtagtagcggcgagcgaagtgggagtagcctaaaccgtgaaaacggggttgtgggggagc 128163 Query: 258 ------aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggc 311 ||||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 128162 gatacaaatacaagctttgtgctgctaggcgaagcggttgagtcccgcaccctagatggc 128103 Query: 312 taaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcac 371 | |||||||||||||||||||||||||||| | ||||| |||| ||||||||||||||| Sbjct: 128102 aagagtccagtagccgaaagcatcactagctcacgctctaacccaagtagcatggggcac 128043 Query: 372 gtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128042 gtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacc 127983 Query: 432 gatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatag 491 |||||||||| ||||||||||||||| ||||||||||||||||| ||| |||||||||| Sbjct: 127982 gatagcgaagcagtaccgtgagggaagggtgaaaagaacccccataggggagtgaaatag 127923 Query: 492 aacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtg 551 ||| |||||||| | |||||||||||||||||||| ||| ||||||||||||| || Sbjct: 127922 aacatgaaaccg---taagctcccaagcagtgggaggagaattggatctctgaccgcatg 127866 Query: 552 cctgttgaagaatgagccggcgactcatag 581 |||||||| ||||||||||||||||||||| Sbjct: 127865 cctgttgaggaatgagccggcgactcatag 127836 Score = 763 bits (385), Expect = 0.0 Identities = 525/570 (92%), Gaps = 10/570 (1%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 ||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||| Sbjct: 95046 acgaggaagggcgtagcaatcgacgaaatgcttcggggagctgaaaacaagcatagatcc 95105 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 |||||||||| ||||||| |||||||| |||||| |||||||| ||| ||||||||||| Sbjct: 95106 ggagattcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaagag 95164 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 95165 acaacctggcgaactgaaacatcttagtagccagaggaaaggaaagcaaacgcgattccc 95224 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||| Sbjct: 95225 gtagtagcggcgagcgaagtgggagtagcctaaaccgtgaaaacggggttgtgggggagc 95284 Query: 258 ------aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggc 311 ||||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 95285 gatacaaatacaagctttgtgctgctaggcgaagcggttgagtcccgcaccctagatggc 95344 Query: 312 taaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcac 371 | |||||||||||||||||||||||||||| | ||||| |||| ||||||||||||||| Sbjct: 95345 aagagtccagtagccgaaagcatcactagctcacgctctaacccaagtagcatggggcac 95404 Query: 372 gtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95405 gtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacc 95464 Query: 432 gatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatag 491 |||||||||| ||||||||||||||| ||||||||||||||||| ||| |||||||||| Sbjct: 95465 gatagcgaagcagtaccgtgagggaagggtgaaaagaacccccataggggagtgaaatag 95524 Query: 492 aacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtg 551 ||| |||||||| | |||||||||||||||||||| ||| ||||||||||||| || Sbjct: 95525 aacatgaaaccg---taagctcccaagcagtgggaggagaattggatctctgaccgcatg 95581 Query: 552 cctgttgaagaatgagccggcgactcatag 581 |||||||| ||||||||||||||||||||| Sbjct: 95582 cctgttgaggaatgagccggcgactcatag 95611
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 761 bits (384), Expect = 0.0 Identities = 534/580 (92%), Gaps = 6/580 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 116179 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctga 116121 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||| |||||||||||||||||| ||||||| ||||||| ||||||| |||||||| Sbjct: 116120 aaataagtatagatccggagattcccgaataggttaacctttgaaactgc-tgctgaatt 116062 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 116061 cataggcagacaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 116002 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 116001 agcaaaagcgattctcgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaac 115942 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||| ||||||| |||| | | ||| |||||| ||||||||||||| ||||||| | |||| Sbjct: 115941 ggg-ttgtgggggagctaaataagtgttgtgttgctaggcgaagcagttgagtcctgcac 115883 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 ||||||||| ||||||||||| ||||||||| |||||||||| ||||| |||||||||| Sbjct: 115882 cctagatggtgaaagtccagtaaccgaaagcagcactagcttaggctctaacccgagtag 115823 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 115822 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactc 115763 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 115762 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggg 115703 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 ||||||||||||| |||||||| | |||||||||||||||||||| ||| ||||| Sbjct: 115702 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaattgaatctc 115646 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||| |||| Sbjct: 115645 tgaccgcgtgcctgttgaagaatgagccggcgacttatag 115606 Score = 761 bits (384), Expect = 0.0 Identities = 534/580 (92%), Gaps = 6/580 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 85941 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctga 85999 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||| |||||||||||||||||| ||||||| ||||||| ||||||| |||||||| Sbjct: 86000 aaataagtatagatccggagattcccgaataggttaacctttgaaactgc-tgctgaatt 86058 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86059 cataggcagacaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 86118 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 86119 agcaaaagcgattctcgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaac 86178 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||| ||||||| |||| | | ||| |||||| ||||||||||||| ||||||| | |||| Sbjct: 86179 ggg-ttgtgggggagctaaataagtgttgtgttgctaggcgaagcagttgagtcctgcac 86237 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 ||||||||| ||||||||||| ||||||||| |||||||||| ||||| |||||||||| Sbjct: 86238 cctagatggtgaaagtccagtaaccgaaagcagcactagcttaggctctaacccgagtag 86297 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 86298 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactc 86357 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 86358 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggg 86417 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 ||||||||||||| |||||||| | |||||||||||||||||||| ||| ||||| Sbjct: 86418 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaattgaatctc 86474 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||| |||| Sbjct: 86475 tgaccgcgtgcctgttgaagaatgagccggcgacttatag 86514
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 755 bits (381), Expect = 0.0 Identities = 534/581 (91%), Gaps = 6/581 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 2074 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctga 2132 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||||||| |||||||| |||||| |||||||| Sbjct: 2133 aaataagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaatt 2191 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2192 cataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 2251 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 2252 agcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaaccgtgaaaac 2311 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||| | ||| ||||| ||||||||||||| ||||||| | |||| Sbjct: 2312 ggggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgagtcctgcac 2371 Query: 302 cctagatggctaaagtccagtagccgaaagcatcacta-gcttatgctctgacccgagta 360 ||||||||| | |||||||||||||||||||| || | || ||||||| ||||||||| Sbjct: 2372 cctagatggtgagagtccagtagccgaaagcataacaacactcatgctctaacccgagta 2431 Query: 361 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 420 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 2432 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatact 2491 Query: 421 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 480 |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 2492 cctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggg 2551 Query: 481 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 540 ||||||||||||| |||||||| | |||||||||||||||||||| ||| |||| Sbjct: 2552 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcgaatct 2608 Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||| |||| Sbjct: 2609 ctgaccgcgtgcctgttgaagaatgagccggcgacttatag 2649
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 755 bits (381), Expect = 0.0 Identities = 534/581 (91%), Gaps = 6/581 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 118119 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctga 118061 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||||||| |||||||| |||||| |||||||| Sbjct: 118060 aaataagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaatt 118002 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118001 cataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 117942 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 117941 agcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaaccgtgaaaac 117882 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||| | ||| ||||| ||||||||||||| ||||||| | |||| Sbjct: 117881 ggggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgagtcctgcac 117822 Query: 302 cctagatggctaaagtccagtagccgaaagcatcacta-gcttatgctctgacccgagta 360 ||||||||| | |||||||||||||||||||| || | || ||||||| ||||||||| Sbjct: 117821 cctagatggtgagagtccagtagccgaaagcataacaacactcatgctctaacccgagta 117762 Query: 361 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 420 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 117761 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatact 117702 Query: 421 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 480 |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 117701 cctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggg 117642 Query: 481 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 540 ||||||||||||| |||||||| | |||||||||||||||||||| ||| |||| Sbjct: 117641 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcgaatct 117585 Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||| |||| Sbjct: 117584 ctgaccgcgtgcctgttgaagaatgagccggcgacttatag 117544 Score = 755 bits (381), Expect = 0.0 Identities = 534/581 (91%), Gaps = 6/581 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 89983 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctga 90041 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||| ||||||| |||||||| |||||| |||||||| Sbjct: 90042 aaataagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaatt 90100 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90101 cataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 90160 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 90161 agcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaaccgtgaaaac 90220 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||| | ||| ||||| ||||||||||||| ||||||| | |||| Sbjct: 90221 ggggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgagtcctgcac 90280 Query: 302 cctagatggctaaagtccagtagccgaaagcatcacta-gcttatgctctgacccgagta 360 ||||||||| | |||||||||||||||||||| || | || ||||||| ||||||||| Sbjct: 90281 cctagatggtgagagtccagtagccgaaagcataacaacactcatgctctaacccgagta 90340 Query: 361 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 420 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 90341 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatact 90400 Query: 421 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 480 |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 90401 cctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggg 90460 Query: 481 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 540 ||||||||||||| |||||||| | |||||||||||||||||||| ||| |||| Sbjct: 90461 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcgaatct 90517 Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||| |||| Sbjct: 90518 ctgaccgcgtgcctgttgaagaatgagccggcgacttatag 90558
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 753 bits (380), Expect = 0.0 Identities = 532/580 (91%), Gaps = 5/580 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 31 cctaggcacccagag-acgaagaagggcgtagcaagcgacgaaatgcttcggggagctga 89 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||| ||||||||||||||| ||||||| |||||||| |||||| |||||||| Sbjct: 90 aaataagcatggatccggagattcccgaataggttaaccttttgaactgc-tgctgaatt 148 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149 cataggcagacaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 208 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 209 agcaaaagcgattcccatagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaac 268 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||| |||||| | |||||||| |||||||||||| ||||| | | |||| Sbjct: 269 ggggttgtgggggagcaaagtaggcgttgtgtcgctaggcgaagcagttgaatcctgcac 328 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 | ||||||| | |||||||||||||||||||||||||| ||||||||| |||||||||| Sbjct: 329 catagatggtgagagtccagtagccgaaagcatcactagtttatgctctaacccgagtag 388 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 389 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactc 448 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 449 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatagggg 508 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 ||||||||||||| |||||||| | |||||||||||||||||||| ||| ||||| Sbjct: 509 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcgaatctc 565 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||| |||| Sbjct: 566 tgaccgcgtgcctgttgaagaatgagccggcgacttatag 605
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 745 bits (376), Expect = 0.0 Identities = 531/580 (91%), Gaps = 5/580 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 3920 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctga 3978 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||| |||||||||||||||||||||| ||||||| |||||||| |||||| |||||||| Sbjct: 3979 aaagaagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaatt 4037 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 || || | |||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 4038 cacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagaggaagagaa 4097 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 4098 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaac 4157 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | |||| Sbjct: 4158 ggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttctgcac 4217 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 || |||||| | ||||||||||||||||||| |||| |||| || | |||||||||| Sbjct: 4218 cccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaacccgagtag 4277 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4278 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 4337 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 4338 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggg 4397 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 ||||||||||||| ||||| || | |||| |||||||||| |||| ||| |||||| Sbjct: 4398 agtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggagaatcggatctc 4454 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||| |||| Sbjct: 4455 tgaccgcgtgcctgttgaagaatgagccggcgacttatag 4494
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 745 bits (376), Expect = 0.0 Identities = 531/580 (91%), Gaps = 5/580 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 14 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctga 72 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||| |||||||||||||||||| ||||||| ||||||||||||||| ||||||||| Sbjct: 73 aaataagtatagatccggagattcccgaataggttaaccttttaaactgc-tgctgaatc 131 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 ||| || |||||||||||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 132 cataggcgggcaagagacaacctggcgaactgaaacatcttagtagccggaggaagagaa 191 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 192 agcaaaagcgattctcgtagtagcggcgagcgaaacgggagcagcctaaaccgtgaaaac 251 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||| |||| | | |||| |||| ||||||||||||| ||||||| | |||| Sbjct: 252 ggggttgtgggggagctaaagaagcattgtattgctaggcgaagcagttgagtcctgcac 311 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 ||||||||| | ||||||||| |||||||||| || ||||| ||||| ||||||||| Sbjct: 312 cctagatggtgagagtccagtaaccgaaagcattacaagcttgggctctaacccgagtaa 371 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 372 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 431 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 432 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggg 491 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 ||||||||||||| |||||||| | |||| ||||||||||||||| ||| |||||| Sbjct: 492 agtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggagaatcggatctc 548 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||| |||| Sbjct: 549 tgaccgcgtgcctgttgaagaatgagccggcgacttatag 588
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 745 bits (376), Expect = 0.0 Identities = 531/580 (91%), Gaps = 5/580 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 30 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctga 88 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||| |||||||||||||||||||||| ||||||| |||||||| |||||| |||||||| Sbjct: 89 aaagaagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaatt 147 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 || || | |||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 148 cacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagaggaagagaa 207 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 208 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaac 267 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | |||| Sbjct: 268 ggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttctgcac 327 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 || |||||| | ||||||||||||||||||| |||| |||| || | |||||||||| Sbjct: 328 cccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaacccgagtag 387 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 447 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 448 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggg 507 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 ||||||||||||| ||||| || | |||| |||||||||| |||| ||| |||||| Sbjct: 508 agtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggagaatcggatctc 564 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||| |||| Sbjct: 565 tgaccgcgtgcctgttgaagaatgagccggcgacttatag 604
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 745 bits (376), Expect = 0.0 Identities = 531/580 (91%), Gaps = 5/580 (0%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 151215 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctga 151157 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||| |||||||||||||||||||||| ||||||| |||||||| |||||| |||||||| Sbjct: 151156 aaagaagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaatt 151098 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 || || | |||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 151097 cacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagaggaagagaa 151038 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 151037 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaac 150978 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | |||| Sbjct: 150977 ggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttctgcac 150918 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 || |||||| | ||||||||||||||||||| |||| |||| || | |||||||||| Sbjct: 150917 cccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaacccgagtag 150858 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150857 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 150798 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 150797 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggg 150738 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 ||||||||||||| ||||| || | |||| |||||||||| |||| ||| |||||| Sbjct: 150737 agtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggagaatcggatctc 150681 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||| |||| Sbjct: 150680 tgaccgcgtgcctgttgaagaatgagccggcgacttatag 150641 Score = 745 bits (376), Expect = 0.0 Identities = 531/580 (91%), Gaps = 5/580 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 117451 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctga 117509 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||| |||||||||||||||||||||| ||||||| |||||||| |||||| |||||||| Sbjct: 117510 aaagaagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaatt 117568 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 || || | |||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 117569 cacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagaggaagagaa 117628 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 117629 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaac 117688 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | |||| Sbjct: 117689 ggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttctgcac 117748 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 || |||||| | ||||||||||||||||||| |||| |||| || | |||||||||| Sbjct: 117749 cccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaacccgagtag 117808 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117809 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 117868 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 117869 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggg 117928 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 ||||||||||||| ||||| || | |||| |||||||||| |||| ||| |||||| Sbjct: 117929 agtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggagaatcggatctc 117985 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||| |||| Sbjct: 117986 tgaccgcgtgcctgttgaagaatgagccggcgacttatag 118025
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 745 bits (376), Expect = 0.0 Identities = 531/580 (91%), Gaps = 5/580 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 30 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctga 88 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||| |||||||||||||||||||||| ||||||| |||||||| |||||| |||||||| Sbjct: 89 aaagaagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaatt 147 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 || || | |||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 148 cacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagaggaagagaa 207 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 208 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaac 267 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | |||| Sbjct: 268 ggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttctgcac 327 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 || |||||| | ||||||||||||||||||| |||| |||| || | |||||||||| Sbjct: 328 cccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaacccgagtag 387 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 447 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 448 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggg 507 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 ||||||||||||| ||||| || | |||| |||||||||| |||| ||| |||||| Sbjct: 508 agtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggagaatcggatctc 564 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||| |||| Sbjct: 565 tgaccgcgtgcctgttgaagaatgagccggcgacttatag 604
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 743 bits (375), Expect = 0.0 Identities = 534/584 (91%), Gaps = 9/584 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 31 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctga 89 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||| || ||||||||||||||| ||||||| ||||||||||||||| |||||||| Sbjct: 90 aaataagtatggatccggagattcccgaataggttaaccttttaaactgc-tgctgaatt 148 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 ||| || |||||||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 149 cataggcgggcaagagacaacccggcgaactgaaacatcttagtagccggaggaaaagaa 208 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 209 agcaaaagcgattctcgtagtagcggcgagcgaaatgggagcggcctaaaccgtgaaaac 268 Query: 242 ggggttgtgggagagcaatacaa----gcgttgtgctgctaggcgaagcggttgagtgcc 297 ||||||||||| |||| |||||| || ||| ||||||||||||||| ||||||| | Sbjct: 269 ggggttgtgggggagctatacaaataagcattgcgctgctaggcgaagcagttgagtcct 328 Query: 298 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 357 |||||| |||||| | ||||||||| |||||||||| || | |||||||||| |||||| Sbjct: 329 gcaccccagatggtgagagtccagtaaccgaaagcataacaatcttatgctctaacccga 388 Query: 358 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 448 Query: 418 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 449 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatc 508 Query: 478 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 537 ||| ||||||||||||| |||||||| | |||||||||||||||||||| ||| || Sbjct: 509 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcgga 565 Query: 538 tctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 566 tctctgaccgcgtgcctgttgaagaatgagccggcgacttatag 609
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 739 bits (373), Expect = 0.0 Identities = 496/533 (93%), Gaps = 6/533 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| ||||||||||||||| || |||||||||||||||||||||||| Sbjct: 38 cctaggcacccagag-acgaggaagggcgtattaatcgacgaaatgcttcggggagttga 96 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| |||||||||||||||| |||||| |||||||| |||| | ||||||||| Sbjct: 97 aaataagccgagatccggagattcccgaatagggcaacctttcgaacttc-tgctgaatc 155 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 156 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 215 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 216 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 275 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||| | || |||||| | || Sbjct: 276 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtggagtgcggtac 335 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 336 cctagatggtgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 395 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 396 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 455 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 |||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||| Sbjct: 456 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa-ccccatcgggg 514 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 534 ||||||||| ||| |||||||| | ||||| |||||||||||||| ||||| Sbjct: 515 agtgaaataaaacatgaaaccg---taagctctcaagcagtgggaggagaaag 564
