Clone Information

BLAST Search Result

Clone Name	basd27a24
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	Y2619_XYLFA (Q9PA99) UPF0061 protein Xf2619	96	2e-20
2	Y1992_XYLFT (Q87A39) UPF0061 protein PD1992	96	3e-20
3	Y2284_XANCP (Q8P8F8) UPF0061 protein XCC2284	94	1e-19
4	Y2392_XANAC (Q8PJY5) UPF0061 protein XAC2392	92	4e-19
5	Y9953_RHOBA (Q7UKT5) UPF0061 protein RB9953	90	1e-18
6	SELO_MOUSE (Q9DBC0) Selenoprotein O	68	7e-12
7	SELO_HUMAN (Q9BVL4) Selenoprotein O	67	1e-11
8	Y982_RHIME (Q92RB2) UPF0061 protein R00982	65	6e-11
9	YDIU_ECO57 (Q8X5W3) UPF0061 protein ydiU	63	2e-10
10	YDIU_SHIFL (Q83L33) UPF0061 protein ydiU	63	2e-10
11	Y1893_COREF (Q8FP92) UPF0061 protein CE1893	62	3e-10
12	Y4142_BRAJA (Q89MQ0) UPF0061 protein bll4142	61	6e-10
13	Y3499_BACCR (Q813A5) UPF0061 protein BC_3499	61	6e-10
14	YDIU_ECOLI (P77649) UPF0061 protein ydiU	61	8e-10
15	Y1733_CHRVO (Q7NX94) UPF0061 protein CV_1733	61	8e-10
16	Y3567_BACAN (Q81YI0) UPF0061 protein BA3567/GBAA3567/BAS3307	60	1e-09
17	Y3939_BACHD (Q9K5Z6) UPF0061 protein BH3939	60	2e-09
18	Y035_CLOPE (Q06373) UPF0061 protein CPE0035 (ORF 2)	59	4e-09
19	YDIU_ECOL6 (Q8FH30) UPF0061 protein ydiU	58	5e-09
20	YDIU_SALTY (Q8ZPS5) UPF0061 protein ydiU	57	2e-08
21	YDIU_SALTI (Q8Z6I8) UPF0061 protein ydiU	57	2e-08
22	Y945_AGRT5 (Q8UGU0) UPF0061 protein Atu0945/AGR_C_1725	55	3e-08
23	Y1748_RALSO (Q8XYL0) UPF0061 protein RSc1748	53	2e-07
24	Y2107_BORBR (Q7WKJ9) UPF0061 protein BB2107	52	4e-07
25	Y1919_BORPA (Q7W954) UPF0061 protein BPP1919	52	4e-07
26	Y1999_CORGL (Q8NP26) UPF0061 protein Cgl1999/cg2190	52	4e-07
27	Y1090_BORPE (Q7VZ47) UPF0061 protein BP1090	52	4e-07
28	Y330_SHEON (Q8EJX6) UPF0061 protein SO0330	49	2e-06
29	Y5028_PSESM (Q87VB1) UPF0061 protein PSPTO5028	46	3e-05
30	Y5023_PSEAE (Q9HUE6) UPF0061 protein PA5023	45	6e-05
31	Y1633_SYNEL (Q8DIF6) UPF0061 protein tll1633	45	6e-05
32	YE35_SCHPO (O13890) UPF0061 protein C20G4.05c	44	1e-04
33	Y596_GLOVI (Q7NN18) UPF0061 protein gll0596	42	5e-04
34	YP222_YEAST (Q08968) UPF0061 protein YPL222w	41	9e-04
35	Y5068_PSEPK (Q88CW2) UPF0061 protein PP5068	38	0.008
36	Y1931_VIBCH (Q9KQR7) UPF0061 protein VC1931	38	0.008
37	Y2876_ANASP (Q8YT50) UPF0061 protein All2876	37	0.010
38	YU61_VIBMA (Q9RA11) UPF0061 protein ORF18	36	0.022
39	Y909_VIBPA (Q87R88) UPF0061 protein VP0909	35	0.064
40	Y039_VIBVU (Q8DG12) UPF0061 protein VV1_0039	31	0.70
41	Y1089_VIBVY (Q7MMI2) UPF0061 protein VV1089	31	0.92
42	YP93_CAEEL (Q09475) Putative helicase C28H8.3 (EC 3.6.1.-)	30	1.6
43	SNF1_CANGA (Q00372) Carbon catabolite derepressing protein kinas...	30	2.0
44	EFG_SYMTH (Q67JU0) Elongation factor G (EF-G)	29	2.7
45	YCND_BACSU (P94424) Hypothetical oxidoreductase ycnD (EC 1.-.-.-)	29	2.7
46	P4HA1_CAEEL (Q10576) Prolyl 4-hydroxylase alpha-1 subunit precur...	29	2.7
47	GLGB_MYCPA (Q73X75) 1,4-alpha-glucan branching enzyme (EC 2.4.1....	29	2.7
48	YO01_BPL2 (P42536) Hypothetical 66.6 kDa protein (ORF1)	28	4.6
49	SARDH_HUMAN (Q9UL12) Sarcosine dehydrogenase, mitochondrial prec...	28	6.0
50	GLGB_CHLCV (Q823Y5) 1,4-alpha-glucan branching enzyme (EC 2.4.1....	28	7.8

>Y2619_XYLFA (Q9PA99) UPF0061 protein Xf2619|
          Length = 519

 Score = 95.9 bits (237), Expect = 2e-20
 Identities = 43/76 (56%), Positives = 60/76 (78%)
 Frame = +2

Query: 2   IPTTRALCLVETGKSVVRDMFYDGNAKEEPGAIVCRLAPSFLRFGSYQIHATRGKEDLEI 181
           IPTTRAL L+ TG +V+RDM YDG+   EP AIVCR+APSF+RFG++++ A+RG  D+++
Sbjct: 158 IPTTRALSLIATGDTVIRDMLYDGHPAPEPSAIVCRVAPSFVRFGTFELPASRG--DIDL 215

