ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd27b01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY108311.1| Zea mays PCO113729 mRNA sequence Length = 1202 Score = 135 bits (68), Expect = 5e-29 Identities = 97/107 (90%) Strand = Plus / Plus Query: 68 ctgtacgtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacctgaggacg 127 |||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||| Sbjct: 433 ctgtacgtgaaggtgagcatggacggggcgccatacctccggaaggtggacctgcggacc 492 Query: 128 tacggcggntaccgggagctgcgcgcggcgctggacgcgctcttcgg 174 |||||||| ||||| |||||| | | |||||||||||||||||||| Sbjct: 493 tacggcggctaccgtgagctgagggacgcgctggacgcgctcttcgg 539
>ref|NM_185060.1| Oryza sativa (japonica cultivar-group), mRNA Length = 588 Score = 89.7 bits (45), Expect = 3e-15 Identities = 71/80 (88%) Strand = Plus / Plus Query: 68 ctgtacgtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacctgaggacg 127 |||||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||| | Sbjct: 325 ctgtacgtgaaggtgagcatggacggggcgccatacctccgcaaggtcgacctccggatg 384 Query: 128 tacggcggntaccgggagct 147 |||||||| ||| ||||||| Sbjct: 385 tacggcggctacagggagct 404
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 89.7 bits (45), Expect = 3e-15 Identities = 71/80 (88%) Strand = Plus / Minus Query: 68 ctgtacgtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacctgaggacg 127 |||||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||| | Sbjct: 32942919 ctgtacgtgaaggtgagcatggacggggcgccatacctccgcaaggtcgacctccggatg 32942860 Query: 128 tacggcggntaccgggagct 147 |||||||| ||| ||||||| Sbjct: 32942859 tacggcggctacagggagct 32942840 Score = 75.8 bits (38), Expect = 4e-11 Identities = 76/89 (85%) Strand = Plus / Plus Query: 74 gtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacctgaggacgtacggc 133 |||||||||||||||||||||||||||||||| ||||| | |||||||||| |||| Sbjct: 24100618 gtgaaggtgagcatggacggggcgccgtacctgaggaagatcgacctgaggatgtacaag 24100677 Query: 134 ggntaccgggagctgcgcgcggcgctgga 162 || ||| ||||||| |||| ||| ||||| Sbjct: 24100678 ggctacagggagctccgcgaggccctgga 24100706 Score = 60.0 bits (30), Expect = 2e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 73 cgtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacctga 122 ||||||||| |||||||||||||| || ||||| || ||||||||||||| Sbjct: 30189187 cgtgaaggtcagcatggacggggcaccctacctgcgcaaggtggacctga 30189138 Score = 56.0 bits (28), Expect = 4e-05 Identities = 31/32 (96%) Strand = Plus / Minus Query: 74 gtgaaggtgagcatggacggggcgccgtacct 105 |||||||||||||||||||| ||||||||||| Sbjct: 24086323 gtgaaggtgagcatggacggcgcgccgtacct 24086292 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 147 tgcgcgcggcgctggacgcgctc 169 ||||||||| ||||||||||||| Sbjct: 34860956 tgcgcgcggagctggacgcgctc 34860978 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 147 tgcgcgcggcgctggacgcgctc 169 ||||||||| ||||||||||||| Sbjct: 34856741 tgcgcgcggagctggacgcgctc 34856763
>gb|AC093713.6| Oryza sativa chromosome 3 BAC OSJNBa0094F01 genomic sequence, complete sequence Length = 151479 Score = 89.7 bits (45), Expect = 3e-15 Identities = 71/80 (88%) Strand = Plus / Plus Query: 68 ctgtacgtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacctgaggacg 127 |||||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||| | Sbjct: 47256 ctgtacgtgaaggtgagcatggacggggcgccatacctccgcaaggtcgacctccggatg 47315 Query: 128 tacggcggntaccgggagct 147 |||||||| ||| ||||||| Sbjct: 47316 tacggcggctacagggagct 47335
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 89.7 bits (45), Expect = 3e-15 Identities = 71/80 (88%) Strand = Plus / Minus Query: 68 ctgtacgtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacctgaggacg 127 |||||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||| | Sbjct: 33033429 ctgtacgtgaaggtgagcatggacggggcgccatacctccgcaaggtcgacctccggatg 33033370 Query: 128 tacggcggntaccgggagct 147 |||||||| ||| ||||||| Sbjct: 33033369 tacggcggctacagggagct 33033350 Score = 75.8 bits (38), Expect = 4e-11 Identities = 76/89 (85%) Strand = Plus / Plus Query: 74 gtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacctgaggacgtacggc 133 |||||||||||||||||||||||||||||||| ||||| | |||||||||| |||| Sbjct: 24016905 gtgaaggtgagcatggacggggcgccgtacctgaggaagatcgacctgaggatgtacaag 24016964 Query: 134 ggntaccgggagctgcgcgcggcgctgga 162 || ||| ||||||| |||| ||| ||||| Sbjct: 24016965 ggctacagggagctccgcgaggccctgga 24016993 Score = 60.0 bits (30), Expect = 2e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 73 cgtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacctga 122 ||||||||| |||||||||||||| || ||||| || ||||||||||||| Sbjct: 30280609 cgtgaaggtcagcatggacggggcaccctacctgcgcaaggtggacctga 30280560 Score = 56.0 bits (28), Expect = 4e-05 Identities = 31/32 (96%) Strand = Plus / Minus Query: 74 gtgaaggtgagcatggacggggcgccgtacct 105 |||||||||||||||||||| ||||||||||| Sbjct: 24003792 gtgaaggtgagcatggacggcgcgccgtacct 24003761 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 147 tgcgcgcggcgctggacgcgctc 169 ||||||||| ||||||||||||| Sbjct: 34951028 tgcgcgcggagctggacgcgctc 34951050 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 147 tgcgcgcggcgctggacgcgctc 169 ||||||||| ||||||||||||| Sbjct: 34946813 tgcgcgcggagctggacgcgctc 34946835
>dbj|AK059619.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-G11, full insert sequence Length = 1128 Score = 89.7 bits (45), Expect = 3e-15 Identities = 71/80 (88%) Strand = Plus / Plus Query: 68 ctgtacgtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacctgaggacg 127 |||||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||| | Sbjct: 390 ctgtacgtgaaggtgagcatggacggggcgccatacctccgcaaggtcgacctccggatg 449 Query: 128 tacggcggntaccgggagct 147 |||||||| ||| ||||||| Sbjct: 450 tacggcggctacagggagct 469
>ref|XM_468971.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1095 Score = 75.8 bits (38), Expect = 4e-11 Identities = 76/89 (85%) Strand = Plus / Plus Query: 74 gtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacctgaggacgtacggc 133 |||||||||||||||||||||||||||||||| ||||| | |||||||||| |||| Sbjct: 520 gtgaaggtgagcatggacggggcgccgtacctgaggaagatcgacctgaggatgtacaag 579 Query: 134 ggntaccgggagctgcgcgcggcgctgga 162 || ||| ||||||| |||| ||| ||||| Sbjct: 580 ggctacagggagctccgcgaggccctgga 608
>gb|AC145379.2| Oryza sativa chromosome 3 BAC OSJNBa0010N03 genomic sequence, complete sequence Length = 140980 Score = 75.8 bits (38), Expect = 4e-11 Identities = 76/89 (85%) Strand = Plus / Minus Query: 74 gtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacctgaggacgtacggc 133 |||||||||||||||||||||||||||||||| ||||| | |||||||||| |||| Sbjct: 123214 gtgaaggtgagcatggacggggcgccgtacctgaggaagatcgacctgaggatgtacaag 123155 Query: 134 ggntaccgggagctgcgcgcggcgctgga 162 || ||| ||||||| |||| ||| ||||| Sbjct: 123154 ggctacagggagctccgcgaggccctgga 123126 Score = 56.0 bits (28), Expect = 4e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 74 gtgaaggtgagcatggacggggcgccgtacct 105 |||||||||||||||||||| ||||||||||| Sbjct: 136233 gtgaaggtgagcatggacggcgcgccgtacct 136264