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 739 bits (373), Expect = 0.0 Identities = 476/506 (94%), Gaps = 7/506 (1%) Strand = Plus / Minus Query: 77 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 136 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 512 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 454 Query: 137 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 394 Query: 197 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 334 Query: 257 caatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaa 315 |||||||||||| ||||||||||||||||| | || ||| |||||||||||||| ||| Sbjct: 333 caatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaa 274 Query: 316 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 273 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 214 Query: 376 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 435 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 213 aatcccgtgtgaatcagcaaggaccgccttgcaaggctaaatactcctgggtgaccgata 154 Query: 436 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 495 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 153 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 94 Query: 496 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 555 |||||||| | |||||||||||||||||||| | || | ||||||||||||||||| Sbjct: 93 tgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctg 39 Query: 556 ttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||| Sbjct: 38 ttgaagaatgagccggcgactcatag 13
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 731 bits (369), Expect = 0.0 Identities = 531/581 (91%), Gaps = 6/581 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 146529 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctga 146471 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||| ||||| ||||||||||||||| ||||||| |||||||| |||| | |||||||| Sbjct: 146470 aaatgagcatggatccggagattcccgaataggttaaccttttgaactac-tgctgaatt 146412 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 ||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 146411 cataggcaggcgagagacaacctggcgaactgaaacatcttagtagccagaggaagagaa 146352 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 146351 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaac 146292 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||| ||||||| |||||||||||||||| ||||||| | | || Sbjct: 146291 ggggttgtgggagagcaatataagcgttttgctgctaggcgaagcagttgagtcctgtac 146232 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagc-ttatgctctgacccgagta 360 ||||||||| | |||||||||||||||||||||||| || |||||||| ||||||||| Sbjct: 146231 cctagatggtgagagtccagtagccgaaagcatcactggctttatgctccaacccgagta 146172 Query: 361 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 420 |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 146171 gcatggggcacgcagaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatact 146112 Query: 421 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 480 ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 146111 cctgggtgaccgatagcaaagtagtaccgtgagggaaaggtgaaaagaacccccgtcggg 146052 Query: 481 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 540 ||||||||||||| |||||||| | ||||||||||||||||||| ||| |||| Sbjct: 146051 gagtgaaatagaacatgaaaccg---taggctcccaagcagtgggaggagaatcggatcc 145995 Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||| |||| Sbjct: 145994 ctgaccgcgtgcctgttgaagaatgagccggcgacttatag 145954 Score = 731 bits (369), Expect = 0.0 Identities = 531/581 (91%), Gaps = 6/581 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 111933 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctga 111991 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||| ||||| ||||||||||||||| ||||||| |||||||| |||| | |||||||| Sbjct: 111992 aaatgagcatggatccggagattcccgaataggttaaccttttgaactac-tgctgaatt 112050 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 ||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 112051 cataggcaggcgagagacaacctggcgaactgaaacatcttagtagccagaggaagagaa 112110 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 112111 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaac 112170 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 |||||||||||||||||||| ||||||| |||||||||||||||| ||||||| | | || Sbjct: 112171 ggggttgtgggagagcaatataagcgttttgctgctaggcgaagcagttgagtcctgtac 112230 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagc-ttatgctctgacccgagta 360 ||||||||| | |||||||||||||||||||||||| || |||||||| ||||||||| Sbjct: 112231 cctagatggtgagagtccagtagccgaaagcatcactggctttatgctccaacccgagta 112290 Query: 361 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 420 |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 112291 gcatggggcacgcagaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatact 112350 Query: 421 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 480 ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 112351 cctgggtgaccgatagcaaagtagtaccgtgagggaaaggtgaaaagaacccccgtcggg 112410 Query: 481 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 540 ||||||||||||| |||||||| | ||||||||||||||||||| ||| |||| Sbjct: 112411 gagtgaaatagaacatgaaaccg---taggctcccaagcagtgggaggagaatcggatcc 112467 Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||| |||| Sbjct: 112468 ctgaccgcgtgcctgttgaagaatgagccggcgacttatag 112508
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 729 bits (368), Expect = 0.0 Identities = 450/473 (95%), Gaps = 5/473 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 27 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 85 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||| Sbjct: 86 aaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatc 144 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 204 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 205 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 264 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| |||||||||||||||||||| || | | |||| Sbjct: 265 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggaatactgcac 324 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 |||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 325 cctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 384 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 385 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatacta 444 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 474 | |||||||||||| |||||||||||||||||||| |||| ||||||||||| Sbjct: 445 c--ggtgaccgatagtgaagtagtaccgtgagggaagggtg-aaagaaccccc 494
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 726 bits (366), Expect = 0.0 Identities = 447/471 (94%), Gaps = 6/471 (1%) Strand = Plus / Plus Query: 112 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 171 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 76 Query: 172 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 231 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 136 Query: 232 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt- 290 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 137 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagccc 196 Query: 291 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 350 || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 197 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctct 256 Query: 351 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 410 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 316 Query: 411 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 470 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 317 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 376 Query: 471 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 530 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 377 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 433 Query: 531 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 || | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 434 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 482
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 726 bits (366), Expect = 0.0 Identities = 537/581 (92%), Gaps = 19/581 (3%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 703 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 645 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| ||||||||||||||||| ||||||||| ||| |||| |||||||||| Sbjct: 644 aaataagcgtagatccggagattcccgaataggtca--ctt---gactg-ctgctgaatc 591 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| |||||||||||||| || |||| ||| |||||||||||||||||||||||||| Sbjct: 590 catg-gcaggcaagagaca--ct-gcga--tga-acatcttagtagccagaggaaaagaa 538 Query: 182 a-gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 240 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 537 aggcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 478 Query: 241 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 300 ||||||||||||||||| |||||||||| |||||||||||||||||||| |||||| ||| Sbjct: 477 cggggttgtgggagagcgatacaagcgtcgtgctgctaggcgaagcggtggagtgctgca 418 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 360 ||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 417 ccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagta 358 Query: 361 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 357 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 298 Query: 421 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 480 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 297 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 238 Query: 481 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 540 ||||||||||||| |||||||| | |||||||||||||||||||| | | | || Sbjct: 237 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggct 182 Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 141
>gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial sequence; chloroplast Length = 467 Score = 724 bits (365), Expect = 0.0 Identities = 440/463 (95%), Gaps = 2/463 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 7 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 65 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||| ||||| Sbjct: 66 aaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgccgaatc 124 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 125 catgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaa 184 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 244 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||||||||||||||| ||||||||||||||||||| || |||||| Sbjct: 245 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggccgaacaccgcac 304 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 305 cctagatggtgggagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 364 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 365 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 424 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 464 |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 425 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaa 467
>dbj|AK107856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B02, full insert sequence Length = 998 Score = 710 bits (358), Expect = 0.0 Identities = 364/366 (99%) Strand = Plus / Plus Query: 70 atagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagca 129 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 atagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagca 60 Query: 130 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 120 Query: 190 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 180 Query: 250 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 309 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 240 Query: 310 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 369 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 241 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 300 Query: 370 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 360 Query: 430 ccgata 435 |||||| Sbjct: 361 ccgata 366
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 682 bits (344), Expect = 0.0 Identities = 356/360 (98%) Strand = Plus / Minus Query: 20 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 79 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 123423 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaattaagcatagatccgg 123364 Query: 80 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 139 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 123363 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 123304 Query: 140 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123303 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 123244 Query: 200 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123243 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 123184 Query: 260 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123183 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 123124 Query: 320 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 379 ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 123123 agtagccgaaagcatcactagcttacgctctgccccgagtagcatggggcacgtggaatc 123064 Score = 410 bits (207), Expect = e-111 Identities = 210/211 (99%) Strand = Plus / Minus Query: 371 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122820 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 122761 Query: 431 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122760 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 122701 Query: 491 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122700 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 122641 Query: 551 gcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||| ||||||||| Sbjct: 122640 gcctgttgaagaatgagccggtgactcatag 122610
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 682 bits (344), Expect = 0.0 Identities = 356/360 (98%) Strand = Plus / Minus Query: 20 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 79 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 12825964 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaattaagcatagatccgg 12825905 Query: 80 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 139 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 12825904 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 12825845 Query: 140 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825844 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 12825785 Query: 200 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825784 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 12825725 Query: 260 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825724 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 12825665 Query: 320 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 379 ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 12825664 agtagccgaaagcatcactagcttacgctctgccccgagtagcatggggcacgtggaatc 12825605 Score = 410 bits (207), Expect = e-111 Identities = 210/211 (99%) Strand = Plus / Minus Query: 371 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825361 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 12825302 Query: 431 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825301 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 12825242 Query: 491 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825241 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 12825182 Query: 551 gcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||| ||||||||| Sbjct: 12825181 gcctgttgaagaatgagccggtgactcatag 12825151 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 316 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 375 ||||||||||||||||||||||||||||||||||||| || |||||||||| ||| |||| Sbjct: 16021783 gtccagtagccgaaagcatcactagcttatgctctgaaccaagtagcatggcgcatgtgg 16021842
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 670 bits (338), Expect = 0.0 Identities = 377/391 (96%), Gaps = 13/391 (3%) Strand = Plus / Minus Query: 196 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 255 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75478 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 75419 Query: 256 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75418 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 75359 Query: 316 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 375 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 75358 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 75299 Query: 376 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 430 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 75298 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 75239 Query: 431 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75238 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 75179 Query: 491 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 550 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 75178 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 75127 Query: 551 gcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||| Sbjct: 75126 gcctgttgaagaatgagccggcgactcatag 75096 Score = 359 bits (181), Expect = 7e-96 Identities = 195/199 (97%), Gaps = 1/199 (0%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75682 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 75624 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 75623 aaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatc 75564 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75563 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 75504 Query: 182 agcaaaagcgattcccgta 200 ||||||||||||||||||| Sbjct: 75503 agcaaaagcgattcccgta 75485 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 127 gcaggcaagagacaacctggcgaactgaaacatcttagta 166 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 430381 gcaggcaagagacaacctagcgaactgaaacatcttagta 430342 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 427 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 473 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 400814 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 400860
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 670 bits (338), Expect = 0.0 Identities = 377/391 (96%), Gaps = 13/391 (3%) Strand = Plus / Plus Query: 196 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 255 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382060 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 382119 Query: 256 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382120 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 382179 Query: 316 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 375 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 382180 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 382239 Query: 376 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 430 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 382240 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 382299 Query: 431 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382300 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 382359 Query: 491 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 550 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 382360 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 382411 Query: 551 gcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||| Sbjct: 382412 gcctgttgaagaatgagccggcgactcatag 382442 Score = 359 bits (181), Expect = 7e-96 Identities = 195/199 (97%), Gaps = 1/199 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381856 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 381914 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 381915 aaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatc 381974 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381975 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 382034 Query: 182 agcaaaagcgattcccgta 200 ||||||||||||||||||| Sbjct: 382035 agcaaaagcgattcccgta 382053 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 127 gcaggcaagagacaacctggcgaactgaaacatcttagta 166 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 254042 gcaggcaagagacaacctagcgaactgaaacatcttagta 254081 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 127 gcaggcaagagacaacctggcgaactgaaacatcttagta 166 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 125350 gcaggcaagagacaacctagcgaactgaaacatcttagta 125389 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 427 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 473 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 283605 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 283559 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 427 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 473 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 154913 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 154867
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 670 bits (338), Expect = 0.0 Identities = 377/391 (96%), Gaps = 13/391 (3%) Strand = Plus / Minus Query: 196 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 255 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113569 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 113510 Query: 256 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113509 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 113450 Query: 316 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 375 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 113449 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 113390 Query: 376 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 430 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 113389 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 113330 Query: 431 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113329 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 113270 Query: 491 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 550 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 113269 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 113218 Query: 551 gcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||| Sbjct: 113217 gcctgttgaagaatgagccggcgactcatag 113187 Score = 359 bits (181), Expect = 7e-96 Identities = 195/199 (97%), Gaps = 1/199 (0%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113773 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 113715 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 113714 aaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatc 113655 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113654 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 113595 Query: 182 agcaaaagcgattcccgta 200 ||||||||||||||||||| Sbjct: 113594 agcaaaagcgattcccgta 113576 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 127 gcaggcaagagacaacctggcgaactgaaacatcttagta 166 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 323068 gcaggcaagagacaacctagcgaactgaaacatcttagta 323029 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 427 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 473 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 293448 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 293494
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 670 bits (338), Expect = 0.0 Identities = 377/391 (96%), Gaps = 13/391 (3%) Strand = Plus / Minus Query: 196 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 255 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368251 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 368192 Query: 256 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368191 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 368132 Query: 316 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 375 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 368131 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 368072 Query: 376 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 430 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 368071 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 368012 Query: 431 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368011 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 367952 Query: 491 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 550 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 367951 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 367900 Query: 551 gcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||| Sbjct: 367899 gcctgttgaagaatgagccggcgactcatag 367869 Score = 670 bits (338), Expect = 0.0 Identities = 377/391 (96%), Gaps = 13/391 (3%) Strand = Plus / Minus Query: 196 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 255 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184856 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 184797 Query: 256 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184796 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 184737 Query: 316 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 375 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 184736 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 184677 Query: 376 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 430 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 184676 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 184617 Query: 431 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184616 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 184557 Query: 491 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 550 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 184556 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 184505 Query: 551 gcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||| Sbjct: 184504 gcctgttgaagaatgagccggcgactcatag 184474 Score = 359 bits (181), Expect = 7e-96 Identities = 195/199 (97%), Gaps = 1/199 (0%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368455 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 368397 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 368396 aaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatc 368337 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368336 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 368277 Query: 182 agcaaaagcgattcccgta 200 ||||||||||||||||||| Sbjct: 368276 agcaaaagcgattcccgta 368258 Score = 359 bits (181), Expect = 7e-96 Identities = 195/199 (97%), Gaps = 1/199 (0%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185060 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 185002 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 185001 aaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatc 184942 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184941 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 184882 Query: 182 agcaaaagcgattcccgta 200 ||||||||||||||||||| Sbjct: 184881 agcaaaagcgattcccgta 184863 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 127 gcaggcaagagacaacctggcgaactgaaacatcttagta 166 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 295897 gcaggcaagagacaacctagcgaactgaaacatcttagta 295858 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 427 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 473 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 266283 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 266329