Query: 182 VRRLADYAIRHHYPHL 229
           +RRL ++ I   YPHL
Sbjct: 216 LRRLVEFTIMRDYPHL 231

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>Y1992_XYLFT (Q87A39) UPF0061 protein PD1992|
          Length = 519

 Score = 95.5 bits (236), Expect = 3e-20
 Identities = 43/76 (56%), Positives = 60/76 (78%)
 Frame = +2

Query: 2   IPTTRALCLVETGKSVVRDMFYDGNAKEEPGAIVCRLAPSFLRFGSYQIHATRGKEDLEI 181
           IPTTRAL L+ TG +V+RDM YDG+   EP AIVCR+APSF+RFG++++ A+RG  D+++
Sbjct: 158 IPTTRALSLIATGDTVIRDMLYDGHPAPEPSAIVCRVAPSFIRFGTFELPASRG--DIDL 215

Query: 182 VRRLADYAIRHHYPHL 229
           +RRL ++ I   YPHL
Sbjct: 216 LRRLVEFTIIRDYPHL 231

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>Y2284_XANCP (Q8P8F8) UPF0061 protein XCC2284|
          Length = 518

 Score = 93.6 bits (231), Expect = 1e-19
 Identities = 42/76 (55%), Positives = 60/76 (78%)
 Frame = +2

Query: 2   IPTTRALCLVETGKSVVRDMFYDGNAKEEPGAIVCRLAPSFLRFGSYQIHATRGKEDLEI 181
           +PTTRAL LV TG +VVRDMFYDG+ + EPGAIVCR+APSF+RFG++++ A RG  D+++
Sbjct: 158 VPTTRALSLVGTGDAVVRDMFYDGHPRREPGAIVCRVAPSFIRFGNFELPAARG--DVDL 215

Query: 182 VRRLADYAIRHHYPHL 229
           +R+  D+ +   +P L
Sbjct: 216 LRQWVDFTLARDFPDL 231

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>Y2392_XANAC (Q8PJY5) UPF0061 protein XAC2392|
          Length = 518

 Score = 91.7 bits (226), Expect = 4e-19
 Identities = 42/76 (55%), Positives = 59/76 (77%)
 Frame = +2

Query: 2   IPTTRALCLVETGKSVVRDMFYDGNAKEEPGAIVCRLAPSFLRFGSYQIHATRGKEDLEI 181
           +PTTRAL LV TG +VVRDMFYDG+ + EPGAIVCR+APSF+RFG++++ + RG  D+ +
Sbjct: 158 VPTTRALSLVGTGDAVVRDMFYDGHPQREPGAIVCRVAPSFIRFGNFELPSARG--DIAL 215

Query: 182 VRRLADYAIRHHYPHL 229
           +R+  D+ I   +P L
Sbjct: 216 LRQWVDFTIARDFPAL 231

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>Y9953_RHOBA (Q7UKT5) UPF0061 protein RB9953|
          Length = 540

 Score = 90.1 bits (222), Expect = 1e-18
 Identities = 43/76 (56%), Positives = 59/76 (77%)
 Frame = +2

Query: 2   IPTTRALCLVETGKSVVRDMFYDGNAKEEPGAIVCRLAPSFLRFGSYQIHATRGKEDLEI 181
           +PTTRAL LV TG+ V+RDMFYDG+ + E GAIVCR+APSF+RFG+++I A+R  ED E 
Sbjct: 160 VPTTRALSLVLTGEKVLRDMFYDGHPEHELGAIVCRVAPSFIRFGNFEIFASR--EDTET 217

Query: 182 VRRLADYAIRHHYPHL 229
           ++ L ++ IR  + HL
Sbjct: 218 LQTLVEHTIRSEFSHL 233

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>SELO_MOUSE (Q9DBC0) Selenoprotein O|
          Length = 667

 Score = 67.8 bits (164), Expect = 7e-12
 Identities = 37/88 (42%), Positives = 54/88 (61%), Gaps = 11/88 (12%)
 Frame = +2

Query: 2   IPTTRALCLVETGKSVVRDMFYDGNAKEEPGAIVCRLAPSFLRFGSYQI------HATR- 160
           IPTTRA   V +  +V+RD+FYDGN K E   +V R+AP+F+RFGS++I      H  R 
Sbjct: 212 IPTTRAGACVTSESTVMRDVFYDGNPKYEKCTVVLRIAPTFIRFGSFEIFKPPDEHTGRA 271

Query: 161 ----GKEDLEIVRRLADYAIRHHYPHLE 232
               G++D+ +  +L DY I   YP ++
Sbjct: 272 GPSVGRDDIRV--QLLDYVISSFYPEIQ 297

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>SELO_HUMAN (Q9BVL4) Selenoprotein O|
          Length = 669

 Score = 67.0 bits (162), Expect = 1e-11
 Identities = 39/101 (38%), Positives = 57/101 (56%), Gaps = 11/101 (10%)
 Frame = +2

Query: 2   IPTTRALCLVETGKSVVRDMFYDGNAKEEPGAIVCRLAPSFLRFGSYQI------HATR- 160
           +PTTRA   V +  +VVRD+FYDGN K E   +V R+A +F+RFGS++I      H  R 
Sbjct: 211 VPTTRAGACVTSESTVVRDVFYDGNPKYEQCTVVLRVASTFIRFGSFEIFKSADEHTGRA 270

Query: 161 ----GKEDLEIVRRLADYAIRHHYPHLENIKKSEGLSFEAA 271
               G+ D+ +  +L DY I   YP ++    S+ +   AA
Sbjct: 271 GPSVGRNDIRV--QLLDYVISSFYPEIQAAHASDSVQRNAA 309

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>Y982_RHIME (Q92RB2) UPF0061 protein R00982|
          Length = 490