>dbj|AK073044.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033001E11, full insert sequence Length = 1097 Score = 75.8 bits (38), Expect = 4e-11 Identities = 76/89 (85%) Strand = Plus / Plus Query: 74 gtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacctgaggacgtacggc 133 |||||||||||||||||||||||||||||||| ||||| | |||||||||| |||| Sbjct: 522 gtgaaggtgagcatggacggggcgccgtacctgaggaagatcgacctgaggatgtacaag 581 Query: 134 ggntaccgggagctgcgcgcggcgctgga 162 || ||| ||||||| |||| ||| ||||| Sbjct: 582 ggctacagggagctccgcgaggccctgga 610
>gb|DQ442404.1| Striga asiatica clone StIAA-2 auxin-regulated protein mRNA, complete cds Length = 1126 Score = 73.8 bits (37), Expect = 2e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 74 gtgaaggtgagcatggacggggcgccgtaccttcggaaggt 114 |||||||||||||||||||||||||||||||| |||||||| Sbjct: 397 gtgaaggtgagcatggacggggcgccgtacctgcggaaggt 437
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 67.9 bits (34), Expect = 1e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 73 cgtgaaggtgagcatggacggggcgccgtaccttcggaaggtggac 118 |||||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 20341451 cgtgaaggtgagcatggacgggacgccgtacctgaggaaggtggac 20341406
>dbj|AP005681.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1439_F07 Length = 153743 Score = 67.9 bits (34), Expect = 1e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 73 cgtgaaggtgagcatggacggggcgccgtaccttcggaaggtggac 118 |||||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 120578 cgtgaaggtgagcatggacgggacgccgtacctgaggaaggtggac 120533
>dbj|AK111128.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-C09, full insert sequence Length = 956 Score = 67.9 bits (34), Expect = 1e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 73 cgtgaaggtgagcatggacggggcgccgtaccttcggaaggtggac 118 |||||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 203 cgtgaaggtgagcatggacgggacgccgtacctgaggaaggtggac 248
>gb|AY107725.1| Zea mays PCO106440 mRNA sequence Length = 1176 Score = 65.9 bits (33), Expect = 4e-08 Identities = 59/68 (86%) Strand = Plus / Plus Query: 80 gtgagcatggacggggcgccgtaccttcggaaggtggacctgaggacgtacggcggntac 139 |||||||||||||| || |||||||| |||||||||||||||||| |||| | || ||| Sbjct: 539 gtgagcatggacggcgccccgtacctgaggaaggtggacctgaggatgtacaggggctac 598 Query: 140 cgggagct 147 ||||||| Sbjct: 599 agggagct 606
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 63.9 bits (32), Expect = 1e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 73 cgtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacct 120 ||||||||||||||||||||| ||||| ||||| || ||||||||||| Sbjct: 25346753 cgtgaaggtgagcatggacggcgcgccatacctgcgcaaggtggacct 25346706 Score = 44.1 bits (22), Expect = 0.14 Identities = 25/26 (96%) Strand = Plus / Plus Query: 68 ctgtacgtgaaggtgagcatggacgg 93 |||| ||||||||||||||||||||| Sbjct: 25359675 ctgttcgtgaaggtgagcatggacgg 25359700
>dbj|AK068213.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149K13, full insert sequence Length = 1545 Score = 63.9 bits (32), Expect = 1e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 73 cgtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacct 120 ||||||||||||||||||||| ||||| ||||| || ||||||||||| Sbjct: 738 cgtgaaggtgagcatggacggcgcgccatacctgcgcaaggtggacct 785
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 63.9 bits (32), Expect = 1e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 73 cgtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacct 120 ||||||||||||||||||||| ||||| ||||| || ||||||||||| Sbjct: 25274929 cgtgaaggtgagcatggacggcgcgccatacctgcgcaaggtggacct 25274882 Score = 44.1 bits (22), Expect = 0.14 Identities = 25/26 (96%) Strand = Plus / Plus Query: 68 ctgtacgtgaaggtgagcatggacgg 93 |||| ||||||||||||||||||||| Sbjct: 25287851 ctgttcgtgaaggtgagcatggacgg 25287876
>emb|AL837528.5|CNS08CAR Oryza sativa chromosome 12, . BAC OSJNBb0062H20 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152914 Score = 63.9 bits (32), Expect = 1e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 73 cgtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacct 120 ||||||||||||||||||||| ||||| ||||| || ||||||||||| Sbjct: 13563 cgtgaaggtgagcatggacggcgcgccatacctgcgcaaggtggacct 13516 Score = 44.1 bits (22), Expect = 0.14 Identities = 25/26 (96%) Strand = Plus / Plus Query: 68 ctgtacgtgaaggtgagcatggacgg 93 |||| ||||||||||||||||||||| Sbjct: 26485 ctgttcgtgaaggtgagcatggacgg 26510
>ref|XM_469684.1| Oryza sativa (japonica cultivar-group), mRNA Length = 811 Score = 60.0 bits (30), Expect = 2e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 73 cgtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacctga 122 ||||||||| |||||||||||||| || ||||| || ||||||||||||| Sbjct: 499 cgtgaaggtcagcatggacggggcaccctacctgcgcaaggtggacctga 548
>ref|XM_469685.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1379 Score = 60.0 bits (30), Expect = 2e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 73 cgtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacctga 122 ||||||||| |||||||||||||| || ||||| || ||||||||||||| Sbjct: 554 cgtgaaggtcagcatggacggggcaccctacctgcgcaaggtggacctga 603
>gb|BT017977.1| Zea mays clone EL01N0525A01.c mRNA sequence Length = 885 Score = 60.0 bits (30), Expect = 2e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 69 tgtacgtgaaggtgagcatggacggggcgccgtaccttcggaaggtggac 118 |||||||||||||||||||||| || ||||| ||||| ||||||||||| Sbjct: 285 tgtacgtgaaggtgagcatggatggcgcgccctacctcaggaaggtggac 334
>gb|AC096855.5| Oryza sativa chromosome 3 BAC OJ1365_D05 genomic sequence, complete sequence Length = 163972 Score = 60.0 bits (30), Expect = 2e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 73 cgtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacctga 122 ||||||||| |||||||||||||| || ||||| || ||||||||||||| Sbjct: 34708 cgtgaaggtcagcatggacggggcaccctacctgcgcaaggtggacctga 34757
>emb|AJ563599.2|OSA563599 Oryza sativa (indica cultivar-group) iaa1 gene for Aux/IAA protein, exons 1-5 Length = 4539 Score = 60.0 bits (30), Expect = 2e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 73 cgtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacctga 122 ||||||||| |||||||||||||| || ||||| || ||||||||||||| Sbjct: 3633 cgtgaaggtcagcatggacggggcaccctacctgcgcaaggtggacctga 3682
>emb|AJ251791.1|OSA251791 Oryza sativa partial mRNA for putative IAA1 protein (iaa1 gene) Length = 1068 Score = 60.0 bits (30), Expect = 2e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 73 cgtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacctga 122 ||||||||| |||||||||||||| || ||||| || ||||||||||||| Sbjct: 551 cgtgaaggtcagcatggacggggcaccctacctgcgcaaggtggacctga 600