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 654 bits (330), Expect = 0.0 Identities = 523/581 (90%), Gaps = 9/581 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| ||||||||||| |||| || |||||||||||||||||||||||| Sbjct: 30 cctaggcacccagag-acgaggaagggtgtagtaatcgacgaaatgcttcggggagttga 88 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||||||||||||| |||||||| ||| || ||||||| | ||||| |||| |||| Sbjct: 89 aaataagcatagatccgtagattcccgaatggggtaacctttcacactgc-tgctcaatc 147 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 148 catgggcaggaaagagacaacctggcgaactgaaacatcttagtagccagaggaaaataa 207 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 208 agcaaaagcgattcccatagtagcggcgagcgaaatgggatcagcctaaaccgcgaaaac 267 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgca 300 |||||||||||||||||||| |||||| ||||||||||||||||| | || | || ||| Sbjct: 268 ggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcagcttaaatgatgca 327 Query: 301 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 360 ||||||||||| |||||||||||| | |||||||||||| || ||||||||||||||| Sbjct: 328 ccctagatggcgaaagtccagtagtcaaaagcatcactacgttgcgctctgacccgagta 387 Query: 361 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 420 ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 gcatgggacacgtgtaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 447 Query: 421 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 480 ||||||| ||| |||| ||||||||||||||||||| ||||||||||| ||||| |||| Sbjct: 448 cctgggtaaccaatagtaaagtagtaccgtgagggaagggtgaaaagaa-ccccattggg 506 Query: 481 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 540 ||||||||||||| |||||||| | |||| ||||||||||||||| | || | || Sbjct: 507 gagtgaaatagaacatgaaaccg---taagctaccaagcagtgggaggagccaggg--ct 561 Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 562 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 602
>gb|DQ160037.1| Taraxacum officinale To27-3 mRNA, partial sequence Length = 336 Score = 563 bits (284), Expect = e-157 Identities = 321/332 (96%), Gaps = 1/332 (0%) Strand = Plus / Minus Query: 97 aaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaa 156 ||||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 335 aacctttcaaactgc-tgctgaatccatgggcaggcaggagacaacctggcgaactgaaa 277 Query: 157 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 216 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 217 Query: 217 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 216 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 157 Query: 277 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 336 |||||||||| || || ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 156 taggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 97 Query: 337 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 396 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 37 Query: 397 gaccaccttgcaaggctaaatactcctgggtg 428 |||||||||||||||||||||||||||||||| Sbjct: 36 gaccaccttgcaaggctaaatactcctgggtg 5
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 531 bits (268), Expect = e-148 Identities = 271/272 (99%) Strand = Plus / Plus Query: 310 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 369 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 60 Query: 370 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 120 Query: 430 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 489 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 180 Query: 490 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 549 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 240 Query: 550 tgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||| Sbjct: 241 tgcctgttgaagaatgagccggcgactcatag 272
>gb|M37149.1|SOYCPRTG Soybean chloroplast 16S rRNA (3' end), 18S rRNA (5' end), Ile-tRNA, and Ala-tRNA genes Length = 3022 Score = 523 bits (264), Expect = e-145 Identities = 368/397 (92%), Gaps = 6/397 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 2629 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 2687 Query: 62 aaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcctgctgaat 120 |||||||| ||||||||| ||||||| | |||||||||||||| |||||| |||||||| Sbjct: 2688 aaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc-tgctgaat 2746 Query: 121 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 180 ||| | |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 2747 ccacgggcaggcaagagacaacttggtgaactgaaacatcttagtagccagaggaaaaga 2806 Query: 181 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2807 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 2866 Query: 241 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag--tgccg 298 ||||||||||||||||| ||||||| || ||||||||||||||||| | ||| ||| | Sbjct: 2867 cggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagagaatgctg 2926 Query: 299 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 358 ||||||||||||| | |||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 2927 caccctagatggcgagagtccagtagccgaaagcatcact-gcttacgctctgacccgag 2985 Query: 359 tagcatggggcacgtggaatcccgtgtgaatcagcaa 395 |||||| |||||||||||||||||||||||||||||| Sbjct: 2986 tagcatagggcacgtggaatcccgtgtgaatcagcaa 3022
>gb|M21402.1|SOYRDNASPA Soybean chloroplast 16S/23S ribosomal intergenic spacer DNA Length = 1277 Score = 523 bits (264), Expect = e-145 Identities = 368/397 (92%), Gaps = 6/397 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 884 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 942 Query: 62 aaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcctgctgaat 120 |||||||| ||||||||| ||||||| | |||||||||||||| |||||| |||||||| Sbjct: 943 aaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc-tgctgaat 1001 Query: 121 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 180 ||| | |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 1002 ccacgggcaggcaagagacaacttggtgaactgaaacatcttagtagccagaggaaaaga 1061 Query: 181 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1062 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 1121 Query: 241 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag--tgccg 298 ||||||||||||||||| ||||||| || ||||||||||||||||| | ||| ||| | Sbjct: 1122 cggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagagaatgctg 1181 Query: 299 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 358 ||||||||||||| | |||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 1182 caccctagatggcgagagtccagtagccgaaagcatcact-gcttacgctctgacccgag 1240 Query: 359 tagcatggggcacgtggaatcccgtgtgaatcagcaa 395 |||||| |||||||||||||||||||||||||||||| Sbjct: 1241 tagcatagggcacgtggaatcccgtgtgaatcagcaa 1277
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 513 bits (259), Expect = e-142 Identities = 497/575 (86%), Gaps = 4/575 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||| ||||||||| |||| |||||||||||||||||||| || Sbjct: 143949 cctaggcacccagag-acgaagaagggcgtggcaaacgacgaaatgcttcggggagccga 144007 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||| | |||||||||||||||||| ||||||| |||||| |||||||||||||||| Sbjct: 144008 aaataggtatagatccggagattcccgaataggttaaccttccaaactgcctgctgaatt 144067 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 || ||||| |||||||||||| ||||||||||||||||||||||||| ||||| | || Sbjct: 144068 cagaagcagacaagagacaacccggcgaactgaaacatcttagtagccggaggaggaaaa 144127 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||| ||||| ||||||| |||| |||| ||||||||||||||| || Sbjct: 144128 agcaaaagcgattcccctagtaacggcgagtgaaacgggaagagcctaaaccgtgaagac 144187 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||| || || | || | ||||||||||| ||||||||| |||| Sbjct: 144188 ggggttgtgggagagtgatgagggcttcgttttactaggcgaagcagttgagtgctgcac 144247 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 || |||||| | ||||||||||||| ||| | |||||| | |||| |||| ||||| Sbjct: 144248 cccagatggtgatagtccagtagccggaagtacagctagctcacgctccaacccaagtag 144307 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 ||||||||||| |||||||||||||||||| |||||||||||| ||||||||||| || Sbjct: 144308 catggggcacgcaaaatcccgtgtgaatcagcgaggaccaccttgtaaggctaaatattc 144367 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 ||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 144368 ctgagtgaccgatagcgaagcagtaccgtgagggaaaggtgaaaagaacccccgtcgggg 144427 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 ||||||||||||| |||||||| ||||||||||||||||||||| ||| | |||||| Sbjct: 144428 agtgaaatagaacatgaaaccg---cgagctcccaagcagtgggaggagaatgagatctc 144484 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgact 576 | ||||||||||||||||||||||||||||||||| Sbjct: 144485 taaccgcgtgcctgttgaagaatgagccggcgact 144519 Score = 513 bits (259), Expect = e-142 Identities = 497/575 (86%), Gaps = 4/575 (0%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||| ||||||||| |||| |||||||||||||||||||| || Sbjct: 88902 cctaggcacccagag-acgaagaagggcgtggcaaacgacgaaatgcttcggggagccga 88844 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||| | |||||||||||||||||| ||||||| |||||| |||||||||||||||| Sbjct: 88843 aaataggtatagatccggagattcccgaataggttaaccttccaaactgcctgctgaatt 88784 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 || ||||| |||||||||||| ||||||||||||||||||||||||| ||||| | || Sbjct: 88783 cagaagcagacaagagacaacccggcgaactgaaacatcttagtagccggaggaggaaaa 88724 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||| ||||| ||||||| |||| |||| ||||||||||||||| || Sbjct: 88723 agcaaaagcgattcccctagtaacggcgagtgaaacgggaagagcctaaaccgtgaagac 88664 Query: 242 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 301 ||||||||||||||| || || | || | ||||||||||| ||||||||| |||| Sbjct: 88663 ggggttgtgggagagtgatgagggcttcgttttactaggcgaagcagttgagtgctgcac 88604 Query: 302 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 361 || |||||| | ||||||||||||| ||| | |||||| | |||| |||| ||||| Sbjct: 88603 cccagatggtgatagtccagtagccggaagtacagctagctcacgctccaacccaagtag 88544 Query: 362 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 421 ||||||||||| |||||||||||||||||| |||||||||||| ||||||||||| || Sbjct: 88543 catggggcacgcaaaatcccgtgtgaatcagcgaggaccaccttgtaaggctaaatattc 88484 Query: 422 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 481 ||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 88483 ctgagtgaccgatagcgaagcagtaccgtgagggaaaggtgaaaagaacccccgtcgggg 88424 Query: 482 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 541 ||||||||||||| |||||||| ||||||||||||||||||||| ||| | |||||| Sbjct: 88423 agtgaaatagaacatgaaaccg---cgagctcccaagcagtgggaggagaatgagatctc 88367 Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgact 576 | ||||||||||||||||||||||||||||||||| Sbjct: 88366 taaccgcgtgcctgttgaagaatgagccggcgact 88332
>dbj|AK104484.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H11, full insert sequence Length = 1091 Score = 490 bits (247), Expect = e-135 Identities = 250/251 (99%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 102 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 103 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 162 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 163 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 222 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 223 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 282 Query: 258 aatacaagcgt 268 ||||||||||| Sbjct: 283 aatacaagcgt 293
>dbj|AK060870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H08, full insert sequence Length = 1091 Score = 490 bits (247), Expect = e-135 Identities = 250/251 (99%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 102 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 103 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 162 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 163 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 222 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 223 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 282 Query: 258 aatacaagcgt 268 ||||||||||| Sbjct: 283 aatacaagcgt 293
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 460 bits (232), Expect = e-126 Identities = 312/336 (92%), Gaps = 2/336 (0%) Strand = Plus / Plus Query: 20 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 79 |||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||| Sbjct: 177078 gaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaatcagcatagatccgg 177137 Query: 80 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 139 |||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 177138 agattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagag 177196 Query: 140 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 199 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 177197 aaccaggcgaactgaaagatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 177256 Query: 200 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 259 |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 177257 agtagcggcgggcgaaatgggagctgcctaaaccgtgaaaacggggttgtgggagagcaa 177316 Query: 260 tacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtc 318 ||||||||| |||| |||||||||||| | || ||| |||||||||||||| |||||| Sbjct: 177317 tacaagcgtcgtgcagctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtc 177376 Query: 319 cagtagccgaaagcatcactagcttatgctctgacc 354 |||||||||||||||||||||||||| ||||||||| Sbjct: 177377 cagtagccgaaagcatcactagcttaggctctgacc 177412 Score = 85.7 bits (43), Expect = 1e-13 Identities = 43/43 (100%) Strand = Plus / Plus Query: 539 ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177405 ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 177447 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 427 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 418398 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 418443 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 427 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 67648 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 67693 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 146 gcgaactgaaacatcttagtagc 168 ||||||||||||||||||||||| Sbjct: 417776 gcgaactgaaacatcttagtagc 417798 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 146 gcgaactgaaacatcttagtagc 168 ||||||||||||||||||||||| Sbjct: 67026 gcgaactgaaacatcttagtagc 67048
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 436 bits (220), Expect = e-119 Identities = 487/572 (85%), Gaps = 18/572 (3%) Strand = Plus / Minus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||| ||||| ||||||||||| || | |||||||||||||| Sbjct: 139224 acgaggaagggcgtagcaggcgac--aatgcttcgggaagccagagataagcatagatcc 139167 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcagg----ca 133 |||||| ||| ||| ||| |||| || ||||||| ||||||||| | || || Sbjct: 139166 ggagatccccgaatgggttaaccccttgaactgcc----gaatccatgggatgggcggca 139111 Query: 134 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 193 |||||| ||| ||||||| |||||||| | ||||| | |||| |||| ||||||||||| Sbjct: 139110 agagacgacccggcgaaccgaaacatccaaatagccgggggaagagaaggcaaaagcgat 139051 Query: 194 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 253 ||||| |||||||||||||||| ||||| ||||||||||||| ||||||||||||||| Sbjct: 139050 tcccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggttgtggga 138991 Query: 254 gagcaatac----aagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 309 |||| ||| ||| ||||||||| |||| |||||||| |||| ||||| || ||| | Sbjct: 138990 gagcgataagtataag-gttgtgctgttaggtgaagcggtcgagtcccgcatcccagacg 138932 Query: 310 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 369 | || ||||| ||||||| ||||| ||| ||||| |||||||||||||||||||||||| Sbjct: 138931 gttagagtccggtagccggaagcagcacaggcttacgctctgacccgagtagcatggggc 138872 Query: 370 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 429 ||||||||||||||| |||||||| |||||||||| | ||||||||||||| |||||||| Sbjct: 138871 acgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctgggtga 138812 Query: 430 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 489 ||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 138811 ccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaat 138752 Query: 490 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 549 ||||| |||||||| | ||||||| |||||||||||| ||| |||||||||||||| Sbjct: 138751 agaacatgaaaccg---taagctcccgagcagtgggaggagaattggatctctgaccgcg 138695 Query: 550 tgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||| |||| Sbjct: 138694 tgcctgttgaagaatgagccggcgacttatag 138663 Score = 436 bits (220), Expect = e-119 Identities = 487/572 (85%), Gaps = 18/572 (3%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||| ||||| ||||||||||| || | |||||||||||||| Sbjct: 82653 acgaggaagggcgtagcaggcgac--aatgcttcgggaagccagagataagcatagatcc 82710 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcagg----ca 133 |||||| ||| ||| ||| |||| || ||||||| ||||||||| | || || Sbjct: 82711 ggagatccccgaatgggttaaccccttgaactgcc----gaatccatgggatgggcggca 82766 Query: 134 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 193 |||||| ||| ||||||| |||||||| | ||||| | |||| |||| ||||||||||| Sbjct: 82767 agagacgacccggcgaaccgaaacatccaaatagccgggggaagagaaggcaaaagcgat 82826 Query: 194 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 253 ||||| |||||||||||||||| ||||| ||||||||||||| ||||||||||||||| Sbjct: 82827 tcccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggttgtggga 82886 Query: 254 gagcaatac----aagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 309 |||| ||| ||| ||||||||| |||| |||||||| |||| ||||| || ||| | Sbjct: 82887 gagcgataagtataag-gttgtgctgttaggtgaagcggtcgagtcccgcatcccagacg 82945 Query: 310 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 369 | || ||||| ||||||| ||||| ||| ||||| |||||||||||||||||||||||| Sbjct: 82946 gttagagtccggtagccggaagcagcacaggcttacgctctgacccgagtagcatggggc 83005 Query: 370 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 429 ||||||||||||||| |||||||| |||||||||| | ||||||||||||| |||||||| Sbjct: 83006 acgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctgggtga 83065 Query: 430 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 489 ||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 83066 ccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaat 83125 Query: 490 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 549 ||||| |||||||| | ||||||| |||||||||||| ||| |||||||||||||| Sbjct: 83126 agaacatgaaaccg---taagctcccgagcagtgggaggagaattggatctctgaccgcg 83182 Query: 550 tgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||| |||| Sbjct: 83183 tgcctgttgaagaatgagccggcgacttatag 83214
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 432 bits (218), Expect = e-118 Identities = 221/222 (99%) Strand = Plus / Plus Query: 360 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 60 Query: 420 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 120 Query: 480 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 539 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gtagtgaaataggacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 180 Query: 540 tctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tctgaccgcgtgcctgttgaagaatgagccggcgactcatag 222
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 410 bits (207), Expect = e-111 Identities = 292/319 (91%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 92 aggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaac 151 |||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct: 3695 aggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcaaac 3637 Query: 152 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 211 ||||| |||||||||||||||||||||||||||||||| ||||||||||||| || |||| Sbjct: 3636 tgaaatatcttagtagccagaggaaaagaaagcaaaagtgattcccgtagtaacgacgag 3577 Query: 212 cgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgt 271 ||||||||||||||||||||||| |||| | ||||||||||||||||| ||| ||| || Sbjct: 3576 tgaaatgggagcagcctaaaccgtaaaaatgaggttgtgggagagcaatgcaaacgtagt 3517 Query: 272 gctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaag 331 || ||||||| ||||||| ||||| |||||||||||||| | ||| |||||||||||| Sbjct: 3516 gccgctaggcaaagcggtggagtgttgcaccctagatggcgagagtttagtagccgaaag 3457 Query: 332 catcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatca 391 |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 3456 catccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatta 3397 Query: 392 gcaaggaccaccttgcaag 410 ||||||||||||||||||| Sbjct: 3396 gcaaggaccaccttgcaag 3378 Score = 95.6 bits (48), Expect = 2e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 419 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 478 ||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 3365 ctcctggctgacctatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 3306 Query: 479 ggtagtgaaatagaacgtgaaacc 502 || |||||||||||| ||||||| Sbjct: 3305 gggagtgaaatagaagatgaaacc 3282 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||| ||| |||||||||||||||| | |||||| |||||||| |||||| Sbjct: 3757 acgaggaagggcatagttagcgacgaaatgcttcagagagttgcaaataagcgtagatca 3698 Query: 78 ggag 81 |||| Sbjct: 3697 ggag 3694 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 539 ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 3249 ctctgaccgcgtacctattgaagaatgagccgacgactcatag 3207
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 410 bits (207), Expect = e-111 Identities = 311/345 (90%), Gaps = 3/345 (0%) Strand = Plus / Minus Query: 237 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 296 ||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||||| | Sbjct: 6284 aaaacggggttgtgggagagcaatataagcgttgtgtcgctaggtgaagcagttgagtcc 6225 Query: 297 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 356 ||||||||||||| | |||||||||| ||||||| || | ||||| ||||| ||||| Sbjct: 6224 tgcaccctagatggtgagagtccagtagtcgaaagcggcattggcttacgctctaacccg 6165 Query: 357 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6164 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 6105 Query: 417 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 476 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 6104 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccctat 6045 Query: 477 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 536 ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| | Sbjct: 6044 cggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaatgga 5988 Query: 537 atctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||| ||||||||||||||||||||| |||| Sbjct: 5987 atctctgaccgcgtgccttttgaagaatgagccggcgacttatag 5943 Score = 262 bits (132), Expect = 1e-66 Identities = 185/200 (92%), Gaps = 2/200 (1%) Strand = Plus / Minus Query: 36 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 95 ||||||||||||||||||||||||| || | |||||||||||||||||||| ||||||| Sbjct: 6512 agcgacgaaatgcttcggggagttgtaattc-gcatagatccggagattcccgaataggt 6454 Query: 96 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 155 |||||||| |||||| ||||||||||||| ||||| ||| | |||||||| |||||||| Sbjct: 6453 taaccttttgaactgc-tgctgaatccatgggcaggtaaggggcaacctggtgaactgaa 6395 Query: 156 acatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaa 215 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 6394 acatcttagtaaccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaa 6335 Query: 216 atgggagcagcctaaaccgt 235 |||||||||||||||||||| Sbjct: 6334 atgggagcagcctaaaccgt 6315
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 408 bits (206), Expect = e-111 Identities = 206/206 (100%) Strand = Plus / Plus Query: 376 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 435 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 60 Query: 436 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 495 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 120 Query: 496 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 555 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 180 Query: 556 ttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||| Sbjct: 181 ttgaagaatgagccggcgactcatag 206
>gb|DQ460110.1| Nicotiana tabacum cDNA-AFLP fragment H-N_BC3M12-1 sequence Length = 249 Score = 404 bits (204), Expect = e-109 Identities = 238/248 (95%), Gaps = 1/248 (0%) Strand = Plus / Plus Query: 189 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 248 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1 gcgattcccgtagtagcggcgagcgaaatgggagcagcctagaccgtgaaaacggggttg 60 Query: 249 tgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctaga 307 |||||||||||||||||||| ||||||||||||||||| | || ||| |||||||||| Sbjct: 61 tgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctaga 120 Query: 308 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 367 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 Query: 368 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 427 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgctaggctaaatactcctgggt 240 Query: 428 gaccgata 435 |||||||| Sbjct: 241 gaccgata 248
>gb|DQ160136.1| Taraxacum officinale To110-2 mRNA, partial sequence Length = 282 Score = 394 bits (199), Expect = e-106 Identities = 253/269 (94%), Gaps = 4/269 (1%) Strand = Plus / Plus Query: 313 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 372 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 62 Query: 373 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 122 Query: 433 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 492 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 123 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 182 Query: 493 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 552 || |||||||| | |||||||||||||||||||||| | | |||||||||||||| Sbjct: 183 acatgaaaccg---taagctcccaagcagtgggaggggcccg-gggctctgaccgcgtgc 238 Query: 553 ctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||| Sbjct: 239 ctgttgaagaatgagccggcgactcatag 267