 Score = 64.7 bits (156), Expect = 6e-11
 Identities = 35/81 (43%), Positives = 47/81 (58%)
 Frame = +2

Query: 2   IPTTRALCLVETGKSVVRDMFYDGNAKEEPGAIVCRLAPSFLRFGSYQIHATRGKEDLEI 181
           +PTTRAL    TG+ V R+          PGA+  R+A S +R G++Q  A RG  D+E 
Sbjct: 144 VPTTRALAATATGQPVYREQIL-------PGAVFTRVAASHIRVGTFQFFAARG--DMES 194

Query: 182 VRRLADYAIRHHYPHLENIKK 244
           +R LADY I  HYP L+  +K
Sbjct: 195 IRTLADYVIGRHYPELKTDEK 215

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>YDIU_ECO57 (Q8X5W3) UPF0061 protein ydiU|
          Length = 478

 Score = 63.2 bits (152), Expect = 2e-10
 Identities = 38/97 (39%), Positives = 57/97 (58%)
 Frame = +2

Query: 2   IPTTRALCLVETGKSVVRDMFYDGNAKEEPGAIVCRLAPSFLRFGSYQIHATRGKEDLEI 181
           IPTTRAL +V +   V R+         EPGA++ R+APS LRFG ++    R + D   
Sbjct: 142 IPTTRALSIVTSDSPVYRETV-------EPGAMLMRVAPSHLRFGHFEHFYYRREPDK-- 192

Query: 182 VRRLADYAIRHHYPHLENIKKSEGLSFEAAIGDSPAI 292
           VR+LAD+AIRH++ HLE+ +    L F   +  + ++
Sbjct: 193 VRQLADFAIRHYWSHLEDDEDKYRLWFNDVVARTASL 229

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>YDIU_SHIFL (Q83L33) UPF0061 protein ydiU|
          Length = 478

 Score = 62.8 bits (151), Expect = 2e-10
 Identities = 38/97 (39%), Positives = 57/97 (58%)
 Frame = +2

Query: 2   IPTTRALCLVETGKSVVRDMFYDGNAKEEPGAIVCRLAPSFLRFGSYQIHATRGKEDLEI 181
           IPTTRAL +V +   V R+         EPGA++ R+APS LRFG ++    R   + E 
Sbjct: 142 IPTTRALSIVTSDSPVYRETV-------EPGAMLMRVAPSHLRFGHFEHFYYR--REPEK 192

Query: 182 VRRLADYAIRHHYPHLENIKKSEGLSFEAAIGDSPAI 292
           VR+LAD+AIRH++ HLE+ +    L F   +  + ++
Sbjct: 193 VRQLADFAIRHYWSHLEDDEDKYRLWFNDVVARTASL 229

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>Y1893_COREF (Q8FP92) UPF0061 protein CE1893|
          Length = 492

 Score = 62.4 bits (150), Expect = 3e-10
 Identities = 36/76 (47%), Positives = 46/76 (60%)
 Frame = +2

Query: 2   IPTTRALCLVETGKSVVRDMFYDGNAKEEPGAIVCRLAPSFLRFGSYQIHATRGKEDLEI 181
           +PTTRAL +V TG+ + RD       +  PGA+V R+A S +R GS+Q     G  DL  
Sbjct: 159 VPTTRALAVVTTGRKIQRD-------RVLPGAVVVRVATSHIRVGSFQYANITGGIDLS- 210

Query: 182 VRRLADYAIRHHYPHL 229
            RRLAD+AI  HYP L
Sbjct: 211 -RRLADHAITRHYPRL 225

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>Y4142_BRAJA (Q89MQ0) UPF0061 protein bll4142|
          Length = 491

 Score = 61.2 bits (147), Expect = 6e-10
 Identities = 33/76 (43%), Positives = 46/76 (60%)
 Frame = +2

Query: 2   IPTTRALCLVETGKSVVRDMFYDGNAKEEPGAIVCRLAPSFLRFGSYQIHATRGKEDLEI 181
           IPTTR+L  V TG+ V+R+          PGA++ R+A S +R G++Q  A R   D + 
Sbjct: 146 IPTTRSLAAVVTGEHVIRETAL-------PGAVLTRVAASHIRVGTFQFFAVR--RDTDA 196

Query: 182 VRRLADYAIRHHYPHL 229
           +RRLAD+ I  HYP L
Sbjct: 197 IRRLADHVIARHYPEL 212

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>Y3499_BACCR (Q813A5) UPF0061 protein BC_3499|
          Length = 488

 Score = 61.2 bits (147), Expect = 6e-10
 Identities = 33/78 (42%), Positives = 49/78 (62%)
 Frame = +2

Query: 2   IPTTRALCLVETGKSVVRDMFYDGNAKEEPGAIVCRLAPSFLRFGSYQIHATRGKEDLEI 181
           IPTTR+L +V TG+   R+        + PGAI+ R+A S +R G++Q  A RG   +E 
Sbjct: 149 IPTTRSLAVVTTGEPTYRET-------KLPGAILTRVASSHIRVGTFQYAAARGS--IED 199

Query: 182 VRRLADYAIRHHYPHLEN 235
           ++ LADY I+ HYP +E+
Sbjct: 200 LKSLADYTIKRHYPEIES 217

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>YDIU_ECOLI (P77649) UPF0061 protein ydiU|
          Length = 478

 Score = 60.8 bits (146), Expect = 8e-10
 Identities = 37/97 (38%), Positives = 56/97 (57%)
 Frame = +2

Query: 2   IPTTRALCLVETGKSVVRDMFYDGNAKEEPGAIVCRLAPSFLRFGSYQIHATRGKEDLEI 181
           IPTTRAL +V +   V R+         EPGA++ R+APS LRFG ++    R   + E 
Sbjct: 142 IPTTRALSIVTSDSPVYRET-------AEPGAMLMRVAPSHLRFGHFEHFYYR--RESEK 192