>dbj|AK102769.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107G01, full insert sequence Length = 3241 Score = 60.0 bits (30), Expect = 2e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 73 cgtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacctga 122 ||||||||| |||||||||||||| || ||||| || ||||||||||||| Sbjct: 2764 cgtgaaggtcagcatggacggggcaccctacctgcgcaaggtggacctga 2715
>dbj|AK100790.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121A20, full insert sequence Length = 1092 Score = 60.0 bits (30), Expect = 2e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 73 cgtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacctga 122 ||||||||| |||||||||||||| || ||||| || ||||||||||||| Sbjct: 560 cgtgaaggtcagcatggacggggcaccctacctgcgcaaggtggacctga 609
>dbj|AK059838.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C11, full insert sequence Length = 1180 Score = 60.0 bits (30), Expect = 2e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 73 cgtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacctga 122 ||||||||| |||||||||||||| || ||||| || ||||||||||||| Sbjct: 556 cgtgaaggtcagcatggacggggcaccctacctgcgcaaggtggacctga 605
>gb|AY622358.1| Festuca rubra clone RF-150 EST-SRR marker sequence Length = 177 Score = 58.0 bits (29), Expect = 9e-06 Identities = 44/49 (89%) Strand = Plus / Plus Query: 74 gtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacctga 122 |||||||||||||||||||| ||||| ||||| || |||||||| |||| Sbjct: 90 gtgaaggtgagcatggacggcgcgccctacctgcgcaaggtggatctga 138
>gb|AY622357.1| Lolium perenne clone PR-150 EST-SRR marker sequence Length = 180 Score = 58.0 bits (29), Expect = 9e-06 Identities = 44/49 (89%) Strand = Plus / Plus Query: 74 gtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacctga 122 |||||||||||||||||||| ||||| ||||| || |||||||| |||| Sbjct: 93 gtgaaggtgagcatggacggcgcgccctacctgcgcaaggtggatctga 141
>gb|AY622354.1| Lolium temulentum clone LT-150 EST-SRR marker sequence Length = 176 Score = 58.0 bits (29), Expect = 9e-06 Identities = 44/49 (89%) Strand = Plus / Plus Query: 74 gtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacctga 122 |||||||||||||||||||| ||||| ||||| || |||||||| |||| Sbjct: 89 gtgaaggtgagcatggacggcgcgccctacctgcgcaaggtggatctga 137
>gb|AY622353.1| Lolium multiflorum clone IR-150 EST-SRR marker sequence Length = 180 Score = 58.0 bits (29), Expect = 9e-06 Identities = 44/49 (89%) Strand = Plus / Plus Query: 74 gtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacctga 122 |||||||||||||||||||| ||||| ||||| || |||||||| |||| Sbjct: 93 gtgaaggtgagcatggacggcgcgccctacctgcgcaaggtggatctga 141
>emb|AJ843999.1| Plantago major mRNA for auxin resistance protein (axr2 gene) Length = 1195 Score = 58.0 bits (29), Expect = 9e-06 Identities = 38/41 (92%) Strand = Plus / Plus Query: 74 gtgaaggtgagcatggacggggcgccgtaccttcggaaggt 114 |||||||||||||||||||| || ||||||||||| ||||| Sbjct: 487 gtgaaggtgagcatggacggcgcaccgtaccttcgcaaggt 527
>gb|AY847064.1| Avena sativa Aux/IAA3 mRNA, partial cds Length = 360 Score = 58.0 bits (29), Expect = 9e-06 Identities = 44/49 (89%) Strand = Plus / Plus Query: 74 gtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacctga 122 |||||||||||||||||||| ||||| ||||| || |||||||| |||| Sbjct: 166 gtgaaggtgagcatggacggtgcgccctacctgcgcaaggtggatctga 214
>ref|XM_468970.1| Oryza sativa (japonica cultivar-group), mRNA Length = 707 Score = 56.0 bits (28), Expect = 4e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 74 gtgaaggtgagcatggacggggcgccgtacct 105 |||||||||||||||||||| ||||||||||| Sbjct: 378 gtgaaggtgagcatggacggcgcgccgtacct 409
>gb|AC145780.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0069P02 map near S13580, complete sequence Length = 88044 Score = 56.0 bits (28), Expect = 4e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 74 gtgaaggtgagcatggacggggcgccgtacct 105 |||||||||||||||||||| ||||||||||| Sbjct: 5133 gtgaaggtgagcatggacggcgcgccgtacct 5164
>gb|AY622356.1| Dactylis glomerata clone OG-150 EST-SRR marker sequence Length = 174 Score = 56.0 bits (28), Expect = 4e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 74 gtgaaggtgagcatggacggggcgccgtaccttcggaaggtgga 117 |||||||||||||||||||| ||||| ||||| || |||||||| Sbjct: 87 gtgaaggtgagcatggacggcgcgccctacctgcgcaaggtgga 130
>gb|AY622365.1| Triticum aestivum clone WH-150 EST-SRR marker sequence Length = 174 Score = 52.0 bits (26), Expect = 6e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 77 aaggtgagcatggacggggcgccgtaccttcggaaggtggacctga 122 ||||||||||||||||| ||||| ||||| || |||||||| |||| Sbjct: 90 aaggtgagcatggacggcgcgccctacctgcgcaaggtggatctga 135
>gb|AY622359.1| Oryza sativa clone RI-150 EST-SRR marker sequence Length = 180 Score = 52.0 bits (26), Expect = 6e-04 Identities = 44/50 (88%) Strand = Plus / Plus Query: 73 cgtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacctga 122 ||||||||| ||||||||||| || || ||||| || ||||||||||||| Sbjct: 92 cgtgaaggtcagcatggacggcgcaccctacctgcgcaaggtggacctga 141
>gb|AY622364.1| Thinopyrum ponticum clone TW-150 EST-SRR marker sequence Length = 174 Score = 50.1 bits (25), Expect = 0.002 Identities = 37/41 (90%) Strand = Plus / Plus Query: 77 aaggtgagcatggacggggcgccgtaccttcggaaggtgga 117 ||||||||||||||||| ||||| ||||| || |||||||| Sbjct: 90 aaggtgagcatggacggcgcgccctacctgcgcaaggtgga 130
>gb|AY622362.1| Schedonorus arundinaceus clone TFS-150 EST-SRR marker sequence Length = 186 Score = 50.1 bits (25), Expect = 0.002 Identities = 43/49 (87%) Strand = Plus / Plus Query: 74 gtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacctga 122 |||||||||||||||||||| || || ||||| || |||||||| |||| Sbjct: 99 gtgaaggtgagcatggacggtgcaccctacctgcgcaaggtggatctga 147
>gb|AY622361.1| Bromus inermis clone SB-150 EST-SRR marker sequence Length = 171 Score = 50.1 bits (25), Expect = 0.002 Identities = 37/41 (90%) Strand = Plus / Plus Query: 77 aaggtgagcatggacggggcgccgtaccttcggaaggtgga 117 ||||||||||||||||| ||||| ||||| || |||||||| Sbjct: 87 aaggtgagcatggacggcgcgccctacctgcgcaaggtgga 127
>gb|AY622360.1| Psathyrostachys juncea clone RW-150 EST-SRR marker sequence Length = 174 Score = 50.1 bits (25), Expect = 0.002 Identities = 37/41 (90%) Strand = Plus / Plus Query: 77 aaggtgagcatggacggggcgccgtaccttcggaaggtgga 117 ||||||||||||||||| ||||| ||||| || |||||||| Sbjct: 90 aaggtgagcatggacggcgcgccctacctgcgcaaggtgga 130
>gb|AY622355.1| Schedonorus pratensis clone MF-150 EST-SRR marker sequence Length = 180 Score = 50.1 bits (25), Expect = 0.002 Identities = 43/49 (87%) Strand = Plus / Plus Query: 74 gtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacctga 122 |||||||||||||||||||| || || ||||| || |||||||| |||| Sbjct: 93 gtgaaggtgagcatggacggcgcaccctacctgcgcaaggtggatctga 141