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 381 bits (192), Expect = e-102 Identities = 237/250 (94%), Gaps = 2/250 (0%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 79740 cctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttga 79682 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||||||||||||||||| ||||||| ||||||||||||||| |||||| |||||||| Sbjct: 79681 aaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-tgctgaatt 79623 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79622 cacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 79563 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 79562 agcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaac 79503 Query: 242 ggggttgtgg 251 |||||||||| Sbjct: 79502 ggggttgtgg 79493
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 371 bits (187), Expect = 2e-99 Identities = 201/205 (98%), Gaps = 1/205 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75796 cctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 75854 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 75855 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgcggaatc 75914 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75915 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 75974 Query: 182 agcaaaagcgattcccgtagtagcg 206 ||||||||||||||||||||||||| Sbjct: 75975 agcaaaagcgattcccgtagtagcg 75999 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 427 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 473 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 374093 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 374047 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 427 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 473 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 262355 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 262309 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 ggcgaactgaaacatcttag 164 |||||||||||||||||||| Sbjct: 320856 ggcgaactgaaacatcttag 320837
>emb|AJ538583.1|NTA538583 Nicotiana tabacum cDNA-AFLP-fragment BC3-M31-041 Length = 226 Score = 355 bits (179), Expect = 1e-94 Identities = 200/207 (96%) Strand = Plus / Plus Query: 298 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 357 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10 gcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 69 Query: 358 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 417 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 70 gtagcatggggcacgtggaatcccgtgtgaatcaacaaggaccaccttgcaaggctaaat 129 Query: 418 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 477 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 130 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 189 Query: 478 gggtagtgaaatagaacgtgaaaccgt 504 ||| ||||||||||||| ||||||||| Sbjct: 190 ggggagtgaaatagaacatgaaaccgt 216
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 339 bits (171), Expect = 6e-90 Identities = 456/541 (84%), Gaps = 15/541 (2%) Strand = Plus / Plus Query: 42 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 100 ||||||||| |||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgctttggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 101 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 160 ||| |||||| |||| | |||||| |||| ||||||| ||||||| ||||||||||||| Sbjct: 128 ttt--aactgc-tgcttattccatg-gcagacaagaga-aacctggtgaactgaaacatc 182 Query: 161 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 220 |||||||||||||||||| |||||||||| |||||| |||||| ||| | |||| ||| Sbjct: 183 ttagtagccagaggaaaataaagcaaaagttattcccatagtagtggcaaatgaaaaggg 242 Query: 221 agcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctagg 280 | ||||||||| || |||| ||||||| || ||||||| ||| || || |||||| Sbjct: 243 aacagcctaaatcgctaaaatggggttgggg---agcaataaaagtattttgttgctaga 299 Query: 281 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 340 || || || |||| | | ||||||||||| | |||||||||| |||| |||| ||| Sbjct: 300 cggagtagtggagttctgaaccctagatggtgagagtccagtagtataaagtatcattag 359 Query: 341 cttatgctctga-cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggac 399 |||||||| | | ||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 360 cttatgcttttaacccgagtagcatgggacatatggaatcccgtgtgaatcagcaaggac 419 Query: 400 caccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaag 459 ||||||| |||||||||||||| ||||||||| |||| |||||||||||||||||||| | Sbjct: 420 caccttgaaaggctaaatactcttgggtgaccaatagtgaagtagtaccgtgagggaagg 479 Query: 460 gtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagc 519 |||||||||||||||| |||| |||||| |||||| ||||| | | ||| |||||| Sbjct: 480 gtgaaaagaacccccattggggagtgaactagaacatgaaaac---atatgctaccaagc 536 Query: 520 agtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 579 ||||||||| || || | |||||||| |||||| ||||||||||||| ||||||||||| Sbjct: 537 agtgggaggagacaggg--ctctgaccacgtgcccgttgaagaatgagtcggcgactcat 594 Query: 580 a 580 | Sbjct: 595 a 595
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 293 bits (148), Expect = 3e-76 Identities = 210/230 (91%), Gaps = 3/230 (1%) Strand = Plus / Plus Query: 352 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 411 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 437 Query: 412 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 471 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 438 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 497 Query: 472 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 531 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 498 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 554 Query: 532 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 | | |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 555 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttatag 604 Score = 270 bits (136), Expect = 5e-69 Identities = 210/234 (89%), Gaps = 1/234 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 18 cctaggcacccagag-acgaagaagggcgtagcaagcgacgaaatgcttcggggagctga 76 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 || |||||| ||||||||||| ||| |||||| ||||| || |||||||||||||| Sbjct: 77 gaacaagcattgatccggagatgcccgaataggggaacctatttgactgcctgctgaatt 136 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 || | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137 gatagggaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 196 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 235 |||||||||||||||| ||||| |||||||||||||||| ||||||||||||| Sbjct: 197 agcaaaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaaccgt 250
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 293 bits (148), Expect = 3e-76 Identities = 210/230 (91%), Gaps = 3/230 (1%) Strand = Plus / Plus Query: 352 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 411 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 391 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 450 Query: 412 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 471 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 451 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 510 Query: 472 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 531 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 511 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 567 Query: 532 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 | | |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 568 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttatag 617 Score = 270 bits (136), Expect = 5e-69 Identities = 210/234 (89%), Gaps = 1/234 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 31 cctaggcacccagag-acgaagaagggcgtagcaagcgacgaaatgcttcggggagctga 89 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 || |||||| ||||||||||| ||| |||||| ||||| || |||||||||||||| Sbjct: 90 gaacaagcattgatccggagatgcccgaataggggaacctatttgactgcctgctgaatt 149 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 || | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150 gatagggaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 209 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 235 |||||||||||||||| ||||| |||||||||||||||| ||||||||||||| Sbjct: 210 agcaaaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaaccgt 263
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 291 bits (147), Expect = 1e-75 Identities = 209/229 (91%), Gaps = 3/229 (1%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 496 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 555 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 556 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 615 Query: 473 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 532 ||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| Sbjct: 616 ccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaa 672 Query: 533 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 | |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 673 tggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttatag 721 Score = 260 bits (131), Expect = 5e-66 Identities = 208/233 (89%), Gaps = 1/233 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||| |||||||||||||||||||||||||||||||| || ||| Sbjct: 135 cctaggcacccagag-acgaagaagggcgtagcaagcgacgaaatgcttcgggaagctga 193 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 || |||||| ||||||||||| ||| |||||| ||||| || |||||||||||||| Sbjct: 194 gaacaagcattgatccggagatgcccgaataggggaacctatttgactgcctgctgaatt 253 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 || | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 254 gatagggaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 313 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 234 |||||||||||||||| ||||| |||||||||||||||| |||||||||||| Sbjct: 314 agcaaaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaaccg 366
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04, complete sequence Length = 141001 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 306 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 364 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 95252 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 95311 Query: 365 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 424 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 95312 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 95371 Query: 425 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 484 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 95372 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 95431 Query: 485 gaaatagaacgtgaaaccgtgctgagctcc 514 |||||||||||||||||||||||||||||| Sbjct: 95432 gaaatagaacgtgaaaccgtgctgagctcc 95461
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Minus Query: 306 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 364 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 937 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 878 Query: 365 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 424 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 877 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 818 Query: 425 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 484 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 817 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 758 Query: 485 gaaatagaacgtgaaaccgtgctgagctcc 514 |||||||||||||||||||||||||||||| Sbjct: 757 gaaatagaacgtgaaaccgtgctgagctcc 728
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 306 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 364 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11893525 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11893584 Query: 365 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 424 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11893585 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11893644 Query: 425 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 484 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11893645 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11893704 Query: 485 gaaatagaacgtgaaaccgtgctgagctcc 514 |||||||||||||||||||||||||||||| Sbjct: 11893705 gaaatagaacgtgaaaccgtgctgagctcc 11893734 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 507 tgagctcccaagcagtgggaggggaaagtgatc 539 |||||||||||| |||||||| ||||||||||| Sbjct: 9056543 tgagctcccaagtagtgggagaggaaagtgatc 9056575
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 306 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 364 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11971932 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11971991 Query: 365 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 424 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11971992 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11972051 Query: 425 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 484 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11972052 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11972111 Query: 485 gaaatagaacgtgaaaccgtgctgagctcc 514 |||||||||||||||||||||||||||||| Sbjct: 11972112 gaaatagaacgtgaaaccgtgctgagctcc 11972141 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 507 tgagctcccaagcagtgggaggggaaagtgatc 539 |||||||||||| |||||||| ||||||||||| Sbjct: 9128240 tgagctcccaagtagtgggagaggaaagtgatc 9128272
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 285 bits (144), Expect = 8e-74 Identities = 227/253 (89%), Gaps = 5/253 (1%) Strand = Plus / Plus Query: 328 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 387 |||| |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 373 aaagtatcattagcttatgctttgacccgagtagcatgggacacgtggaatcccgtgtga 432 Query: 388 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 447 |||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||| Sbjct: 433 atcagcaaggaccaccttgcaaggctaaatactcttgggtgaccaatagtgaagtagtac 492 Query: 448 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 507 | |||||||| ||||||||||||||| | |||| ||||||||||||| ||||| | | Sbjct: 493 catgagggaagggtgaaaagaacccctattggggagtgaaatagaacatgaaaac---at 549 Query: 508 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 567 |||| ||||||||||||||| | || | ||||||||||||||||||||||||||||| Sbjct: 550 aagctaccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgag 607 Query: 568 ccggcgactcata 580 ||||||||||||| Sbjct: 608 ccggcgactcata 620 Score = 133 bits (67), Expect = 7e-28 Identities = 154/181 (85%), Gaps = 4/181 (2%) Strand = Plus / Plus Query: 127 gcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaa 186 |||| ||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 149 gcagacaagaga-aacctggtgaactgaaacatcttagtagccagaggaaaataaagcaa 207 Query: 187 aagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggt 246 ||| |||||| |||||| ||||||||||| |||| |||||||||||| |||| ||||| Sbjct: 208 aagttattcccatagtagtggcgagcgaaaagggaacagcctaaaccgctaaaatggggt 267 Query: 247 tgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctag 306 | || |||||||| ||| ||||| |||||| |||||| || |||| | | ||||||| Sbjct: 268 t---ggggagcaataaaagtattgtgttgctagacgaagcagtggagttctgaaccctag 324 Query: 307 a 307 | Sbjct: 325 a 325
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 276 bits (139), Expect = 8e-71 Identities = 204/225 (90%), Gaps = 3/225 (1%) Strand = Plus / Plus Query: 352 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 411 |||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||| Sbjct: 337 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagg 396 Query: 412 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 471 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 397 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 456 Query: 472 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 531 ||| ||| ||||||||||||| |||||||| | ||| |||||||||||||| || Sbjct: 457 cccgtaggggagtgaaatagaacatgaaaccg---taagcctacaagcagtgggaggaga 513 Query: 532 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 576 | |||||||||||||||||||||||||||||||||||||||| Sbjct: 514 atagaatctctgaccgcgtgcctgttgaagaatgagccggcgact 558 Score = 184 bits (93), Expect = 2e-43 Identities = 185/212 (87%), Gaps = 4/212 (1%) Strand = Plus / Plus Query: 23 gaagggcgtagcaagcgacgaaatgct-tcggggagttgaaaataagcatagatccggag 81 |||||||||| |||||||||||||||| |||| |||| || |||| || ||||||||| Sbjct: 7 gaagggcgtaacaagcgacgaaatgctctcggagagtcgagaataggct--gatccggag 64 Query: 82 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 141 || ||| |||||| ||||| |||||||| |||||||| || |||| | ||||| || Sbjct: 65 atccccgaatagggtaacctaataaactgc-tgctgaatatataggcagacgagagataa 123 Query: 142 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 201 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 124 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctcag 183 Query: 202 tagcggcgagcgaaatgggagcagcctaaacc 233 ||| |||||||||||||||| ||||||||||| Sbjct: 184 tagtggcgagcgaaatgggaacagcctaaacc 215
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 274 bits (138), Expect = 3e-70 Identities = 141/142 (99%) Strand = Plus / Minus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19434061 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 19434002 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 19434001 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 19433942 Query: 138 acaacctggcgaactgaaacat 159 |||||||||||||||||||||| Sbjct: 19433941 acaacctggcgaactgaaacat 19433920 Score = 83.8 bits (42), Expect = 6e-13 Identities = 42/42 (100%) Strand = Plus / Minus Query: 527 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 568 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 12182494 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 12182453 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 445 taccgtgagggaaaggtgaaaagaacc 471 |||||||||||||||||||||| |||| Sbjct: 14553517 taccgtgagggaaaggtgaaaataacc 14553543
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 274 bits (138), Expect = 3e-70 Identities = 141/142 (99%) Strand = Plus / Minus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51588 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 51529 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 51528 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 51469 Query: 138 acaacctggcgaactgaaacat 159 |||||||||||||||||||||| Sbjct: 51468 acaacctggcgaactgaaacat 51447
>dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0475F05 Length = 147522 Score = 274 bits (138), Expect = 3e-70 Identities = 141/142 (99%) Strand = Plus / Minus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119552 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 119493 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119492 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 119433 Query: 138 acaacctggcgaactgaaacat 159 |||||||||||||||||||||| Sbjct: 119432 acaacctggcgaactgaaacat 119411
>emb|AJ535053.1|OSA535053 Oryza sativa (japonica cultivar-group) pdr2 gene for PDR-like ABC transporter, exons 1-22 Length = 15112 Score = 274 bits (138), Expect = 3e-70 Identities = 141/142 (99%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6070 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 6129 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 6130 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 6189 Query: 138 acaacctggcgaactgaaacat 159 |||||||||||||||||||||| Sbjct: 6190 acaacctggcgaactgaaacat 6211
>dbj|AK059621.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H01, full insert sequence Length = 1729 Score = 270 bits (136), Expect = 5e-69 Identities = 139/140 (99%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1590 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 1649 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1650 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 1709 Query: 138 acaacctggcgaactgaaac 157 |||||||||||||||||||| Sbjct: 1710 acaacctggcgaactgaaac 1729
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 266 bits (134), Expect = 7e-68 Identities = 265/308 (86%), Gaps = 3/308 (0%) Strand = Plus / Plus Query: 274 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 333 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 302 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 361 Query: 334 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 393 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 362 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 421 Query: 394 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 453 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 422 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 481 Query: 454 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 513 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 482 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 538 Query: 514 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 573 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 539 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 598 Query: 574 actcatag 581 ||| |||| Sbjct: 599 acttatag 606 Score = 258 bits (130), Expect = 2e-65 Identities = 225/256 (87%), Gaps = 1/256 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||| ||||||||| | ||||||||||||||||||||||| || Sbjct: 31 cctaggcacccagag-acgaagaagggcgtggtaagcgacgaaatgcttcggggagctgc 89 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 || ||||||||||||| ||| ||| |||||| |||||| || ||| | ||||||||| Sbjct: 90 gaacaagcatagatccgaagacccccgaatagggcaacctcttgtactacttgctgaatc 149 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 ||| ||| | |||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 150 cataggcaagaaagagataacctggcgaactgaaacatcttagtagccagaggaaaagaa 209 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||| ||||||||||||||||| |||| |||||||||||| |||| | Sbjct: 210 agcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaaccgcgaaagc 269 Query: 242 ggggttgtgggagagc 257 |||||||||||||||| Sbjct: 270 ggggttgtgggagagc 285
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 266 bits (134), Expect = 7e-68 Identities = 265/308 (86%), Gaps = 3/308 (0%) Strand = Plus / Minus Query: 274 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 333 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 124963 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 124904 Query: 334 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 393 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 124903 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 124844 Query: 394 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 453 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 124843 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 124784 Query: 454 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 513 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 124783 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 124727 Query: 514 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 573 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 124726 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 124667 Query: 574 actcatag 581 ||| |||| Sbjct: 124666 acttatag 124659 Score = 266 bits (134), Expect = 7e-68 Identities = 265/308 (86%), Gaps = 3/308 (0%) Strand = Plus / Plus Query: 274 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 333 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 94903 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 94962 Query: 334 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 393 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 94963 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 95022 Query: 394 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 453 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 95023 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 95082 Query: 454 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 513 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 95083 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 95139 Query: 514 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 573 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 95140 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 95199 Query: 574 actcatag 581 ||| |||| Sbjct: 95200 acttatag 95207 Score = 258 bits (130), Expect = 2e-65 Identities = 225/256 (87%), Gaps = 1/256 (0%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||| ||||||||| | ||||||||||||||||||||||| || Sbjct: 125234 cctaggcacccagag-acgaagaagggcgtggtaagcgacgaaatgcttcggggagctgc 125176 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 || ||||||||||||| ||| ||| |||||| |||||| || ||| | ||||||||| Sbjct: 125175 gaacaagcatagatccgaagacccccgaatagggcaacctcttgtactacttgctgaatc 125116 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 ||| ||| | |||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 125115 cataggcaagaaagagataacctggcgaactgaaacatcttagtagccagaggaaaagaa 125056 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||| ||||||||||||||||| |||| |||||||||||| |||| | Sbjct: 125055 agcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaaccgcgaaagc 124996 Query: 242 ggggttgtgggagagc 257 |||||||||||||||| Sbjct: 124995 ggggttgtgggagagc 124980 Score = 258 bits (130), Expect = 2e-65 Identities = 225/256 (87%), Gaps = 1/256 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||| ||||||||| | ||||||||||||||||||||||| || Sbjct: 94632 cctaggcacccagag-acgaagaagggcgtggtaagcgacgaaatgcttcggggagctgc 94690 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 || ||||||||||||| ||| ||| |||||| |||||| || ||| | ||||||||| Sbjct: 94691 gaacaagcatagatccgaagacccccgaatagggcaacctcttgtactacttgctgaatc 94750 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 181 ||| ||| | |||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 94751 cataggcaagaaagagataacctggcgaactgaaacatcttagtagccagaggaaaagaa 94810 Query: 182 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 241 |||||||||||||||| ||||||||||||||||| |||| |||||||||||| |||| | Sbjct: 94811 agcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaaccgcgaaagc 94870 Query: 242 ggggttgtgggagagc 257 |||||||||||||||| Sbjct: 94871 ggggttgtgggagagc 94886
