| Clone Name | basd27a23 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 942 bits (475), Expect = 0.0 Identities = 477/478 (99%) Strand = Plus / Minus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 119458 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcg 119399 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119398 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 119339 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119338 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 119279 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119278 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 119219 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119218 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 119159 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119158 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 119099 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119098 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 119039 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119038 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 118981 Score = 942 bits (475), Expect = 0.0 Identities = 477/478 (99%) Strand = Plus / Plus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 95436 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcg 95495 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95496 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 95555 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95556 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 95615 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95616 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 95675 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95676 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 95735 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95736 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 95795 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95796 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 95855 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95856 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 95913
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 934 bits (471), Expect = 0.0 Identities = 476/478 (99%) Strand = Plus / Minus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 118239 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 118180 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118179 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 118120 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118119 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 118060 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118059 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 118000 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117999 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 117940 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117939 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 117880 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117879 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 117820 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117819 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 117762
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 934 bits (471), Expect = 0.0 Identities = 476/478 (99%) Strand = Plus / Minus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 119323 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 119264 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119263 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 119204 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119203 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 119144 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119143 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 119084 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119083 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 119024 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119023 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 118964 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118963 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 118904 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118903 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 118846 Score = 934 bits (471), Expect = 0.0 Identities = 476/478 (99%) Strand = Plus / Plus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 95833 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 95892 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95893 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 95952 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95953 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 96012 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96013 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 96072 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96073 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 96132 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96133 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 96192 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96193 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 96252 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96253 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 96310
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 934 bits (471), Expect = 0.0 Identities = 476/478 (99%) Strand = Plus / Minus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 119323 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 119264 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119263 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 119204 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119203 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 119144 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119143 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 119084 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119083 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 119024 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119023 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 118964 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118963 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 118904 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118903 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 118846 Score = 934 bits (471), Expect = 0.0 Identities = 476/478 (99%) Strand = Plus / Plus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 95833 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 95892 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95893 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 95952 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95953 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 96012 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96013 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 96072 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96073 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 96132 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96133 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 96192 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96193 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 96252 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96253 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 96310
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 934 bits (471), Expect = 0.0 Identities = 476/478 (99%) Strand = Plus / Minus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 119272 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 119213 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119212 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 119153 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119152 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 119093 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119092 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 119033 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119032 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 118973 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118972 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 118913 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118912 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 118853 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118852 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 118795 Score = 934 bits (471), Expect = 0.0 Identities = 476/478 (99%) Strand = Plus / Plus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 95778 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 95837 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95838 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 95897 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95898 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 95957 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95958 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 96017 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96018 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 96077 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96078 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 96137 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96138 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 96197 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96198 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 96255
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 934 bits (471), Expect = 0.0 Identities = 476/478 (99%) Strand = Plus / Plus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 31508411 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 31508470 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508471 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 31508530 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508531 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 31508590 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508591 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 31508650 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508651 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 31508710 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508711 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 31508770 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508771 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 31508830 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508831 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 31508888 Score = 206 bits (104), Expect = 5e-50 Identities = 104/104 (100%) Strand = Plus / Minus Query: 375 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513317 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11513258 Query: 435 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513257 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 11513214 Score = 133 bits (67), Expect = 6e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 391 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 450 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25722178 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25722119 Query: 451 taaaggaggtggggg 465 ||||||||||||||| Sbjct: 25722118 taaaggaggtggggg 25722104 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 394 gtcgagagggaaacagcccggatcaccagctaaggccc 431 |||||||||||||||||||||||||||||||||||||| Sbjct: 28582253 gtcgagagggaaacagcccggatcaccagctaaggccc 28582290 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 293 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 347 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 35945442 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 35945496
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 934 bits (471), Expect = 0.0 Identities = 476/478 (99%) Strand = Plus / Minus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 84185 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 84126 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84125 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 84066 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84065 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 84006 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84005 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 83946 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83945 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 83886 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83885 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 83826 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83825 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 83766 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83765 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 83708
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 934 bits (471), Expect = 0.0 Identities = 476/478 (99%) Strand = Plus / Minus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 119292 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 119233 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119232 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 119173 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119172 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 119113 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119112 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 119053 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119052 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 118993 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118992 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 118933 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118932 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 118873 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118872 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 118815 Score = 934 bits (471), Expect = 0.0 Identities = 476/478 (99%) Strand = Plus / Plus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 95826 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 95885 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95886 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 95945 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95946 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 96005 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96006 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 96065 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96066 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 96125 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96126 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 96185 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96186 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 96245 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96246 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 96303
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 934 bits (471), Expect = 0.0 Identities = 476/478 (99%) Strand = Plus / Plus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 14600 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 14659 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14660 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 14719 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14720 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 14779 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14780 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 14839 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14840 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 14899 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14900 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 14959 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14960 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 15019 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15020 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 15077 Score = 910 bits (459), Expect = 0.0 Identities = 474/478 (99%), Gaps = 1/478 (0%) Strand = Plus / Plus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 122875 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 122934 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 122935 attgtcactgcttatggacccgaac-taggtgatctatccatgaccaggatgaagcttgg 122993 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122994 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 123053 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123054 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 123113 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123114 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 123173 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123174 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 123233 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123234 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 123293 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123294 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 123351
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 934 bits (471), Expect = 0.0 Identities = 476/478 (99%) Strand = Plus / Plus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 141408 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 141467 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141468 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 141527 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141528 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 141587 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141588 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 141647 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141648 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 141707 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141708 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 141767 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141768 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 141827 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141828 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 141885
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 934 bits (471), Expect = 0.0 Identities = 476/478 (99%) Strand = Plus / Plus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 94004 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 94063 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94064 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 94123 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94124 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 94183 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94184 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 94243 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94244 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 94303 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94304 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 94363 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94364 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 94423 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94424 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 94481
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 934 bits (471), Expect = 0.0 Identities = 476/478 (99%) Strand = Plus / Minus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 58011 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 57952 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57951 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 57892 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57891 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 57832 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57831 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 57772 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57771 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 57712 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57711 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 57652 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57651 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 57592 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57591 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 57534
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 934 bits (471), Expect = 0.0 Identities = 476/478 (99%) Strand = Plus / Plus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 28068 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 28127 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28128 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 28187 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28188 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 28247 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28248 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 28307 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28308 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 28367 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28368 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 28427 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28428 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 28487 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28488 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 28545
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 934 bits (471), Expect = 0.0 Identities = 476/478 (99%) Strand = Plus / Plus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 9268760 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 9268819 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268820 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 9268879 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268880 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 9268939 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268940 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 9268999 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269000 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 9269059 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269060 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 9269119 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269120 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 9269179 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269180 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 9269237 Score = 934 bits (471), Expect = 0.0 Identities = 476/478 (99%) Strand = Plus / Plus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 9056674 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 9056733 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056734 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 9056793 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056794 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 9056853 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056854 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 9056913 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056914 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 9056973 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056974 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 9057033 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057034 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 9057093 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057094 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 9057151 Score = 926 bits (467), Expect = 0.0 Identities = 475/478 (99%) Strand = Plus / Plus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 9228260 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 9228319 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9228320 attgtcactgcttatggacccgaacctaggtgatctatccatgaccaggatgaagcttgg 9228379 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228380 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 9228439 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228440 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 9228499 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228500 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 9228559 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228560 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 9228619 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228620 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 9228679 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228680 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 9228737 Score = 910 bits (459), Expect = 0.0 Identities = 474/478 (99%), Gaps = 1/478 (0%) Strand = Plus / Plus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 9164849 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 9164908 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 9164909 attgtcactgcttatggacccgaac-taggtgatctatccatgaccaggatgaagcttgg 9164967 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164968 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 9165027 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165028 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 9165087 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165088 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 9165147 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165148 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 9165207 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165208 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 9165267 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165268 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 9165325
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 934 bits (471), Expect = 0.0 Identities = 476/478 (99%) Strand = Plus / Plus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 19938745 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 19938804 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938805 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 19938864 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938865 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 19938924 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938925 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 19938984 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938985 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 19939044 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939045 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 19939104 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939105 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 19939164 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939165 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 19939222 Score = 934 bits (471), Expect = 0.0 Identities = 476/478 (99%) Strand = Plus / Plus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 10387612 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 10387671 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387672 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 10387731 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387732 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 10387791 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387792 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 10387851 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387852 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 10387911 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387912 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 10387971 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387972 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 10388031 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388032 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 10388089 Score = 934 bits (471), Expect = 0.0 Identities = 476/478 (99%) Strand = Plus / Minus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 10276686 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 10276627 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276626 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 10276567 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276566 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 10276507 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276506 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 10276447 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276446 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 10276387 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276386 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 10276327 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276326 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 10276267 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276266 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 10276209 Score = 54.0 bits (27), Expect = 4e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 300 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 359 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781053 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781109 Query: 360 tcggccagtgagacgatgggggataagcttcatcgtcgagag 401 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781110 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781151
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 934 bits (471), Expect = 0.0 Identities = 476/478 (99%) Strand = Plus / Plus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 31598927 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 31598986 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598987 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 31599046 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599047 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 31599106 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599107 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 31599166 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599167 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 31599226 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599227 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 31599286 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599287 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 31599346 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599347 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 31599404 Score = 206 bits (104), Expect = 5e-50 Identities = 104/104 (100%) Strand = Plus / Minus Query: 375 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510080 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11510021 Query: 435 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510020 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 11509977 Score = 133 bits (67), Expect = 6e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 391 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 450 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25813487 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25813428 Query: 451 taaaggaggtggggg 465 ||||||||||||||| Sbjct: 25813427 taaaggaggtggggg 25813413 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 394 gtcgagagggaaacagcccggatcaccagctaaggccc 431 |||||||||||||||||||||||||||||||||||||| Sbjct: 28673577 gtcgagagggaaacagcccggatcaccagctaaggccc 28673614 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 293 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 347 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 36035516 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 36035570
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 934 bits (471), Expect = 0.0 Identities = 476/478 (99%) Strand = Plus / Plus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 33526243 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 33526302 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526303 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 33526362 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526363 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 33526422 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526423 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 33526482 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526483 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 33526542 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526543 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 33526602 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526603 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 33526662 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526663 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 33526720 Score = 165 bits (83), Expect = 2e-37 Identities = 89/91 (97%) Strand = Plus / Plus Query: 384 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 443 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 527751 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 527810 Query: 444 tcagtgataaaggaggtgggggtgcaaagac 474 ||||||||||||||||||||||||||||||| Sbjct: 527811 tcagtgataaaggaggtgggggtgcaaagac 527841 Score = 65.9 bits (33), Expect = 1e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 1 ggcttggttaagggaacggaacccaccggngccgta 36 ||||||||||||||||||||||||||||| |||||| Sbjct: 16677961 ggcttggttaagggaacggaacccaccggagccgta 16677926
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 934 bits (471), Expect = 0.0 Identities = 476/478 (99%) Strand = Plus / Minus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 47298 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 47239 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47238 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 47179 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47178 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 47119 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47118 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 47059 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47058 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 46999 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46998 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 46939 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46938 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 46879 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46878 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 46821