Query: 182 VRRLADYAIRHHYPHLENIKKSEGLSFEAAIGDSPAI 292
           VR+LAD+AIRH++ HL + +    L F   +  + ++
Sbjct: 193 VRQLADFAIRHYWSHLADDEDKYRLWFSDVVARTASL 229

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>Y1733_CHRVO (Q7NX94) UPF0061 protein CV_1733|
          Length = 478

 Score = 60.8 bits (146), Expect = 8e-10
 Identities = 37/96 (38%), Positives = 54/96 (56%)
 Frame = +2

Query: 2   IPTTRALCLVETGKSVVRDMFYDGNAKEEPGAIVCRLAPSFLRFGSYQIHATRGKEDLEI 181
           IPTTRAL +  TG+ V R+       +  PGA++ R+A S LR G++Q  A RG  +  +
Sbjct: 132 IPTTRALAVTTTGEPVYRE-------RPLPGAVLTRVAASHLRVGTFQYFAIRG--ETAM 182

Query: 182 VRRLADYAIRHHYPHLENIKKSEGLSFEAAIGDSPA 289
           + +LADY I  HYP L   +    L+  AA+ +  A
Sbjct: 183 LNKLADYTIARHYPQLAG-RDGRHLALLAAVAERQA 217

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>Y3567_BACAN (Q81YI0) UPF0061 protein BA3567/GBAA3567/BAS3307|
          Length = 488

 Score = 60.5 bits (145), Expect = 1e-09
 Identities = 33/77 (42%), Positives = 48/77 (62%)
 Frame = +2

Query: 2   IPTTRALCLVETGKSVVRDMFYDGNAKEEPGAIVCRLAPSFLRFGSYQIHATRGKEDLEI 181
           IPTTR+L +V TG+   R+        + PGAI+ R+A S +R G++Q  A RG   +E 
Sbjct: 149 IPTTRSLAVVTTGEPTYRET-------KLPGAILTRVASSHIRVGTFQYAAARGS--IED 199

Query: 182 VRRLADYAIRHHYPHLE 232
           ++ LADY I+ HYP +E
Sbjct: 200 LQSLADYTIKRHYPEIE 216

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>Y3939_BACHD (Q9K5Z6) UPF0061 protein BH3939|
          Length = 492

 Score = 59.7 bits (143), Expect = 2e-09
 Identities = 34/86 (39%), Positives = 52/86 (60%)
 Frame = +2

Query: 2   IPTTRALCLVETGKSVVRDMFYDGNAKEEPGAIVCRLAPSFLRFGSYQIHATRGKEDLEI 181
           IPTTR+L +V TG+SV R+          PGAI+ R+A S +R G++Q  A  G E  E 
Sbjct: 152 IPTTRSLAVVTTGESVFRETVL-------PGAILTRVAASHIRVGTFQFVANAGSE--EE 202

Query: 182 VRRLADYAIRHHYPHLENIKKSEGLS 259
           ++ LADY +  H+P +E  +++  L+
Sbjct: 203 LKALADYTLARHFPEVEADRENRYLA 228

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>Y035_CLOPE (Q06373) UPF0061 protein CPE0035 (ORF 2)|
          Length = 490

 Score = 58.5 bits (140), Expect = 4e-09
 Identities = 35/91 (38%), Positives = 53/91 (58%)
 Frame = +2

Query: 2   IPTTRALCLVETGKSVVRDMFYDGNAKEEPGAIVCRLAPSFLRFGSYQIHATRGKEDLEI 181
           IPTTR+L +V TG+ V+R+ F       E GAI+ R+A S +R G++   A  G   LE 
Sbjct: 152 IPTTRSLAVVSTGEEVLRERF-------EQGAILTRIASSHIRVGTFAYAAQWG--TLED 202

Query: 182 VRRLADYAIRHHYPHLENIKKSEGLSFEAAI 274
           ++ LADY I+ H+P++ + +    L  E  I
Sbjct: 203 LKSLADYTIKRHFPNIADNENKYILFLEEVI 233

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>YDIU_ECOL6 (Q8FH30) UPF0061 protein ydiU|
          Length = 478

 Score = 58.2 bits (139), Expect = 5e-09
 Identities = 36/97 (37%), Positives = 56/97 (57%)
 Frame = +2

Query: 2   IPTTRALCLVETGKSVVRDMFYDGNAKEEPGAIVCRLAPSFLRFGSYQIHATRGKEDLEI 181
           IPTTRAL +V +   V R+         E GA++ R+APS LRFG ++    R   + E 
Sbjct: 142 IPTTRALSIVTSDSPVYRETV-------ESGAMLMRVAPSHLRFGHFEHFYYR--REPEK 192

Query: 182 VRRLADYAIRHHYPHLENIKKSEGLSFEAAIGDSPAI 292
           VR+LAD+AIRH++ HL++ +    L F   +  + ++
Sbjct: 193 VRQLADFAIRHYWSHLDDEEDKYRLWFTDVVARTASL 229

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>YDIU_SALTY (Q8ZPS5) UPF0061 protein ydiU|
          Length = 480

 Score = 56.6 bits (135), Expect = 2e-08
 Identities = 34/88 (38%), Positives = 53/88 (60%)
 Frame = +2

Query: 2   IPTTRALCLVETGKSVVRDMFYDGNAKEEPGAIVCRLAPSFLRFGSYQIHATRGKEDLEI 181
           IPTTRAL +V +   V R+        +E GA++ RLA S +RFG ++    R   + E 
Sbjct: 144 IPTTRALSIVTSDTPVQRET-------QETGAMLMRLAQSHMRFGHFEHFYYR--REPEK 194

Query: 182 VRRLADYAIRHHYPHLENIKKSEGLSFE 265
           V++LAD+AIRH++P  +++ +   L FE
Sbjct: 195 VQQLADFAIRHYWPQWQDVPEKYALWFE 222