>emb|AJ575098.1|TAE575098 Triticum aestivum partial mRNA for IAA1 protein Length = 1104 Score = 50.1 bits (25), Expect = 0.002 Identities = 37/41 (90%) Strand = Plus / Plus Query: 77 aaggtgagcatggacggggcgccgtaccttcggaaggtgga 117 ||||||||||||||||| ||||| ||||| || |||||||| Sbjct: 461 aaggtgagcatggacggcgcgccctacctgcgcaaggtgga 501
>ref|XM_550382.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1054 Score = 48.1 bits (24), Expect = 0.009 Identities = 42/48 (87%) Strand = Plus / Plus Query: 73 cgtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacct 120 |||||||||| | ||||||| ||||||||||| || ||||||||||| Sbjct: 406 cgtgaaggtggccgtggacggcgcgccgtacctgcgcaaggtggacct 453
>gb|AY781902.1| Saccharum hybrid cultivar isolate c57 auxin-induced protein mRNA, partial cds Length = 1046 Score = 48.1 bits (24), Expect = 0.009 Identities = 42/48 (87%) Strand = Plus / Plus Query: 73 cgtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacct 120 ||||||||||||| | ||||| ||||| ||||| || ||||||||||| Sbjct: 215 cgtgaaggtgagcttagacggcgcgccatacctgcgcaaggtggacct 262
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 48.1 bits (24), Expect = 0.009 Identities = 42/48 (87%) Strand = Plus / Minus Query: 73 cgtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacct 120 |||||||||| | ||||||| ||||||||||| || ||||||||||| Sbjct: 4074937 cgtgaaggtggccgtggacggcgcgccgtacctgcgcaaggtggacct 4074890 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Minus Query: 148 gcgcgcggcgctggacgcgct 168 ||||||||||||||||||||| Sbjct: 21111354 gcgcgcggcgctggacgcgct 21111334
>dbj|AP002903.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0509B06 Length = 104515 Score = 48.1 bits (24), Expect = 0.009 Identities = 42/48 (87%) Strand = Plus / Minus Query: 73 cgtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacct 120 |||||||||| | ||||||| ||||||||||| || ||||||||||| Sbjct: 41680 cgtgaaggtggccgtggacggcgcgccgtacctgcgcaaggtggacct 41633
>dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0406H10 Length = 156419 Score = 48.1 bits (24), Expect = 0.009 Identities = 42/48 (87%) Strand = Plus / Minus Query: 73 cgtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacct 120 |||||||||| | ||||||| ||||||||||| || ||||||||||| Sbjct: 21908 cgtgaaggtggccgtggacggcgcgccgtacctgcgcaaggtggacct 21861
>dbj|AK109373.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-G03, full insert sequence Length = 1118 Score = 48.1 bits (24), Expect = 0.009 Identities = 42/48 (87%) Strand = Plus / Plus Query: 73 cgtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacct 120 |||||||||| | ||||||| ||||||||||| || ||||||||||| Sbjct: 406 cgtgaaggtggccgtggacggcgcgccgtacctgcgcaaggtggacct 453
>dbj|AK100800.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121G17, full insert sequence Length = 1078 Score = 48.1 bits (24), Expect = 0.009 Identities = 42/48 (87%) Strand = Plus / Plus Query: 73 cgtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacct 120 |||||||||| | ||||||| ||||||||||| || ||||||||||| Sbjct: 408 cgtgaaggtggccgtggacggcgcgccgtacctgcgcaaggtggacct 455
>dbj|AK069242.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010B20, full insert sequence Length = 1089 Score = 48.1 bits (24), Expect = 0.009 Identities = 42/48 (87%) Strand = Plus / Plus Query: 73 cgtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacct 120 |||||||||| | ||||||| ||||||||||| || ||||||||||| Sbjct: 398 cgtgaaggtggccgtggacggcgcgccgtacctgcgcaaggtggacct 445
>dbj|AK060091.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-D01, full insert sequence Length = 1054 Score = 48.1 bits (24), Expect = 0.009 Identities = 42/48 (87%) Strand = Plus / Plus Query: 73 cgtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacct 120 |||||||||| | ||||||| ||||||||||| || ||||||||||| Sbjct: 406 cgtgaaggtggccgtggacggcgcgccgtacctgcgcaaggtggacct 453
>gb|AY103836.1| Zea mays PCO135053 mRNA sequence Length = 1519 Score = 48.1 bits (24), Expect = 0.009 Identities = 42/48 (87%) Strand = Plus / Plus Query: 73 cgtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacct 120 ||||||||||||| ||||||| ||||| ||||| || || |||||||| Sbjct: 648 cgtgaaggtgagcttggacggcgcgccctacctgcgcaaagtggacct 695
>ref|XM_476878.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1164 Score = 46.1 bits (23), Expect = 0.035 Identities = 41/47 (87%) Strand = Plus / Plus Query: 68 ctgtacgtgaaggtgagcatggacggggcgccgtaccttcggaaggt 114 ||||| ||||||||||||||||| ||||| || ||||| ||||||| Sbjct: 475 ctgtatgtgaaggtgagcatggatggggcaccatacctgaggaaggt 521
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.035 Identities = 41/47 (87%) Strand = Plus / Minus Query: 68 ctgtacgtgaaggtgagcatggacggggcgccgtaccttcggaaggt 114 ||||| ||||||||||||||||| ||||| || ||||| ||||||| Sbjct: 4388164 ctgtatgtgaaggtgagcatggatggggcaccatacctgaggaaggt 4388118
>dbj|AP003835.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1506_G02 Length = 106742 Score = 46.1 bits (23), Expect = 0.035 Identities = 41/47 (87%) Strand = Plus / Minus Query: 68 ctgtacgtgaaggtgagcatggacggggcgccgtaccttcggaaggt 114 ||||| ||||||||||||||||| ||||| || ||||| ||||||| Sbjct: 28013 ctgtatgtgaaggtgagcatggatggggcaccatacctgaggaaggt 27967
>dbj|AK103483.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033130J12, full insert sequence Length = 1164 Score = 46.1 bits (23), Expect = 0.035 Identities = 41/47 (87%) Strand = Plus / Plus Query: 68 ctgtacgtgaaggtgagcatggacggggcgccgtaccttcggaaggt 114 ||||| ||||||||||||||||| ||||| || ||||| ||||||| Sbjct: 475 ctgtatgtgaaggtgagcatggatggggcaccatacctgaggaaggt 521
>ref|NM_111345.2| Arabidopsis thaliana IAA16; transcription factor AT3G04730 (IAA16) mRNA, complete cds Length = 1279 Score = 44.1 bits (22), Expect = 0.14 Identities = 34/38 (89%) Strand = Plus / Plus Query: 74 gtgaaggtgagcatggacggggcgccgtaccttcggaa 111 |||||||| ||||||||||| || |||||||| ||||| Sbjct: 548 gtgaaggttagcatggacggtgcaccgtacctacggaa 585
>gb|AC011437.6|ATAC011437 Arabidopsis thaliana chromosome III BAC F7O18 genomic sequence, complete sequence Length = 95310 Score = 44.1 bits (22), Expect = 0.14 Identities = 34/38 (89%) Strand = Plus / Minus Query: 74 gtgaaggtgagcatggacggggcgccgtaccttcggaa 111 |||||||| ||||||||||| || |||||||| ||||| Sbjct: 67959 gtgaaggttagcatggacggtgcaccgtacctacggaa 67922
>gb|BT000857.1| Arabidopsis thaliana At3g04730/F7O18_22 mRNA, complete cds Length = 711 Score = 44.1 bits (22), Expect = 0.14 Identities = 34/38 (89%) Strand = Plus / Plus Query: 74 gtgaaggtgagcatggacggggcgccgtaccttcggaa 111 |||||||| ||||||||||| || |||||||| ||||| Sbjct: 361 gtgaaggttagcatggacggtgcaccgtacctacggaa 398
>gb|AF375420.1| Arabidopsis thaliana AT3g04730/F7O18_22 mRNA, complete cds Length = 1261 Score = 44.1 bits (22), Expect = 0.14 Identities = 34/38 (89%) Strand = Plus / Plus Query: 74 gtgaaggtgagcatggacggggcgccgtaccttcggaa 111 |||||||| ||||||||||| || |||||||| ||||| Sbjct: 544 gtgaaggttagcatggacggtgcaccgtacctacggaa 581