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 934 bits (471), Expect = 0.0 Identities = 476/478 (99%) Strand = Plus / Plus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 71440 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 71499 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71500 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 71559 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71560 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 71619 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71620 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 71679 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71680 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 71739 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71740 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 71799 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71800 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 71859 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71860 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 71917
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 934 bits (471), Expect = 0.0 Identities = 476/478 (99%) Strand = Plus / Plus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 212 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 271 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 272 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 331 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 332 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 391 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 392 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 451 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 452 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 511 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 512 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 571 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 572 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 631 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 632 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 689
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 934 bits (471), Expect = 0.0 Identities = 476/478 (99%) Strand = Plus / Plus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 407 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 466 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 467 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 526 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 527 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 586 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 587 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 646 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 647 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 706 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 707 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 766 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 767 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 826 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 827 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 884
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 934 bits (471), Expect = 0.0 Identities = 476/478 (99%) Strand = Plus / Plus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 278 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 337 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 338 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 397 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 398 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 457 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 458 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 517 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 518 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 577 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 578 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 637 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 638 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 697 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 698 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 755
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 934 bits (471), Expect = 0.0 Identities = 476/478 (99%) Strand = Plus / Plus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 409 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 468 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 469 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 528 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 529 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 588 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 589 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 648 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 649 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 708 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 709 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 768 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 769 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 828 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 829 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 886
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 934 bits (471), Expect = 0.0 Identities = 476/478 (99%) Strand = Plus / Plus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 28 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 87 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 147 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 207 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 267 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 268 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 327 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 328 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 387 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 447 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 448 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 505
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 934 bits (471), Expect = 0.0 Identities = 476/478 (99%) Strand = Plus / Plus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 228 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 287 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 288 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 347 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 348 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 407 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 408 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 467 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 468 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 527 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 528 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 587 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 588 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 647 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 648 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 705
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 934 bits (471), Expect = 0.0 Identities = 476/478 (99%) Strand = Plus / Plus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 407 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 466 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 467 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 526 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 527 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 586 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 587 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 646 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 647 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 706 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 707 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 766 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 767 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 826 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 827 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 884
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 934 bits (471), Expect = 0.0 Identities = 476/478 (99%) Strand = Plus / Plus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 409 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 468 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 469 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 528 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 529 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 588 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 589 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 648 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 649 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 708 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 709 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 768 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 769 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 828 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 829 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 886
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 934 bits (471), Expect = 0.0 Identities = 476/478 (99%) Strand = Plus / Plus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 30 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 89 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 149 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 209 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 210 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 269 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 270 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 329 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 330 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 389 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 390 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 449 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 450 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 507
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 934 bits (471), Expect = 0.0 Identities = 476/478 (99%) Strand = Plus / Plus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 19950021 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 19950080 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950081 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 19950140 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950141 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 19950200 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950201 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 19950260 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950261 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 19950320 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950321 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 19950380 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950381 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 19950440 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950441 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 19950498 Score = 934 bits (471), Expect = 0.0 Identities = 476/478 (99%) Strand = Plus / Plus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 10393651 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 10393710 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393711 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 10393770 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393771 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 10393830 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393831 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 10393890 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393891 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 10393950 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393951 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 10394010 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394011 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 10394070 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394071 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 10394128 Score = 934 bits (471), Expect = 0.0 Identities = 476/478 (99%) Strand = Plus / Minus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 10282725 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 10282666 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282665 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 10282606 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282605 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 10282546 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282545 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 10282486 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282485 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 10282426 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282425 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 10282366 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282365 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 10282306 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282305 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 10282248 Score = 54.0 bits (27), Expect = 4e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 300 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 359 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781050 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781106 Query: 360 tcggccagtgagacgatgggggataagcttcatcgtcgagag 401 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781107 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781148
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 934 bits (471), Expect = 0.0 Identities = 476/478 (99%) Strand = Plus / Minus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 119266 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 119207 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119206 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 119147 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119146 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 119087 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119086 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 119027 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119026 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 118967 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118966 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 118907 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118906 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 118847 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118846 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 118789 Score = 934 bits (471), Expect = 0.0 Identities = 476/478 (99%) Strand = Plus / Plus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 95773 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 95832 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95833 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 95892 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95893 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 95952 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95953 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 96012 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96013 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 96072 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96073 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 96132 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96133 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 96192 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96193 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 96250
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 926 bits (467), Expect = 0.0 Identities = 475/478 (99%) Strand = Plus / Plus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 |||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 20835 ggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 20894 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20895 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 20954 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20955 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 21014 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21015 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 21074 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21075 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 21134 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21135 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 21194 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21195 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 21254 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21255 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 21312 Score = 888 bits (448), Expect = 0.0 Identities = 472/479 (98%), Gaps = 1/479 (0%) Strand = Plus / Minus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 |||||||||||||||| ||||||| |||| ||||||| ||||||||||||| |||||||| Sbjct: 44283 ggcttggttaagggaatggaaccctccggagccgtagtgaaagcgagtcttcatagggcg 44224 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44223 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 44164 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44163 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 44104 Query: 181 taggggtg-aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 239 |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 44103 taggggtgtaaatgccactcgaacccagagctagttggttctccccgaaatgcgttgagg 44044 Query: 240 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44043 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 43984 Query: 300 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43983 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 43924 Query: 360 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43923 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 43864 Query: 420 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43863 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 43805
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 926 bits (467), Expect = 0.0 Identities = 475/478 (99%) Strand = Plus / Minus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 |||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 912 ggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 853 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 852 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 793 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 792 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 733 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 732 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 673 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 672 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 613 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 612 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 553 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 552 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 493 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 492 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 435
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 926 bits (467), Expect = 0.0 Identities = 475/478 (99%) Strand = Plus / Minus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 9241521 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 9241462 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241461 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 9241402 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 9241401 atgaaactaagcagaggtccgaaccgtctgatgttgaagaatcagcggatgagttgtggt 9241342 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241341 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 9241282 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241281 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 9241222 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241221 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 9241162 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241161 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 9241102 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241101 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 9241044 Score = 188 bits (95), Expect = 1e-44 Identities = 151/167 (90%), Gaps = 2/167 (1%) Strand = Plus / Minus Query: 265 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 324 |||||||||| |||| |||||||| ||| ||||||| ||||||||||| ||||||||||| Sbjct: 3580549 ggtaaagcaccgtttaggtgcgggttgcacgagcggcaccaaatcgagacaaactctgaa 3580490 Query: 325 tactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggata 384 ||||||||||||||||||| |||||||||||| | |||| ||||||||||||||||||| Sbjct: 3580489 tactagatatgacccaaaagtaacaggggtcatgatcgg-tagtgagacgatgggggata 3580431 Query: 385 agcttcatcgtcgagagggaaac-agcccggatcaccagctaaggcc 430 ||||||||||||||||| ||||| | ||| |||||||||||||||| Sbjct: 3580430 agcttcatcgtcgagagagaaacaaccccaaatcaccagctaaggcc 3580384 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 419 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg 465 ||||||||| || ||||||||||||| ||| ||||| |||||||||| Sbjct: 3580385 ccagctaagaccactaaatgaccgcttagttataaatgaggtggggg 3580339 Score = 40.1 bits (20), Expect = 6.5 Identities = 35/40 (87%) Strand = Plus / Minus Query: 418 accagctaaggcccctaaatgaccgctcagtgataaagga 457 ||||| |||||| ||||||||||||||| |||| ||||| Sbjct: 3319509 accagataaggcttctaaatgaccgctcaatgatgaagga 3319470
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 926 bits (467), Expect = 0.0 Identities = 475/478 (99%) Strand = Plus / Minus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 |||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 123122 ggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 123063 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123062 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 123003 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123002 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 122943 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122942 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 122883 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122882 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 122823 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122822 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 122763 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122762 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 122703 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122702 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 122645 Score = 926 bits (467), Expect = 0.0 Identities = 475/478 (99%) Strand = Plus / Plus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 |||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 99715 ggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 99774 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99775 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 99834 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99835 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 99894 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99895 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 99954 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99955 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 100014 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100015 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 100074 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100075 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 100134 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100135 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 100192
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 926 bits (467), Expect = 0.0 Identities = 475/478 (99%) Strand = Plus / Minus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 52734 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 52675 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52674 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 52615 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 52614 atgaaactaagcagaggtccgaaccgtctgatgttgaagaatcagcggatgagttgtggt 52555 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52554 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 52495 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52494 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 52435 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52434 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 52375 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52374 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 52315 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52314 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 52257
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 926 bits (467), Expect = 0.0 Identities = 475/478 (99%) Strand = Plus / Minus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 |||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 123839 ggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 123780 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123779 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 123720 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123719 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 123660 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123659 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 123600 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123599 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 123540 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123539 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 123480 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123479 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 123420 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123419 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 123362 Score = 926 bits (467), Expect = 0.0 Identities = 475/478 (99%) Strand = Plus / Plus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 |||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 100392 ggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 100451 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100452 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 100511 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100512 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 100571 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100572 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 100631 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100632 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 100691 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100692 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 100751 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100752 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 100811 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100812 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 100869
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 918 bits (463), Expect = 0.0 Identities = 474/478 (99%) Strand = Plus / Plus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 406 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 465 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 466 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 525 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 526 atgaaaccaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 585 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 586 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 645 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 646 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 705 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 706 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 765 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 766 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 825 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 826 agctaaggcccctaaatgaccgctcagtgatagaggaggtgggggtgcaaagacagcc 883
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 902 bits (455), Expect = 0.0 Identities = 473/478 (98%), Gaps = 1/478 (0%) Strand = Plus / Minus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 |||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 123062 ggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 123003 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123002 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 122943 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122942 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 122883 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122882 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 122823 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 122822 gcagcagttgactggacatctaggggtaaagcactgtttcggtgc-ggctgcgcgagcgg 122764 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122763 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 122704 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122703 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 122644 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122643 agctaaggccccttaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 122586 Score = 902 bits (455), Expect = 0.0 Identities = 473/478 (98%), Gaps = 1/478 (0%) Strand = Plus / Plus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 |||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 99675 ggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 99734 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99735 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 99794 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99795 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 99854 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99855 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 99914 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 99915 gcagcagttgactggacatctaggggtaaagcactgtttcggtgc-ggctgcgcgagcgg 99973 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99974 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 100033 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100034 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 100093 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100094 agctaaggccccttaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 100151
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 902 bits (455), Expect = 0.0 Identities = 473/478 (98%), Gaps = 1/478 (0%) Strand = Plus / Plus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 |||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 6028 ggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 6087 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6088 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 6147 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6148 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 6207 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6208 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 6267 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 6268 gcagcagttgactggacatctaggggtaaagcactgtttcggtgc-ggctgcgcgagcgg 6326 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6327 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 6386 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6387 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 6446 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6447 agctaaggccccttaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 6504
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 902 bits (455), Expect = 0.0 Identities = 463/466 (99%) Strand = Plus / Plus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 519 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 578 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 579 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 638 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 639 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 698 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 699 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 758 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 759 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 818 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 819 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 878 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 879 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 938 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggt 466 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 939 agctaaggcccctaaatgaccgctcagtgataaaggaggtaggggt 984
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 902 bits (455), Expect = 0.0 Identities = 473/478 (98%), Gaps = 1/478 (0%) Strand = Plus / Plus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 |||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 616 ggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 675 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 676 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 735 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 736 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 795 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 796 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 855 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 856 gcagcagttgactggacatctaggggtaaagcactgtttcggtgc-ggctgcgcgagcgg 914 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 915 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 974 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 975 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 1034 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1035 agctaaggccccttaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 1092