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 260 bits (131), Expect = 5e-66 Identities = 205/229 (89%), Gaps = 3/229 (1%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 378 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 437 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 438 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 497 Query: 473 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 532 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 498 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 554 Query: 533 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||| ||||||||||||||||||||| |||| Sbjct: 555 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttatag 603 Score = 167 bits (84), Expect = 5e-38 Identities = 183/216 (84%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||| |||||||||| || |||||||| ||| |||| || ||| || |||||| ||||| Sbjct: 33 acgacgaagggcgtactaatcgacgaaacgctccgggaagctgacaagaagcattgatcc 92 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 |||||| ||| |||||| |||||| || |||| | ||||||| || || | |||| Sbjct: 93 ggagatccccgaatagggcaacctcttgaactctccgctgaataaataggcggagcagag 152 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 153 acaacctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 212 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaacc 233 |||||||||||||||||| |||| ||| ||||||| Sbjct: 213 ttagtagcggcgagcgaaaggggaacagtctaaacc 248
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 260 bits (131), Expect = 5e-66 Identities = 205/229 (89%), Gaps = 3/229 (1%) Strand = Plus / Minus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 115284 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 115225 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 115224 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 115165 Query: 473 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 532 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 115164 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 115108 Query: 533 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||| ||||||||||||||||||||| |||| Sbjct: 115107 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttatag 115059 Score = 260 bits (131), Expect = 5e-66 Identities = 205/229 (89%), Gaps = 3/229 (1%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 86704 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 86763 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 86764 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 86823 Query: 473 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 532 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 86824 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 86880 Query: 533 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||| ||||||||||||||||||||| |||| Sbjct: 86881 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttatag 86929 Score = 167 bits (84), Expect = 5e-38 Identities = 183/216 (84%) Strand = Plus / Minus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||| |||||||||| || |||||||| ||| |||| || ||| || |||||| ||||| Sbjct: 115630 acgacgaagggcgtactaatcgacgaaacgctccgggaagctgacaagaagcattgatcc 115571 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 |||||| ||| |||||| |||||| || |||| | ||||||| || || | |||| Sbjct: 115570 ggagatccccgaatagggcaacctcttgaactctccgctgaataaataggcggagcagag 115511 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115510 acaacctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 115451 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaacc 233 |||||||||||||||||| |||| ||| ||||||| Sbjct: 115450 ttagtagcggcgagcgaaaggggaacagtctaaacc 115415 Score = 167 bits (84), Expect = 5e-38 Identities = 183/216 (84%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||| |||||||||| || |||||||| ||| |||| || ||| || |||||| ||||| Sbjct: 86358 acgacgaagggcgtactaatcgacgaaacgctccgggaagctgacaagaagcattgatcc 86417 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 |||||| ||| |||||| |||||| || |||| | ||||||| || || | |||| Sbjct: 86418 ggagatccccgaatagggcaacctcttgaactctccgctgaataaataggcggagcagag 86477 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86478 acaacctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 86537 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaacc 233 |||||||||||||||||| |||| ||| ||||||| Sbjct: 86538 ttagtagcggcgagcgaaaggggaacagtctaaacc 86573
>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1109A06 Length = 171438 Score = 252 bits (127), Expect = 1e-63 Identities = 133/135 (98%) Strand = Plus / Minus Query: 447 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 506 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 108050 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 107991 Query: 507 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 566 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107990 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 107931 Query: 567 gccggcgactcatag 581 ||||||||||||||| Sbjct: 107930 gccggcgactcatag 107916
>gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6393 Score = 246 bits (124), Expect = 7e-62 Identities = 205/229 (89%), Gaps = 6/229 (2%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 410 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 469 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 470 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 529 Query: 473 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 532 || | ||| ||||||||||||| ||||||||| | ||| |||||||||||| |||| Sbjct: 530 ccggaggggagtgaaatagaacatgaaaccgtcc---gctgacaagcagtggga--ggaa 584 Query: 533 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 | ||| ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 585 atagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttatag 632 Score = 95.6 bits (48), Expect = 2e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 133 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 192 ||||| ||||| || ||| ||||||||||||||| || ||||||||||||||||| |||| Sbjct: 148 aagaggcaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcga 207 Query: 193 ttcccgtagtagcggcgagcgaaatgggagcagcctaaac 232 || || ||||||||||||||||| || | |||||||||| Sbjct: 208 tttcctgagtagcggcgagcgaaacggaatcagcctaaac 247
>gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2619 Score = 246 bits (124), Expect = 7e-62 Identities = 205/229 (89%), Gaps = 6/229 (2%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 490 Query: 473 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 532 || | ||| |||||||||||||| |||||||| | ||| |||||||||||| |||| Sbjct: 491 ccggaggggagtgaaatagaacgcgaaaccgtcc---gctgacaagcagtggga--ggaa 545 Query: 533 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||| ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 546 gaagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttatag 593 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Plus Query: 133 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 192 ||||||||||| || ||| ||||||||||||||| || |||||||||||||||||||||| Sbjct: 140 aagagacaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaaagcga 199 Query: 193 ttcccgtagtagcggcgagcgaa 215 || || ||||||||||||||||| Sbjct: 200 tttccttagtagcggcgagcgaa 222
>gb|DQ160045.1| Taraxacum officinale To45-1 mRNA, partial sequence Length = 329 Score = 240 bits (121), Expect = 4e-60 Identities = 145/153 (94%) Strand = Plus / Minus Query: 281 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 340 |||||| || || ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 329 cgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 270 Query: 341 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 400 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 210 Query: 401 accttgcaaggctaaatactcctgggtgaccga 433 |||||||||||||||||||||||| | |||||| Sbjct: 209 accttgcaaggctaaatactcctgcgggaccga 177
>dbj|AP006444.1| Brassica napus mitochondrial DNA, complete genome Length = 221853 Score = 236 bits (119), Expect = 7e-59 Identities = 160/171 (93%), Gaps = 2/171 (1%) Strand = Plus / Minus Query: 18 acgaggaagggcgtagcaagcgacgaaa-tgcttcggggagttgaaaataagcatagatc 76 ||||||||| |||||| ||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 89837 acgaggaagagcgtagtaagcgacgaaaatgcttcggggagttgaaaataagcgtagatc 89778 Query: 77 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 136 |||||||||| ||||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 89777 cggagattccggaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaaga 89719 Query: 137 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 187 ||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 89718 gacaacctggcgaactgaaacatcttactagccagaggaaaagaaagcaaa 89668 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 427 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 120438 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 120483
>gb|AC172860.1| Brassica rapa subsp. pekinensis clone KBrB042G11, complete sequence Length = 124347 Score = 236 bits (119), Expect = 7e-59 Identities = 160/171 (93%), Gaps = 2/171 (1%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaa-tgcttcggggagttgaaaataagcatagatc 76 ||||||||| |||||| ||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 433 acgaggaagagcgtagtaagcgacgaaaatgcttcggggagttgaaaataagcgtagatc 492 Query: 77 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 136 |||||||||| ||||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 493 cggagattccggaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaaga 551 Query: 137 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 187 ||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 552 gacaacctggcgaactgaaacatcttactagccagaggaaaagaaagcaaa 602 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 427 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 42056 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 42101
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 234 bits (118), Expect = 3e-58 Identities = 207/236 (87%), Gaps = 3/236 (1%) Strand = Plus / Plus Query: 346 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 405 ||||| |||| ||||||||||| |||||| ||||||||||||||| || |||||||||| Sbjct: 380 gctctaacccaagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctc 439 Query: 406 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 465 ||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 440 gcaaggctaaatacttctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaa 499 Query: 466 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 525 |||||||||| ||| ||||||| ||||| |||||||| | ||| ||||||||||| Sbjct: 500 agaacccccataggggagtgaaaaagaacatgaaaccg---taggctttcaagcagtggg 556 Query: 526 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 || ||| | |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 557 agaagaattttatctttgaccgcgtgcctgttgaagaatgagccggcgactcatag 612 Score = 188 bits (95), Expect = 1e-44 Identities = 187/215 (86%), Gaps = 2/215 (0%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||| ||||||||||| ||||||||||| |||||||||||| ||||| | | ||||||| Sbjct: 46 acgaagaagggcgtagtaagcgacgaaacgcttcggggagtcgaaaacagacgtagatcc 105 Query: 78 ggagattcccaaataggtcaacct-tttaaactgcctgctgaatccatgagcaggcaaga 136 |||||||||| ||| || |||| ||| |||||| ||||||| ||| ||| | |||| Sbjct: 106 ggagattcccgaatggggtaacccctttgtactgcc-gctgaattcataagcggataaga 164 Query: 137 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 196 |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| | Sbjct: 165 gacaacctggtgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgatttc 224 Query: 197 cgtagtagcggcgagcgaaatgggagcagcctaaa 231 | ||||||||||||||||||||||| |||||||| Sbjct: 225 ctgagtagcggcgagcgaaatgggagaagcctaaa 259
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 234 bits (118), Expect = 3e-58 Identities = 243/284 (85%), Gaps = 3/284 (1%) Strand = Plus / Plus Query: 298 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 357 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 4370 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 4429 Query: 358 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 417 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 4430 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 4489 Query: 418 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 477 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4490 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 4549 Query: 478 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 537 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 4550 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 4606 Query: 538 tctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 4607 tctttgaccgcgtgcctgttgaagaatgagccggcgactcatag 4650 Score = 218 bits (110), Expect = 2e-53 Identities = 189/214 (88%), Gaps = 1/214 (0%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||| ||||||||||| |||||||||||||||||||||||| ||||| | |||||||||| Sbjct: 4079 acgaagaagggcgtagtaagcgacgaaatgcttcggggagtcgaaaacaggcatagatcc 4138 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 |||||||||| ||| || |||| || |||||| ||||||||||| || | ||||| Sbjct: 4139 ggagattcccgaatggggtaaccccttgtactgcc-gctgaatccataggcggataagag 4197 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 | ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 4198 agaacctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcgattccc 4257 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaa 231 ||||||||||||||||||||||| |||||||| Sbjct: 4258 tgagtagcggcgagcgaaatgggagaagcctaaa 4291
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 234 bits (118), Expect = 3e-58 Identities = 243/284 (85%), Gaps = 3/284 (1%) Strand = Plus / Plus Query: 298 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 357 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 358 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 417 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 418 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 477 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 478 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 537 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573 Query: 538 tctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactcatag 617 Score = 210 bits (106), Expect = 4e-51 Identities = 188/214 (87%), Gaps = 1/214 (0%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||| ||||||||||| |||||||||||||||||||||||| ||||| | |||||||||| Sbjct: 46 acgaagaagggcgtagtaagcgacgaaatgcttcggggagtcgaaaacaggcatagatcc 105 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 |||||||||| ||| || |||| || |||||| ||||||| ||| || | ||||| Sbjct: 106 ggagattcccgaatggggtaaccccttgtactgcc-gctgaatacataggcggataagag 164 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 | ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 165 agaacctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcgattccc 224 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaa 231 ||||||||||||||||||||||| |||||||| Sbjct: 225 tgagtagcggcgagcgaaatgggagaagcctaaa 258
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 234 bits (118), Expect = 3e-58 Identities = 243/284 (85%), Gaps = 3/284 (1%) Strand = Plus / Plus Query: 298 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 357 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 358 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 417 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 418 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 477 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 478 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 537 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573 Query: 538 tctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactcatag 617 Score = 218 bits (110), Expect = 2e-53 Identities = 189/214 (88%), Gaps = 1/214 (0%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||| ||||||||||| |||||||||||||||||||||||| ||||| | |||||||||| Sbjct: 46 acgaagaagggcgtagtaagcgacgaaatgcttcggggagtcgaaaacaggcatagatcc 105 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 |||||||||| ||| || |||| || |||||| ||||||||||| || | ||||| Sbjct: 106 ggagattcccgaatggggtaaccccttgtactgcc-gctgaatccataggcggataagag 164 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 | ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 165 agaacctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcgattccc 224 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaa 231 ||||||||||||||||||||||| |||||||| Sbjct: 225 tgagtagcggcgagcgaaatgggagaagcctaaa 258
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 232 bits (117), Expect = 1e-57 Identities = 180/201 (89%) Strand = Plus / Plus Query: 300 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 359 ||||||||||| | |||||||||| |||| |||| ||||||||||| |||| ||||| Sbjct: 332 accctagatggtgagagtccagtagtataaagtatcattagcttatgctttgactcgagt 391 Query: 360 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 419 |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 392 agcatgggacacgtggaatcccgtgtgaatcagcaaggatcaccttgcaaggctaaatac 451 Query: 420 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 479 || ||||||||| |||| |||||||||||||||||||| ||||||||||||| | | ||| Sbjct: 452 tcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaacctctactgg 511 Query: 480 gtagtgaaatagaacgtgaaa 500 | ||||||||||||| ||||| Sbjct: 512 ggagtgaaatagaacatgaaa 532 Score = 172 bits (87), Expect = 8e-40 Identities = 180/207 (86%), Gaps = 3/207 (1%) Strand = Plus / Plus Query: 42 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 101 |||||||||||||||||| ||||||| ||||||||||||||||||| ||||||| ||||| Sbjct: 68 gaaatgcttcggggagttaaaaataaacatagatccggagattcccgaataggtaaacct 127 Query: 102 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 161 || |||||| ||||| | |||||| |||| ||| ||| ||||||| |||||||| ||||| Sbjct: 128 ttaaaactg-ctgcttattccatg-gcagacaaaaga-aacctggtgaactgaatcatct 184 Query: 162 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 221 |||||| |||||||||| |||||||||| ||| || |||||| |||||| |||| |||| Sbjct: 185 tagtagacagaggaaaataaagcaaaagttattaccatagtagtggcgagtgaaaaggga 244 Query: 222 gcagcctaaaccgtgaaaacggggttg 248 |||||||||||| |||| ||||||| Sbjct: 245 acagcctaaaccgctaaaatggggttg 271 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 539 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 580 ||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 566 ctctgactgcgttcctgttgaagaatgagccggcgactcata 607
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 232 bits (117), Expect = 1e-57 Identities = 202/229 (88%), Gaps = 6/229 (2%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 398 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 457 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 458 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 517 Query: 473 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 532 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 518 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 574 Query: 533 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 | | | |||||||||||||||||||||||||||||||||||| |||| Sbjct: 575 a---agccctgaccgcgtgcctgttgaagaatgagccggcgacttatag 620 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 134 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 193 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 149 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 208 Query: 194 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 234 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 209 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 249 Score = 75.8 bits (38), Expect = 1e-10 Identities = 85/100 (85%), Gaps = 1/100 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||| ||||||||||| || |||||||| ||||||||||| || Sbjct: 18 cctaggcacccagag-acgatgaagggcgtagtaaccgacgaaacgcttcggggagctgg 76 Query: 62 aaataagcatagatccggagattcccaaataggtcaacct 101 ||| |||| | |||||| |||||||| |||||| |||||| Sbjct: 77 aaacaagctttgatccgtagattcccgaatagggcaacct 116
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 232 bits (117), Expect = 1e-57 Identities = 202/229 (88%), Gaps = 6/229 (2%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 2167 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 2226 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 2227 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 2286 Query: 473 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 532 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 2287 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 2343 Query: 533 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 | | | |||||||||||||||||||||||||||||||||||| |||| Sbjct: 2344 a---agccctgaccgcgtgcctgttgaagaatgagccggcgacttatag 2389 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 134 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 193 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 1915 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 1974 Query: 194 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 234 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 1975 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 2015 Score = 75.8 bits (38), Expect = 1e-10 Identities = 85/100 (85%), Gaps = 1/100 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||| ||||||||||| || |||||||| ||||||||||| || Sbjct: 1784 cctaggcacccagag-acgatgaagggcgtagtaaccgacgaaacgcttcggggagctgg 1842 Query: 62 aaataagcatagatccggagattcccaaataggtcaacct 101 ||| |||| | |||||| |||||||| |||||| |||||| Sbjct: 1843 aaacaagctttgatccgtagattcccgaatagggcaacct 1882
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 232 bits (117), Expect = 1e-57 Identities = 206/235 (87%), Gaps = 3/235 (1%) Strand = Plus / Plus Query: 347 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 406 |||| |||||||||||||| |||||||| || | |||||||||||| |||||||||| | Sbjct: 338 ctctaacccgagtagcatgaggcacgtgaaaccttgtgtgaatcagcgaggaccacctcg 397 Query: 407 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 466 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 398 taaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaa 457 Query: 467 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 526 ||||||||| |||| ||||||||||| |||||||| | ||| |||||||||||| Sbjct: 458 gaacccccactggggagtgaaatagataatgaaaccg---taagcctacaagcagtggga 514 Query: 527 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 || || | || ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 515 ggaaaatataatttctgaccgcgtgcctgttgaagaatgagccggcgacttatag 569 Score = 139 bits (70), Expect = 1e-29 Identities = 88/94 (93%) Strand = Plus / Plus Query: 140 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 199 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 125 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatttcctt 184 Query: 200 agtagcggcgagcgaaatgggagcagcctaaacc 233 ||||| ||||||||||| || | ||||||||||| Sbjct: 185 agtagtggcgagcgaaacggaatcagcctaaacc 218 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcgg 53 |||| ||||||||||| ||||||||||| ||||||| Sbjct: 7 acgaagaagggcgtagtaagcgacgaaacgcttcgg 42
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 228 bits (115), Expect = 2e-56 Identities = 198/224 (88%), Gaps = 5/224 (2%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 376 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 435 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 || |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 436 tacatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 495 Query: 473 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 532 || ||| ||||||| ||| | |||||||| || ||| |||||||||||||||| Sbjct: 496 ccgcaggggagtgaaaaagatcatgaaaccg---tgtgcttacaagcagtgggagggg-- 550 Query: 533 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 576 ||| | |||||||||||||||||||||||||||||||||||| Sbjct: 551 cctgagccctgaccgcgtgcctgttgaagaatgagccggcgact 594 Score = 145 bits (73), Expect = 2e-31 Identities = 166/197 (84%) Strand = Plus / Plus Query: 38 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 97 |||||| | ||| ||||||| || || ||||| | ||||||||||||||| ||| || || Sbjct: 53 cgacgatacgctccggggagctggaagtaagcttcgatccggagattcccgaatggggca 112 Query: 98 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 157 |||| ||| |||||||||| ||| ||||| |||| |||| || |||||||||| Sbjct: 113 acctcaaggactccctgctgaattcataggcagggtagaggaaacccggtgaactgaaac 172 Query: 158 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 217 |||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 173 atcttagtagccggaggaaaagaaagcaaacgcgattcccttagtagcggcgagcgaaac 232 Query: 218 gggagcagcctaaaccg 234 |||| |||||||||||| Sbjct: 233 gggaccagcctaaaccg 249
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 315 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 374 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 375 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 434 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 435 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 494 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 495 gtgaaa 500 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 42 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 100 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 101 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 160 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 161 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 220 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 221 agcagcctaa 230 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 539 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 580 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 315 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 374 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 375 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 434 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 435 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 494 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 495 gtgaaa 500 ||||| Sbjct: 503 atgaaa 508 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 42 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 100 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 101 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 160 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 161 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 220 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 221 agcagcctaa 230 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 539 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 580 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 582