>gb|AF332400.1| Arabidopsis thaliana clone C00021 (e) auxin-induced protein IAA16 (At3g04730) mRNA, complete cds Length = 711 Score = 44.1 bits (22), Expect = 0.14 Identities = 34/38 (89%) Strand = Plus / Plus Query: 74 gtgaaggtgagcatggacggggcgccgtaccttcggaa 111 |||||||| ||||||||||| || |||||||| ||||| Sbjct: 361 gtgaaggttagcatggacggtgcaccgtacctacggaa 398
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.14 Identities = 31/34 (91%) Strand = Plus / Plus Query: 87 tggacggggcgccgtaccttcggaaggtggacct 120 ||||||| ||||||||||| || ||||||||||| Sbjct: 23118793 tggacggcgcgccgtacctgcgcaaggtggacct 23118826 Score = 40.1 bits (20), Expect = 2.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 77 aaggtgagcatggacggggcgccgtaccttcggaaggtggacct 120 |||||||||||||| || || || ||||| ||||||||||||| Sbjct: 13189534 aaggtgagcatggatggtgctccttacctcaggaaggtggacct 13189577
>emb|BX823949.1|CNS0A6JG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS9ZF01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1096 Score = 44.1 bits (22), Expect = 0.14 Identities = 34/38 (89%) Strand = Plus / Plus Query: 74 gtgaaggtgagcatggacggggcgccgtaccttcggaa 111 |||||||| ||||||||||| || |||||||| ||||| Sbjct: 503 gtgaaggttagcatggacggtgcaccgtacctacggaa 540
>gb|AY087195.1| Arabidopsis thaliana clone 32727 mRNA, complete sequence Length = 1140 Score = 44.1 bits (22), Expect = 0.14 Identities = 34/38 (89%) Strand = Plus / Plus Query: 74 gtgaaggtgagcatggacggggcgccgtaccttcggaa 111 |||||||| ||||||||||| || |||||||| ||||| Sbjct: 548 gtgaaggttagcatggacggtgcaccgtacctacggaa 585
>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417D05 Length = 165752 Score = 44.1 bits (22), Expect = 0.14 Identities = 31/34 (91%) Strand = Plus / Plus Query: 87 tggacggggcgccgtaccttcggaaggtggacct 120 ||||||| ||||||||||| || ||||||||||| Sbjct: 69441 tggacggcgcgccgtacctgcgcaaggtggacct 69474
>dbj|AK073361.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027E22, full insert sequence Length = 1165 Score = 44.1 bits (22), Expect = 0.14 Identities = 25/26 (96%) Strand = Plus / Plus Query: 68 ctgtacgtgaaggtgagcatggacgg 93 |||| ||||||||||||||||||||| Sbjct: 423 ctgttcgtgaaggtgagcatggacgg 448
>dbj|AK069376.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012K19, full insert sequence Length = 1230 Score = 44.1 bits (22), Expect = 0.14 Identities = 31/34 (91%) Strand = Plus / Plus Query: 87 tggacggggcgccgtaccttcggaaggtggacct 120 ||||||| ||||||||||| || ||||||||||| Sbjct: 389 tggacggcgcgccgtacctgcgcaaggtggacct 422
>dbj|AK061037.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-B07, full insert sequence Length = 1241 Score = 44.1 bits (22), Expect = 0.14 Identities = 31/34 (91%) Strand = Plus / Plus Query: 87 tggacggggcgccgtaccttcggaaggtggacct 120 ||||||| ||||||||||| || ||||||||||| Sbjct: 388 tggacggcgcgccgtacctgcgcaaggtggacct 421
>gb|AY103603.1| Zea mays PCO094169 mRNA sequence Length = 1576 Score = 44.1 bits (22), Expect = 0.14 Identities = 34/38 (89%) Strand = Plus / Plus Query: 68 ctgtacgtgaaggtgagcatggacggggcgccgtacct 105 |||||||| ||||| |||||||| || ||||||||||| Sbjct: 421 ctgtacgtcaaggtcagcatggatggcgcgccgtacct 458
>gb|U49072.1|ATU49072 Arabidopsis thaliana early auxin-induced (IAA16) mRNA, complete cds Length = 1169 Score = 44.1 bits (22), Expect = 0.14 Identities = 34/38 (89%) Strand = Plus / Plus Query: 74 gtgaaggtgagcatggacggggcgccgtaccttcggaa 111 |||||||| ||||||||||| || |||||||| ||||| Sbjct: 527 gtgaaggttagcatggacggtgcaccgtacctacggaa 564
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 42.1 bits (21), Expect = 0.54 Identities = 24/25 (96%) Strand = Plus / Plus Query: 146 ctgcgcgcggcgctggacgcgctct 170 ||||||| ||||||||||||||||| Sbjct: 3545968 ctgcgcgaggcgctggacgcgctct 3545992 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 144 agctgcgcgcggcgctgga 162 ||||||||||||||||||| Sbjct: 1642520 agctgcgcgcggcgctgga 1642538 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 144 agctgcgcgcggcgctgga 162 ||||||||||||||||||| Sbjct: 867482 agctgcgcgcggcgctgga 867500
>ref|NM_193483.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 753 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 gcgcgcggcgctggacgcgct 168 ||||||||||||||||||||| Sbjct: 447 gcgcgcggcgctggacgcgct 467
>gb|AY681124.1| Citrus limon auxin-induced protein 22D mRNA, partial cds Length = 408 Score = 42.1 bits (21), Expect = 0.54 Identities = 27/29 (93%) Strand = Plus / Plus Query: 71 tacgtgaaggtgagcatggacggggcgcc 99 |||||||| ||||||||||| |||||||| Sbjct: 343 tacgtgaaagtgagcatggatggggcgcc 371
>gb|AC145477.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1402B06, complete sequence Length = 134001 Score = 42.1 bits (21), Expect = 0.54 Identities = 45/53 (84%) Strand = Plus / Plus Query: 68 ctgtacgtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacct 120 |||||||| ||||| |||||||| || || || ||||| ||||||||||||| Sbjct: 129402 ctgtacgtcaaggtcagcatggatggtgccccctacctcaggaaggtggacct 129454
>gb|AC145396.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0042F15, complete sequence Length = 162959 Score = 42.1 bits (21), Expect = 0.54 Identities = 45/53 (84%) Strand = Plus / Plus Query: 68 ctgtacgtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacct 120 |||||||| ||||| |||||||| || || || ||||| ||||||||||||| Sbjct: 36591 ctgtacgtcaaggtcagcatggatggtgccccctacctcaggaaggtggacct 36643
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 0.54 Identities = 45/53 (84%) Strand = Plus / Plus Query: 68 ctgtacgtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacct 120 |||||||| ||||| |||||||| || || || ||||| ||||||||||||| Sbjct: 7851816 ctgtacgtcaaggtcagcatggatggtgccccctacctcaggaaggtggacct 7851868 Score = 40.1 bits (20), Expect = 2.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 89 gacggggcgccgtaccttcggaaggtggacct 120 ||||| ||||||||||| || ||||||||||| Sbjct: 4624886 gacggcgcgccgtacctgcgcaaggtggacct 4624855
>gb|AC010902.4|AC010902 Homo sapiens clone RP11-549J7, complete sequence Length = 114169 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Plus Query: 6 gaaggagagcaaaggcgccgg 26 ||||||||||||||||||||| Sbjct: 4378 gaaggagagcaaaggcgccgg 4398
>dbj|AP003443.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1144D11 Length = 157943 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Minus Query: 148 gcgcgcggcgctggacgcgct 168 ||||||||||||||||||||| Sbjct: 78899 gcgcgcggcgctggacgcgct 78879
>dbj|AP003924.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1064G04 Length = 186704 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Minus Query: 148 gcgcgcggcgctggacgcgct 168 ||||||||||||||||||||| Sbjct: 8863 gcgcgcggcgctggacgcgct 8843
>dbj|AK111021.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-G10, full insert sequence Length = 975 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 gcgcgcggcgctggacgcgct 168 ||||||||||||||||||||| Sbjct: 488 gcgcgcggcgctggacgcgct 508