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 870 bits (439), Expect = 0.0 Identities = 468/478 (97%) Strand = Plus / Minus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 122602 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 122543 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122542 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 122483 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 122482 atgaaactaagcagaggttcgaaccgactgatgttgaagaatcagcggatgagttgtggt 122423 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122422 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 122363 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122362 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 122303 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||| |||||||||||||||||||||||||||||||||||||| ||| |||| || Sbjct: 122302 taccaaattgaggcaaactctgaatactagatatgacccaaaaataataggattcaaagt 122243 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 122242 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcctggatcacc 122183 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 122182 agctaaggcccctaaatgaccgctcaatgataaaggaggtgggggtgcaaagacagcc 122125
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 870 bits (439), Expect = 0.0 Identities = 468/478 (97%) Strand = Plus / Minus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 12825143 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 12825084 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825083 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 12825024 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825023 atgaaactaagcagaggttcgaaccgactgatgttgaagaatcagcggatgagttgtggt 12824964 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824963 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 12824904 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824903 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 12824844 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||| |||||||||||||||||||||||||||||||||||||| ||| |||| || Sbjct: 12824843 taccaaattgaggcaaactctgaatactagatatgacccaaaaataataggattcaaagt 12824784 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 12824783 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcctggatcacc 12824724 Query: 421 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 12824723 agctaaggcccctaaatgaccgctcaatgataaaggaggtgggggtgcaaagacagcc 12824666
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 868 bits (438), Expect = 0.0 Identities = 443/445 (99%) Strand = Plus / Plus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 404 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 463 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 464 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 523 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 524 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 583 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 584 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 643 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 644 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 703 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 704 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 763 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 764 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 823 Query: 421 agctaaggcccctaaatgaccgctc 445 ||||||||||||||||||||||||| Sbjct: 824 agctaaggcccctaaatgaccgctc 848
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 841 bits (424), Expect = 0.0 Identities = 429/431 (99%) Strand = Plus / Plus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 612 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 671 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 672 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 731 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 732 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 791 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 792 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 851 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 852 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 911 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 912 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 971 Query: 361 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 972 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 1031 Query: 421 agctaaggccc 431 ||||||||||| Sbjct: 1032 agctaaggccc 1042
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 821 bits (414), Expect = 0.0 Identities = 449/461 (97%) Strand = Plus / Minus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 131046 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 130987 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 130986 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 130927 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130926 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 130867 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130866 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 130807 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 130806 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 130747 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 130746 ctctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatg 130687 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130686 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 130627 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 130626 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 130586 Score = 821 bits (414), Expect = 0.0 Identities = 449/461 (97%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 103589 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 103648 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 103649 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 103708 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103709 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 103768 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103769 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 103828 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 103829 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 103888 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 103889 ctctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatg 103948 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103949 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 104008 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 104009 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 104049
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 821 bits (414), Expect = 0.0 Identities = 449/461 (97%) Strand = Plus / Minus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 141486 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 141427 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 141426 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 141367 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141366 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 141307 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141306 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 141247 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 141246 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 141187 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 141186 ctctgaatactagatatgaccccaaaataacaggggtaaaggtcggccagtgagacgatg 141127 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141126 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 141067 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 141066 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 141026 Score = 821 bits (414), Expect = 0.0 Identities = 449/461 (97%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 112171 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 112230 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 112231 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 112290 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112291 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 112350 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112351 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 112410 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 112411 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 112470 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 112471 ctctgaatactagatatgaccccaaaataacaggggtaaaggtcggccagtgagacgatg 112530 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112531 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 112590 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 112591 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 112631
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 821 bits (414), Expect = 0.0 Identities = 449/461 (97%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 618 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 677 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 678 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 737 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 738 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 797 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 798 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 857 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 858 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 917 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 918 ctctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgagacgatg 977 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 978 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 1037 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1038 gaccgctcagtgataaaggaggtaggggtgcaaagacagcc 1078
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 821 bits (414), Expect = 0.0 Identities = 449/461 (97%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 622 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 681 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 682 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 741 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 742 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 801 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 802 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 861 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 862 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 921 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 922 ctctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatg 981 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 982 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 1041 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 1042 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 1082
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 813 bits (410), Expect = 0.0 Identities = 448/461 (97%) Strand = Plus / Minus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 138883 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 138824 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 138823 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 138764 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138763 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 138704 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138703 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 138644 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 138643 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 138584 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| Sbjct: 138583 ctctgaatactagatatgacctcaaaataacaggggtcgaggtcggccagtgagacgatg 138524 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138523 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 138464 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 138463 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 138423 Score = 813 bits (410), Expect = 0.0 Identities = 448/461 (97%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 110214 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 110273 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 110274 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 110333 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110334 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 110393 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110394 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 110453 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 110454 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 110513 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| Sbjct: 110514 ctctgaatactagatatgacctcaaaataacaggggtcgaggtcggccagtgagacgatg 110573 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110574 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 110633 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 110634 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 110674
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 813 bits (410), Expect = 0.0 Identities = 448/461 (97%) Strand = Plus / Minus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 132154 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 132095 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 132094 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 132035 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132034 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 131975 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131974 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 131915 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 131914 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 131855 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 131854 ctctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatg 131795 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131794 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 131735 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 || |||||||||||||||||||| |||||||| |||||||| Sbjct: 131734 gatcgctcagtgataaaggaggtaggggtgcagagacagcc 131694 Score = 813 bits (410), Expect = 0.0 Identities = 448/461 (97%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 104724 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 104783 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 104784 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 104843 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104844 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 104903 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104904 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 104963 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 104964 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 105023 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 105024 ctctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatg 105083 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105084 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 105143 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 || |||||||||||||||||||| |||||||| |||||||| Sbjct: 105144 gatcgctcagtgataaaggaggtaggggtgcagagacagcc 105184
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 813 bits (410), Expect = 0.0 Identities = 448/461 (97%) Strand = Plus / Minus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 131170 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 131111 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 131110 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 131051 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131050 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 130991 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130990 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 130931 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 130930 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 130871 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 130870 ctctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacgatg 130811 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130810 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 130751 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 130750 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 130710 Score = 813 bits (410), Expect = 0.0 Identities = 448/461 (97%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 102275 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 102334 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 102335 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 102394 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102395 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 102454 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102455 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 102514 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 102515 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 102574 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 102575 ctctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacgatg 102634 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102635 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 102694 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 102695 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 102735
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 813 bits (410), Expect = 0.0 Identities = 448/461 (97%) Strand = Plus / Minus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 136317 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 136258 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 136257 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 136198 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136197 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 136138 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136137 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 136078 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 136077 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 136018 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 136017 ctctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatg 135958 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135957 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 135898 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 135897 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 135857 Score = 813 bits (410), Expect = 0.0 Identities = 448/461 (97%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 107240 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 107299 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 107300 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 107359 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107360 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 107419 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107420 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 107479 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 107480 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 107539 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 107540 ctctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatg 107599 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107600 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 107659 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 107660 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 107700
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 813 bits (410), Expect = 0.0 Identities = 448/461 (97%) Strand = Plus / Minus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 142258 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 142199 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 142198 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcggagg 142139 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 142079 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 142078 tcgaacccagagctagctcgttctccccgaaatgcgttgaggcgcagcagttgactggac 142019 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 142018 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 141959 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 141958 ctctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatg 141899 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141898 ggggataagcttgatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 141839 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 || |||||||||||||||||||| ||||||||||||||||| Sbjct: 141838 gatcgctcagtgataaaggaggtaggggtgcaaagacagcc 141798 Score = 813 bits (410), Expect = 0.0 Identities = 448/461 (97%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 111070 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 111129 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 111130 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcggagg 111189 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111190 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 111249 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 111250 tcgaacccagagctagctcgttctccccgaaatgcgttgaggcgcagcagttgactggac 111309 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 111310 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 111369 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 111370 ctctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatg 111429 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111430 ggggataagcttgatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 111489 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 || |||||||||||||||||||| ||||||||||||||||| Sbjct: 111490 gatcgctcagtgataaaggaggtaggggtgcaaagacagcc 111530
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 813 bits (410), Expect = 0.0 Identities = 448/461 (97%) Strand = Plus / Minus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 134925 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 134866 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 134865 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 134806 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134805 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 134746 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134745 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 134686 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 134685 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 134626 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 134625 ctctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatg 134566 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134565 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 134506 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 134505 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 134465 Score = 813 bits (410), Expect = 0.0 Identities = 448/461 (97%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 106111 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 106170 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 106171 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 106230 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106231 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 106290 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106291 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 106350 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 106351 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 106410 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 106411 ctctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatg 106470 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106471 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 106530 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 106531 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 106571
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 813 bits (410), Expect = 0.0 Identities = 448/461 (97%) Strand = Plus / Minus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 135971 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 135912 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 135911 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 135852 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135851 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 135792 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135791 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 135732 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 135731 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 135672 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 135671 ctctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatg 135612 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135611 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 135552 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 135551 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 135511 Score = 813 bits (410), Expect = 0.0 Identities = 448/461 (97%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 106454 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 106513 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 106514 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 106573 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106574 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 106633 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106634 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 106693 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 106694 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 106753 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 106754 ctctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatg 106813 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106814 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 106873 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 106874 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 106914
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 813 bits (410), Expect = 0.0 Identities = 448/461 (97%) Strand = Plus / Minus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 135060 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 135001 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 135000 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 134941 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134940 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 134881 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134880 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 134821 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 134820 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 134761 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 134760 ctctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatg 134701 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134700 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 134641 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 134640 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 134600 Score = 813 bits (410), Expect = 0.0 Identities = 448/461 (97%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 106283 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 106342 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 106343 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 106402 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106403 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 106462 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106463 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 106522 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 106523 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 106582 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 106583 ctctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatg 106642 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106643 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 106702 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 106703 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 106743
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 813 bits (410), Expect = 0.0 Identities = 448/461 (97%) Strand = Plus / Minus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 135058 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 134999 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 134998 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 134939 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134938 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 134879 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134878 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 134819 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 134818 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 134759 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 134758 ctctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatg 134699 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134698 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 134639 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 134638 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 134598 Score = 813 bits (410), Expect = 0.0 Identities = 448/461 (97%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 106280 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 106339 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 106340 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 106399 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106400 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 106459 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106460 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 106519 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 106520 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 106579 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 106580 ctctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatg 106639 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106640 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 106699 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 106700 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 106740
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 813 bits (410), Expect = 0.0 Identities = 448/461 (97%) Strand = Plus / Minus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 134970 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 134911 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 134910 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 134851 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134850 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 134791 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134790 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 134731 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 134730 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 134671 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 134670 ctctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatg 134611 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134610 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 134551 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 134550 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 134510 Score = 813 bits (410), Expect = 0.0 Identities = 448/461 (97%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 106158 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 106217 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 106218 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 106277 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106278 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 106337 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106338 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 106397 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 106398 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 106457 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 106458 ctctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatg 106517 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106518 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 106577 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 106578 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 106618
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 813 bits (410), Expect = 0.0 Identities = 449/461 (97%), Gaps = 1/461 (0%) Strand = Plus / Minus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 133601 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatgg 133542 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 133541 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 133482 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133481 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 133422 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 133421 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactagac 133362 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 133361 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 133302 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 133301 ctctgaatactagatatgacccaaaaatcaca-gggtcaaggtcggccagtgagacgatg 133243 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133242 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 133183 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 133182 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 133142 Score = 813 bits (410), Expect = 0.0 Identities = 449/461 (97%), Gaps = 1/461 (0%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 104370 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatgg 104429 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 104430 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 104489 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104490 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 104549 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 104550 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactagac 104609 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 104610 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 104669 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 104670 ctctgaatactagatatgacccaaaaatcaca-gggtcaaggtcggccagtgagacgatg 104728 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104729 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 104788 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 104789 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 104829