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>YDIU_SALTI (Q8Z6I8) UPF0061 protein ydiU|
          Length = 480

 Score = 56.6 bits (135), Expect = 2e-08
 Identities = 34/88 (38%), Positives = 53/88 (60%)
 Frame = +2

Query: 2   IPTTRALCLVETGKSVVRDMFYDGNAKEEPGAIVCRLAPSFLRFGSYQIHATRGKEDLEI 181
           IPTTRAL +V +   V R+        +E GA++ RLA S +RFG ++    R   + E 
Sbjct: 144 IPTTRALSIVASDTPVQRET-------QETGAMLMRLAQSHMRFGHFEHFYYR--REPEK 194

Query: 182 VRRLADYAIRHHYPHLENIKKSEGLSFE 265
           V++LAD+AIRH++P  +++ +   L FE
Sbjct: 195 VQQLADFAIRHYWPQWQDVAEKYALWFE 222

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>Y945_AGRT5 (Q8UGU0) UPF0061 protein Atu0945/AGR_C_1725|
          Length = 487

 Score = 55.5 bits (132), Expect = 3e-08
 Identities = 33/78 (42%), Positives = 43/78 (55%)
 Frame = +2

Query: 2   IPTTRALCLVETGKSVVRDMFYDGNAKEEPGAIVCRLAPSFLRFGSYQIHATRGKEDLEI 181
           IP TRAL  V +G  V R++         PG +  R+A S +R G++Q  A R  ED E 
Sbjct: 143 IPATRALAAVLSGDRVQREVGL-------PGGVFTRVAASHIRVGTFQFFAAR--EDDEA 193

Query: 182 VRRLADYAIRHHYPHLEN 235
           +R LADY I  HYP  +N
Sbjct: 194 IRSLADYVIDRHYPDAKN 211

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>Y1748_RALSO (Q8XYL0) UPF0061 protein RSc1748|
          Length = 525

 Score = 52.8 bits (125), Expect = 2e-07
 Identities = 32/74 (43%), Positives = 41/74 (55%)
 Frame = +2

Query: 2   IPTTRALCLVETGKSVVRDMFYDGNAKEEPGAIVCRLAPSFLRFGSYQIHATRGKEDLEI 181
           IPTTRALC++     V R+         E  A+V RLAPSF+RFG ++  A    E L  
Sbjct: 164 IPTTRALCVIGADAPVRRETI-------ETAAVVTRLAPSFVRFGHFEHFA--ANEKLPE 214

Query: 182 VRRLADYAIRHHYP 223
           +R LAD+ I   YP
Sbjct: 215 LRALADFVIDRFYP 228

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>Y2107_BORBR (Q7WKJ9) UPF0061 protein BB2107|
          Length = 495

 Score = 52.0 bits (123), Expect = 4e-07
 Identities = 32/74 (43%), Positives = 44/74 (59%)
 Frame = +2

Query: 2   IPTTRALCLVETGKSVVRDMFYDGNAKEEPGAIVCRLAPSFLRFGSYQIHATRGKEDLEI 181
           IPTTR+L LV +   V+R+         E  A+V R+APSF+RFGS++  + R +   E 
Sbjct: 149 IPTTRSLALVVSDDPVMRETV-------ETAAVVTRMAPSFVRFGSFEHWSARRQP--EQ 199

Query: 182 VRRLADYAIRHHYP 223
           +R LADY I   YP
Sbjct: 200 LRVLADYVIDRFYP 213

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>Y1919_BORPA (Q7W954) UPF0061 protein BPP1919|
          Length = 495

 Score = 52.0 bits (123), Expect = 4e-07
 Identities = 32/74 (43%), Positives = 44/74 (59%)
 Frame = +2

Query: 2   IPTTRALCLVETGKSVVRDMFYDGNAKEEPGAIVCRLAPSFLRFGSYQIHATRGKEDLEI 181
           IPTTR+L LV +   V+R+         E  A+V R+APSF+RFGS++  + R +   E 
Sbjct: 149 IPTTRSLALVVSDDPVMRETV-------ETAAVVTRMAPSFVRFGSFEHWSARRQP--EQ 199

Query: 182 VRRLADYAIRHHYP 223
           +R LADY I   YP
Sbjct: 200 LRVLADYVIDRFYP 213

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>Y1999_CORGL (Q8NP26) UPF0061 protein Cgl1999/cg2190|
          Length = 474

 Score = 52.0 bits (123), Expect = 4e-07
 Identities = 27/76 (35%), Positives = 43/76 (56%)
 Frame = +2

Query: 2   IPTTRALCLVETGKSVVRDMFYDGNAKEEPGAIVCRLAPSFLRFGSYQIHATRGKEDLEI 181
           +PTTR+L ++ TG+ + R           PGA++ R+A S +R GS+Q     G   +E+
Sbjct: 147 VPTTRSLAVISTGRKIQR-------GSVAPGAVLVRVATSLIRVGSFQYSNISG--GIEL 197

Query: 182 VRRLADYAIRHHYPHL 229
            + LA+Y I  H+P L
Sbjct: 198 SQHLANYTITRHFPSL 213

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>Y1090_BORPE (Q7VZ47) UPF0061 protein BP1090|
          Length = 487

 Score = 52.0 bits (123), Expect = 4e-07
 Identities = 32/74 (43%), Positives = 44/74 (59%)
 Frame = +2

Query: 2   IPTTRALCLVETGKSVVRDMFYDGNAKEEPGAIVCRLAPSFLRFGSYQIHATRGKEDLEI 181
           IPTTR+L LV +   V+R+         E  A+V R+APSF+RFGS++  + R +   E 
Sbjct: 141 IPTTRSLALVVSDDPVMRETV-------ETAAVVTRMAPSFVRFGSFEHWSARRQP--EQ 191