>dbj|AK106192.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-E03, full insert sequence Length = 1249 Score = 42.1 bits (21), Expect = 0.54 Identities = 45/53 (84%) Strand = Plus / Plus Query: 68 ctgtacgtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacct 120 |||||||| ||||| |||||||| || || || ||||| ||||||||||||| Sbjct: 559 ctgtacgtcaaggtcagcatggatggtgccccctacctcaggaaggtggacct 611
>dbj|AK105936.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B07, full insert sequence Length = 1240 Score = 42.1 bits (21), Expect = 0.54 Identities = 45/53 (84%) Strand = Plus / Plus Query: 68 ctgtacgtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacct 120 |||||||| ||||| |||||||| || || || ||||| ||||||||||||| Sbjct: 550 ctgtacgtcaaggtcagcatggatggtgccccctacctcaggaaggtggacct 602
>dbj|AK102762.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107D08, full insert sequence Length = 1150 Score = 42.1 bits (21), Expect = 0.54 Identities = 45/53 (84%) Strand = Plus / Plus Query: 68 ctgtacgtgaaggtgagcatggacggggcgccgtaccttcggaaggtggacct 120 |||||||| ||||| |||||||| || || || ||||| ||||||||||||| Sbjct: 530 ctgtacgtcaaggtcagcatggatggtgccccctacctcaggaaggtggacct 582
>gb|AY104734.1| Zea mays PCO138559 mRNA sequence Length = 1116 Score = 42.1 bits (21), Expect = 0.54 Identities = 30/33 (90%) Strand = Plus / Plus Query: 89 gacggggcgccgtaccttcggaaggtggacctg 121 ||||| ||||| ||||| ||||||||||||||| Sbjct: 426 gacggcgcgccctacctgcggaaggtggacctg 458
>gb|J03920.1|SOYAUX22 Soybean auxin-regulated protein (Aux22) mRNA, complete cds Length = 1945 Score = 42.1 bits (21), Expect = 0.54 Identities = 24/25 (96%) Strand = Plus / Plus Query: 69 tgtacgtgaaggtgagcatggacgg 93 ||||||||||||| ||||||||||| Sbjct: 1144 tgtacgtgaaggttagcatggacgg 1168
>gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0029B02, complete sequence Length = 156649 Score = 40.1 bits (20), Expect = 2.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 89 gacggggcgccgtaccttcggaaggtggacct 120 ||||| ||||||||||| || ||||||||||| Sbjct: 135353 gacggcgcgccgtacctgcgcaaggtggacct 135322
>gb|AF440781.1| Streptomyces cinnamonensis polyether antibiotic monensin biosynthesis gene cluster, partial sequence Length = 103450 Score = 40.1 bits (20), Expect = 2.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 137 taccgggagctgcgcgcggcgctg 160 ||||||||||||| |||||||||| Sbjct: 95166 taccgggagctgctcgcggcgctg 95189
>gb|AC011028.11| Homo sapiens chromosome 8, clone RP11-118J17, complete sequence Length = 181598 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 gaggcggggagcaagaggtc 47 |||||||||||||||||||| Sbjct: 74415 gaggcggggagcaagaggtc 74434
>gb|AE004523.1| Pseudomonas aeruginosa PAO1, section 84 of 529 of the complete genome Length = 11418 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 ctgcgcgcggcgctggacgc 165 |||||||||||||||||||| Sbjct: 8440 ctgcgcgcggcgctggacgc 8459
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 gctgcgcgcggcgctggacg 164 |||||||||||||||||||| Sbjct: 2547297 gctgcgcgcggcgctggacg 2547278 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 143 gagctgcgcgcggcgctgg 161 ||||||||||||||||||| Sbjct: 2241304 gagctgcgcgcggcgctgg 2241286 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 142 ggagctgcgcgcggcgctggacg 164 ||||||| ||||||||||||||| Sbjct: 1911289 ggagctgggcgcggcgctggacg 1911267 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 148 gcgcgcggcgctggacgcg 166 ||||||||||||||||||| Sbjct: 1671339 gcgcgcggcgctggacgcg 1671321
>dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0012F14 Length = 168629 Score = 40.1 bits (20), Expect = 2.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 77 aaggtgagcatggacggggcgccgtaccttcggaaggtggacct 120 |||||||||||||| || || || ||||| ||||||||||||| Sbjct: 106722 aaggtgagcatggatggtgctccttacctcaggaaggtggacct 106765
>dbj|AK121989.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033109C03, full insert sequence Length = 1277 Score = 40.1 bits (20), Expect = 2.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 77 aaggtgagcatggacggggcgccgtaccttcggaaggtggacct 120 |||||||||||||| || || || ||||| ||||||||||||| Sbjct: 612 aaggtgagcatggatggtgctccttacctcaggaaggtggacct 655
>dbj|AK100080.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001M24, full insert sequence Length = 1204 Score = 40.1 bits (20), Expect = 2.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 89 gacggggcgccgtaccttcggaaggtggacct 120 ||||| ||||||||||| || ||||||||||| Sbjct: 469 gacggcgcgccgtacctgcgcaaggtggacct 500
>dbj|AK061796.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-G05, full insert sequence Length = 1201 Score = 40.1 bits (20), Expect = 2.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 89 gacggggcgccgtaccttcggaaggtggacct 120 ||||| ||||||||||| || ||||||||||| Sbjct: 466 gacggcgcgccgtacctgcgcaaggtggacct 497
>gb|AF079980.1|AF079980 Microtus ochrogaster oxytocin receptor (OTR) gene, partial cds and promoter sequence Length = 2467 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 ggagctgcgcgcggcgctgg 161 |||||||||||||||||||| Sbjct: 2442 ggagctgcgcgcggcgctgg 2461
>gb|AF012537.1|AF012537 Pseudomonas aeruginosa acetyl-CoA synthetase gene, partial cds; and arginine and ornithine binding protein (aotJ), membrane protein (aotQ), membrane protein (aotM), AotO (aotO), ATPase (aotP), and ArgR (argR) genes, complete cds Length = 6200 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 ctgcgcgcggcgctggacgc 165 |||||||||||||||||||| Sbjct: 3348 ctgcgcgcggcgctggacgc 3367
>gb|AF011922.1|AF011922 Pseudomonas aeruginosa aru gene cluster, ArgR regulatory protein (argR), succinylornithine aminotransferase (aruC), arginine/ornithine succinyltransferase AI subunit (aruF), arginine/ornithine succinyltransferase AII subunit (aruG), succinylglutamate 5-semialdehyde dehydrogenase (aruD), succinylarginine dihydrolase (aruB), succinylglutamate desuccinylase (aruE) genes, complete cds; and alanine tRNA synthetase (alaS) gene, partial cds Length = 12949 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 ctgcgcgcggcgctggacgc 165 |||||||||||||||||||| Sbjct: 461 ctgcgcgcggcgctggacgc 480
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 ggagctgcgcgcggcgctgg 161 |||||||||||||||||||| Sbjct: 2837978 ggagctgcgcgcggcgctgg 2837959
>dbj|AP006398.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT29J15, TM0280b, complete sequence Length = 68747 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 gtgaaggtgagcatggacgg 93 |||||||||||||||||||| Sbjct: 4929 gtgaaggtgagcatggacgg 4910
>dbj|AP001330.3| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1410C5 Length = 163255 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 gaggcggggagcaagaggtc 47 |||||||||||||||||||| Sbjct: 63299 gaggcggggagcaagaggtc 63280