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 813 bits (410), Expect = 0.0 Identities = 448/461 (97%) Strand = Plus / Minus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 132147 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 132088 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 132087 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 132028 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132027 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 131968 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131967 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 131908 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 131907 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 131848 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 131847 ctctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatg 131788 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131787 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 131728 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 || |||||||||||||||||||| |||||||| |||||||| Sbjct: 131727 gatcgctcagtgataaaggaggtaggggtgcagagacagcc 131687 Score = 813 bits (410), Expect = 0.0 Identities = 448/461 (97%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 104722 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 104781 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 104782 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 104841 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104842 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 104901 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104902 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 104961 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 104962 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 105021 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 105022 ctctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatg 105081 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105082 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 105141 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 || |||||||||||||||||||| |||||||| |||||||| Sbjct: 105142 gatcgctcagtgataaaggaggtaggggtgcagagacagcc 105182
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 805 bits (406), Expect = 0.0 Identities = 447/461 (96%) Strand = Plus / Minus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 135679 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 135620 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 135619 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 135560 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135559 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 135500 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135499 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 135440 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 135439 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 135380 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 135379 ctctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatg 135320 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135319 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 135260 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 || |||||||||||||||||||| |||||||| |||||||| Sbjct: 135259 gatcgctcagtgataaaggaggtaggggtgcagagacagcc 135219 Score = 805 bits (406), Expect = 0.0 Identities = 447/461 (96%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 106951 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 107010 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 107011 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 107070 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107071 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 107130 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107131 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 107190 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 107191 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 107250 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 107251 ctctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatg 107310 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107311 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 107370 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 || |||||||||||||||||||| |||||||| |||||||| Sbjct: 107371 gatcgctcagtgataaaggaggtaggggtgcagagacagcc 107411
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 805 bits (406), Expect = 0.0 Identities = 447/461 (96%) Strand = Plus / Minus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| || |||| ||||||||||||||||| Sbjct: 135280 ggaacccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgcttatgg 135221 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 135220 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 135161 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135160 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 135101 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135100 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 135041 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 135040 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 134981 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 134980 ctctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgagacgatg 134921 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134920 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 134861 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 134860 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 134820 Score = 805 bits (406), Expect = 0.0 Identities = 447/461 (96%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| || |||| ||||||||||||||||| Sbjct: 106626 ggaacccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgcttatgg 106685 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 106686 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 106745 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106746 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 106805 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106806 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 106865 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 106866 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 106925 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 106926 ctctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgagacgatg 106985 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106986 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 107045 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 107046 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 107086
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 805 bits (406), Expect = 0.0 Identities = 447/461 (96%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 2145 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 2204 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 2205 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 2264 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2265 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 2324 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2325 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 2384 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 2385 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 2444 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 2445 ctctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatg 2504 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2505 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 2564 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 || |||||||||||||||||||| |||||||| |||||||| Sbjct: 2565 gatcgctcagtgataaaggaggtaggggtgcagagacagcc 2605
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 805 bits (406), Expect = 0.0 Identities = 447/461 (96%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 627 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 686 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 687 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 746 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 747 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 806 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 807 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 866 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 867 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 926 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 927 ctctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacgatg 986 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 987 ggggataagcttcatcgtccagagggaaacagcccggatcaccagctaaggcccctaaat 1046 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 1047 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 1087
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 805 bits (406), Expect = 0.0 Identities = 447/461 (96%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 602 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 661 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 662 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 721 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 722 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 781 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 782 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 841 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 842 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 901 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 902 ctctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacgatg 961 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 962 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 1021 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||| |||||||||||||||| |||||||| |||||||| Sbjct: 1022 gaccgcccagtgataaaggaggtaggggtgcagagacagcc 1062
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 805 bits (406), Expect = 0.0 Identities = 447/461 (96%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 641 ggaacccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgcttatgg 700 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 701 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 760 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 761 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 820 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 821 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 880 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 881 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 940 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 941 ctctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgagacgatg 1000 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1001 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 1060 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 1061 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 1101
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 805 bits (406), Expect = 0.0 Identities = 447/461 (96%) Strand = Plus / Minus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| || |||| ||||||||||||||||| Sbjct: 135559 ggaacccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgcttatgg 135500 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 135499 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 135440 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135439 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 135380 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135379 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 135320 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 135319 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 135260 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 135259 ctctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgagacgatg 135200 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135199 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 135140 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 135139 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 135099 Score = 805 bits (406), Expect = 0.0 Identities = 447/461 (96%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| || |||| ||||||||||||||||| Sbjct: 106848 ggaacccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgcttatgg 106907 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 106908 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 106967 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106968 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 107027 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107028 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 107087 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 107088 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 107147 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 107148 ctctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgagacgatg 107207 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107208 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 107267 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 107268 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 107308
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 805 bits (406), Expect = 0.0 Identities = 447/461 (96%) Strand = Plus / Minus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 135677 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 135618 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 135617 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 135558 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135557 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 135498 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135497 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 135438 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 135437 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 135378 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 135377 ctctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatg 135318 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135317 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 135258 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 || |||||||||||||||||||| |||||||| |||||||| Sbjct: 135257 gatcgctcagtgataaaggaggtaggggtgcagagacagcc 135217 Score = 805 bits (406), Expect = 0.0 Identities = 447/461 (96%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 106949 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 107008 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 107009 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 107068 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107069 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 107128 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107129 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 107188 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 107189 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 107248 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 107249 ctctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatg 107308 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107309 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 107368 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 || |||||||||||||||||||| |||||||| |||||||| Sbjct: 107369 gatcgctcagtgataaaggaggtaggggtgcagagacagcc 107409
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 805 bits (406), Expect = 0.0 Identities = 447/461 (96%) Strand = Plus / Minus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 135408 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 135349 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 135348 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 135289 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135288 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 135229 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135228 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 135169 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 135168 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 135109 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 135108 ctctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatg 135049 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135048 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 134989 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 || |||||||||||||||||||| |||||||| |||||||| Sbjct: 134988 gatcgctcagtgataaaggaggtaggggtgcagagacagcc 134948 Score = 805 bits (406), Expect = 0.0 Identities = 447/461 (96%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 106730 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 106789 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 106790 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 106849 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106850 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 106909 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106910 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 106969 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 106970 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 107029 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 107030 ctctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatg 107089 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107090 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 107149 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 || |||||||||||||||||||| |||||||| |||||||| Sbjct: 107150 gatcgctcagtgataaaggaggtaggggtgcagagacagcc 107190
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 805 bits (406), Expect = 0.0 Identities = 447/461 (96%) Strand = Plus / Minus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 139088 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 139029 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 139028 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 138969 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138968 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 138909 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138908 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 138849 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 138848 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 138789 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| Sbjct: 138788 ctctgaatactagatatgacctccaaataataggggtcaaggtcggccagtgagacgatg 138729 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138728 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 138669 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 138668 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 138628 Score = 805 bits (406), Expect = 0.0 Identities = 447/461 (96%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 110211 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 110270 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 110271 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 110330 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110331 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 110390 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110391 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 110450 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 110451 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 110510 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| Sbjct: 110511 ctctgaatactagatatgacctccaaataataggggtcaaggtcggccagtgagacgatg 110570 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110571 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 110630 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 110631 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 110671
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 805 bits (406), Expect = 0.0 Identities = 447/461 (96%) Strand = Plus / Minus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 134937 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 134878 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 134877 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 134818 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134817 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 134758 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134757 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 134698 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 134697 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 134638 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 134637 ctctgaataatagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatg 134578 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134577 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 134518 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 134517 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 134477 Score = 805 bits (406), Expect = 0.0 Identities = 447/461 (96%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 106125 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 106184 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 106185 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 106244 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106245 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 106304 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106305 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 106364 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 106365 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 106424 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 106425 ctctgaataatagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatg 106484 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106485 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 106544 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 106545 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 106585
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 805 bits (406), Expect = 0.0 Identities = 447/461 (96%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 718 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 777 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 778 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 837 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 838 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 897 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 898 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 957 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 958 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 1017 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 1018 ctctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatg 1077 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1078 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 1137 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 || |||||||||||||||||||| |||||||| |||||||| Sbjct: 1138 gatcgctcagtgataaaggaggtaggggtgcagagacagcc 1178
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 791 bits (399), Expect = 0.0 Identities = 449/466 (96%), Gaps = 5/466 (1%) Strand = Plus / Minus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||| ||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 138964 ggaacccaccggagccatagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 138905 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 138904 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 138845 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138844 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 138785 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138784 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 138725 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 138724 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 138665 Query: 318 ctctgaatactagatatgaccc-----aaaaataacaggggtcaaggtcggccagtgaga 372 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 138664 ctctgaatactagatatgaccccaaaacaaaataacaggggtcaaggtcggccagtgaga 138605 Query: 373 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138604 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 138545 Query: 433 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 138544 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 138499 Score = 791 bits (399), Expect = 0.0 Identities = 449/466 (96%), Gaps = 5/466 (1%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||| ||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 110981 ggaacccaccggagccatagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 111040 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 111041 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 111100 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111101 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 111160 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111161 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 111220 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 111221 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 111280 Query: 318 ctctgaatactagatatgaccc-----aaaaataacaggggtcaaggtcggccagtgaga 372 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 111281 ctctgaatactagatatgaccccaaaacaaaataacaggggtcaaggtcggccagtgaga 111340 Query: 373 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111341 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 111400 Query: 433 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 111401 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 111446
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 789 bits (398), Expect = 0.0 Identities = 445/461 (96%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 620 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 679 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 |||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||| Sbjct: 680 acccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagtggagg 739 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 740 tccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccac 799 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 800 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 859 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 860 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 919 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| || Sbjct: 920 ctctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgagacggtg 979 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 980 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 1039 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 1040 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 1080
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 789 bits (398), Expect = 0.0 Identities = 445/461 (96%) Strand = Plus / Minus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 132377 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 132318 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 |||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||| Sbjct: 132317 acccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagtggagg 132258 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 132257 tccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccac 132198 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132197 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 132138 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 132137 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 132078 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| || Sbjct: 132077 ctctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgagacggtg 132018 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132017 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 131958 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 131957 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 131917 Score = 789 bits (398), Expect = 0.0 Identities = 445/461 (96%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 104387 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 104446 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 |||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||| Sbjct: 104447 acccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagtggagg 104506 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 104507 tccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccac 104566 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104567 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 104626 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 104627 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 104686 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| || Sbjct: 104687 ctctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgagacggtg 104746 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104747 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 104806 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 104807 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 104847
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 789 bits (398), Expect = 0.0 Identities = 445/461 (96%) Strand = Plus / Minus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 133338 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 133279 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 |||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||| Sbjct: 133278 acccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagtggagg 133219 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 133218 tccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccac 133159 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133158 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 133099 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 133098 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 133039 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| || Sbjct: 133038 ctctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgagacggtg 132979 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132978 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 132919 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 132918 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 132878 Score = 789 bits (398), Expect = 0.0 Identities = 445/461 (96%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 105311 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 105370 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 |||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||| Sbjct: 105371 acccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagtggagg 105430 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 105431 tccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccac 105490 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105491 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 105550 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 105551 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 105610 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| || Sbjct: 105611 ctctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgagacggtg 105670 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105671 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 105730 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 105731 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 105771
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 787 bits (397), Expect = 0.0 Identities = 445/461 (96%), Gaps = 4/461 (0%) Strand = Plus / Minus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 127242 ggaatccaccgtagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatgg 127183 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 127182 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 127123 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127122 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 127063 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127062 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 127003 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 127002 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 126943 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 |||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 126942 ctctgaatactagatatgacccca----aacaggggtcaaggtcggccagtgagacgatg 126887 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126886 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 126827 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 126826 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 126786 Score = 787 bits (397), Expect = 0.0 Identities = 445/461 (96%), Gaps = 4/461 (0%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 107680 ggaatccaccgtagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatgg 107739 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 107740 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 107799 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107800 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 107859 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107860 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 107919 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 107920 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 107979 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 |||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 107980 ctctgaatactagatatgacccca----aacaggggtcaaggtcggccagtgagacgatg 108035 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108036 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 108095 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 108096 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 108136
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 783 bits (395), Expect = 0.0 Identities = 446/462 (96%), Gaps = 1/462 (0%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 1116 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 1175 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 1176 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtgaggg 1235 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1236 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 1295 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1296 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 1355 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 1356 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 1415 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgat- 376 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1416 ctctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacgatg 1475 Query: 377 gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaa 436 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1476 gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaa 1535 Query: 437 tgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||| |||||||| |||||||| Sbjct: 1536 tgaccgctcagtgataaaggaggtaggggtgcagagacagcc 1577