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 315 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 374 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 375 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 434 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 435 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 494 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 495 gtgaaa 500 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 42 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 100 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 101 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 160 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 161 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 220 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 221 agcagcctaa 230 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 539 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 580 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 315 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 374 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 375 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 434 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 435 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 494 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 495 gtgaaa 500 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 42 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 100 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 101 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 160 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 161 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 220 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 221 agcagcctaa 230 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 539 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 580 |||||||| ||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccacgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 315 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 374 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 375 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 434 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 435 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 494 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 495 gtgaaa 500 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 42 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 100 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 101 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 160 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 161 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 220 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 221 agcagcctaa 230 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 539 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 580 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 315 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 374 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 375 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 434 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 435 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 494 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 495 gtgaaa 500 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 159/182 (87%), Gaps = 4/182 (2%) Strand = Plus / Plus Query: 42 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 100 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 101 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 160 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 161 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 220 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 221 ag 222 || Sbjct: 245 ag 246 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 539 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 580 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 315 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 374 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 375 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 434 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 435 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 494 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 495 gtgaaa 500 ||||| Sbjct: 503 atgaaa 508 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 42 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 100 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 101 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 160 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 161 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 220 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 221 agcagcctaa 230 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 539 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 580 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 582
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 315 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 374 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 375 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 434 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 435 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 494 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 495 gtgaaa 500 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 42 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 100 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 101 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 160 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 161 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 220 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 221 agcagcctaa 230 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 539 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 580 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 315 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 374 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 375 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 434 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 435 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 494 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 495 gtgaaa 500 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 42 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 100 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 101 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 160 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 161 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 220 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 221 agcagcctaa 230 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 539 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 580 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 315 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 374 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 375 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 434 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 435 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 494 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 495 gtgaaa 500 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 42 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 100 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 101 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 160 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 161 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 220 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 221 agcagcctaa 230 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 539 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 580 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 315 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 374 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 375 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 434 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 435 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 494 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 495 gtgaaa 500 ||||| Sbjct: 504 atgaaa 509 Score = 155 bits (78), Expect = 2e-34 Identities = 166/190 (87%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 42 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 100 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 101 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 160 ||| ||||||| |||| | |||||| | || ||||||| |||| |||||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggcgaactgaaacatc 184 Query: 161 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 220 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 221 agcagcctaa 230 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 539 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 580 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 315 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 374 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 375 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 434 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 435 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 494 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 495 gtgaaa 500 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 42 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 100 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 101 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 160 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 161 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 220 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 221 agcagcctaa 230 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 539 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 580 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 315 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 374 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 375 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 434 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 435 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 494 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 495 gtgaaa 500 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 42 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 100 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 101 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 160 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 161 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 220 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 221 agcagcctaa 230 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 539 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 580 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 315 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 374 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 375 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 434 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 435 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 494 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 495 gtgaaa 500 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 42 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 100 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 101 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 160 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 161 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 220 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 221 agcagcctaa 230 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 539 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 580 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 315 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 374 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 375 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 434 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 435 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 494 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 495 gtgaaa 500 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 42 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 100 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 101 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 160 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 161 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 220 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 221 agcagcctaa 230 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 539 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 580 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 216 bits (109), Expect = 6e-53 Identities = 199/226 (88%), Gaps = 6/226 (2%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 355 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 414 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa-gaacc 471 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 415 taaatactcctgggtaaccgatagtgaagtagtaccgtgagggaaaggtgaaaaagaacc 474 Query: 472 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 531 || | ||| ||||||| ||||| ||||||| || |||| |||||||||||| ||| Sbjct: 475 cctggaggggagtgaaaaagaacatgaaacc---ctaagctgacaagcagtggga--gga 529 Query: 532 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 577 | | |||||||||||||||||||||||||||||||||||||| Sbjct: 530 cttttaagtctgaccgcgtgcctgttgaagaatgagccggcgactc 575 Score = 123 bits (62), Expect = 7e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 139 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 198 ||||| || ||| |||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 64 caacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcgattcccc 123 Query: 199 tagtagcggcgagcgaaatgggagcagcctaaac 232 |||||||||||||||||| |||| |||||||||| Sbjct: 124 tagtagcggcgagcgaaaagggaacagcctaaac 157
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 212 bits (107), Expect = 1e-51 Identities = 196/225 (87%), Gaps = 3/225 (1%) Strand = Plus / Plus Query: 352 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 411 |||||||||||||| |||||||| || | ||||||||||||| |||||||||| | |||| Sbjct: 784 acccgagtagcatgaggcacgtgaaacctcgtgtgaatcagcgaggaccacctcgtaagg 843 Query: 412 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 471 |||||||||||| ||||| |||||| |||| ||||||||||||||||||||||||||||| Sbjct: 844 ctaaatactcctaggtgatcgatagtgaagaagtaccgtgagggaaaggtgaaaagaacc 903 Query: 472 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 531 |||| ||| ||||||||||| |||||||| | |||| ||||||||||||| || Sbjct: 904 cccataggggagtgaaatagactatgaaaccg---taagcttacaagcagtgggagaaga 960 Query: 532 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 576 | | |||| ||||||||||||||||||||||||||||||||||| Sbjct: 961 atctaatctttgaccgcgtgcctgttgaagaatgagccggcgact 1005 Score = 172 bits (87), Expect = 8e-40 Identities = 187/218 (85%), Gaps = 3/218 (1%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||| ||||||||||| ||||||||||||||||||| | || || ||| || | || Sbjct: 449 acgatgaagggcgtagaaagcgacgaaatgcttcggttaactgcgaacaag--taaaccc 506 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 |||||||||| |||||| |||||| | ||||||| |||||||| ||| || | ||||| Sbjct: 507 ggagattcccgaatagggcaacctgt-aaactgcttgctgaattcataggcgagtaagag 565 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 ||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 566 acaacctggtgaactgaaacatcttagtaaccagaggaacagaaagcaaaagcgattccc 625 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgt 235 |||||| ||||||||||| |||| ||||||||||||| Sbjct: 626 ttagtagtggcgagcgaaacgggaacagcctaaaccgt 663
>gb|L49155.1|NEHCPRGOLA Neochloris aquatica chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5569 Score = 212 bits (107), Expect = 1e-51 Identities = 196/224 (87%), Gaps = 5/224 (2%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| | Sbjct: 517 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagac 576 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 |||||||||||| | ||||||||||||| |||||| | || ||||||||||||||||||| Sbjct: 577 taaatactcctgagagaccgatagcgaaatagtacagcgatggaaaggtgaaaagaaccc 636 Query: 473 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 532 || ||| ||||||||||||| ||||| || |||||| |||||||||||| ||| Sbjct: 637 ccgtaggggagtgaaatagaacatgaaatcg---tgagctgacaagcagtggga--ggat 691 Query: 533 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 576 ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 692 tttgaaatctgaccgcgtgcctgttgaagaatgagccggcgact 735 Score = 129 bits (65), Expect = 1e-26 Identities = 83/89 (93%) Strand = Plus / Plus Query: 133 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 192 ||||| |||||||| |||||||||||||| ||||||||||||| ||||| |||||||||| Sbjct: 148 aagaggcaacctggtgaactgaaacatctcagtagccagaggagaagaacgcaaaagcga 207 Query: 193 ttcccgtagtagcggcgagcgaaatggga 221 ||||| ||||||||||||||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatggga 236
>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2920 Score = 212 bits (107), Expect = 1e-51 Identities = 140/151 (92%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 601 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 660 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 661 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtaaaaagaaccc 720 Query: 473 ccagtgggtagtgaaatagaacgtgaaaccg 503 || |||| ||||||||||||| |||||||| Sbjct: 721 ccgttggggagtgaaatagaacatgaaaccg 751 Score = 151 bits (76), Expect = 3e-33 Identities = 166/196 (84%) Strand = Plus / Plus Query: 38 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 97 |||||||| ||||||||||| || ||||||| | |||||| |||| ||| |||||| || Sbjct: 45 cgacgaaacgcttcggggagctggcaataagcgttgatccgaagatccccgaatagggca 104 Query: 98 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 157 |||| |||| ||| | ||| ||| || |||||||||| |||| || |||||||||| Sbjct: 105 acctcaagaactacctccctaattcataaggaggcaagagagaacccggtgaactgaaac 164 Query: 158 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 217 |||| ||||||| ||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 165 atctaagtagccggaggaaaagaaagcaaacgcgattcccatagtagcggcgagcgaaaa 224 Query: 218 gggagcagcctaaacc 233 |||| ||||||||||| Sbjct: 225 gggaacagcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgact 576 |||||||||||||||||||||||||||||||||||| Sbjct: 796 ctgaccgcgtgcctgttgaagaatgagccggcgact 831
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 210 bits (106), Expect = 4e-51 Identities = 166/186 (89%) Strand = Plus / Plus Query: 315 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 374 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 375 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 434 ||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccatgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 435 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 494 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 495 gtgaaa 500 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 159/182 (87%), Gaps = 4/182 (2%) Strand = Plus / Plus Query: 42 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 100 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 101 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 160 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 161 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 220 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 221 ag 222 || Sbjct: 245 ag 246 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 539 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 580 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 210 bits (106), Expect = 4e-51 Identities = 205/238 (86%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||| ||||||||||| ||||||||||||||||||||||| || || ||| |||||||| Sbjct: 46 acgaagaagggcgtagtaagcgacgaaatgcttcggggagctgcgaacaagtatagatcc 105 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 | |||||||| |||||| |||||| || ||| |||| ||| ||| | |||| |||| Sbjct: 106 gaagattcccgaatagggcaacctcttgtactacctgtaaaatacataatcaggttagag 165 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 | ||||| | ||||||||||||||||||||| ||||||| | |||||||||||||||||| Sbjct: 166 aaaacctagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgattccc 225 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 255 |||||| ||||||||||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 226 ttagtagtggcgagcgaaacgggaacagcctaaaccgtgaaagcggggttgtgggaga 283 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 357 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 416 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 444 Query: 417 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 476 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 504 Query: 477 tgggtagtgaaatagaacgtgaaacc 502 ||| ||||||||||||| ||||||| Sbjct: 505 aggggagtgaaatagaacatgaaacc 530 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||| |||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttatag 606
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 206 bits (104), Expect = 6e-50 Identities = 140/152 (92%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 691 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 750 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 |||||||||||||||||||||||||||| |||||||| ||||||| ||| |||||||||| Sbjct: 751 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaagggtaaaaagaaccc 810 Query: 473 ccagtgggtagtgaaatagaacgtgaaaccgt 504 || |||| ||||||||||||| ||||||||| Sbjct: 811 ccgttggggagtgaaatagaacatgaaaccgt 842 Score = 145 bits (73), Expect = 2e-31 Identities = 97/105 (92%) Strand = Plus / Plus Query: 129 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 188 |||||||||| |||| || |||||||||||||| ||||||| |||||||||||||||||| Sbjct: 137 aggcaagagagaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaa 196 Query: 189 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 233 ||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 197 gcgattcccttagtagcggcgagcgaaaagggaacagcctaaacc 241 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgact 576 |||||||||||||||||||||||||||||||||||| Sbjct: 895 ctgaccgcgtgcctgttgaagaatgagccggcgact 930
>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CelI gene Length = 3779 Score = 206 bits (104), Expect = 6e-50 Identities = 142/152 (93%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 409 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 468 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 469 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 528 Query: 473 ccagtgggtagtgaaatagaacgtgaaaccgt 504 || || || ||||||||||||| ||||||||| Sbjct: 529 cc-gtagg-agtgaaatagaacatgaaaccgt 558 Score = 123 bits (62), Expect = 7e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 152 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 211 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 tgaaacatcttagtagctggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 223 Query: 212 cgaaatgggagcagcctaaacc 233 |||| |||| ||||||||||| Sbjct: 224 cgaaccgggaacagcctaaacc 245 Score = 73.8 bits (37), Expect = 6e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 540 tctgaccgcgtgcctgttgaagaatgagccggcgact 576 ||||||||||||||||||||||||||||||||||||| Sbjct: 585 tctgaccgcgtgcctgttgaagaatgagccggcgact 621
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 202 bits (102), Expect = 9e-49 Identities = 117/122 (95%) Strand = Plus / Plus Query: 352 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 411 ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 373 acccgagtagcatggggcacgtgaaatcccgtgtgaatccgcaaggaccaccttgcaagg 432 Query: 412 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 471 |||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 433 ctaaatactcctagatgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 492 Query: 472 cc 473 || Sbjct: 493 cc 494 Score = 159 bits (80), Expect = 1e-35 Identities = 98/104 (94%) Strand = Plus / Plus Query: 131 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagc 190 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 147 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaacgc 206 Query: 191 gattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 234 ||||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 207 gattcccttagtagcggcgagcgaagcgggaatagcctaaaccg 250 Score = 69.9 bits (35), Expect = 9e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 543 gaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||| |||| Sbjct: 562 gaccgcgtgcctgttgaagaatgagccggcgacttatag 600 Score = 60.0 bits (30), Expect = 9e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||||||||||||| | | ||||||||||||||||||||||| ||| | || |||||| Sbjct: 46 acgaggaagggcgtggttaccgacgaaatgcttcggggagttggaaagaggctgagatcc 105 Query: 78 ggagat 83 |||||| Sbjct: 106 ggagat 111
>emb|X52737.1|CHCO23S Coleochaete orbicularis chloroplast DNA for transfer RNA-Ala, transfer RNA-Ile and 23S ribosomal RNA Length = 2305 Score = 202 bits (102), Expect = 9e-49 Identities = 135/146 (92%) Strand = Plus / Plus Query: 357 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 416 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 2152 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 2211 Query: 417 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 476 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2212 tactcctgggtgaccgatagcgaagaagtaccgtgagggaaaggtgaaaagaacccccat 2271 Query: 477 tgggtagtgaaatagaacgtgaaacc 502 ||| ||||||||||||| ||||||| Sbjct: 2272 aggggagtgaaatagaacatgaaacc 2297 Score = 174 bits (88), Expect = 2e-40 Identities = 199/236 (84%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||| ||||||||||| ||||||||||||||||||||||| || || ||| ||| |||| Sbjct: 1813 acgaagaagggcgtagtaagcgacgaaatgcttcggggagctgcgaacaagtataaatcc 1872 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 | |||||||| |||||| ||||| || ||| |||| |||| || | |||| |||| Sbjct: 1873 gaagattcccgaatagggtaacctcttgtactacctgtataatcaataatcaggttagag 1932 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 | ||||| | ||||||||||||||||||||| ||||||| | |||||||||||||||||| Sbjct: 1933 aaaacctagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgattccc 1992 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 253 |||||| ||||||||||| |||| | ||||||||||| ||| ||||||||||||| Sbjct: 1993 ttagtagtggcgagcgaaacgggaaccgcctaaaccgttaaagcggggttgtggga 2048