>dbj|AP001208.3| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1930G5 Length = 154587 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 gaggcggggagcaagaggtc 47 |||||||||||||||||||| Sbjct: 141564 gaggcggggagcaagaggtc 141545
>ref|XM_470344.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1345 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 147 tgcgcgcggcgctggacgcgctc 169 ||||||||| ||||||||||||| Sbjct: 240 tgcgcgcggagctggacgcgctc 262
>ref|XM_470345.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1245 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 147 tgcgcgcggcgctggacgcgctc 169 ||||||||| ||||||||||||| Sbjct: 137 tgcgcgcggagctggacgcgctc 159
>ref|XM_472865.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1563 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 151 cgcggcgctggacgcgctc 169 ||||||||||||||||||| Sbjct: 186 cgcggcgctggacgcgctc 204
>gb|AF527809.1| Sorghum bicolor clone BAC SB_BBc0234M12 php200725 orthologous region Length = 108553 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 79 ggtgagcatggacggggcg 97 ||||||||||||||||||| Sbjct: 12607 ggtgagcatggacggggcg 12589
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 145 gctgcgcgcggcgctggacgcgc 167 ||||||||||||||| ||||||| Sbjct: 416190 gctgcgcgcggcgctcgacgcgc 416212
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 145 gctgcgcgcggcgctggacgcgc 167 ||||||||||||||| ||||||| Sbjct: 3263728 gctgcgcgcggcgctcgacgcgc 3263750
>gb|AC165177.2| Zea mays clone ZMMBBb-188L18, complete sequence Length = 137852 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 22 gccggcgaggcggggagca 40 ||||||||||||||||||| Sbjct: 3812 gccggcgaggcggggagca 3830
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 147 tgcgcgcggcgctggacgc 165 ||||||||||||||||||| Sbjct: 5140692 tgcgcgcggcgctggacgc 5140674
>gb|AC092557.7| Oryza sativa chromosome 3 BAC OSJNBa0096I06 genomic sequence, complete sequence Length = 164352 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 147 tgcgcgcggcgctggacgcgctc 169 ||||||||| ||||||||||||| Sbjct: 5909 tgcgcgcggagctggacgcgctc 5887 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 147 tgcgcgcggcgctggacgcgctc 169 ||||||||| ||||||||||||| Sbjct: 1694 tgcgcgcggagctggacgcgctc 1672
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 145 gctgcgcgcggcgctggac 163 ||||||||||||||||||| Sbjct: 100662 gctgcgcgcggcgctggac 100644
>ref|XM_748163.1| Aspergillus fumigatus Af293 hypothetical protein (Afu5g14010) partial mRNA Length = 1239 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 27 cgaggcggggagcaagagg 45 ||||||||||||||||||| Sbjct: 363 cgaggcggggagcaagagg 381
>gb|AY310323.1| Streptomyces sp. FR-008 heptaene macrolide complex synthesis gene cluster, complete sequence Length = 138203 Score = 38.2 bits (19), Expect = 8.5 Identities = 25/27 (92%) Strand = Plus / Minus Query: 142 ggagctgcgcgcggcgctggacgcgct 168 |||||||| ||||| |||||||||||| Sbjct: 75965 ggagctgctcgcggggctggacgcgct 75939
>gb|AC125277.1| Mus musculus BAC clone RP24-554P24 from 13, complete sequence Length = 141866 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 72 acgtgaaggtgagcatgga 90 ||||||||||||||||||| Sbjct: 21910 acgtgaaggtgagcatgga 21928
>gb|AC145782.1| Pan troglodytes BAC clone CH251-481A23 from Y, complete sequence Length = 184214 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 6 gaaggagagcaaaggcgcc 24 ||||||||||||||||||| Sbjct: 56521 gaaggagagcaaaggcgcc 56539
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 147 tgcgcgcggcgctggacgcgctc 169 ||||||||||||| ||||||||| Sbjct: 2410393 tgcgcgcggcgctcgacgcgctc 2410371
>gb|AY289602.1| Pinus taeda auxin-induced protein 3 (IAA3) mRNA, complete cds Length = 1236 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 68 ctgtacgtgaaggtgagcatgga 90 ||||| ||||||||||||||||| Sbjct: 522 ctgtatgtgaaggtgagcatgga 544
>emb|BX640452.1| Bordetella bronchiseptica strain RB50, complete genome; segment 16/16 Length = 123385 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 143 gagctgcgcgcggcgctgg 161 ||||||||||||||||||| Sbjct: 16160 gagctgcgcgcggcgctgg 16142
>emb|BX640436.1| Bordetella parapertussis strain 12822, complete genome; segment 14/14 Length = 255260 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 143 gagctgcgcgcggcgctgg 161 ||||||||||||||||||| Sbjct: 151988 gagctgcgcgcggcgctgg 151970
>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16 Length = 349497 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 143 gagctgcgcgcggcgctggacgc 165 ||||||||||| ||||||||||| Sbjct: 327272 gagctgcgcgccgcgctggacgc 327250
>emb|BX640426.1| Bordetella parapertussis strain 12822, complete genome; segment 4/14 Length = 348866 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 143 gagctgcgcgcggcgctggacgc 165 ||||||||||| ||||||||||| Sbjct: 91145 gagctgcgcgccgcgctggacgc 91123
>emb|BX640420.1| Bordetella pertussis strain Tohama I, complete genome; segment 10/12 Length = 348134 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 148 gcgcgcggcgctggacgcg 166 ||||||||||||||||||| Sbjct: 264163 gcgcgcggcgctggacgcg 264145
>emb|BX640419.1| Bordetella pertussis strain Tohama I, complete genome; segment 9/12 Length = 349672 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 143 gagctgcgcgcggcgctggacgc 165 ||||||||||| ||||||||||| Sbjct: 347346 gagctgcgcgccgcgctggacgc 347368
>emb|BX640411.1| Bordetella pertussis strain Tohama I, complete genome; segment 1/12 Length = 346359 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 143 gagctgcgcgcggcgctgg 161 ||||||||||||||||||| Sbjct: 131649 gagctgcgcgcggcgctgg 131667
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 145 gctgcgcgcggcgctggacgcgc 167 ||||||||||||||| ||||||| Sbjct: 2993595 gctgcgcgcggcgctcgacgcgc 2993617
>emb|AL731582.2|OSJN00232 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0022H21, complete sequence Length = 160155 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 151 cgcggcgctggacgcgctc 169 ||||||||||||||||||| Sbjct: 113109 cgcggcgctggacgcgctc 113091
>dbj|BS000607.1| Pan troglodytes chromosome Y clone:PTB-081L16, complete sequences Length = 178480 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 6 gaaggagagcaaaggcgcc 24 ||||||||||||||||||| Sbjct: 167889 gaaggagagcaaaggcgcc 167907
>dbj|BS000608.1| Pan troglodytes chromosome Y clone:PTB-131K23, complete sequences Length = 194068 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 6 gaaggagagcaaaggcgcc 24 ||||||||||||||||||| Sbjct: 94428 gaaggagagcaaaggcgcc 94446
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 147 tgcgcgcggcgctggacgcgctc 169 ||||||||||| ||||||||||| Sbjct: 61551 tgcgcgcggcgatggacgcgctc 61573