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 783 bits (395), Expect = 0.0 Identities = 442/458 (96%) Strand = Plus / Minus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||| ||||||| ||||||||||||||||||||| | ||||| ||||||||||||||||| Sbjct: 131246 ggaaaccaccggagccgtagcgaaagcgagtcttcacagggcaattgtcactgcttatgg 131187 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 131186 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 131127 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131126 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 131067 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 131066 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactagac 131007 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 131006 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 130947 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| Sbjct: 130946 ctctgaatactagatatgacctcaaaataacaagggtcaaggtcggccagtgagacgatg 130887 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130886 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 130827 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagaca 475 ||||||||||||||||||||||| |||||||| ||||| Sbjct: 130826 gaccgctcagtgataaaggaggtaggggtgcagagaca 130789 Score = 783 bits (395), Expect = 0.0 Identities = 442/458 (96%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||| ||||||| ||||||||||||||||||||| | ||||| ||||||||||||||||| Sbjct: 104148 ggaaaccaccggagccgtagcgaaagcgagtcttcacagggcaattgtcactgcttatgg 104207 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 104208 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 104267 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104268 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 104327 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 104328 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactagac 104387 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 104388 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 104447 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| Sbjct: 104448 ctctgaatactagatatgacctcaaaataacaagggtcaaggtcggccagtgagacgatg 104507 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104508 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 104567 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagaca 475 ||||||||||||||||||||||| |||||||| ||||| Sbjct: 104568 gaccgctcagtgataaaggaggtaggggtgcagagaca 104605
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 781 bits (394), Expect = 0.0 Identities = 444/461 (96%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 629 ggaacccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgcttatgg 688 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||| Sbjct: 689 acccgaacctgggtgatctatccatgaccaggatggagcttgggtgaaactaagtggagg 748 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 749 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 808 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 809 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 868 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 869 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 928 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||| Sbjct: 929 ctctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgagacaatg 988 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 989 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 1048 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||| ||||||||||||| |||||||| |||||||| Sbjct: 1049 gaccgctcaatgataaaggaggtaggggtgcacagacagcc 1089
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 781 bits (394), Expect = 0.0 Identities = 444/461 (96%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||| ||| ||||||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 640 ggaacccaacggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgcttatgg 699 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 700 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 759 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 760 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 819 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 820 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 879 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 880 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 939 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||| Sbjct: 940 ctctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgagaccatg 999 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1000 ggggataagcttcatcgtccagagggaaacagcccggatcaccagctaaggcccctaaat 1059 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 1060 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 1100
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 773 bits (390), Expect = 0.0 Identities = 443/461 (96%) Strand = Plus / Minus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||| ||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 129909 ggaaaccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 129850 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 129849 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 129790 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129789 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 129730 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 129729 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgaccggac 129670 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 129669 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 129610 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||| Sbjct: 129609 ctctgaatactagatatgacctgaaaataataagggtcaaggtcggccagtgagacgatg 129550 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 129549 agggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggcccctaaat 129490 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 129489 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 129449 Score = 773 bits (390), Expect = 0.0 Identities = 443/461 (96%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||| ||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 102547 ggaaaccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 102606 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 102607 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 102666 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102667 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 102726 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 102727 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgaccggac 102786 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 102787 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 102846 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||| Sbjct: 102847 ctctgaatactagatatgacctgaaaataataagggtcaaggtcggccagtgagacgatg 102906 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 102907 agggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggcccctaaat 102966 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 102967 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 103007
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 769 bits (388), Expect = 0.0 Identities = 442/461 (95%), Gaps = 7/461 (1%) Strand = Plus / Minus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 134363 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 134304 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 134303 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 134244 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134243 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 134184 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134183 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 134124 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 134123 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 134064 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||| || ||| ||||||||||||||||||||||||||| Sbjct: 134063 ctctgaatactagatatgatcccaaa-------gggtcaaggtcggccagtgagacgatg 134011 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134010 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 133951 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 133950 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 133910 Score = 769 bits (388), Expect = 0.0 Identities = 442/461 (95%), Gaps = 7/461 (1%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 105919 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 105978 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 105979 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 106038 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106039 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 106098 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106099 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 106158 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 106159 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 106218 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||| || ||| ||||||||||||||||||||||||||| Sbjct: 106219 ctctgaatactagatatgatcccaaa-------gggtcaaggtcggccagtgagacgatg 106271 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106272 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 106331 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 106332 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 106372
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 769 bits (388), Expect = 0.0 Identities = 447/463 (96%), Gaps = 3/463 (0%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 2389 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 2448 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 2449 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 2508 Query: 138 -tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg-cc 195 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 2509 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatggcc 2568 Query: 196 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 255 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2569 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 2628 Query: 256 acatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 315 |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 2629 acatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 2688 Query: 316 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 375 |||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||| Sbjct: 2689 aactctgaatactagatatgactc-aaaataacaggggtcaaggtcggctagtgagacga 2747 Query: 376 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 435 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 2748 tgggggataagcttcatcgtcgagagggaaacagtccggatcaccagctaaggcccctaa 2807 Query: 436 atgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 2808 atgaccgctcagtgataaaggaggtaggggtgcagagacagcc 2850
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 767 bits (387), Expect = 0.0 Identities = 444/462 (96%), Gaps = 1/462 (0%) Strand = Plus / Plus Query: 18 ggaacccaccggn-gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatg 76 |||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 640 ggaacccaccggaagccgtagcgaaagcgagtcttcgtagggcaattgtcactgcttatg 699 Query: 77 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 136 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| Sbjct: 700 gacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggag 759 Query: 137 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 760 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 819 Query: 197 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 820 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 879 Query: 257 catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 316 |||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 880 catctaagggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaa 939 Query: 317 actctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgat 376 ||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 940 actctgaatactaaatatgacctcaaaataacaggggttaaggtcggccagtgagacgat 999 Query: 377 gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaa 436 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1000 gggggataagcttcatcgtccagagggaaacagcccggatcaccagctaaggcccctaaa 1059 Query: 437 tgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||| |||||||| |||||||| Sbjct: 1060 tgaccgctcagtgataaaggaggtaggggtgcacagacagcc 1101
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 745 bits (376), Expect = 0.0 Identities = 439/461 (95%), Gaps = 7/461 (1%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 106 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 165 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 166 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 225 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 226 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 285 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 286 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgactggac 345 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 346 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 405 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||| || || |||| |||||||||||||||||||||||||| Sbjct: 406 ctctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgagacgatg 458 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 518 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 519 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 559
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 745 bits (376), Expect = 0.0 Identities = 439/461 (95%), Gaps = 7/461 (1%) Strand = Plus / Minus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 139739 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 139680 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 139679 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 139620 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139619 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 139560 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 139559 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgactggac 139500 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 139499 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 139440 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||| || || |||| |||||||||||||||||||||||||| Sbjct: 139439 ctctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgagacgatg 139387 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139386 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 139327 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 139326 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 139286 Score = 745 bits (376), Expect = 0.0 Identities = 439/461 (95%), Gaps = 7/461 (1%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 110321 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 110380 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 110381 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 110440 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110441 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 110500 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 110501 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgactggac 110560 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 110561 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 110620 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||| || || |||| |||||||||||||||||||||||||| Sbjct: 110621 ctctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgagacgatg 110673 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110674 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 110733 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 110734 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 110774
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 743 bits (375), Expect = 0.0 Identities = 439/461 (95%), Gaps = 6/461 (1%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 641 ggaacccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgcttatgg 700 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 701 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 760 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 761 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 820 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 821 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 880 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||| Sbjct: 881 atctaggggtaaagcactgtttcggtgcgggccgcgagagcagtaccaaatcgaggcaaa 940 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| | |||||||| ||||||||||| |||||||||| Sbjct: 941 ctctgaatactagatatgacc------tcacaggggttaaggtcggccaatgagacgatg 994 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 995 ggggataagcttcatcttccagagggaaacagcccggatcaccagctaaggcccctaaat 1054 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1055 gaccgctcagtgataaaggaggtaggggtgcaaagacagcc 1095
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 737 bits (372), Expect = 0.0 Identities = 438/461 (95%), Gaps = 7/461 (1%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 122 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 181 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 182 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 241 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 242 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccgc 301 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 302 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgactggac 361 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 362 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 421 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||| || || |||| |||||||||||||||||||||||||| Sbjct: 422 ctctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgagacgatg 474 Query: 378 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 475 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 534 Query: 438 gaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 535 gaccgctcagtgataaaggaggtaggggtgcagagacagcc 575
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 735 bits (371), Expect = 0.0 Identities = 441/462 (95%), Gaps = 2/462 (0%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 177465 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 177524 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 177525 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 177584 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 177585 tccga-ccgactgatgttgaagaatcagcgggtgagttgtggttaggggtgaaatgccac 177643 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177644 tcgcacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 177703 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 ||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 177704 atctaggggtaaagcacggtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 177763 Query: 318 ctctgaatactagatatgacccaaaaataaca-ggggtcaaggtcggccagtgagacgat 376 ||||||||||||||||||||| ||||||| | |||| |||||||||| ||||||||||| Sbjct: 177764 ctctgaatactagatatgacctcaaaataagaggggggcaaggtcggctagtgagacgat 177823 Query: 377 gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaa 436 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 177824 gggggataagcttcatcgtcgagagggaaagagcccggatcaccagctaaggcccctaaa 177883 Query: 437 tgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||| |||||||| |||||||| Sbjct: 177884 tgaccgctcagtgataaaggaggtaggggtgcagagacagcc 177925 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 426 aggcccctaaatgaccgctcag 447 |||||||||||||||||||||| Sbjct: 327554 aggcccctaaatgaccgctcag 327575 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 394 gtcgagagggaaacagcccggatc 417 ||||||||||||||||||| |||| Sbjct: 418956 gtcgagagggaaacagcccagatc 418979 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 394 gtcgagagggaaacagcccggatc 417 ||||||||||||||||||| |||| Sbjct: 68206 gtcgagagggaaacagcccagatc 68229
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 733 bits (370), Expect = 0.0 Identities = 439/460 (95%), Gaps = 3/460 (0%) Strand = Plus / Plus Query: 22 cccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 81 |||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 639 cccaccggaaccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 698 Query: 82 gaacct--gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtc 139 ||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct: 699 gaaccctggggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtc 758 Query: 140 cgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactc 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 759 cgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactc 818 Query: 200 gaacccagagctagctggttctcccc-gaaatgcgttgaggcgcagcagttgactggaca 258 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 819 gaacccagagctagctggttctcccccgaaatgcgttgaggcgcagcagttgactggaca 878 Query: 259 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 318 ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 879 tctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaac 938 Query: 319 tctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgg 378 |||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||| Sbjct: 939 tctgaatactagatatgacctaaaaataacaagggtcaaggtcggcaagtgagacgatgg 998 Query: 379 gggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatg 438 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 999 gggataagcttcatcgtcgagagggaaacagccctgatcacccgctaaggcccctaaatg 1058 Query: 439 accgctcagtgataaaggaggtgggggtgcaaagacagcc 478 | |||||||||||||||||||| |||||||| |||||||| Sbjct: 1059 atcgctcagtgataaaggaggtaggggtgcagagacagcc 1098
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 728 bits (367), Expect = 0.0 Identities = 439/462 (95%), Gaps = 1/462 (0%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||| |||||||||||||| || ||||| | ||||||||||||||||| Sbjct: 620 ggaacccaccggagccatagcgaaagcgagtattcataggactattgtcactgcttatgg 679 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||| Sbjct: 680 acccgaacctgggtgatctatccatgaccaggatgaagctttggtgaaactaagtggagg 739 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 740 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 799 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 800 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 859 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 ||||||||||||||||||||||| |||||||| | | ||||||||||||||||| ||||| Sbjct: 860 atctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaagcaaa 919 Query: 318 ctctgaatactag-atatgacccaaaaataacaggggtcaaggtcggccagtgagacgat 376 ||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||| Sbjct: 920 ctctgaatactagaatatgacctaaaaataacaggggtaaaggtcggccagtgagacgat 979 Query: 377 gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaa 436 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 980 gggggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggcccctaat 1039 Query: 437 tgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||| |||||||||||||||||||| |||||||| |||||||| Sbjct: 1040 tgatcgctcagtgataaaggaggtaggggtgcagagacagcc 1081
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 722 bits (364), Expect = 0.0 Identities = 440/463 (95%), Gaps = 2/463 (0%) Strand = Plus / Minus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||| |||||||||||||| || ||||||| ||||||||||||||||| Sbjct: 52065 ggaacccaccggagccatagcgaaagcgagtattcatagggcaattgtcactgcttatgg 52006 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 52005 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 51946 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51945 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 51886 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51885 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 51826 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 ||||||||||||||||||||||| |||||||| | | ||||||||||||||||| ||||| Sbjct: 51825 atctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaagcaaa 51766 Query: 318 ctctgaatactag-atatgacccaaaaataacaggggtcaaggtcggccagtgagacgat 376 ||||||||||||| |||||||| | |||||| |||||| ||||||||||||||||||||| Sbjct: 51765 ctctgaatactagaatatgacctacaaataataggggtaaaggtcggccagtgagacgat 51706 Query: 377 gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaa 436 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51705 gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaat 51646 Query: 437 tgaccgctcagtgataaaggagg-tgggggtgcaaagacagcc 478 ||| ||||||||||||||||||| | |||||||| |||||||| Sbjct: 51645 tgatcgctcagtgataaaggaggttaggggtgcagagacagcc 51603 Score = 722 bits (364), Expect = 0.0 Identities = 440/463 (95%), Gaps = 2/463 (0%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||| |||||||||||||| || ||||||| ||||||||||||||||| Sbjct: 37763 ggaacccaccggagccatagcgaaagcgagtattcatagggcaattgtcactgcttatgg 37822 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 37823 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 37882 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37883 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 37942 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37943 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 38002 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 ||||||||||||||||||||||| |||||||| | | ||||||||||||||||| ||||| Sbjct: 38003 atctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaagcaaa 38062 Query: 318 ctctgaatactag-atatgacccaaaaataacaggggtcaaggtcggccagtgagacgat 376 ||||||||||||| |||||||| | |||||| |||||| ||||||||||||||||||||| Sbjct: 38063 ctctgaatactagaatatgacctacaaataataggggtaaaggtcggccagtgagacgat 38122 Query: 377 gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaa 436 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38123 gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaat 38182 Query: 437 tgaccgctcagtgataaaggagg-tgggggtgcaaagacagcc 478 ||| ||||||||||||||||||| | |||||||| |||||||| Sbjct: 38183 tgatcgctcagtgataaaggaggttaggggtgcagagacagcc 38225
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 722 bits (364), Expect = 0.0 Identities = 440/463 (95%), Gaps = 2/463 (0%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||| |||||||||||||| || ||||||| ||||||||||||||||| Sbjct: 4691 ggaacccaccggagccatagcgaaagcgagtattcatagggcaattgtcactgcttatgg 4750 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 4751 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 4810 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4811 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 4870 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4871 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 4930 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 ||||||||||||||||||||||| |||||||| | | ||||||||||||||||| ||||| Sbjct: 4931 atctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaagcaaa 4990 Query: 318 ctctgaatactag-atatgacccaaaaataacaggggtcaaggtcggccagtgagacgat 376 ||||||||||||| |||||||| | |||||| |||||| ||||||||||||||||||||| Sbjct: 4991 ctctgaatactagaatatgacctacaaataataggggtaaaggtcggccagtgagacgat 5050 Query: 377 gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaa 436 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5051 gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaat 5110 Query: 437 tgaccgctcagtgataaaggagg-tgggggtgcaaagacagcc 478 ||| ||||||||||||||||||| | |||||||| |||||||| Sbjct: 5111 tgatcgctcagtgataaaggaggttaggggtgcagagacagcc 5153
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 714 bits (360), Expect = 0.0 Identities = 439/463 (94%), Gaps = 2/463 (0%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| |||||| ||||||||| ||||||| Sbjct: 623 ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactacttatgg 682 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 683 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 742 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 743 tccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccac 802 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 803 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 862 Query: 258 -atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 316 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 863 tatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaa 922 Query: 317 actctgaatactagatatgacccaaaaataacagggg-tcaaggtcggccagtgagacga 375 |||||||||||||||||||| || |||||||||||| | |||||| ||||||||||| Sbjct: 923 actctgaatactagatatgatccccaaataacaggggataaaggtcaaccagtgagacgg 982 Query: 376 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 435 ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 983 tgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaaggcccctaa 1042 Query: 436 atgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||| |||||||||| || |||||||||||||| Sbjct: 1043 atgaccgctcagtggtaaaggaggtaggagtgcaaagacagcc 1085
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 710 bits (358), Expect = 0.0 Identities = 366/369 (99%) Strand = Plus / Minus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 |||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 369 ggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 310 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 309 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 250 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 249 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 190 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 130 Query: 241 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 70 Query: 301 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 69 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 10 Query: 361 cggccagtg 369 ||||||||| Sbjct: 9 cggccagtg 1
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 682 bits (344), Expect = 0.0 Identities = 435/463 (93%), Gaps = 2/463 (0%) Strand = Plus / Minus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| |||||| ||||||||| ||||||| Sbjct: 117526 ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactacttatgg 117467 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 |||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||| Sbjct: 117466 acccgaacctgggtgatctaaccatgaccaggatgaagcttgggtgaaactaagtggagg 117407 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 117406 tccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccac 117347 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117346 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 117287 Query: 258 -atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 316 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 117286 tatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaa 117227 Query: 317 actctgaatactagatatgacccaaaaataaca-ggggtcaaggtcggccagtgagacga 375 |||||||||||||||||||| || |||||| | ||||| | |||| ||||||||||| Sbjct: 117226 actctgaatactagatatgatccccaaataatagggggtaatggtcaaccagtgagacgg 117167 Query: 376 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 435 ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 117166 tgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaaggcccctaa 117107 Query: 436 atgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||| |||| |||||||||| || |||||||||||||| Sbjct: 117106 atgaccgctaagtggtaaaggaggtaggagtgcaaagacagcc 117064 Score = 682 bits (344), Expect = 0.0 Identities = 435/463 (93%), Gaps = 2/463 (0%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| |||||| ||||||||| ||||||| Sbjct: 90576 ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactacttatgg 90635 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 |||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||| Sbjct: 90636 acccgaacctgggtgatctaaccatgaccaggatgaagcttgggtgaaactaagtggagg 90695 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 90696 tccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccac 90755 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90756 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 90815 Query: 258 -atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 316 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 90816 tatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaa 90875 Query: 317 actctgaatactagatatgacccaaaaataaca-ggggtcaaggtcggccagtgagacga 375 |||||||||||||||||||| || |||||| | ||||| | |||| ||||||||||| Sbjct: 90876 actctgaatactagatatgatccccaaataatagggggtaatggtcaaccagtgagacgg 90935 Query: 376 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 435 ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 90936 tgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaaggcccctaa 90995 Query: 436 atgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||| |||| |||||||||| || |||||||||||||| Sbjct: 90996 atgaccgctaagtggtaaaggaggtaggagtgcaaagacagcc 91038
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 668 bits (337), Expect = 0.0 Identities = 431/460 (93%), Gaps = 2/460 (0%) Strand = Plus / Plus Query: 21 acccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 80 ||||||||| ||||||||||||||||||||| | |||| ||||||||| |||||||||| Sbjct: 626 acccaccggagccgtagcgaaagcgagtcttcctggggcaattgtcactacttatggacc 685 Query: 81 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 140 ||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||| Sbjct: 686 cgaacctgggtgatctatccatgaccaggatgaagctcgggtgaaactaagtggaggtcc 745 Query: 141 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 200 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 746 gaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcg 805 Query: 201 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-at 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 806 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactat 865 Query: 260 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 319 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 866 ctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaact 925 Query: 320 ctgaatactagatatgacccaaaaataacagggg-tcaaggtcggccagtgagacgatgg 378 ||||||||||||||||| | |||||| |||| | | |||| ||||||||||| ||| Sbjct: 926 ctgaatactagatatgatctccgaataacgggggataagggtcaaccagtgagacggtgg 985 Query: 379 gggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatg 438 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 986 gggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggcccctaaatg 1045 Query: 439 accgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||| |||||||||| || |||||||||||||| Sbjct: 1046 accgctcagtggtaaaggaggtaggagtgcaaagacagcc 1085