>gb|L42859.1|CRECPRGOL Chlamydomonas mutabilis chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmuI gene Length = 3744 Score = 200 bits (101), Expect = 4e-48 Identities = 201/231 (87%), Gaps = 10/231 (4%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 |||||||||||||| |||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 436 cccgagtagcatggaacacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 495 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 |||||| ||||||||||||||||||||| |||||| | || |||||||||||||| |||| Sbjct: 496 taaatattcctgggtgaccgatagcgaaatagtactgcgaaggaaaggtgaaaagtaccc 555 Query: 473 ccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagggg 530 || |||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 556 ccgttggggagtgaaatagaacatgaaaccgtttgctga-----caagcagtgggagggt 610 Query: 531 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 | | || | |||||||||||||||||||||||||||||||||||| |||| Sbjct: 611 aca--gaac-ctgaccgcgtgcctgttgaagaatgagccggcgacttatag 658 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 148 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 207 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 216 Query: 208 cgagcgaaatgggagcagcctaaacc 233 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 558 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 617 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 618 taaatactcctgggtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaacct 677 Query: 473 ccagtgggtagtgaaatagaacgtgaaaccgt 504 | | | ||||||||||||| ||||||||| Sbjct: 678 ctgaagaggagtgaaatagaacatgaaaccgt 709 Score = 131 bits (66), Expect = 3e-27 Identities = 78/82 (95%) Strand = Plus / Plus Query: 152 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 211 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 tgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 219 Query: 212 cgaaatgggagcagcctaaacc 233 |||| ||||| |||||||||| Sbjct: 220 cgaactgggactagcctaaacc 241 Score = 73.8 bits (37), Expect = 6e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||| |||| Sbjct: 745 ctgaccgcgtgcctgttgaagaatgagccggcgacttatag 785
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 473 ccagtgggtagtgaaatagaacgtgaaaccgt 504 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 148 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 207 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 208 cgagcgaaatgggagcagcctaaac 232 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||| |||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttatag 620 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Plus Query: 47 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 101 ||||||||||| || || |||| | |||||| ||||||||||||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccgaagattcccaaatagggcaacct 127
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 473 ccagtgggtagtgaaatagaacgtgaaaccgt 504 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 148 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 207 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 208 cgagcgaaatgggagcagcctaaacc 233 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||| |||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgacttatag 674 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Plus Query: 47 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 101 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 127
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 198 bits (100), Expect = 1e-47 Identities = 141/152 (92%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 412 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 471 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 |||||||||||| ||||||||||| ||| |||||||| |||||||||||||||||||||| Sbjct: 472 taaatactcctgagtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaagaaccc 531 Query: 473 ccagtgggtagtgaaatagaacgtgaaaccgt 504 || || || ||||||||||||| ||||||||| Sbjct: 532 cc-gtagg-agtgaaatagaacatgaaaccgt 561 Score = 123 bits (62), Expect = 7e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 152 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 211 ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaataaagcaaaagcgattcccgtagtagcggcgag 218 Query: 212 cgaaatgggagcagcctaaacc 233 ||||| |||| ||||||||||| Sbjct: 219 cgaaacgggaacagcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgact 576 |||||||||||||||||||||||||||||||||||| Sbjct: 593 ctgaccgcgtgcctgttgaagaatgagccggcgact 628
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Minus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 151990 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 151931 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 151930 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 151871 Query: 473 ccagtgggtagtgaaatagaacgtgaaaccgt 504 | |||| ||||||||||||| ||||||||| Sbjct: 151870 ctgttggggagtgaaatagaacatgaaaccgt 151839 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 42213 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 42272 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 42273 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 42332 Query: 473 ccagtgggtagtgaaatagaacgtgaaaccgt 504 | |||| ||||||||||||| ||||||||| Sbjct: 42333 ctgttggggagtgaaatagaacatgaaaccgt 42364 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 148 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 207 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 152206 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 152147 Query: 208 cgagcgaaatgggagcagcctaaacc 233 |||||||| |||| ||||||||||| Sbjct: 152146 cgagcgaaccgggaacagcctaaacc 152121 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 148 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 207 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 41997 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 42056 Query: 208 cgagcgaaatgggagcagcctaaacc 233 |||||||| |||| ||||||||||| Sbjct: 42057 cgagcgaaccgggaacagcctaaacc 42082 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||| |||| Sbjct: 151806 tgaccgcgtgcctgttgaagaatgagccggcgacttatag 151767 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||| |||| Sbjct: 42397 tgaccgcgtgcctgttgaagaatgagccggcgacttatag 42436
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 473 ccagtgggtagtgaaatagaacgtgaaaccgt 504 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 148 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 207 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 208 cgagcgaaatgggagcagcctaaacc 233 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||| |||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgacttatag 674 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Plus Query: 47 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 101 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 127
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 473 ccagtgggtagtgaaatagaacgtgaaaccgt 504 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 148 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 207 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 208 cgagcgaaatgggagcagcctaaac 232 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||| |||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttatag 620 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Plus Query: 47 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 101 ||||||||||| || || |||| | |||||| ||||||||||||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccgaagattcccaaatagggcaacct 127
>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA Length = 2603 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 385 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 444 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 445 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 504 Query: 473 ccagtgggtagtgaaatagaacgtgaaaccgt 504 | |||| ||||||||||||| ||||||||| Sbjct: 505 ctgttggggagtgaaatagaacatgaaaccgt 536 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 148 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 207 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 169 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 228 Query: 208 cgagcgaaatgggagcagcctaaacc 233 |||||||| |||| ||||||||||| Sbjct: 229 cgagcgaaccgggaacagcctaaacc 254 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||| |||| Sbjct: 569 tgaccgcgtgcctgttgaagaatgagccggcgacttatag 608
>gb|J01398.1|CRECPRG23 c.reinhardtii (algae) chloroplast 3s, 7s & 23s(5') rrna gene Length = 814 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 470 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 529 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 530 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 589 Query: 473 ccagtgggtagtgaaatagaacgtgaaaccgt 504 | |||| ||||||||||||| ||||||||| Sbjct: 590 ctgttggggagtgaaatagaacatgaaaccgt 621 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 148 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 207 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 254 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 313 Query: 208 cgagcgaaatgggagcagcctaaacc 233 |||||||| |||| ||||||||||| Sbjct: 314 cgagcgaaccgggaacagcctaaacc 339 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||| |||| Sbjct: 654 tgaccgcgtgcctgttgaagaatgagccggcgacttatag 693
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 196 bits (99), Expect = 6e-47 Identities = 199/225 (88%), Gaps = 8/225 (3%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 442 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 501 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 471 |||||||||||||||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 502 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaatggttaaatagaacc 561 Query: 472 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 531 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 562 ccc-gtagg-agtgaaatagaacatgaaaccgttc---gctgacaagcagtgggagggg- 615 Query: 532 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 576 ||| | |||||||||||||||||||||||||||||||||||| Sbjct: 616 gtttga-ccctgaccgcgtgcctgttgaagaatgagccggcgact 659 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 133 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 192 ||||| ||||| || ||| |||||||||||||||||| |||||||||||||||||||||| Sbjct: 141 aagaggcaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaaagcga 200 Query: 193 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 234 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 201 ttcccggagtagcggcgagcgaaacgggaacagcctaaaccg 242
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 196 bits (99), Expect = 6e-47 Identities = 194/225 (86%), Gaps = 3/225 (1%) Strand = Plus / Plus Query: 357 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 416 ||||| ||||| |||||| |||||| | |||||| |||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatctacaaggaccaccttgtaaggctaaa 444 Query: 417 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 476 |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgcgagggaaaggtgaaaagaacccccat 504 Query: 477 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 536 ||| ||||||||||||| ||||||| | |||| |||||||||||||| | | Sbjct: 505 aggggagtgaaatagaacatgaaacc---ataagctttcaagcagtgggaggaggattga 561 Query: 537 atctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 | || ||||||||||||||||||||||||||||||||||| |||| Sbjct: 562 acctttgaccgcgtgcctgttgaagaatgagccggcgacttatag 606 Score = 190 bits (96), Expect = 4e-45 Identities = 201/236 (85%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||| ||||||||||| |||||||||||||||||||||| || || ||||||| |||| Sbjct: 46 acgaagaagggcgtagtcagcgacgaaatgcttcggggagctgcgaacaagcataaatcc 105 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 | |||||||| |||||| ||||| || ||| |||| |||| || | |||| |||| Sbjct: 106 gaagattcccgaatagggtaacctcttgtactacctgtagaattaataatcaggttagag 165 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 | ||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 166 aaaacctagtgaactgaaacatcttagtagctagaggaaaagaaagcaaaagcgattccc 225 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 253 ||||| ||||||||||| |||| |||||||||||| |||| ||||||||||||| Sbjct: 226 tcagtagtggcgagcgaaacgggaacagcctaaaccgcgaaagcggggttgtggga 281
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 473 ccagtgggtagtgaaatagaacgtgaaacc 502 | ||| ||||||||||||| ||||||| Sbjct: 491 ctgtaggggagtgaaatagaacatgaaacc 520 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 148 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 207 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 155 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 214 Query: 208 cgagcgaaatgggagcagcctaaacc 233 |||||||||||||| | ||||||||| Sbjct: 215 cgagcgaaatgggaacggcctaaacc 240 Score = 75.8 bits (38), Expect = 1e-10 Identities = 85/100 (85%), Gaps = 1/100 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||| ||||||||| | || |||||||| ||||||||||| || Sbjct: 10 cctaggcacccagag-acgatgaagggcgtggaaaccgacgaaacgcttcggggagctgg 68 Query: 62 aaataagcatagatccggagattcccaaataggtcaacct 101 ||| ||||| ||||||||||||||| |||||| |||||| Sbjct: 69 aaacaagcaatgatccggagattcccgaatagggcaacct 108 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgact 576 |||||||||||||||||||||||||||||||||||| Sbjct: 554 ctgaccgcgtgcctgttgaagaatgagccggcgact 589
>dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0490D09 Length = 154430 Score = 194 bits (98), Expect = 2e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 461 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 520 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 107567 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 107508 Query: 521 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 570 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107507 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 107458
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 357 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 416 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 3419 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 3478 Query: 417 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 476 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 3479 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 3538 Query: 477 tgggtagtgaaatagaacgtgaaacc 502 ||| ||||||||||||| ||||||| Sbjct: 3539 aggggagtgaaatagaacatgaaacc 3564 Score = 194 bits (98), Expect = 2e-46 Identities = 203/238 (85%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||| ||||||||||| |||||||||||||||| |||||| || || ||| |||||||| Sbjct: 3080 acgaagaagggcgtagtaagcgacgaaatgctttggggagctgcgaacaagtatagatcc 3139 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 137 | |||||||| |||||| |||||| || ||| |||| ||| ||| |||| |||| Sbjct: 3140 gaagattcccgaatagggcaacctcttgtactacctgtaaaatacatagtcaggttagag 3199 Query: 138 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 197 | ||||| | ||||||||||||||||||||| ||||||| | |||||||||||||||||| Sbjct: 3200 aaaacctagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgattccc 3259 Query: 198 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 255 |||||| ||||||||||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 3260 ttagtagtggcgagcgaaacgggaacagcctaaaccgtgaaagcggggttgtgggaga 3317 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||| |||| Sbjct: 3601 tgaccgcgtgcctgttgaagaatgagccggcgacttatag 3640
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 25180 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 25239 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 25240 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 25299 Query: 473 ccagtgggtagtgaaatagaacgtgaaacc 502 | ||| ||||||||||||| ||||||| Sbjct: 25300 ctgtaggggagtgaaatagaacatgaaacc 25329 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 148 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 207 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 24964 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 25023 Query: 208 cgagcgaaatgggagcagcctaaacc 233 |||||||||||||| ||||||||||| Sbjct: 25024 cgagcgaaatgggaacagcctaaacc 25049 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgact 576 |||||||||||||||||||||||||||||||||||| Sbjct: 25363 ctgaccgcgtgcctgttgaagaatgagccggcgact 25398 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 38 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 97 |||||||| ||||||||||| || ||| ||||| ||||||||||||||| |||||| || Sbjct: 24854 cgacgaaacgcttcggggagctggaaacaagcaatgatccggagattcccgaatagggca 24913 Query: 98 acct 101 |||| Sbjct: 24914 acct 24917
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 192 bits (97), Expect = 9e-46 Identities = 136/149 (91%) Strand = Plus / Plus Query: 356 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 415 ||||||||||||||||||| |||||||||||||||| | |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgtgaaatcccgtgtgaatcatcgaggaccacctcgaaaggctaa 60 Query: 416 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 475 ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 61 atactcctgtgtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 476 gtgggtagtgaaatagaacgtgaaaccgt 504 | ||| ||||||||||||| ||||||||| Sbjct: 121 gaggggagtgaaatagaacatgaaaccgt 149 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 549 gtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||| |||| Sbjct: 191 gtgcctgttgaagaatgagccggcgacttatag 223
>gb|L42989.1|CRECPRGOLC Chlamydomonas humicola chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-ChuI gene Length = 4005 Score = 192 bits (97), Expect = 9e-46 Identities = 197/227 (86%), Gaps = 10/227 (4%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 413 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 471 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 472 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 529 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 530 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 576 | | | | |||||||||||||||||||||||||||||||||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgact 622 Score = 103 bits (52), Expect = 6e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 152 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 211 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 237 Query: 212 cgaa 215 |||| Sbjct: 238 cgaa 241
>gb|L42988.1|CRECPRGOLB Chlamydomonas applanata large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2863 Score = 192 bits (97), Expect = 9e-46 Identities = 197/227 (86%), Gaps = 10/227 (4%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 384 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 443 Query: 413 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 471 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 444 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 503 Query: 472 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 529 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 504 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 558 Query: 530 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 576 | | | | |||||||||||||||||||||||||||||||||||| Sbjct: 559 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgact 603 Score = 103 bits (52), Expect = 6e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 152 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 211 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 218 Query: 212 cgaa 215 |||| Sbjct: 219 cgaa 222
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 192 bits (97), Expect = 9e-46 Identities = 196/225 (87%), Gaps = 8/225 (3%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 506 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 565 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 471 |||||||| ||| ||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 566 taaatactactgagtgaccgatagcgaaatagtaccgcgagggaacggttaaatagaacc 625 Query: 472 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 531 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 626 ccc-gtagggagtgaaatagaacatgaaaccgttc---gctgacaagcagtgggaggggt 681 Query: 532 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 576 || | |||||||||||||||||||||||||||||||||||| Sbjct: 682 tag---accctgaccgcgtgcctgttgaagaatgagccggcgact 723 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 133 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 192 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 140 aagaggcaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaagcga 199 Query: 193 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 234 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 200 ttcccggagtagcggcgagcgaaaagggaacagcctaaaccg 241
>emb|X68921.1|CHCHRRNL1 Chloroplast Chlamydomonas humicola rrnL gene, exon 1 Length = 2524 Score = 192 bits (97), Expect = 9e-46 Identities = 197/227 (86%), Gaps = 10/227 (4%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 413 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 471 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 472 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 529 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 530 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 576 | | | | |||||||||||||||||||||||||||||||||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgact 622 Score = 103 bits (52), Expect = 6e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 152 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 211 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 237 Query: 212 cgaa 215 |||| Sbjct: 238 cgaa 241
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 190 bits (96), Expect = 4e-45 Identities = 194/226 (85%), Gaps = 3/226 (1%) Strand = Plus / Plus Query: 356 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 415 ||||||||||||||||| |||||||| ||||||||||| |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgaggaatcccatgtgaatcagcgaggaccacctcgtaaggctaa 60 Query: 416 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 475 ||||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||||||| Sbjct: 61 atactactgtgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 476 gtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagt 535 ||| ||||||||||||| |||||||| | |||| |||||||||||||| | | Sbjct: 121 aaggggagtgaaatagaacatgaaaccg---ttagcttacaagcagtgggaggactattt 177 Query: 536 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 | ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 178 aaagtctgaccgcgtgcctgttgaagaatgagccggcgacttatag 223
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 ||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 aaaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 473 ccagtgggtagtgaaatagaacgtgaaaccgt 504 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 148 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 207 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 216 Query: 208 cgagcgaaatgggagcagcctaaacc 233 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||| |||| Sbjct: 578 tgaccgcgtgcctgttgaagaatgagccggcgacttatag 617 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Plus Query: 47 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 101 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 55 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 109
>gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 6750 Score = 190 bits (96), Expect = 4e-45 Identities = 199/231 (86%), Gaps = 8/231 (3%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 473 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 530 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 531 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||| || |||||||||||||| ||||||||||||||||||||| |||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgacttatag 611 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 148 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 207 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 208 cgagcgaaatgggagcagcctaaacc 233 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261
>emb|X68905.1|CHCFRRNL1 Chloroplast Chlamydomonas frankii rrnL gene, exon 1 Length = 1282 Score = 190 bits (96), Expect = 4e-45 Identities = 199/231 (86%), Gaps = 8/231 (3%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 473 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 530 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 531 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||| || |||||||||||||| ||||||||||||||||||||| |||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgacttatag 611 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 148 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 207 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 208 cgagcgaaatgggagcagcctaaacc 233 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 402 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 461 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 462 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 521 Query: 473 ccagtgggtagtgaaatagaacgtgaaaccgt 504 | |||| ||||||||||||| ||||||||| Sbjct: 522 ctgttggggagtgaaatagaacatgaaaccgt 553 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 148 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 207 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 208 cgagcgaaatgggagcagcctaaacc 233 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||| |||||||||||||||||||||||||||||| |||| Sbjct: 586 tgactgcgtgcctgttgaagaatgagccggcgacttatag 625