Query: 182 VRRLADYAIRHHYP 223
           +R LADY I   YP
Sbjct: 192 LRVLADYVIDRFYP 205

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>Y330_SHEON (Q8EJX6) UPF0061 protein SO0330|
          Length = 484

 Score = 49.3 bits (116), Expect = 2e-06
 Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
 Frame = +2

Query: 2   IPTTRALCLVETGKSVVRDMFYDGNAKEEPGAIVCRLAPSFLRFGSYQI--HATRGKEDL 175
           +PTTRAL ++ +   V R+        +E  AI  RLA S +RFG ++   H+ RG+ D 
Sbjct: 138 VPTTRALAVIGSDMPVWRE-------SQETAAITVRLARSHIRFGHFEFFSHSERGQADK 190

Query: 176 EIVRRLADYAIRHHYPHL 229
             + +L ++ ++ HYPHL
Sbjct: 191 --LTQLLNFTLKQHYPHL 206

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>Y5028_PSESM (Q87VB1) UPF0061 protein PSPTO5028|
          Length = 487

 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
 Frame = +2

Query: 2   IPTTRALCLVETGKSVVRDMFYDGNAKEEPGAIVCRLAPSFLRFGSYQ-IHATRGKEDLE 178
           IP++RA C+V +   V R+       K+E  A+V RLA S +RFGS + +  T+  E L 
Sbjct: 148 IPSSRAACVVSSNTPVWRE-------KQEYAAMVLRLAQSHVRFGSLEYLFYTKQPEHL- 199

Query: 179 IVRRLADYAIRHHYPHLE 232
             + LA++ +  HYPH +
Sbjct: 200 --KTLAEHVLTMHYPHCQ 215

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>Y5023_PSEAE (Q9HUE6) UPF0061 protein PA5023|
          Length = 486

 Score = 44.7 bits (104), Expect = 6e-05
 Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
 Frame = +2

Query: 2   IPTTRALCLVETGKSVVRDMFYDGNAKEEPGAIVCRLAPSFLRFGSYQ-IHATRGKEDLE 178
           IP++RALC++ +   V R+       K+E  A + RLAPS +RFG ++  + TR  + L 
Sbjct: 148 IPSSRALCVIGSSTPVWRE-------KKESAATLLRLAPSHVRFGHFEYFYYTRQHDQL- 199

Query: 179 IVRRLADYAIRHHY 220
             ++LA + + HH+
Sbjct: 200 --KQLAAFVLEHHF 211

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>Y1633_SYNEL (Q8DIF6) UPF0061 protein tll1633|
          Length = 475

 Score = 44.7 bits (104), Expect = 6e-05
 Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 5/84 (5%)
 Frame = +2

Query: 2   IPTTRALCLVETGKSVVRDMFYDGNAKEEP----GAIVCRLAPSFLRFGSYQ-IHATRGK 166
           + T R+L LVETG+S+ R         +EP     +++ RL  S +RFG+++ +H  R  
Sbjct: 148 VRTFRSLSLVETGESLWRG--------DEPSPTRSSVLVRLGRSHIRFGTFERLHYLRRP 199

Query: 167 EDLEIVRRLADYAIRHHYPHLENI 238
              ++++RL D+ I ++YPHL  I
Sbjct: 200 ---DLIQRLLDHVIAYYYPHLLEI 220

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>YE35_SCHPO (O13890) UPF0061 protein C20G4.05c|
          Length = 568

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 24/69 (34%), Positives = 39/69 (56%)
 Frame = +2

Query: 2   IPTTRALCLVETGKSVVRDMFYDGNAKEEPGAIVCRLAPSFLRFGSYQIHATRGKEDLEI 181
           IPTT+AL +      V +          EP A+VCR+APS++R G++ +     +  +E 
Sbjct: 179 IPTTQALAISNLEGVVAQ------RETVEPCAVVCRMAPSWIRIGTFDLQGINNQ--IES 230

Query: 182 VRRLADYAI 208
           +R+LADY +
Sbjct: 231 LRKLADYCL 239

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>Y596_GLOVI (Q7NN18) UPF0061 protein gll0596|
          Length = 483

 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 27/97 (27%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
 Frame = +2

Query: 2   IPTTRALCLVETGKSVVRDMFYDGNAKEEPG----AIVCRLAPSFLRFGSYQ-IHATRGK 166
           + T+R+L L+ETG+++ R         +EP     A++ R + S +RFG+++ +H  + K
Sbjct: 158 VRTSRSLSLIETGEALWRG--------DEPSPTRSAVLVRTSRSHVRFGTFERLHHFKRK 209

Query: 167 EDLEIVRRLADYAIRHHYPHLENIKKSEGLSFEAAIG 277
           +   ++++L DY I  +YPH     +   L +   +G
Sbjct: 210 D---LIQKLLDYVIAVYYPHYGAEPERYALFYRELVG 243

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>YP222_YEAST (Q08968) UPF0061 protein YPL222w|
          Length = 688

 Score = 40.8 bits (94), Expect = 9e-04
 Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
 Frame = +2

Query: 2   IPTTRA--LCLVETGKSVVRDMFYDGNAKEEPGAIVCRLAPSFLRFGSYQIHATRGKEDL 175
           IP+TRA  L L+   K+  R+        +EP A+VCR APS++R G++ +   R + DL
Sbjct: 191 IPSTRAMQLTLLPGTKAQRRN--------QEPCAVVCRFAPSWIRLGNFNLF--RWRHDL 240

Query: 176 EIVRRLADYAI 208
           + + +L+DY I
Sbjct: 241 KGLIQLSDYCI 251

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>Y5068_PSEPK (Q88CW2) UPF0061 protein PP5068|
          Length = 486

 Score = 37.7 bits (86), Expect = 0.008
 Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
 Frame = +2