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 666 bits (336), Expect = 0.0 Identities = 438/468 (93%), Gaps = 7/468 (1%) Strand = Plus / Minus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 145936 ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatgg 145877 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 145876 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 145817 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 145816 tccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccaa 145757 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145756 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 145697 Query: 258 -atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 316 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 145696 tatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaa 145637 Query: 317 actctgaatactagatatga--cccaa---aaataacagg-ggtcaaggtcggccagtga 370 |||||||||||||| ||||| |||| ||| |||||| ||| |||||| |||||||| Sbjct: 145636 actctgaatactaggtatgatctccaaatgaaagaacaggaggtaaaggtcagccagtga 145577 Query: 371 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 430 |||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 145576 gacggtgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaaggcc 145517 Query: 431 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||| | |||||||| || ||||| |||||||| Sbjct: 145516 cctaaatgaccgctcagtggtgaaggaggtaggagtgcagagacagcc 145469 Score = 666 bits (336), Expect = 0.0 Identities = 438/468 (93%), Gaps = 7/468 (1%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 112526 ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatgg 112585 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 112586 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 112645 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 112646 tccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccaa 112705 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112706 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 112765 Query: 258 -atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 316 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 112766 tatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaa 112825 Query: 317 actctgaatactagatatga--cccaa---aaataacagg-ggtcaaggtcggccagtga 370 |||||||||||||| ||||| |||| ||| |||||| ||| |||||| |||||||| Sbjct: 112826 actctgaatactaggtatgatctccaaatgaaagaacaggaggtaaaggtcagccagtga 112885 Query: 371 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 430 |||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 112886 gacggtgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaaggcc 112945 Query: 431 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||| | |||||||| || ||||| |||||||| Sbjct: 112946 cctaaatgaccgctcagtggtgaaggaggtaggagtgcagagacagcc 112993
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 660 bits (333), Expect = 0.0 Identities = 432/462 (93%), Gaps = 5/462 (1%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| |||||||||| |||||||||| || |||| ||||||||||||||||| Sbjct: 86886 ggaacccaccggagccgtagcgagagcgagtcttcatggggcaattgtcactgcttatgg 86945 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 86946 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 87005 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 87006 tccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccac 87065 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga- 256 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87066 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 87125 Query: 257 catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 316 ||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||| Sbjct: 87126 catctaggggtaaagcactgtttcggtacgggccgcgagagcggtaccaaatcgaggcaa 87185 Query: 317 actctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgat 376 |||||||||||||||| || ||| ||||| |||||| | |||| ||||||||||||| Sbjct: 87186 actctgaatactagat-tgcccc---aataaaaggggtaagggtcaaccagtgagacgat 87241 Query: 377 gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaa 436 ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 87242 gggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaaggcccctaaa 87301 Query: 437 tgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||| ||||| || | |||||||||||||| Sbjct: 87302 tgaccgctcagtgatgaaggaagtacgagtgcaaagacagcc 87343
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 652 bits (329), Expect = 0.0 Identities = 361/372 (97%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 46878 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 46937 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 46938 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 46997 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46998 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 47057 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47058 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 47117 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 47118 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 47177 Query: 318 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 377 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 47178 ctctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacgatg 47237 Query: 378 ggggataagctt 389 |||||||||||| Sbjct: 47238 ggggataagctt 47249
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 648 bits (327), Expect = 0.0 Identities = 372/386 (96%), Gaps = 1/386 (0%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaag-cgagtcttaatagggcgattgtcactgcttatg 76 |||||||||||| ||||||||||||| |||||||| ||||||| |||||||||||||||| Sbjct: 364803 ggaacccaccggagccgtagcgaaaggcgagtcttcatagggcaattgtcactgcttatg 364862 Query: 77 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 136 ||||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||| Sbjct: 364863 gacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagtggag 364922 Query: 137 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 196 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 364923 gtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgcca 364982 Query: 197 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364983 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 365042 Query: 257 catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 316 ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 365043 catctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaa 365102 Query: 317 actctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgat 376 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct: 365103 actctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgagacggt 365162 Query: 377 gggggataagcttcatcgtcgagagg 402 |||||||||||||||||||||||||| Sbjct: 365163 gggggataagcttcatcgtcgagagg 365188 Score = 123 bits (62), Expect = 6e-25 Identities = 77/82 (93%) Strand = Plus / Minus Query: 397 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 456 |||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| Sbjct: 129347 gagagggaaacagcccggatcaccagctaaggcccccaaatggccgctcagttataaagg 129288 Query: 457 aggtgggggtgcaaagacagcc 478 |||| |||||||| |||||||| Sbjct: 129287 aggtaggggtgcagagacagcc 129266 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 394 gtcgagagggaaacagcccggatc 417 ||||||||||||||||||| |||| Sbjct: 10984 gtcgagagggaaacagcccagatc 10961
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 640 bits (323), Expect = 0.0 Identities = 428/462 (92%), Gaps = 1/462 (0%) Strand = Plus / Minus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| |||||| |||||||||||| |||| Sbjct: 127818 ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgctcatgg 127759 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||| Sbjct: 127758 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtaaaactaagtggagg 127699 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 127698 tccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccac 127639 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 127638 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgaccggac 127579 Query: 258 -atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 316 | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 127578 tacctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaa 127519 Query: 317 actctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgat 376 |||||||||||||| |||||||| || ||| ||| | |||| ||||||||||||| Sbjct: 127518 actctgaatactaggtatgacccccgaagaacggggaaaagggtcaaccagtgagacgat 127459 Query: 377 gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaa 436 |||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 127458 gggggataagcttcattgtcgagaggggaacagcccagatcaccagctaaggcccctaaa 127399 Query: 437 tgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||| |||||||| |||||||||| || |||||||||||||| Sbjct: 127398 tgactgctcagtggtaaaggaggtaggagtgcaaagacagcc 127357 Score = 640 bits (323), Expect = 0.0 Identities = 428/462 (92%), Gaps = 1/462 (0%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| |||||| |||||||||||| |||| Sbjct: 95629 ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgctcatgg 95688 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||| Sbjct: 95689 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtaaaactaagtggagg 95748 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95749 tccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccac 95808 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 95809 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgaccggac 95868 Query: 258 -atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 316 | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 95869 tacctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaa 95928 Query: 317 actctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgat 376 |||||||||||||| |||||||| || ||| ||| | |||| ||||||||||||| Sbjct: 95929 actctgaatactaggtatgacccccgaagaacggggaaaagggtcaaccagtgagacgat 95988 Query: 377 gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaa 436 |||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 95989 gggggataagcttcattgtcgagaggggaacagcccagatcaccagctaaggcccctaaa 96048 Query: 437 tgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||| |||||||| |||||||||| || |||||||||||||| Sbjct: 96049 tgactgctcagtggtaaaggaggtaggagtgcaaagacagcc 96090
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 634 bits (320), Expect = e-179 Identities = 429/462 (92%), Gaps = 4/462 (0%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| |||||||||| |||||||||| || |||| ||||||||||||||||| Sbjct: 88972 ggaacccaccggagccgtagcgagagcgagtcttcatggggcaattgtcactgcttatgg 89031 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 89032 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 89091 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 89092 tccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccac 89151 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga- 256 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89152 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 89211 Query: 257 catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 316 ||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||| Sbjct: 89212 catctaggggtaaagcactgtttcggtacgggccacgagagcggtaccaaatcgaggcaa 89271 Query: 317 actctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgat 376 |||||||||||||||| | ||||| | || ||||| | |||| ||||||||||||| Sbjct: 89272 actctgaatactagat-taccccaata--aaagggggtaagggtcaaccagtgagacgat 89328 Query: 377 gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaa 436 ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 89329 gggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaaggcccctaaa 89388 Query: 437 tgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||| ||||| || | |||||||||||||| Sbjct: 89389 tgaccgctcagtgatgaaggaagtacgagtgcaaagacagcc 89430
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 618 bits (312), Expect = e-174 Identities = 427/463 (92%), Gaps = 2/463 (0%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| |||||||||||||| |||||| | |||| ||||||||||||||||| Sbjct: 627 ggaacccaccggagccgtagcgaaagcaagtcttcctggggcaattgtcactgcttatgg 686 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 687 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 746 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 747 tccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccac 806 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 807 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactagac 866 Query: 258 -atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 316 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 867 tatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaa 926 Query: 317 actctgaatactagatatgacccaaaaataacag-gggtcaaggtcggccagtgagacga 375 |||||||||||| |||| ||| | ||||| || | || | |||| |||||||||| Sbjct: 927 actctgaatactggataggactccctaataatagagagtaagggtcaaccagtgagacag 986 Query: 376 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 435 ||||||||||||||||| |||||||||| |||||||| ||||||| |||||||||||||| Sbjct: 987 tgggggataagcttcattgtcgagaggggaacagcccagatcaccggctaaggcccctaa 1046 Query: 436 atgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||| |||| |||||||||| || |||||||||||||| Sbjct: 1047 atgaccgctaagtggtaaaggaggtaggagtgcaaagacagcc 1089
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 533 bits (269), Expect = e-148 Identities = 410/455 (90%), Gaps = 3/455 (0%) Strand = Plus / Plus Query: 23 ccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 82 ||||||| | | |||||||||| |||||| ||||||| | ||||| |||||||||||||| Sbjct: 631 ccaccggagtcatagcgaaagcaagtcttcatagggcaaatgtcattgcttatggacccg 690 Query: 83 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 142 ||| ||||||||||| ||||||||| |||||| |||| |||||||||| ||||||||| Sbjct: 691 aacttgggtgatctaaccatgaccaagatgaaatttggttgaaactaagtggaggtccga 750 Query: 143 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || Sbjct: 751 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccaatcaaa 810 Query: 203 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatcta 262 |||| |||||| ||||||||||||||||||||| |||||||| |||| || |||||||| Sbjct: 811 cccaaagctagttggttctccccgaaatgcgtttaggcgcagaagtt-accagacatcta 869 Query: 263 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 322 ||||||||||||||||||||| |||| ||| |||| ||||||||| |||||||||| || Sbjct: 870 ggggtaaagcactgtttcggttcgggtcgcgagagccgtaccaaattgaggcaaactatg 929 Query: 323 aatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 380 ||||||||||||||| ||||||||||||||| | ||||| | |||||||||| |||||| Sbjct: 930 aatactagatatgacctccaaaaataacagggataaaggtggaccagtgagaccatgggg 989 Query: 381 gataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgac 440 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 990 gataagcttcatcgtcgagaggggaacagcccagatcaccagctaaggcccctaaatgac 1049 Query: 441 cgctcagtgataaaggaggtgggggtgcaaagaca 475 |||| ||| ||||||||||| |||||||| ||||| Sbjct: 1050 cgctaagttataaaggaggtaggggtgcatagaca 1084
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 529 bits (267), Expect = e-147 Identities = 300/310 (96%), Gaps = 1/310 (0%) Strand = Plus / Minus Query: 22 cccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 81 |||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||| Sbjct: 115584 cccaccggagccgtagcgaaagcgagtcttcttagggcaattgtcactgcttatggaccc 115525 Query: 82 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 141 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 115524 gaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccg 115465 Query: 142 aaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcga 201 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 115464 aaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcga 115405 Query: 202 acccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atc 260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 115404 acccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatc 115345 Query: 261 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 320 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 115344 taggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactc 115285 Query: 321 tgaatactag 330 |||||||||| Sbjct: 115284 tgaatactag 115275 Score = 529 bits (267), Expect = e-147 Identities = 300/310 (96%), Gaps = 1/310 (0%) Strand = Plus / Plus Query: 22 cccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 81 |||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||| Sbjct: 86536 cccaccggagccgtagcgaaagcgagtcttcttagggcaattgtcactgcttatggaccc 86595 Query: 82 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 141 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 86596 gaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccg 86655 Query: 142 aaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcga 201 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 86656 aaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcga 86715 Query: 202 acccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atc 260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 86716 acccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatc 86775 Query: 261 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 320 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 86776 taggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactc 86835 Query: 321 tgaatactag 330 |||||||||| Sbjct: 86836 tgaatactag 86845 Score = 168 bits (85), Expect = 1e-38 Identities = 112/121 (92%) Strand = Plus / Minus Query: 358 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 417 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 115246 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 115187 Query: 418 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 477 |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 115186 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 115127 Query: 478 c 478 | Sbjct: 115126 c 115126 Score = 168 bits (85), Expect = 1e-38 Identities = 112/121 (92%) Strand = Plus / Plus Query: 358 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 417 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 86874 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 86933 Query: 418 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 477 |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 86934 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 86993 Query: 478 c 478 | Sbjct: 86994 c 86994
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 527 bits (266), Expect = e-146 Identities = 304/317 (95%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||| ||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 4851 ggaaaccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgcttatgg 4910 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||| Sbjct: 4911 acccgaacctgggtgatctatccatgaccaggatgaagcttaggtgaaactaagtggagg 4970 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 4971 tccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatgccac 5030 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5031 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 5090 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 ||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||| Sbjct: 5091 atctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgaggcaaa 5150 Query: 318 ctctgaatactagatat 334 ||||||||||||||||| Sbjct: 5151 ctctgaatactagatat 5167 Score = 198 bits (100), Expect = 1e-47 Identities = 115/120 (95%) Strand = Plus / Plus Query: 359 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 5182 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 5241 Query: 419 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||||| Sbjct: 5242 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagcc 5301
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 527 bits (266), Expect = e-146 Identities = 302/313 (96%), Gaps = 1/313 (0%) Strand = Plus / Plus Query: 24 caccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccga 83 |||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 4518 caccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccga 4577 Query: 84 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 143 ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| Sbjct: 4578 acctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaa 4637 Query: 144 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 203 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4638 ccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 4697 Query: 204 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atcta 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 4698 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatcta 4757 Query: 263 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 322 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 4758 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctg 4817 Query: 323 aatactagatatg 335 |||||||| |||| Sbjct: 4818 aatactaggtatg 4830 Score = 176 bits (89), Expect = 4e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 358 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 417 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 4858 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 4917 Query: 418 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 477 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 4918 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 4977 Query: 478 c 478 | Sbjct: 4978 c 4978
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 527 bits (266), Expect = e-146 Identities = 416/464 (89%), Gaps = 3/464 (0%) Strand = Plus / Minus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||| | |||| |||||||||| Sbjct: 138645 ggaacccaccggagccgtagcgaaagcgagtcttcccagggcaactgtcgctgcttatgg 138586 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||| ||||||||||||||||||||||||||||||||||| ||| | | |||| Sbjct: 138585 acccgaacccgggtgatctatccatgaccaggatgaagcttggatagaaccaggtggagg 138526 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 138525 tccgaaccgactgatgttgaaaaatcagcggatgagtcgtggttaggggtgaaatgccac 138466 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact-gga 256 |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 138465 tcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttgactaggc 138406 Query: 257 catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 316 | || | |||||||||||||| |||||||||||||| |||| |||||||| |||||||| Sbjct: 138405 tacctggaggtaaagcactgttacggtgcgggctgcgagagcagtaccaaaccgaggcaa 138346 Query: 317 actctgaatactagatatgacccaaaaataaca--ggggtcaaggtcggccagtgagacg 374 |||||||||||| | |||| ||| | | | ||| |||| ||||||||||||||||||| Sbjct: 138345 actctgaatactgggtatggccccagagtcacacgagggtgaaggtcggccagtgagacg 138286 Query: 375 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 434 |||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| Sbjct: 138285 gtgggggataagcttcaccgtcgagaggggaacagcccagatcaccagctaaggcccctg 138226 Query: 435 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||| | |||||||| || |||||||||||||| Sbjct: 138225 aatgaccgctcagtggtgaaggaggtaggagtgcaaagacagcc 138182 Score = 527 bits (266), Expect = e-146 Identities = 416/464 (89%), Gaps = 3/464 (0%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||| | |||| |||||||||| Sbjct: 83232 ggaacccaccggagccgtagcgaaagcgagtcttcccagggcaactgtcgctgcttatgg 83291 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||| ||||||||||||||||||||||||||||||||||| ||| | | |||| Sbjct: 83292 acccgaacccgggtgatctatccatgaccaggatgaagcttggatagaaccaggtggagg 83351 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 83352 tccgaaccgactgatgttgaaaaatcagcggatgagtcgtggttaggggtgaaatgccac 83411 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact-gga 256 |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 83412 tcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttgactaggc 83471 Query: 257 catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 316 | || | |||||||||||||| |||||||||||||| |||| |||||||| |||||||| Sbjct: 83472 tacctggaggtaaagcactgttacggtgcgggctgcgagagcagtaccaaaccgaggcaa 83531 Query: 317 actctgaatactagatatgacccaaaaataaca--ggggtcaaggtcggccagtgagacg 374 |||||||||||| | |||| ||| | | | ||| |||| ||||||||||||||||||| Sbjct: 83532 actctgaatactgggtatggccccagagtcacacgagggtgaaggtcggccagtgagacg 83591 Query: 375 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 434 |||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| Sbjct: 83592 gtgggggataagcttcaccgtcgagaggggaacagcccagatcaccagctaaggcccctg 83651 Query: 435 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||| | |||||||| || |||||||||||||| Sbjct: 83652 aatgaccgctcagtggtgaaggaggtaggagtgcaaagacagcc 83695
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 527 bits (266), Expect = e-146 Identities = 304/317 (95%) Strand = Plus / Minus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||| ||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 23074 ggaaaccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgcttatgg 23015 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||| Sbjct: 23014 acccgaacctgggtgatctatccatgaccaggatgaagcttaggtgaaactaagtggagg 22955 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 22954 tccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatgccac 22895 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22894 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 22835 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 ||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||| Sbjct: 22834 atctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgaggcaaa 22775 Query: 318 ctctgaatactagatat 334 ||||||||||||||||| Sbjct: 22774 ctctgaatactagatat 22758 Score = 198 bits (100), Expect = 1e-47 Identities = 115/120 (95%) Strand = Plus / Minus Query: 359 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 22743 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 22684 Query: 419 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||||| Sbjct: 22683 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagcc 22624
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 527 bits (266), Expect = e-146 Identities = 302/313 (96%), Gaps = 1/313 (0%) Strand = Plus / Plus Query: 24 caccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccga 83 |||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 628 caccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccga 687 Query: 84 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 143 ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| Sbjct: 688 acctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaa 747 Query: 144 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 203 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 748 ccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 807 Query: 204 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atcta 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 808 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatcta 867 Query: 263 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 322 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 868 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctg 927 Query: 323 aatactagatatg 335 |||||||| |||| Sbjct: 928 aatactaggtatg 940 Score = 176 bits (89), Expect = 4e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 358 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 417 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 418 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 477 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 1087 Query: 478 c 478 | Sbjct: 1088 c 1088
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 527 bits (266), Expect = e-146 Identities = 302/313 (96%), Gaps = 1/313 (0%) Strand = Plus / Minus Query: 24 caccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccga 83 |||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 150617 caccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccga 150558 Query: 84 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 143 ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| Sbjct: 150557 acctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaa 150498 Query: 144 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 203 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150497 ccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 150438 Query: 204 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atcta 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 150437 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatcta 150378 Query: 263 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 322 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 150377 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctg 150318 Query: 323 aatactagatatg 335 |||||||| |||| Sbjct: 150317 aatactaggtatg 150305 Score = 527 bits (266), Expect = e-146 Identities = 302/313 (96%), Gaps = 1/313 (0%) Strand = Plus / Plus Query: 24 caccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccga 83 |||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 118049 caccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccga 118108 Query: 84 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 143 ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| Sbjct: 118109 acctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaa 118168 Query: 144 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 203 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118169 ccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 118228 Query: 204 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atcta 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 118229 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatcta 118288 Query: 263 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 322 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 118289 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctg 118348 Query: 323 aatactagatatg 335 |||||||| |||| Sbjct: 118349 aatactaggtatg 118361 Score = 176 bits (89), Expect = 4e-41 Identities = 113/121 (93%) Strand = Plus / Minus Query: 358 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 417 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 150277 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 150218 Query: 418 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 477 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 150217 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 150158 Query: 478 c 478 | Sbjct: 150157 c 150157 Score = 176 bits (89), Expect = 4e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 358 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 417 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 118389 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 118448 Query: 418 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 477 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 118449 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 118508 Query: 478 c 478 | Sbjct: 118509 c 118509
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 527 bits (266), Expect = e-146 Identities = 302/313 (96%), Gaps = 1/313 (0%) Strand = Plus / Plus Query: 24 caccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccga 83 |||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 628 caccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccga 687 Query: 84 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 143 ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| Sbjct: 688 acctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaa 747 Query: 144 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 203 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 748 ccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 807 Query: 204 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atcta 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 808 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatcta 867 Query: 263 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 322 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 868 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctg 927 Query: 323 aatactagatatg 335 |||||||| |||| Sbjct: 928 aatactaggtatg 940 Score = 176 bits (89), Expect = 4e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 358 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 417 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 418 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 477 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 1087 Query: 478 c 478 | Sbjct: 1088 c 1088
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 521 bits (263), Expect = e-145 Identities = 307/322 (95%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||| ||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 5119 ggaaaccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgcttatgg 5178 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 |||||||||||||||||||||||||||||||||||||| || | |||||||||| |||| Sbjct: 5179 acccgaacctgggtgatctatccatgaccaggatgaagtttaggtgaaactaagtggagg 5238 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 5239 tccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatgccaa 5298 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5299 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 5358 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 ||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||| Sbjct: 5359 atctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgaggcaaa 5418 Query: 318 ctctgaatactagatatgaccc 339 |||||||||||||||||||||| Sbjct: 5419 ctctgaatactagatatgaccc 5440 Score = 200 bits (101), Expect = 3e-48 Identities = 123/129 (95%), Gaps = 1/129 (0%) Strand = Plus / Plus Query: 351 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 409 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 410 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 469 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgca 5564 Query: 470 aagacagcc 478 |||||||| Sbjct: 5565 gagacagcc 5573
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 521 bits (263), Expect = e-145 Identities = 307/322 (95%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||| ||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 5119 ggaaaccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgcttatgg 5178 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 |||||||||||||||||||||||||||||||||||||| || | |||||||||| |||| Sbjct: 5179 acccgaacctgggtgatctatccatgaccaggatgaagtttaggtgaaactaagtggagg 5238 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 5239 tccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatgccaa 5298 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5299 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 5358 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 ||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||| Sbjct: 5359 atctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgaggcaaa 5418 Query: 318 ctctgaatactagatatgaccc 339 |||||||||||||||||||||| Sbjct: 5419 ctctgaatactagatatgaccc 5440 Score = 200 bits (101), Expect = 3e-48 Identities = 123/129 (95%), Gaps = 1/129 (0%) Strand = Plus / Plus Query: 351 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 409 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 410 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 469 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgca 5564 Query: 470 aagacagcc 478 |||||||| Sbjct: 5565 gagacagcc 5573