>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome Length = 161452 Score = 188 bits (95), Expect = 1e-44 Identities = 199/231 (86%), Gaps = 12/231 (5%) Strand = Plus / Minus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 155833 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 155774 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 471 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 155773 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 155714 Query: 472 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 530 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 155713 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 155657 Query: 531 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 || ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 155656 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgacttatag 155613 Score = 188 bits (95), Expect = 1e-44 Identities = 199/231 (86%), Gaps = 12/231 (5%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 78059 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 78118 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 471 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 78119 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 78178 Query: 472 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 530 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 78179 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 78235 Query: 531 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 || ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 78236 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgacttatag 78279 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Minus Query: 133 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 192 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 156138 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 156079 Query: 193 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 233 |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 156078 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 156038 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Plus Query: 133 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 192 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 77754 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 77813 Query: 193 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 233 |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 77814 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 77854 Score = 42.1 bits (21), Expect = 2.0 Identities = 51/61 (83%) Strand = Plus / Minus Query: 47 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 106 ||||||||||| || || |||||| |||||| |||| ||| |||||| |||||| |||| Sbjct: 156227 gcttcggggagctggtaacaagcatcgatccgaagatccccgaatagggcaacctcttaa 156168 Query: 107 a 107 | Sbjct: 156167 a 156167 Score = 42.1 bits (21), Expect = 2.0 Identities = 51/61 (83%) Strand = Plus / Plus Query: 47 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 106 ||||||||||| || || |||||| |||||| |||| ||| |||||| |||||| |||| Sbjct: 77665 gcttcggggagctggtaacaagcatcgatccgaagatccccgaatagggcaacctcttaa 77724 Query: 107 a 107 | Sbjct: 77725 a 77725
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 186 bits (94), Expect = 5e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Minus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 171123 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 171064 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 171063 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 171004 Query: 473 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 528 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 171003 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 170951 Score = 186 bits (94), Expect = 5e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 121803 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 121862 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 121863 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 121922 Query: 473 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 528 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 121923 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 121975 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Minus Query: 134 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 193 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 171357 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 171298 Query: 194 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 234 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 171297 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 171257 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 134 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 193 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 121569 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 121628 Query: 194 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 234 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 121629 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 121669 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Minus Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgact 576 |||||||||||||||||||||||||||||||||||| Sbjct: 170941 ctgaccgcgtgcctgttgaagaatgagccggcgact 170906 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgact 576 |||||||||||||||||||||||||||||||||||| Sbjct: 121985 ctgaccgcgtgcctgttgaagaatgagccggcgact 122020 Score = 60.0 bits (30), Expect = 9e-06 Identities = 83/100 (83%), Gaps = 1/100 (1%) Strand = Plus / Minus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||| |||||||||||||| |||||||| || ||||||| || Sbjct: 171488 cctaggcacccagag-acgaagaagggcgtagcaaccgacgaaaccctccggggagctgg 171430 Query: 62 aaataagcatagatccggagattcccaaataggtcaacct 101 || |||| ||||||||||||||| |||||| |||||| Sbjct: 171429 aagcaagctctgatccggagattcccgaatagggcaacct 171390 Score = 60.0 bits (30), Expect = 9e-06 Identities = 83/100 (83%), Gaps = 1/100 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||| |||||||||||||| |||||||| || ||||||| || Sbjct: 121438 cctaggcacccagag-acgaagaagggcgtagcaaccgacgaaaccctccggggagctgg 121496 Query: 62 aaataagcatagatccggagattcccaaataggtcaacct 101 || |||| ||||||||||||||| |||||| |||||| Sbjct: 121497 aagcaagctctgatccggagattcccgaatagggcaacct 121536
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 186 bits (94), Expect = 5e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 453 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 454 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 513 Query: 473 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 528 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 514 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 566 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 134 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 193 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 160 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 219 Query: 194 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 234 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 220 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 260 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgact 576 |||||||||||||||||||||||||||||||||||| Sbjct: 576 ctgaccgcgtgcctgttgaagaatgagccggcgact 611 Score = 60.0 bits (30), Expect = 9e-06 Identities = 83/100 (83%), Gaps = 1/100 (1%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||| |||||||||||||| |||||||| || ||||||| || Sbjct: 29 cctaggcacccagag-acgaagaagggcgtagcaaccgacgaaaccctccggggagctgg 87 Query: 62 aaataagcatagatccggagattcccaaataggtcaacct 101 || |||| ||||||||||||||| |||||| |||||| Sbjct: 88 aagcaagctctgatccggagattcccgaatagggcaacct 127
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 184 bits (93), Expect = 2e-43 Identities = 139/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||||| Sbjct: 446 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaaggc 505 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacc 471 |||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| || Sbjct: 506 taaatactcctgagtgaccgatagcgaactagtaccgtgagggaaaggtgaaaaagatcc 565 Query: 472 cccagtgggtagtgaaatagaacgtgaaaccgt 504 ||| ||| ||||||||||||| ||||||||| Sbjct: 566 cccgtagggaagtgaaatagaacatgaaaccgt 598 Score = 131 bits (66), Expect = 3e-27 Identities = 182/218 (83%), Gaps = 2/218 (0%) Strand = Plus / Plus Query: 18 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 77 |||| ||||||||| | || |||||||| ||||||||||| || | | ||| | ||||| Sbjct: 33 acgatgaagggcgtggtaaccgacgaaacgcttcggggagctggatacgagctttgatcc 92 Query: 78 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagc-aggcaaga 136 | |||||||| |||||| |||||| || ||| | | ||||| ||| ||| | | |||| Sbjct: 93 gaagattcccgaatagggcaacctcttggactccttagtgaattcat-agctaagaaaga 151 Query: 137 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 196 || |||| || ||| ||||||||||||||| || ||||||||||||||||| |||||||| Sbjct: 152 gataacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcgattcc 211 Query: 197 cgtagtagcggcgagcgaaatgggagcagcctaaaccg 234 | ||||||||||||||||||||||| |||||||||||| Sbjct: 212 cttagtagcggcgagcgaaatgggaacagcctaaaccg 249 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgact 576 |||||||||||||||||||||||||||||||||||| Sbjct: 629 ctgaccgcgtgcctgttgaagaatgagccggcgact 664
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 182 bits (92), Expect = 9e-43 Identities = 137/152 (90%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||| | Sbjct: 371 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaagac 430 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 |||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 473 ccagtgggtagtgaaatagaacgtgaaaccgt 504 ||| ||| ||||||||||| | ||||||||| Sbjct: 491 ccataggggagtgaaatagatcatgaaaccgt 522 Score = 159 bits (80), Expect = 1e-35 Identities = 179/212 (84%) Strand = Plus / Plus Query: 23 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 82 ||||||||||| | |||||| | ||||||||||| || || |||| | |||||| ||| Sbjct: 38 gaagggcgtagttaccgacgatacgcttcggggagctggaatcaagctttgatccgaaga 97 Query: 83 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 142 ||||| |||||| ||||||| || ||| |||| ||||| ||| |||| |||||||||| Sbjct: 98 ttcccgaatagggcaaccttatatacttcctgttgaattcatagacaggtaagagacaac 157 Query: 143 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 202 | |||||| |||||||||||||||||| | ||||||||||||||| ||||||||| |||| Sbjct: 158 ccggcgaattgaaacatcttagtagccggtggaaaagaaagcaaacgcgattcccttagt 217 Query: 203 agcggcgagcgaaatgggagcagcctaaaccg 234 || ||||||||||| |||| ||| |||||||| Sbjct: 218 agtggcgagcgaaaagggatcagtctaaaccg 249 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 540 tctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 556 tctgaccgcgtgcctgttgaagaatgagccggcgacttatag 597
>gb|L42984.1|ANKCPRGOL Ankistrodesmus stipitatus chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-AstI gene Length = 4859 Score = 180 bits (91), Expect = 3e-42 Identities = 202/233 (86%), Gaps = 12/233 (5%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 |||||||||||||||||||||||||||||||||||||| || |||||||||| | ||||| Sbjct: 383 cccgagtagcatggggcacgtggaatcccgtgtgaatctgcgaggaccacctcgtaaggc 442 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 471 ||||||||| | |||||||||||||||| |||||| |||| |||||| ||||| |||||| Sbjct: 443 taaatactcttaggtgaccgatagcgaaatagtacagtgatggaaagttgaaagagaacc 502 Query: 472 ccc-agtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagg 528 ||| ||| ||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 503 cccttaaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggagg 557 Query: 529 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 | ||| || |||||||||||||||||||||||||||||||||||| |||| Sbjct: 558 gtttagt--tc-ctgaccgcgtgcctgttgaagaatgagccggcgacttatag 607 Score = 113 bits (57), Expect = 7e-22 Identities = 160/193 (82%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 41 cgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacc 100 ||||| ||||||||||| || || |||||| |||||| |||| ||| |||||| ||||| Sbjct: 49 cgaaacgcttcggggagctggcaacaagcatcgatccgaagatccccgaatagggcaacc 108 Query: 101 tttta-aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 159 | ||| ||||||| |||||| ||| | || |||| |||| ||||| |||||||| Sbjct: 109 tcttagaactgcccactgaattcataggtgggtcagaggcaactcagcgaattgaaacat 168 Query: 160 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 219 ||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 169 cttagtagctgaaggaaaagaaagcaaaagcgattcccaaagtagcggcgagcggaatgg 228 Query: 220 gagcagcctaaac 232 || |||||||||| Sbjct: 229 gaacagcctaaac 241
>gb|AF482503.1| Chlorokybus atmophyticus 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast genes for chloroplast products Length = 906 Score = 178 bits (90), Expect = 1e-41 Identities = 155/176 (88%), Gaps = 1/176 (0%) Strand = Plus / Plus Query: 2 cctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 61 ||||||||||||| |||| |||||||||| || |||||||| ||||||||||| ||| Sbjct: 732 cctaggcacccagag-acgaagaagggcgtactaaccgacgaaacgcttcggggagctga 790 Query: 62 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 121 ||| |||||| ||||||||||||||| |||||| |||||| || |||| |||||||||| Sbjct: 791 aaagaagcattgatccggagattcccgaatagggcaacctcttgaacttcctgctgaatt 850 Query: 122 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 177 ||| ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 851 cataggcaggatagagacaacctggcgaactgaaacatcttagtagccagaggaaa 906
>gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4181 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 473 ccagtgggtagtgaaatagaacgtgaaacc 502 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 93.7 bits (47), Expect = 6e-16 Identities = 152/187 (81%) Strand = Plus / Plus Query: 47 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 106 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| | || Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacctataaa 132 Query: 107 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 166 ||| ||| ||| ||| ||| ||||| ||||| | |||||||||||||| |||| Sbjct: 133 actacctatataattcatagttaggaaagaggcaacccagtgaactgaaacatctaagta 192 Query: 167 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 226 || ||||||||||||||||| |||||||||||||||| ||||| |||| |||| ||| Sbjct: 193 gctggaggaaaagaaagcaaacgcgattcccgtagtagtggcgaacgaaccgggattagc 252 Query: 227 ctaaacc 233 ||||||| Sbjct: 253 ctaaacc 259 Score = 73.8 bits (37), Expect = 6e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||| |||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgacttatag 622
>gb|DQ313084.1| Uncultured bacterium clone 3R3F 23S ribosomal RNA gene, partial sequence Length = 629 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 ||||||||||||||| |||| | |||||||||||||||||| |||||||||| | ||||| Sbjct: 243 cccgagtagcatgggacacgagaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 302 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 ||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 303 taaatactcttaggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 362 Query: 473 ccagtgggtagtgaaatagaacgtgaaacc 502 | ||| ||||||||||||| ||||||| Sbjct: 363 ctgtaggggagtgaaatagaacatgaaacc 392 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 148 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 207 ||||||||||||||||||||| ||||| |||||||||| |||||||||| ||||| || Sbjct: 8 gaactgaaacatcttagtagctgaaggaagagaaagcaaacgcgattcccggagtagtgg 67 Query: 208 cgagcgaaatgggagcagcctaaacc 233 |||||||||||||| ||||||||||| Sbjct: 68 cgagcgaaatgggaacagcctaaacc 93 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgact 576 |||||||||| |||||||||||||| |||||||||| Sbjct: 426 ctgaccgcgtacctgttgaagaatgggccggcgact 461
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 178 bits (90), Expect = 1e-41 Identities = 198/230 (86%), Gaps = 8/230 (3%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 567 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 626 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 |||||||||||||||||||||||| | | ||||||| ||||||| ||||| |||||||| Sbjct: 627 taaatactcctgggtgaccgatagtgcaa-agtaccgcgagggaatggtgataagaaccc 685 Query: 473 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 532 | ||| ||||||||||||| |||||||| | |||| ||||||||||||| | Sbjct: 686 ctgtaggggagtgaaatagaacatgaaaccg---taagctgacaagcagtgggagc---a 739 Query: 533 agtgatctc-tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||| | || ||||||||||||||||||||||||||||||||||| |||| Sbjct: 740 agttaacttgtgaccgcgtgcctgttgaagaatgagccggcgacttatag 789 Score = 119 bits (60), Expect = 1e-23 Identities = 90/100 (90%) Strand = Plus / Plus Query: 134 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 193 |||||||||| | ||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 140 agagacaacccagtgaattgaaacatcttagtagctggaggaaaagaaagcaaacgcgat 199 Query: 194 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 233 |||||||||||||||||||||| |||| ||||||||||| Sbjct: 200 tcccgtagtagcggcgagcgaaccgggatcagcctaaacc 239
>emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL gene, exon 1 Length = 1965 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 473 ccagtgggtagtgaaatagaacgtgaaacc 502 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 93.7 bits (47), Expect = 6e-16 Identities = 152/187 (81%) Strand = Plus / Plus Query: 47 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 106 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| | || Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacctataaa 132 Query: 107 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 166 ||| ||| ||| ||| ||| ||||| ||||| | |||||||||||||| |||| Sbjct: 133 actacctatataattcatagttaggaaagaggcaacccagtgaactgaaacatctaagta 192 Query: 167 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 226 || ||||||||||||||||| |||||||||||||||| ||||| |||| |||| ||| Sbjct: 193 gctggaggaaaagaaagcaaacgcgattcccgtagtagtggcgaacgaaccgggattagc 252 Query: 227 ctaaacc 233 ||||||| Sbjct: 253 ctaaacc 259 Score = 73.8 bits (37), Expect = 6e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||||||||||||||||||||||||||||||||| |||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgacttatag 622
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 176 bits (89), Expect = 5e-41 Identities = 134/149 (89%) Strand = Plus / Plus Query: 356 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 415 ||||||||||||||| ||| |||||| ||||||||||| || |||| || | |||||||| Sbjct: 1 gagtagcatggggcaggtgaaatcccatgtgaatcagcgagaaccatctcgtaaggctaa 60 Query: 416 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 475 ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 61 atactcctgtgtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaaccccga 120 Query: 476 gtgggtagtgaaatagaacgtgaaaccgt 504 ||| ||||||||||||| ||||||||| Sbjct: 121 aaggggagtgaaatagaacatgaaaccgt 149 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 540 tctgaccgcgtgcctgttgaagaatgagccggcga 574 |||||||| |||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcga 216
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 176 bits (89), Expect = 5e-41 Identities = 138/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 527 cccgagtagcatggggcacgtgaaatcccgtgtgaatccacgaggaccacctcgtaaggc 586 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 |||||||||||||||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 587 taaatactcctgggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 646 Query: 473 ccagt-gggtagtgaaatagaacgtgaaaccgt 504 ||||| ||| ||||||||||||| ||||||||| Sbjct: 647 ccagtcggggagtgaaatagaacatgaaaccgt 679 Score = 147 bits (74), Expect = 5e-32 Identities = 95/102 (93%) Strand = Plus / Plus Query: 133 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 192 ||||||||||| || ||| |||||||||||||||||| ||||||||||||||||| |||| Sbjct: 148 aagagacaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcga 207 Query: 193 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 234 ||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 208 ttcccgtagtagcggcgagcgaactgggaacagcctaaaccg 249 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgact 576 ||||||| ||||||||||||||||||||||||||| Sbjct: 714 tgaccgcatgcctgttgaagaatgagccggcgact 748
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 473 ccagtgggtagtgaaatagaacgtgaaaccgtg 505 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 146 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 205 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 206 ggcgagcgaaatgggagcagcctaaacc 233 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||| |||||||||||||||||||||||||||| |||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatag 444
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 473 ccagtgggtagtgaaatagaacgtgaaaccgtg 505 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 146 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 205 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 206 ggcgagcgaaatgggagcagcctaaacc 233 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||| |||||||||||||||||||||||||||| |||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatag 444
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 473 ccagtgggtagtgaaatagaacgtgaaaccgtg 505 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 149 aactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggc 208 |||||||||||||||||||| ||||||| ||||| |||| ||| |||| ||||||||| Sbjct: 22 aactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagcggc 81 Query: 209 gagcgaaatgggagcagcctaaacc 233 ||||||| |||| |||||||||| Sbjct: 82 gagcgaacggggaagagcctaaacc 106 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||| |||||||||||||||||||||||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttatag 457
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 473 ccagtgggtagtgaaatagaacgtgaaaccgtg 505 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 146 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 205 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 206 ggcgagcgaaatgggagcagcctaaacc 233 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||| |||||||||||||||||||||||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttatag 457
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 473 ccagtgggtagtgaaatagaacgtgaaaccgtg 505 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 146 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 205 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 206 ggcgagcgaaatgggagcagcctaaacc 233 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||| |||||||||||||||||||||||||||| |||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatag 444
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 473 ccagtgggtagtgaaatagaacgtgaaaccgtg 505 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 146 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 205 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 206 ggcgagcgaaatgggagcagcctaaacc 233 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||| |||||||||||||||||||||||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttatag 457
>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 473 ccagtgggtagtgaaatagaacgtgaaaccgtg 505 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 146 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 205 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 206 ggcgagcgaaatgggagcagcctaaacc 233 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||| |||||||||||||||||||||||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttatag 457
>gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 353 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 412 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 472 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 473 ccagtgggtagtgaaatagaacgtgaaaccgtg 505 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 146 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 205 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 206 ggcgagcgaaatgggagcagcctaaacc 233 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 542 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 |||||| |||||||||||||||||||||||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttatag 457
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 176 bits (89), Expect = 5e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 352 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 411 ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||| Sbjct: 365 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 424 Query: 412 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 471 |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 425 ctaaatactcctggatgaccgatagcgaactagtaccgtgagggaagggtgaaaagaacc 484 Query: 472 c 472 | Sbjct: 485 c 485 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 139 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 198 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 150 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 209 Query: 199 tagtagcggcgagcgaaatgggagcagcctaaaccg 234 |||||||||||||||| |||| |||||||||||| Sbjct: 210 cagtagcggcgagcgaagagggaacagcctaaaccg 245 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 541 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 551 ctgaccgcgtgcctgttgaagaatgagccggcgactcatag 591 Score = 44.1 bits (22), Expect = 0.51 Identities = 43/50 (86%) Strand = Plus / Plus Query: 275 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 324 ||||| |||||||||||||| ||||||| |||||| | |||||||||| Sbjct: 287 gctagacgaagcggttgagttccgcaccgcagatggtgagagtccagtag 336 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,979,677 Number of Sequences: 3902068 Number of extensions: 3979677 Number of successful extensions: 119276 Number of sequences better than 10.0: 26617 Number of HSP's better than 10.0 without gapping: 26445 Number of HSP's successfully gapped in prelim test: 207 Number of HSP's that attempted gapping in prelim test: 75129 Number of HSP's gapped (non-prelim): 42192 length of query: 581 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 558 effective length of database: 17,143,297,704 effective search space: 9565960118832 effective search space used: 9565960118832 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