Query: 2   IPTTRALCLVETGKSVVRDMFYDGNAKEEPGAIVCRLAPSFLRFGSYQ-IHATRGKEDLE 178
           I T+RALC++ +   V R+         E  A++ RLA S +RFG ++  + T+  E   
Sbjct: 148 IATSRALCVIGSSTPVWRET-------RESAAMLTRLAQSHVRFGHFEYFYYTKQPEQQR 200

Query: 179 IVRRLADYAIRHHYP 223
           +   L D+ +  HYP
Sbjct: 201 V---LIDHVLEQHYP 212

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>Y1931_VIBCH (Q9KQR7) UPF0061 protein VC1931|
          Length = 489

 Score = 37.7 bits (86), Expect = 0.008
 Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
 Frame = +2

Query: 2   IPTTRALCLVETGKSVVRDMFYDGNAKEEPGAIVCRLAPSFLRFGSYQ-IHATRGKEDLE 178
           I TTRAL L+ +   V R+       +EE GA++ RLA + +RFG ++    T    +L+
Sbjct: 146 IATTRALALMSSETPVYRE-------REERGALLVRLAHTHVRFGHFEHFFYTDQHANLK 198

Query: 179 IVRRLADYAIRHHYPHLENIKKSEGLSFEAAI 274
           +   LAD  I  H+P      K     F   +
Sbjct: 199 L---LADKVIEWHFPDCVQTSKPYAAWFSQVV 227

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>Y2876_ANASP (Q8YT50) UPF0061 protein All2876|
          Length = 485

 Score = 37.4 bits (85), Expect = 0.010
 Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
 Frame = +2

Query: 2   IPTTRALCLVETGKSVVRDMFYDGNAKEEPG----AIVCRLAPSFLRFGSYQIHATRGKE 169
           + T+R L ++ETG  + R         +EP     +++ R+  S +RFG+++      + 
Sbjct: 158 VRTSRCLTMIETGLGLWRG--------DEPSPTRSSVMVRMNKSHIRFGTFERLHYFQRS 209

Query: 170 DLEIVRRLADYAIRHHYPHL 229
           DL  +++L D+ I H+Y HL
Sbjct: 210 DL--IKKLLDHVIEHYYRHL 227

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>YU61_VIBMA (Q9RA11) UPF0061 protein ORF18|
          Length = 557

 Score = 36.2 bits (82), Expect = 0.022
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
 Frame = +2

Query: 2   IPTTRALCL-VETGKSVVRDMFYDGNAKEEPG-------AIVCRLAPSFLRFGSYQIHAT 157
           +PT+R+L L V   ++V R  +  G+  E P        AI  R+APSF+R G  ++ A 
Sbjct: 158 VPTSRSLSLYVSKTETVKRPWYSQGSRSENPDMLISEAVAISTRVAPSFIRVGQLELFAR 217

Query: 158 RGKED 172
           R + +
Sbjct: 218 RSRSN 222

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>Y909_VIBPA (Q87R88) UPF0061 protein VP0909|
          Length = 489

 Score = 34.7 bits (78), Expect = 0.064
 Identities = 28/87 (32%), Positives = 43/87 (49%)
 Frame = +2

Query: 2   IPTTRALCLVETGKSVVRDMFYDGNAKEEPGAIVCRLAPSFLRFGSYQIHATRGKEDLEI 181
           IPTTRAL +V +   V R+       K E GA++ R+A + +RFG ++ H     + L  
Sbjct: 146 IPTTRALGMVVSDTPVYRE-------KTEFGAMLIRMAETHVRFGHFE-HLFYTNQ-LAE 196

Query: 182 VRRLADYAIRHHYPHLENIKKSEGLSF 262
            + LAD  I  H+    + +K     F
Sbjct: 197 QKLLADKVIEWHFADCASAEKPYAAMF 223

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>Y039_VIBVU (Q8DG12) UPF0061 protein VV1_0039|
          Length = 490

 Score = 31.2 bits (69), Expect = 0.70
 Identities = 27/91 (29%), Positives = 40/91 (43%)
 Frame = +2

Query: 2   IPTTRALCLVETGKSVVRDMFYDGNAKEEPGAIVCRLAPSFLRFGSYQIHATRGKEDLEI 181
           I TTRAL ++ +   V R+         E GA + RLA + +RFG ++       E  + 
Sbjct: 147 IETTRALGMMVSDTPVYREQV-------EQGACLIRLAQTHIRFGHFEHFFY--TEQYDE 197

Query: 182 VRRLADYAIRHHYPHLENIKKSEGLSFEAAI 274
           +R LAD  I  + P      K     FE  +
Sbjct: 198 LRLLADNVIEWYMPECTAHDKPYLAMFEQVV 228

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>Y1089_VIBVY (Q7MMI2) UPF0061 protein VV1089|
          Length = 490

 Score = 30.8 bits (68), Expect = 0.92
 Identities = 27/91 (29%), Positives = 39/91 (42%)
 Frame = +2

Query: 2   IPTTRALCLVETGKSVVRDMFYDGNAKEEPGAIVCRLAPSFLRFGSYQIHATRGKEDLEI 181
           I TTRAL +  +   V R+         E GA + RLA + +RFG ++       E  + 
Sbjct: 147 IETTRALGMTVSDTPVYREQV-------EQGACLIRLAQTHIRFGHFEHFFY--TEQYDE 197

Query: 182 VRRLADYAIRHHYPHLENIKKSEGLSFEAAI 274
           +R LAD  I  + P      K     FE  +
Sbjct: 198 LRLLADNVIEWYMPECTAHDKPYLAMFEQVV 228

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>YP93_CAEEL (Q09475) Putative helicase C28H8.3 (EC 3.6.1.-)|
          Length = 1714

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 27/104 (25%), Positives = 42/104 (40%), Gaps = 8/104 (7%)
 Frame = +2

Query: 2   IPTTRALCLVETGKSVVRDMF--YDGNAKEEPGAIVCRLAPSFLRFGSYQIHATRGKEDL 175
           +P TRALC+ E      R +F  + G  K+E                       R    +
Sbjct: 662 LPETRALCVYEIAVREGRTIFDQHQGTDKQE----------------------VRRNAAI 699