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 494 bits (249), Expect = e-136 Identities = 297/312 (95%), Gaps = 1/312 (0%) Strand = Plus / Plus Query: 23 ccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 82 ||||||| ||| ||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 614 ccaccggagccatagcgaaagcgagtcttcccagggcaattgtcactgcttatggacccg 673 Query: 83 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 142 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 674 aacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccga 733 Query: 143 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 202 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 734 accgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 793 Query: 203 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atct 261 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| Sbjct: 794 cccagagctagctggttctccccgaaatgcgttgaggcgcaacagttgactggactatct 853 Query: 262 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 321 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 854 aggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactct 913 Query: 322 gaatactagata 333 ||||||| |||| Sbjct: 914 gaatactggata 925 Score = 165 bits (83), Expect = 2e-37 Identities = 107/115 (93%) Strand = Plus / Plus Query: 364 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 423 |||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 955 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcaccagc 1014 Query: 424 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||| |||| | |||||||| ||||||||||||||||| Sbjct: 1015 taaggcccctaaatgaccgctaagtggtgaaggaggtaggggtgcaaagacagcc 1069
>gb|AF263517.1|AF263517 Vitis vinifera 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 433 Score = 494 bits (249), Expect = e-136 Identities = 275/284 (96%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 150 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 209 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 210 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 269 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 270 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 329 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 330 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgactggac 389 Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 301 |||||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 390 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggt 433
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 486 bits (245), Expect = e-134 Identities = 342/373 (91%), Gaps = 1/373 (0%) Strand = Plus / Minus Query: 106 caggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcag 165 ||||||| ||||||| |||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 3111 caggatgcagcttgggtgaaactaagtggaggtccgaactgactgatgttgaagaatcag 3052 Query: 166 cggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc 225 |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 3051 cggatgagttgtggttaggggtgaaatgccactcaaacc-agagctagctggttctccct 2993 Query: 226 gaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc 285 ||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2992 gaaatgcattgaagcgcagcagttgactggacatctaggagtaaagcactgtttcggtgc 2933 Query: 286 gggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaat 345 |||| | |||| ||||||||| ||||||||||||||||| |||||| || | ||||| Sbjct: 2932 gggcaatgagagcagtaccaaattgaggcaaactctgaatattagatacgatctcaaaat 2873 Query: 346 aacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaa 405 ||| |||||||||||||| |||||||||| | ||||||||||||||||||||||||||| Sbjct: 2872 cacaagggtcaaggtcggcgagtgagacgacgagggataagcttcatcgtcgagagggaa 2813 Query: 406 acagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg 465 ||| || |||||||||||||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 2812 acaacctggatcaccagctaaggcccctaaatgactgctcagtgataaaggaggtagggg 2753 Query: 466 tgcaaagacagcc 478 ||||||||||||| Sbjct: 2752 tgcaaagacagcc 2740 Score = 85.7 bits (43), Expect = 1e-13 Identities = 63/70 (90%) Strand = Plus / Minus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||| ||||||||||||||| ||| |||| ||| ||||||||||||| Sbjct: 3189 ggaacccaccggagccatagcgaaagcgagtcagaatggggcaattctcactgcttatgg 3130 Query: 78 acccgaacct 87 |||||||||| Sbjct: 3129 acccgaacct 3120
>gb|AF143267.1| Vitis vinifera 23S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 425 Score = 474 bits (239), Expect = e-130 Identities = 262/270 (97%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 146 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 205 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 206 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 265 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 266 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 325 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| Sbjct: 326 tcgaacccagagctagctggctctccccgaaatgcgttgaggcgcagcggttgactggac 385 Query: 258 atctaggggtaaagcactgtttcggtgcgg 287 |||||||||||||||||||||||||||||| Sbjct: 386 atctaggggtaaagcactgtttcggtgcgg 415
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 470 bits (237), Expect = e-129 Identities = 291/308 (94%), Gaps = 1/308 (0%) Strand = Plus / Plus Query: 26 ccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 85 |||| ||||||||||||||||||||| | |||| |||||||| |||||| |||||||| Sbjct: 144553 ccggagccgtagcgaaagcgagtcttgctggggcaattgtcaccgcttataaacccgaac 144612 Query: 86 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 145 ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| Sbjct: 144613 ctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaacc 144672 Query: 146 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 205 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144673 gactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 144732 Query: 206 agagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga-catctagg 264 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 144733 agagctagctggttctccccgaaatgcgttgaggcgcagcagttgactagaccatctagg 144792 Query: 265 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 324 |||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 144793 ggtaaagcaccgttccggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaa 144852 Query: 325 tactagat 332 |||||||| Sbjct: 144853 tactagat 144860 Score = 470 bits (237), Expect = e-129 Identities = 291/308 (94%), Gaps = 1/308 (0%) Strand = Plus / Minus Query: 26 ccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 85 |||| ||||||||||||||||||||| | |||| |||||||| |||||| |||||||| Sbjct: 88298 ccggagccgtagcgaaagcgagtcttgctggggcaattgtcaccgcttataaacccgaac 88239 Query: 86 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 145 ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| Sbjct: 88238 ctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaacc 88179 Query: 146 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 205 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88178 gactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 88119 Query: 206 agagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga-catctagg 264 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 88118 agagctagctggttctccccgaaatgcgttgaggcgcagcagttgactagaccatctagg 88059 Query: 265 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 324 |||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 88058 ggtaaagcaccgttccggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaa 87999 Query: 325 tactagat 332 |||||||| Sbjct: 87998 tactagat 87991 Score = 172 bits (87), Expect = 7e-40 Identities = 108/115 (93%) Strand = Plus / Plus Query: 364 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 423 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 144899 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 144958 Query: 424 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||| |||||||||| || |||||||||||||| Sbjct: 144959 taaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagcc 145013 Score = 172 bits (87), Expect = 7e-40 Identities = 108/115 (93%) Strand = Plus / Minus Query: 364 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 423 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 87952 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 87893 Query: 424 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||| |||||||||| || |||||||||||||| Sbjct: 87892 taaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagcc 87838
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 440 bits (222), Expect = e-120 Identities = 296/317 (93%), Gaps = 3/317 (0%) Strand = Plus / Minus Query: 21 acccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgctt-atggac 79 ||||||||| |||||||||| |||||||||| ||||||| ||||||||||||| |||||| Sbjct: 5922 acccaccggagccgtagcgagagcgagtcttcatagggcaattgtcactgctttatggac 5863 Query: 80 ccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtc 139 |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| Sbjct: 5862 ccgaacctgggtgatctatccatgaccaggatgaagct-ggatgaaactaagtagaggtc 5804 Query: 140 cgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactc 199 ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 5803 cgaaccgactgatgttgcaaaatcagcggatgagttgtggttaggggtgaaatgccactc 5744 Query: 200 gaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga-ca 258 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 5743 gaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggaccg 5684 Query: 259 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 318 ||||||||||||||||||||||||| ||| | | |||||||| | |||||||||||| Sbjct: 5683 tctaggggtaaagcactgtttcggtataggccgtgtaagcggtacgacatcgaggcaaac 5624 Query: 319 tctgaatactagatatg 335 | ||||||||||||||| Sbjct: 5623 tatgaatactagatatg 5607 Score = 145 bits (73), Expect = 2e-31 Identities = 109/121 (90%) Strand = Plus / Minus Query: 358 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 417 |||| ||||||||||||||| |||||||||||||||||| |||||| |||||||| ||| Sbjct: 5602 ggtcagccagtgagacgatgagggataagcttcatcgtcaagaggggaacagcccagatt 5543 Query: 418 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 477 ||||| |||||||||||||||||||||||||||| ||||| || | ||||||||||||| Sbjct: 5542 accagataaggcccctaaatgaccgctcagtgatgaaggatgtatgagtgcaaagacagc 5483 Query: 478 c 478 | Sbjct: 5482 c 5482
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 436 bits (220), Expect = e-119 Identities = 228/231 (98%) Strand = Plus / Minus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 |||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 75090 ggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 75031 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75030 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 74971 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74970 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 74911 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 231 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74910 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 74860 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 394 gtcgagagggaaacagcccggatc 417 ||||||||||||||||||| |||| Sbjct: 401359 gtcgagagggaaacagcccagatc 401382
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 436 bits (220), Expect = e-119 Identities = 228/231 (98%) Strand = Plus / Plus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 |||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 382448 ggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 382507 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382508 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 382567 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382568 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 382627 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 231 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382628 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 382678 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 394 gtcgagagggaaacagcccggatc 417 ||||||||||||||||||| |||| Sbjct: 283060 gtcgagagggaaacagcccagatc 283037 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 394 gtcgagagggaaacagcccggatc 417 ||||||||||||||||||| |||| Sbjct: 154368 gtcgagagggaaacagcccagatc 154345
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 436 bits (220), Expect = e-119 Identities = 228/231 (98%) Strand = Plus / Minus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 |||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 113181 ggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 113122 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113121 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 113062 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113061 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 113002 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 231 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113001 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 112951 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 394 gtcgagagggaaacagcccggatc 417 ||||||||||||||||||| |||| Sbjct: 293993 gtcgagagggaaacagcccagatc 294016
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 436 bits (220), Expect = e-119 Identities = 231/235 (98%) Strand = Plus / Minus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 |||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 367863 ggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 367804 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367803 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 367744 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367743 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 367684 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 235 |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 367683 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaattcgtt 367629 Score = 436 bits (220), Expect = e-119 Identities = 231/235 (98%) Strand = Plus / Minus Query: 1 ggcttggttaagggaacggaacccaccggngccgtagcgaaagcgagtcttaatagggcg 60 |||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 184468 ggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 184409 Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184408 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 184349 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184348 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 184289 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 235 |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 184288 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaattcgtt 184234 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 394 gtcgagagggaaacagcccggatc 417 ||||||||||||||||||| |||| Sbjct: 266828 gtcgagagggaaacagcccagatc 266851
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 418 bits (211), Expect = e-114 Identities = 283/306 (92%), Gaps = 1/306 (0%) Strand = Plus / Plus Query: 26 ccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 85 |||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 747 ccggagccgtagcgaaagcgagtctttctagggcgaatgtcactgcttatggacccgaac 806 Query: 86 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 145 | |||||||||| ||||| ||||| |||||||||| |||| | ||| |||||||||||| Sbjct: 807 ccgggtgatctaaccatggccagggtgaagcttgggtgaagccaagtggaggtccgaacc 866 Query: 146 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 205 ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| | Sbjct: 867 gactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccactcgaactc 926 Query: 206 agagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctagg 264 ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 927 ggagctagctggttctccccgaaatgcgttgaggcgcagcggttgactggactgcctagg 986 Query: 265 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 324 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 987 ggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaa 1046 Query: 325 tactag 330 |||||| Sbjct: 1047 tactag 1052 Score = 161 bits (81), Expect = 3e-36 Identities = 111/121 (91%) Strand = Plus / Plus Query: 358 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 417 |||| |||||| ||||| ||||||||||||||||||||| ||||||||||||||| || | Sbjct: 1063 ggtcagccagtaagacggtgggggataagcttcatcgtcaagagggaaacagcccagacc 1122 Query: 418 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 477 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1123 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1182 Query: 478 c 478 | Sbjct: 1183 c 1183
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 418 bits (211), Expect = e-114 Identities = 283/306 (92%), Gaps = 1/306 (0%) Strand = Plus / Plus Query: 26 ccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 85 |||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 630 ccggagccgtagcgaaagcgagtctttctagggcgaatgtcactgcttatggacccgaac 689 Query: 86 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 145 | |||||||||| ||||| ||||| |||||||||| |||| | ||| |||||||||||| Sbjct: 690 ccgggtgatctaaccatggccagggtgaagcttgggtgaagccaagtggaggtccgaacc 749 Query: 146 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 205 ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| | Sbjct: 750 gactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccactcgaactc 809 Query: 206 agagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctagg 264 ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 810 ggagctagctggttctccccgaaatgcgttgaggcgcagcggttgactggactgcctagg 869 Query: 265 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 324 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 870 ggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaa 929 Query: 325 tactag 330 |||||| Sbjct: 930 tactag 935 Score = 168 bits (85), Expect = 1e-38 Identities = 112/121 (92%) Strand = Plus / Plus Query: 358 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 417 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 946 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1005 Query: 418 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 477 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1006 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1065 Query: 478 c 478 | Sbjct: 1066 c 1066
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 418 bits (211), Expect = e-114 Identities = 283/306 (92%), Gaps = 1/306 (0%) Strand = Plus / Plus Query: 26 ccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 85 |||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 643 ccggagccgtagcgaaagcgagtctttctagggcgaatgtcactgcttatggacccgaac 702 Query: 86 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 145 | |||||||||| ||||| ||||| |||||||||| |||| | ||| |||||||||||| Sbjct: 703 ccgggtgatctaaccatggccagggtgaagcttgggtgaagccaagtggaggtccgaacc 762 Query: 146 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 205 ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| | Sbjct: 763 gactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccactcgaactc 822 Query: 206 agagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctagg 264 ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 823 ggagctagctggttctccccgaaatgcgttgaggcgcagcggttgactggactgcctagg 882 Query: 265 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 324 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 883 ggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaa 942 Query: 325 tactag 330 |||||| Sbjct: 943 tactag 948 Score = 168 bits (85), Expect = 1e-38 Identities = 112/121 (92%) Strand = Plus / Plus Query: 358 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 417 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 959 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1018 Query: 418 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 477 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1019 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1078 Query: 478 c 478 | Sbjct: 1079 c 1079
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 412 bits (208), Expect = e-112 Identities = 356/403 (88%), Gaps = 3/403 (0%) Strand = Plus / Plus Query: 69 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 128 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 129 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 188 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 189 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 248 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 249 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 308 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 309 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 366 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 367 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 426 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 427 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 469 ||||||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 412 bits (208), Expect = e-112 Identities = 356/403 (88%), Gaps = 3/403 (0%) Strand = Plus / Plus Query: 69 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 128 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 129 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 188 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 189 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 248 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 249 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 308 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 309 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 366 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 367 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 426 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 427 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 469 ||||||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 412 bits (208), Expect = e-112 Identities = 356/403 (88%), Gaps = 3/403 (0%) Strand = Plus / Plus Query: 69 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 128 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 129 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 188 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 189 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 248 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 249 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 308 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 309 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 366 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 367 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 426 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 427 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 469 ||||||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 412 bits (208), Expect = e-112 Identities = 356/403 (88%), Gaps = 3/403 (0%) Strand = Plus / Plus Query: 69 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 128 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 129 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 188 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 189 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 248 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 249 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 308 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 309 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 366 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 367 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 426 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 427 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 469 ||||||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 412 bits (208), Expect = e-112 Identities = 356/403 (88%), Gaps = 3/403 (0%) Strand = Plus / Plus Query: 69 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 128 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 129 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 188 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 189 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 248 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 249 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 308 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 309 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 366 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 367 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 426 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 427 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 469 ||||||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 412 bits (208), Expect = e-112 Identities = 356/403 (88%), Gaps = 3/403 (0%) Strand = Plus / Plus Query: 69 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 128 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 129 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 188 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 189 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 248 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 249 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 308 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 309 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 366 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 367 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 426 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 427 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 469 ||||||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 412 bits (208), Expect = e-112 Identities = 356/403 (88%), Gaps = 3/403 (0%) Strand = Plus / Plus Query: 69 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 128 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 652 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 711 Query: 129 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 188 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 771 Query: 189 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 248 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 772 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 831 Query: 249 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 308 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 832 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 890 Query: 309 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 366 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 891 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 950 Query: 367 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 426 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 951 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1010 Query: 427 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 469 ||||||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1011 ggcccctaaatgaccactaagttataaaggaggtaggggtgca 1053
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 412 bits (208), Expect = e-112 Identities = 356/403 (88%), Gaps = 3/403 (0%) Strand = Plus / Plus Query: 69 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 128 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 129 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 188 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 189 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 248 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 249 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 308 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 309 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 366 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 367 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 426 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 427 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 469 ||||||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 412 bits (208), Expect = e-112 Identities = 356/403 (88%), Gaps = 3/403 (0%) Strand = Plus / Plus Query: 69 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 128 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 129 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 188 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 189 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 248 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 249 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 308 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 309 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 366 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 367 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 426 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 427 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 469 ||||||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 412 bits (208), Expect = e-112 Identities = 356/403 (88%), Gaps = 3/403 (0%) Strand = Plus / Plus Query: 69 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 128 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 129 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 188 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 189 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 248 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 249 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 308 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 309 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 366 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 367 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 426 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 427 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 469 ||||||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 412 bits (208), Expect = e-112 Identities = 356/403 (88%), Gaps = 3/403 (0%) Strand = Plus / Plus Query: 69 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 128 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 129 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 188 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 189 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 248 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 249 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 308 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 309 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 366 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 367 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 426 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 427 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 469 ||||||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 412 bits (208), Expect = e-112 Identities = 356/403 (88%), Gaps = 3/403 (0%) Strand = Plus / Plus Query: 69 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 128 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 129 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 188 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 189 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 248 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 249 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 308 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 309 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 366 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 367 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 426 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 427 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 469 ||||||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 404 bits (204), Expect = e-109 Identities = 355/403 (88%), Gaps = 3/403 (0%) Strand = Plus / Plus Query: 69 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 128 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 652 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 711 Query: 129 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 188 ||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 712 aagtggaggtccgaacagattgatgttgaagaatcagcggatgagttgtggttaggggtg 771 Query: 189 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 248 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 772 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 831 Query: 249 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 308 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 832 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 890 Query: 309 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 366 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 891 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 950 Query: 367 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 426 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 951 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1010 Query: 427 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 469 ||||||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1011 ggcccctaaatgaccactaagttataaaggaggtaggggtgca 1053
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 404 bits (204), Expect = e-109 Identities = 356/403 (88%), Gaps = 4/403 (0%) Strand = Plus / Plus Query: 69 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 128 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 129 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 188 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 189 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 248 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagc-gt 831 Query: 249 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 308 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 832 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 890 Query: 309 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 366 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 891 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 950 Query: 367 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 426 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 951 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1010 Query: 427 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 469 ||||||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1011 ggcccctaaatgaccactaagttataaaggaggtaggggtgca 1053
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 404 bits (204), Expect = e-109 Identities = 355/403 (88%), Gaps = 3/403 (0%) Strand = Plus / Plus Query: 69 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 128 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 129 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 188 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 189 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 248 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| || || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagtcgt 832 Query: 249 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 308 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 309 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 366 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 367 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 426 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 427 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 469 ||||||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 404 bits (204), Expect = e-109 Identities = 288/315 (91%), Gaps = 1/315 (0%) Strand = Plus / Plus Query: 23 ccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 82 ||||||| ||| |||||||||| |||||| ||||||| | ||||| |||||||| ||||| Sbjct: 644 ccaccggagccatagcgaaagcaagtcttcatagggcaaatgtcattgcttatgtacccg 703 Query: 83 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 142 ||| ||||||||||| |||||||||||||||| |||| |||||||||| ||||||||| Sbjct: 704 aacttgggtgatctaaccatgaccaggatgaaatttggttgaaactaagtggaggtccga 763 Query: 143 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 764 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccaatcgaa 823 Query: 203 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatcta 262 |||| |||||||||||||||||||||||||||| ||| ||||||||| || ||||||||| Sbjct: 824 cccaaagctagctggttctccccgaaatgcgtttaggggcagcagtt-accggacatcta 882 Query: 263 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 322 |||||||||||||||||||||||||| || |||||||||||||| |||||||||| || Sbjct: 883 ggggtaaagcactgtttcggtgcgggtctcgagagcggtaccaaattgaggcaaactatg 942 Query: 323 aatactagatatgac 337 ||||||||||||||| Sbjct: 943 aatactagatatgac 957 Score = 168 bits (85), Expect = 1e-38 Identities = 109/117 (93%) Strand = Plus / Plus Query: 362 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 421 |||||||||||| |||||||||||||||||||||| |||||| |||||||| |||||||| Sbjct: 1000 ggccagtgagaccatgggggataagcttcatcgtcaagaggggaacagcccagatcacca 1059 Query: 422 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||| ||| ||||||||||| |||||||| |||||||| Sbjct: 1060 gctaaggcccctaaatgaccgctaagttataaaggaggtaggggtgcatagacagcc 1116