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 145 gctgcgcgcggcgctggacgcgc 167 ||||||||||||||||| ||||| Sbjct: 3737566 gctgcgcgcggcgctggccgcgc 3737588 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 145 gctgcgcgcggcgctggacgcgc 167 ||||||||||||||||| ||||| Sbjct: 2996864 gctgcgcgcggcgctggccgcgc 2996886 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 146 ctgcgcgcggcgctggacg 164 ||||||||||||||||||| Sbjct: 2220756 ctgcgcgcggcgctggacg 2220738
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 6 gaaggagagcaaaggcgcc 24 ||||||||||||||||||| Sbjct: 681513 gaaggagagcaaaggcgcc 681531
>gb|AE012497.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 405 of 460 of the complete genome Length = 13105 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 145 gctgcgcgcggcgctggac 163 ||||||||||||||||||| Sbjct: 6262 gctgcgcgcggcgctggac 6280
>gb|AC165267.2| Zea mays clone ZMMBBb-151F20, complete sequence Length = 115478 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 22 gccggcgaggcggggagca 40 ||||||||||||||||||| Sbjct: 21988 gccggcgaggcggggagca 21970
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 143 gagctgcgcgcggcgctgg 161 ||||||||||||||||||| Sbjct: 2221008 gagctgcgcgcggcgctgg 2220990
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 145 gctgcgcgcggcgctggac 163 ||||||||||||||||||| Sbjct: 4533739 gctgcgcgcggcgctggac 4533757
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 140 cgggagctgcgcgcggcgc 158 ||||||||||||||||||| Sbjct: 4918590 cgggagctgcgcgcggcgc 4918572
>gb|DQ020253.1|DQ020253S1 Streptomyces sp. UNSW 094300 type I PKS gene, partial cds Length = 1653 Score = 38.2 bits (19), Expect = 8.5 Identities = 25/27 (92%) Strand = Plus / Plus Query: 142 ggagctgcgcgcggcgctggacgcgct 168 |||||||| ||||| |||||||||||| Sbjct: 1560 ggagctgctcgcggggctggacgcgct 1586
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 151 cgcggcgctggacgcgctc 169 ||||||||||||||||||| Sbjct: 37377 cgcggcgctggacgcgctc 37359
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 151 cgcggcgctggacgcgctc 169 ||||||||||||||||||| Sbjct: 23792197 cgcggcgctggacgcgctc 23792179
>emb|BX824584.1|CNS0A4VR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH58ZC08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1234 Score = 38.2 bits (19), Expect = 8.5 Identities = 31/35 (88%) Strand = Plus / Plus Query: 77 aaggtgagcatggacggggcgccgtaccttcggaa 111 ||||| ||||||||||| || |||||||| ||||| Sbjct: 535 aaggttagcatggacggtgcaccgtacctacggaa 569
>gb|AC104487.3| Oryza sativa chromosome 3 BAC OSJNBa0042I09 genomic sequence, complete sequence Length = 171376 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 147 tgcgcgcggcgctggacgcgctc 169 ||||||||| ||||||||||||| Sbjct: 158739 tgcgcgcggagctggacgcgctc 158717 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 147 tgcgcgcggcgctggacgcgctc 169 ||||||||| ||||||||||||| Sbjct: 154524 tgcgcgcggagctggacgcgctc 154502
>dbj|AP008227.1| Thermus thermophilus HB8 plasmid pTT27 DNA, complete sequence Length = 256992 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 aaggcgccggcgaggcggg 35 ||||||||||||||||||| Sbjct: 27793 aaggcgccggcgaggcggg 27775
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 139 ccgggagctgcgcgcggcgctgg 161 |||||||||||| |||||||||| Sbjct: 2765514 ccgggagctgcgggcggcgctgg 2765492 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 145 gctgcgcgcggcgctggac 163 ||||||||||||||||||| Sbjct: 1711655 gctgcgcgcggcgctggac 1711637
>ref|XM_316861.2| Anopheles gambiae str. PEST ENSANGP00000013136 (ENSANGG00000010647), partial mRNA Length = 2946 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 gcggcgaaggagagcaaag 19 ||||||||||||||||||| Sbjct: 1111 gcggcgaaggagagcaaag 1129
>emb|AJ937741.1| Streptomyces ambofaciens ATCC 23877 right terminal inverted repeat Length = 243019 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 140 cgggagctgcgcgcggcgctgga 162 ||||||||||||||||| ||||| Sbjct: 226877 cgggagctgcgcgcggccctgga 226855
>dbj|AB088224.1| Streptomyces rochei plasmid pSLA2-L DNA, complete sequence Length = 210614 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 151 cgcggcgctggacgcgctc 169 ||||||||||||||||||| Sbjct: 82781 cgcggcgctggacgcgctc 82763
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 145 gctgcgcgcggcgctggacgcgc 167 ||||||||||||||||| ||||| Sbjct: 3721991 gctgcgcgcggcgctggccgcgc 3722013 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 145 gctgcgcgcggcgctggacgcgc 167 ||||||||||||||||| ||||| Sbjct: 3715881 gctgcgcgcggcgctggccgcgc 3715903 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 145 gctgcgcgcggcgctggacgcgc 167 ||||||||||||||||| ||||| Sbjct: 3012324 gctgcgcgcggcgctggccgcgc 3012346 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 146 ctgcgcgcggcgctggacg 164 ||||||||||||||||||| Sbjct: 2241782 ctgcgcgcggcgctggacg 2241764
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 145 gctgcgcgcggcgctggacgcgc 167 ||||||||||||||||| ||||| Sbjct: 1127642 gctgcgcgcggcgctggtcgcgc 1127664
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 38.2 bits (19), Expect = 8.5 Identities = 25/27 (92%) Strand = Plus / Minus Query: 144 agctgcgcgcggcgctggacgcgctct 170 |||||||| |||||||||||| ||||| Sbjct: 2836842 agctgcgcccggcgctggacgagctct 2836816 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 144 agctgcgcgcggcgctgga 162 ||||||||||||||||||| Sbjct: 1497038 agctgcgcgcggcgctgga 1497020 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 148 gcgcgcggcgctggacgcg 166 ||||||||||||||||||| Sbjct: 965006 gcgcgcggcgctggacgcg 965024
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 145 gctgcgcgcggcgctggac 163 ||||||||||||||||||| Sbjct: 4629216 gctgcgcgcggcgctggac 4629198
>emb|AJ748832.1| Streptomyces lividus lividomycin biosynthesis gene cluster Length = 40579 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 143 gagctgcgcgcggcgctgg 161 ||||||||||||||||||| Sbjct: 21331 gagctgcgcgcggcgctgg 21313
>gb|AE017222.1| Thermus thermophilus HB27 plasmid pTT27, complete sequence Length = 232605 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 aaggcgccggcgaggcggg 35 ||||||||||||||||||| Sbjct: 224503 aaggcgccggcgaggcggg 224485
>gb|AC163685.4| Mus musculus BAC clone RP23-4M16 from chromosome 13, complete sequence Length = 242910 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 72 acgtgaaggtgagcatgga 90 ||||||||||||||||||| Sbjct: 75698 acgtgaaggtgagcatgga 75716 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 837,517 Number of Sequences: 3902068 Number of extensions: 837517 Number of successful extensions: 66689 Number of sequences better than 10.0: 156 Number of HSP's better than 10.0 without gapping: 161 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 61832 Number of HSP's gapped (non-prelim): 4857 length of query: 174 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 152 effective length of database: 17,147,199,772 effective search space: 2606374365344 effective search space used: 2606374365344 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