Query: 176 EIVRRLADYAIRHHYPHLENIKKSE------GLSFEAAIGDSPA 289
           ++V  L D  ++ H+ HLE+ +K +       L FEA  G  P+
Sbjct: 700 DLVGHLKDCFVK-HWDHLESKQKEQIVDLWVSLGFEAPAGSKPS 742

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>SNF1_CANGA (Q00372) Carbon catabolite derepressing protein kinase (EC|
           2.7.11.1)
          Length = 612

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
 Frame = +2

Query: 17  ALCLVETGKSVVRDMFYDGNAKEEPGAIVCRLAPSFLRFGSYQIHATRGKEDLEIVRRLA 196
           A  L++  KS+++DM  D N  +E    + +  P+F + G   + A+  ++     RRLA
Sbjct: 360 AYILIKDNKSLIKDMKQDNNVTQELDTFLSQSPPTFQQNGD-GMKASEDQKKKHSGRRLA 418

Query: 197 DYAIR----HHYPHLENIKKSE 250
               +    H  P ++  K+ +
Sbjct: 419 SSVTQQRTFHQPPFMDQSKEED 440

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>EFG_SYMTH (Q67JU0) Elongation factor G (EF-G)|
          Length = 694

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 19/51 (37%), Positives = 28/51 (54%)
 Frame = +2

Query: 125 LRFGSYQIHATRGKEDLEIVRRLADYAIRHHYPHLENIKKSEGLSFEAAIG 277
           L+ GSY ++AT+GK   E + RL    +R H  H E ++  E     AA+G
Sbjct: 334 LKSGSYVLNATKGKR--ERIGRL----VRMHANHREEVEVVETGDIAAAVG 378

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>YCND_BACSU (P94424) Hypothetical oxidoreductase ycnD (EC 1.-.-.-)|
          Length = 249

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +2

Query: 128 RFGSYQIHATRGKEDLEIVRRLADYAIRHHYPHLENIKKSEGLSFE 265
           +   Y    T GKE     + +A Y  R +YPH+  + + +G   E
Sbjct: 203 QMSEYMNKRTNGKETRNWSQSIASYYERLYYPHIREMLEKQGFKVE 248

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>P4HA1_CAEEL (Q10576) Prolyl 4-hydroxylase alpha-1 subunit precursor (EC|
           1.14.11.2) (4-PH alpha-1)
           (Procollagen-proline,2-oxoglutarate-4-dioxygenase
           alpha-1 subunit)
          Length = 559

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = +2

Query: 188 RLADYAIRHHY-PHLENIKKSEGLSFEA 268
           ++A+Y I  HY PH ++ KK E  SFE+
Sbjct: 409 QIANYGIGGHYDPHFDHAKKEESKSFES 436

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>GLGB_MYCPA (Q73X75) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Glycogen|
           branching enzyme) (BE)
           (1,4-alpha-D-glucan:1,4-alpha-D-glucan
           6-glucosyl-transferase)
          Length = 731

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
 Frame = +2

Query: 116 PSFLRFGSYQIHATRGKEDL---EIVRRLADYAIRHHYPHLENIKKSE 250
           P F    +Y++H    +  L   ++ R L DY + H + H+E +  +E
Sbjct: 250 PVFEPMSTYEVHLGSWRPGLSYRQLARELTDYVVEHGFTHVELLPVAE 297

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>YO01_BPL2 (P42536) Hypothetical 66.6 kDa protein (ORF1)|
          Length = 591

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
 Frame = +2

Query: 35  TGKSVVRDMFYDGNAKEEPGAIVCRLAPSFLRFGSYQIHATRGKED---LEIVRRLADYA 205
           T K    D+ YDGN+     A+V     SFL       + T+G +    L   + +  + 
Sbjct: 222 TTKLFNADVIYDGNSYPIRDAVVASNDDSFLTRTEKAYYFTQGGQKFLYLNFSKDIDSFM 281

Query: 206 IRHHYPHLEN 235
            ++HY  L+N
Sbjct: 282 FKNHYSELKN 291

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>SARDH_HUMAN (Q9UL12) Sarcosine dehydrogenase, mitochondrial precursor (EC|
           1.5.99.1) (SarDH) (BPR-2)
          Length = 918

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 19/62 (30%), Positives = 26/62 (41%)
 Frame = +2

Query: 59  MFYDGNAKEEPGAIVCRLAPSFLRFGSYQIHATRGKEDLEIVRRLADYAIRHHYPHLENI 238
           +F + +  E PG    R     L +  Y  + +R  ED    R LAD       PH + I
Sbjct: 498 VFQERHGWERPGWFHPRGPAPVLEYDYYGAYGSRAHEDYAYRRLLADEYTFAFPPHHDTI 557

Query: 239 KK 244
           KK
Sbjct: 558 KK 559

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>GLGB_CHLCV (Q823Y5) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Glycogen|
           branching enzyme) (BE)
           (1,4-alpha-D-glucan:1,4-alpha-D-glucan
           6-glucosyl-transferase)
          Length = 719

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 19/59 (32%), Positives = 28/59 (47%)
 Frame = +2

Query: 74  NAKEEPGAIVCRLAPSFLRFGSYQIHATRGKEDLEIVRRLADYAIRHHYPHLENIKKSE 250
           N K++P AI        +  GS+Q    R     E+ +RLA Y    HY H+E +  +E
Sbjct: 234 NTKDQPLAIY------EVHVGSWQWDNGRPLGYRELAKRLAQYCKELHYTHVELLPITE 286


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,544,427
Number of Sequences: 219361
Number of extensions: 776552
Number of successful extensions: 1776
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 1716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1738
length of database: 80,573,946
effective HSP length: 73
effective length of database: 64,560,593
effective search space used: 1549454232
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result