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 404 bits (204), Expect = e-109 Identities = 292/319 (91%), Gaps = 2/319 (0%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||| |||||| ||| |||||||||| |||||| |||||||||||||||| |||||| Sbjct: 624 ggaatccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttatgg 682 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| |||| Sbjct: 683 acccgaacccgggtgatctatccatgaccaggatgaagcttgggtgaaaccaagtggagg 742 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 743 tccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccac 802 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||| | ||||||||||||||||||||||||||||||||||||||| ||| | ||| | Sbjct: 803 tcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgggc 862 Query: 258 -atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 316 || ||||||||||||||||||||||||||||||||| |||||||||||||||| |||| Sbjct: 863 tatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaa 922 Query: 317 actctgaatactagatatg 335 ||||||||||||| ||||| Sbjct: 923 actctgaatactaaatatg 941 Score = 103 bits (52), Expect = 5e-19 Identities = 100/116 (86%) Strand = Plus / Plus Query: 363 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 422 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 423 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagcc 1066
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 404 bits (204), Expect = e-109 Identities = 292/319 (91%), Gaps = 2/319 (0%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||| |||||| ||| |||||||||| |||||| |||||||||||||||| |||||| Sbjct: 3658 ggaatccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttatgg 3716 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| |||| Sbjct: 3717 acccgaacccgggtgatctatccatgaccaggatgaagcttgggtgaaaccaagtggagg 3776 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 3777 tccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccac 3836 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||| | ||||||||||||||||||||||||||||||||||||||| ||| | ||| | Sbjct: 3837 tcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgggc 3896 Query: 258 -atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 316 || ||||||||||||||||||||||||||||||||| |||||||||||||||| |||| Sbjct: 3897 tatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaa 3956 Query: 317 actctgaatactagatatg 335 ||||||||||||| ||||| Sbjct: 3957 actctgaatactaaatatg 3975 Score = 103 bits (52), Expect = 5e-19 Identities = 100/116 (86%) Strand = Plus / Plus Query: 363 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 422 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 3985 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 4044 Query: 423 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||| Sbjct: 4045 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagcc 4100
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 398 bits (201), Expect = e-108 Identities = 283/308 (91%), Gaps = 2/308 (0%) Strand = Plus / Plus Query: 24 caccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccga 83 |||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 630 caccggagccgtagcgaaagcgagtct-aacagggcgattgtcactgcttatggacccga 688 Query: 84 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 143 ||| |||||||||||||||| |||||||||||||||| |||||| ||| |||||||||| Sbjct: 689 acccgggtgatctatccatggccaggatgaagcttgggtgaaaccaagtggaggtccgaa 748 Query: 144 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 203 ||||||||||||||| |||||||||||||| ||||||||| |||||||| ||| |||||| Sbjct: 749 ccgactgatgttgaaaaatcagcggatgagctgtggttagcggtgaaataccaatcgaac 808 Query: 204 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atcta 262 | ||||||||||||||||||||||||||||||||||||||| ||| | ||| | ||| Sbjct: 809 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaattgggctgccta 868 Query: 263 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 322 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 869 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctg 928 Query: 323 aatactag 330 |||||||| Sbjct: 929 aatactag 936 Score = 151 bits (76), Expect = 2e-33 Identities = 106/116 (91%) Strand = Plus / Plus Query: 363 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 422 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 953 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 1012 Query: 423 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||| Sbjct: 1013 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagcc 1068
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 396 bits (200), Expect = e-107 Identities = 354/403 (87%), Gaps = 3/403 (0%) Strand = Plus / Plus Query: 69 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 128 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 129 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 188 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 189 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 248 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 249 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 308 | | || ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 atccag-acctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 309 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 366 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 367 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 426 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 427 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 469 ||||||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 396 bits (200), Expect = e-107 Identities = 291/319 (91%), Gaps = 2/319 (0%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||| |||||| ||| |||||||||| |||||| |||||||||||||||| |||||| Sbjct: 624 ggaatccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttatgg 682 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||| ||||||||||||||||||||||||||||||||| | |||| ||| |||| Sbjct: 683 acccgaacccgggtgatctatccatgaccaggatgaagcttgggtaaaaccaagtggagg 742 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 743 tccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccac 802 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||| | ||||||||||||||||||||||||||||||||||||||| ||| | ||| | Sbjct: 803 tcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgggc 862 Query: 258 -atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 316 || ||||||||||||||||||||||||||||||||| |||||||||||||||| |||| Sbjct: 863 tatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaa 922 Query: 317 actctgaatactagatatg 335 ||||||||||||| ||||| Sbjct: 923 actctgaatactaaatatg 941 Score = 103 bits (52), Expect = 5e-19 Identities = 100/116 (86%) Strand = Plus / Plus Query: 363 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 422 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 423 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagcc 1066
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 392 bits (198), Expect = e-106 Identities = 215/221 (97%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 595 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 654 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 655 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 714 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 715 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 774 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgag 238 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 775 tcgaacccagagctagctggttctccccgaaatgcgttgag 815
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 387 bits (195), Expect = e-104 Identities = 212/218 (97%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 81 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 140 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 141 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 200 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 201 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 260 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgtt 235 |||||||||||||||||||||||||||||||||||||| Sbjct: 261 tcgaacccagagctagctggttctccccgaaatgcgtt 298 Score = 373 bits (188), Expect = e-100 Identities = 209/216 (96%) Strand = Plus / Plus Query: 253 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 312 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 317 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 376 Query: 313 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 372 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 377 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 436 Query: 373 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 496 Query: 433 taaatgaccgctcagtgataaaggaggtgggggtgc 468 ||||||| |||||||||||||||||||| ||||||| Sbjct: 497 taaatgatcgctcagtgataaaggaggtaggggtgc 532
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 383 bits (193), Expect = e-103 Identities = 281/308 (91%), Gaps = 2/308 (0%) Strand = Plus / Minus Query: 24 caccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccga 83 |||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 124635 caccggagccgtagcgaaagcgagtct-aacagggcgattgtcactgcttatggacccga 124577 Query: 84 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 143 ||| |||||||||||||||| |||||||||||||||| |||| | ||| |||||||||| Sbjct: 124576 acccgggtgatctatccatggccaggatgaagcttgggtgaagccaagtggaggtccgaa 124517 Query: 144 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 203 ||||||||||||||| |||||||||||||| ||||||||| |||||||| ||| |||||| Sbjct: 124516 ccgactgatgttgaaaaatcagcggatgagctgtggttagcggtgaaataccaatcgaac 124457 Query: 204 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atcta 262 | ||||||||||||||||||||||||||||||||||||||| ||| | ||| | ||| Sbjct: 124456 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaattgggctgccta 124397 Query: 263 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 322 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 124396 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgagtcaaactctg 124337 Query: 323 aatactag 330 |||||||| Sbjct: 124336 aatactag 124329 Score = 383 bits (193), Expect = e-103 Identities = 281/308 (91%), Gaps = 2/308 (0%) Strand = Plus / Plus Query: 24 caccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccga 83 |||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 95231 caccggagccgtagcgaaagcgagtct-aacagggcgattgtcactgcttatggacccga 95289 Query: 84 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 143 ||| |||||||||||||||| |||||||||||||||| |||| | ||| |||||||||| Sbjct: 95290 acccgggtgatctatccatggccaggatgaagcttgggtgaagccaagtggaggtccgaa 95349 Query: 144 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 203 ||||||||||||||| |||||||||||||| ||||||||| |||||||| ||| |||||| Sbjct: 95350 ccgactgatgttgaaaaatcagcggatgagctgtggttagcggtgaaataccaatcgaac 95409 Query: 204 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atcta 262 | ||||||||||||||||||||||||||||||||||||||| ||| | ||| | ||| Sbjct: 95410 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaattgggctgccta 95469 Query: 263 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 322 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 95470 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgagtcaaactctg 95529 Query: 323 aatactag 330 |||||||| Sbjct: 95530 aatactag 95537 Score = 151 bits (76), Expect = 2e-33 Identities = 106/116 (91%) Strand = Plus / Minus Query: 363 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 422 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 124312 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 124253 Query: 423 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||| Sbjct: 124252 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagcc 124197 Score = 151 bits (76), Expect = 2e-33 Identities = 106/116 (91%) Strand = Plus / Plus Query: 363 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 422 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 95554 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 95613 Query: 423 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||| Sbjct: 95614 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagcc 95669
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 357 bits (180), Expect = 2e-95 Identities = 271/300 (90%), Gaps = 1/300 (0%) Strand = Plus / Plus Query: 35 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 94 |||||||||| |||||| ||||| |||||||||| |||||||||||||| ||||||| Sbjct: 651 tagcgaaagcaagtcttttcagggctattgtcactgtctatggacccgaacccgggtgat 710 Query: 95 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 154 ||| ||||| |||||||||||||||| |||||||||| ||||||| ||||||| ||||| Sbjct: 711 ctaaccatggccaggatgaagcttgggtgaaactaagtggaggtcccaaccgaccgatgt 770 Query: 155 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 214 |||| |||| ||||||||| ||||||||| ||||||||||||||||||| | |||||||| Sbjct: 771 tgaaaaatcggcggatgagctgtggttagtggtgaaatgccactcgaactcggagctagc 830 Query: 215 tggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagca 273 |||||||||||||||||||||||||||||||| || ||||||| ||| |||||||||||| Sbjct: 831 tggttctccccgaaatgcgttgaggcgcagcaattaactggactatccaggggtaaagca 890 Query: 274 ctgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagata 333 |||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||| Sbjct: 891 ctgtttcggtgcgggctgcgaaagcggtaccaaatcgagacaaactctgaatactggata 950 Score = 139 bits (70), Expect = 9e-30 Identities = 100/110 (90%) Strand = Plus / Plus Query: 366 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 425 ||||||||| | |||||||||||| |||||| ||||||||||||||| || ||||||||| Sbjct: 967 agtgagacggtaggggataagctttatcgtcaagagggaaacagcccagaccaccagcta 1026 Query: 426 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 475 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| Sbjct: 1027 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagaca 1076
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 355 bits (179), Expect = 8e-95 Identities = 278/309 (89%), Gaps = 3/309 (0%) Strand = Plus / Plus Query: 25 accggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 84 ||||| ||| |||||||||||||||||||||||||||| ||||||| ||| |||||||| Sbjct: 629 accggagccatagcgaaagcgagtcttaatagggcgat-gtcactgtctatagacccgaa 687 Query: 85 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 144 || |||||||||| ||||| |||||||||||||| | ||||||| || || |||||||| Sbjct: 688 cccgggtgatctaaccatggccaggatgaagctttggtgaaactcagtggaagtccgaac 747 Query: 145 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 204 |||| ||||||||| |||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 748 cgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaact 807 Query: 205 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact--ggacatcta 262 | ||||||||||||||||||||||||||||||||||||||| |||| | || |||| Sbjct: 808 cggagctagctggttctccccgaaatgcgttgaggcgcagcggttggatagggctttcta 867 Query: 263 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 322 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 868 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaaactctg 927 Query: 323 aatactaga 331 ||||||||| Sbjct: 928 aatactaga 936 Score = 135 bits (68), Expect = 1e-28 Identities = 101/112 (90%) Strand = Plus / Plus Query: 364 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 423 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 952 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1011 Query: 424 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 475 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| Sbjct: 1012 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagaca 1063
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 355 bits (179), Expect = 8e-95 Identities = 278/309 (89%), Gaps = 3/309 (0%) Strand = Plus / Minus Query: 25 accggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 84 ||||| ||| |||||||||||||||||||||||||||| ||||||| ||| |||||||| Sbjct: 115033 accggagccatagcgaaagcgagtcttaatagggcgat-gtcactgtctatagacccgaa 114975 Query: 85 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 144 || |||||||||| ||||| |||||||||||||| | ||||||| || || |||||||| Sbjct: 114974 cccgggtgatctaaccatggccaggatgaagctttggtgaaactcagtggaagtccgaac 114915 Query: 145 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 204 |||| ||||||||| |||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 114914 cgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaact 114855 Query: 205 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact--ggacatcta 262 | ||||||||||||||||||||||||||||||||||||||| |||| | || |||| Sbjct: 114854 cggagctagctggttctccccgaaatgcgttgaggcgcagcggttggatagggctttcta 114795 Query: 263 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 322 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 114794 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaaactctg 114735 Query: 323 aatactaga 331 ||||||||| Sbjct: 114734 aatactaga 114726 Score = 355 bits (179), Expect = 8e-95 Identities = 278/309 (89%), Gaps = 3/309 (0%) Strand = Plus / Plus Query: 25 accggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 84 ||||| ||| |||||||||||||||||||||||||||| ||||||| ||| |||||||| Sbjct: 86955 accggagccatagcgaaagcgagtcttaatagggcgat-gtcactgtctatagacccgaa 87013 Query: 85 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 144 || |||||||||| ||||| |||||||||||||| | ||||||| || || |||||||| Sbjct: 87014 cccgggtgatctaaccatggccaggatgaagctttggtgaaactcagtggaagtccgaac 87073 Query: 145 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 204 |||| ||||||||| |||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 87074 cgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaact 87133 Query: 205 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact--ggacatcta 262 | ||||||||||||||||||||||||||||||||||||||| |||| | || |||| Sbjct: 87134 cggagctagctggttctccccgaaatgcgttgaggcgcagcggttggatagggctttcta 87193 Query: 263 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 322 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 87194 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaaactctg 87253 Query: 323 aatactaga 331 ||||||||| Sbjct: 87254 aatactaga 87262 Score = 135 bits (68), Expect = 1e-28 Identities = 101/112 (90%) Strand = Plus / Minus Query: 364 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 423 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 114710 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 114651 Query: 424 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 475 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| Sbjct: 114650 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagaca 114599 Score = 135 bits (68), Expect = 1e-28 Identities = 101/112 (90%) Strand = Plus / Plus Query: 364 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 423 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 87278 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 87337 Query: 424 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 475 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| Sbjct: 87338 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagaca 87389
>gb|DQ078770.1| Zea mays clone Zmcoi6.13 cold-inducible unknown mRNA Length = 519 Score = 351 bits (177), Expect = 1e-93 Identities = 177/177 (100%) Strand = Plus / Minus Query: 302 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 460 Query: 362 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 400 Query: 422 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 399 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 343
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 349 bits (176), Expect = 5e-93 Identities = 275/307 (89%), Gaps = 1/307 (0%) Strand = Plus / Plus Query: 23 ccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 82 ||||||| ||| |||||||||| |||||| |||||| |||||||||| |||||||||| Sbjct: 4677 ccaccggagccatagcgaaagcaagtctttttagggctattgtcactgtctatggacccg 4736 Query: 83 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 142 |||| |||||||||| ||||| |||||||||||||||| | |||||||| ||||||| | Sbjct: 4737 aacccgggtgatctaaccatggccaggatgaagcttgggtaaaactaagtggaggtccaa 4796 Query: 143 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 202 |||||| ||||||||| |||| ||||||||| ||||||||| |||||||||||||||||| Sbjct: 4797 accgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaaatgccactcgaa 4856 Query: 203 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atct 261 | | |||||||||||||||||||||||||||||||||||||||| || |||| || ||| Sbjct: 4857 ctcggagctagctggttctccccgaaatgcgttgaggcgcagcaattaactgcactatcc 4916 Query: 262 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 321 ||||||||||||||||||||||||||||| || || ||||||||||||||||||||||| Sbjct: 4917 aggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatcgaggcaaactct 4976 Query: 322 gaatact 328 ||||||| Sbjct: 4977 gaatact 4983 Score = 139 bits (70), Expect = 9e-30 Identities = 100/110 (90%) Strand = Plus / Plus Query: 366 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 425 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 5005 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 5064 Query: 426 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 475 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| Sbjct: 5065 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagaca 5114
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 349 bits (176), Expect = 5e-93 Identities = 275/307 (89%), Gaps = 1/307 (0%) Strand = Plus / Plus Query: 23 ccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 82 ||||||| ||| |||||||||| |||||| |||||| |||||||||| |||||||||| Sbjct: 644 ccaccggagccatagcgaaagcaagtctttttagggctattgtcactgtctatggacccg 703 Query: 83 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 142 |||| |||||||||| ||||| |||||||||||||||| | |||||||| ||||||| | Sbjct: 704 aacccgggtgatctaaccatggccaggatgaagcttgggtaaaactaagtggaggtccaa 763 Query: 143 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 202 |||||| ||||||||| |||| ||||||||| ||||||||| |||||||||||||||||| Sbjct: 764 accgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaaatgccactcgaa 823 Query: 203 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atct 261 | | |||||||||||||||||||||||||||||||||||||||| || |||| || ||| Sbjct: 824 ctcggagctagctggttctccccgaaatgcgttgaggcgcagcaattaactgcactatcc 883 Query: 262 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 321 ||||||||||||||||||||||||||||| || || ||||||||||||||||||||||| Sbjct: 884 aggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatcgaggcaaactct 943 Query: 322 gaatact 328 ||||||| Sbjct: 944 gaatact 950 Score = 139 bits (70), Expect = 9e-30 Identities = 100/110 (90%) Strand = Plus / Plus Query: 366 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 425 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 426 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 475 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagaca 1081
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 349 bits (176), Expect = 5e-93 Identities = 275/307 (89%), Gaps = 1/307 (0%) Strand = Plus / Plus Query: 23 ccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 82 ||||||| ||| |||||||||| |||||| |||||| |||||||||| |||||||||| Sbjct: 644 ccaccggagccatagcgaaagcaagtctttttagggctattgtcactgtctatggacccg 703 Query: 83 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 142 |||| |||||||||| ||||| |||||||||||||||| | |||||||| ||||||| | Sbjct: 704 aacccgggtgatctaaccatggccaggatgaagcttgggtaaaactaagtggaggtccaa 763 Query: 143 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 202 |||||| ||||||||| |||| ||||||||| ||||||||| |||||||||||||||||| Sbjct: 764 accgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaaatgccactcgaa 823 Query: 203 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atct 261 | | |||||||||||||||||||||||||||||||||||||||| || |||| || ||| Sbjct: 824 ctcggagctagctggttctccccgaaatgcgttgaggcgcagcaattaactgcactatcc 883 Query: 262 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 321 ||||||||||||||||||||||||||||| || || ||||||||||||||||||||||| Sbjct: 884 aggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatcgaggcaaactct 943 Query: 322 gaatact 328 ||||||| Sbjct: 944 gaatact 950 Score = 131 bits (66), Expect = 2e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 366 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 425 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 426 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 475 ||||||||||||| ||||| |||| ||||| ||||||| ||||||||||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaagaaggtgggagtgcaaagaca 1081
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 347 bits (175), Expect = 2e-92 Identities = 275/307 (89%), Gaps = 1/307 (0%) Strand = Plus / Plus Query: 31 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 90 ||||||||||||||||||| | |||||| |||||||| ||||||||||||||| ||| Sbjct: 1039 gccgtagcgaaagcgagtcattcaagggcgcatgtcactgtttatggacccgaacccggg 1098 Query: 91 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 150 ||||||||||||| ||||| |||||||||| |||| | ||| |||| |||||||||||| Sbjct: 1099 tgatctatccatggccagggtgaagcttgggtgaagccaagtggaggcccgaaccgactg 1158 Query: 151 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 210 ||||||| || ||||||||||| ||||||||||||||||||||||||||||| | |||| Sbjct: 1159 gtgttgaaaaaccagcggatgagctgtggttaggggtgaaatgccactcgaactcggagc 1218 Query: 211 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaa 269 ||||||||||||||||||||||||||||||||||| |||||| || | ||||||||| Sbjct: 1219 tagctggttctccccgaaatgcgttgaggcgcagcgattgactaaactgtttaggggtaa 1278 Query: 270 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 329 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1279 agcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatacta 1338 Query: 330 gatatga 336 || |||| Sbjct: 1339 gacatga 1345 Score = 147 bits (74), Expect = 4e-32 Identities = 104/114 (91%) Strand = Plus / Plus Query: 365 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 424 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| ||||||||||| Sbjct: 1358 cagtgagacagtgggggataagctccattgtcaagagggaaacagcccagatcaccagct 1417 Query: 425 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||||| |||||||||| | |||||||||||||| Sbjct: 1418 aaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagcc 1471
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 345 bits (174), Expect = 8e-92 Identities = 275/306 (89%), Gaps = 2/306 (0%) Strand = Plus / Plus Query: 31 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 90 |||||||||||||| |||| | || |||| |||||||| |||| |||||||||| ||| Sbjct: 592 gccgtagcgaaagcaagtcat-atttggcgcatgtcactgtttatagacccgaacccggg 650 Query: 91 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 150 ||||||||||||| ||||| |||| ||||| |||| | ||| ||||||||||||||||| Sbjct: 651 tgatctatccatggccagggtgaaacttgggtgaagccaagtggaggtccgaaccgactg 710 Query: 151 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 210 |||||||| |||||||||||||| ||||||||||||||||||||||||||||| | |||| Sbjct: 711 atgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccactcgaactcggagc 770 Query: 211 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaa 269 ||||||||||||||||||||||||||||||||||| |||| ||||| | ||||||||| Sbjct: 771 tagctggttctccccgaaatgcgttgaggcgcagcgattgattggactacttaggggtaa 830 Query: 270 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 329 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 831 agcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatacta 890 Query: 330 gatatg 335 | |||| Sbjct: 891 ggtatg 896 Score = 165 bits (83), Expect = 2e-37 Identities = 104/111 (93%) Strand = Plus / Plus Query: 365 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 424 |||||||||| ||||||||||||||||||||| | ||||||||||||| |||||| |||| Sbjct: 912 cagtgagacggtgggggataagcttcatcgtcaaaagggaaacagcccagatcactagct 971 Query: 425 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 475 |||||||| |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 972 aaggccccaaaatgaccgctcagtgataaaggaggtgggagtgcaaagaca 1022
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 333 bits (168), Expect = 3e-88 Identities = 270/301 (89%), Gaps = 6/301 (1%) Strand = Plus / Plus Query: 36 agcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacctgggtga 93 ||||||||||||||| |||||||| || |||||| ||||||||||||||| |||||| Sbjct: 642 agcgaaagcgagtctgaatagggcacttttgtcactttttatggacccgaacccgggtga 701 Query: 94 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 153 |||| |||||||||||||||||||||| | |||| ||| ||||||||||||||| |||| Sbjct: 702 tctaaccatgaccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatg 761 Query: 154 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 213 ||||| |||| |||||||||||||||||||||||||||||||| |||||| | ||||||| Sbjct: 762 ttgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaactcggagctag 821 Query: 214 ctggttctccccgaaatgcgttgaggcgcagcagttgac---tggac-atctaggggtaa 269 |||||||||||||||||||||||||||||||| |||||| ||| | |||||||||||| Sbjct: 822 ctggttctccccgaaatgcgttgaggcgcagcggttgacgaatgggctatctaggggtaa 881 Query: 270 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 329 |||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||| Sbjct: 882 agcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaagaatacta 941 Query: 330 g 330 | Sbjct: 942 g 942 Score = 163 bits (82), Expect = 6e-37 Identities = 94/98 (95%) Strand = Plus / Plus Query: 364 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 423 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 960 ccagtgagacgatgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1019 Query: 424 taaggcccctaaatgaccgctcagtgataaaggaggtg 461 ||||||||||||||| ||||| |||||||||||||||| Sbjct: 1020 taaggcccctaaatggccgctaagtgataaaggaggtg 1057
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 329 bits (166), Expect = 5e-87 Identities = 269/300 (89%), Gaps = 5/300 (1%) Strand = Plus / Plus Query: 36 agcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacctgggtga 93 ||||||||| |||||||||||||||||| |||||| ||||||||||||||| |||||| Sbjct: 706 agcgaaagcaagtcttaatagggcgattttgtcactttttatggacccgaacccgggtga 765 Query: 94 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 153 |||| |||||||||||||||||||||| | |||| ||| || |||||||||||| |||| Sbjct: 766 tctaaccatgaccaggatgaagcttgggtaaaaccaagtggaagtccgaaccgaccgatg 825 Query: 154 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 213 ||||| |||| |||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 826 ttgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaacccggagctag 885 Query: 214 ctggttctccccgaaatgcgttgaggcgcagcagttga--ctg-gacatctaggggtaaa 270 |||||||||||||||||||||||||||||||| ||||| || | |||||||||||| Sbjct: 886 ctggttctccccgaaatgcgttgaggcgcagcggttgatgttgagctgtctaggggtaaa 945 Query: 271 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 330 ||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||| Sbjct: 946 gcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaagaatactag 1005 Score = 115 bits (58), Expect = 1e-22 Identities = 88/98 (89%) Strand = Plus / Plus Query: 364 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 423 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 1023 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 1082 Query: 424 taaggcccctaaatgaccgctcagtgataaaggaggtg 461 |||||||||| |||| ||||| |||| |||||||||| Sbjct: 1083 taaggcccctgaatggccgctaagtggcaaaggaggtg 1120
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 325 bits (164), Expect = 8e-86 Identities = 278/315 (88%), Gaps = 1/315 (0%) Strand = Plus / Plus Query: 23 ccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 82 ||||||| ||| |||||||||| |||||| |||||| | ||||| ||||| |||||||| Sbjct: 619 ccaccggagccatagcgaaagcaagtcttcatagggaaaatgtcattgcttgtggacccg 678 Query: 83 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 142 ||| ||||||||||| |||||||||||||| | |||| | |||||||| | |||| || Sbjct: 679 aacttgggtgatctaaccatgaccaggatgcaatttggttaaaactaagtgggggtctga 738 Query: 143 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 739 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccaatcgaa 798 Query: 203 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatcta 262 |||| ||||||||||||| ||||||||||| || ||||||||||||| || || |||||| Sbjct: 799 cccaaagctagctggttcgccccgaaatgcatttaggcgcagcagtt-accgggcatcta 857 Query: 263 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 322 ||||||||||| ||||| |||||||| || |||||||||||||| |||||| ||| || Sbjct: 858 ggggtaaagcattgttttggtgcgggtcacgagagcggtaccaaattgaggcagactatg 917 Query: 323 aatactagatatgac 337 ||||||||||||||| Sbjct: 918 aatactagatatgac 932 Score = 121 bits (61), Expect = 2e-24 Identities = 106/121 (87%) Strand = Plus / Plus Query: 340 aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgag 399 ||||||||||||| | | ||| | |||||||||| | ||||||||||||||||||||||| Sbjct: 944 aaaaataacagggataagggtggaccagtgagaccacgggggataagcttcatcgtcgag 1003 Query: 400 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 459 |||| |||| || |||||| ||||||| |||||||||||||||| ||| |||||||||| Sbjct: 1004 aggggaacattccagatcactagctaagccccctaaatgaccgctaagttataaaggagg 1063 Query: 460 t 460 | Sbjct: 1064 t 1064
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 323 bits (163), Expect = 3e-85 Identities = 269/303 (88%), Gaps = 1/303 (0%) Strand = Plus / Plus Query: 35 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 94 |||||||||| |||| || | ||||| |||||||| ||||||||||||||| ||||||| Sbjct: 602 tagcgaaagcaagtcataccaaggcgaatgtcactgtttatggacccgaacccgggtgat 661 Query: 95 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 154 ||||||||| ||||||||||| |||| |||||| || ||||||||||||||||| ||| Sbjct: 662 ctatccatggccaggatgaagtttgggtgaaaccaaatggaggtccgaaccgactggtgt 721 Query: 155 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 214 |||| || || |||||||| ||||| ||||||||||||||||||||||| | |||||||| Sbjct: 722 tgaaaaaccaacggatgagctgtggataggggtgaaatgccactcgaactcggagctagc 781 Query: 215 tggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagca 273 ||||||||||||||||||||||||||||||| ||||||| ||| || ||||||||||||| Sbjct: 782 tggttctccccgaaatgcgttgaggcgcagcggttgactagactatttaggggtaaagca 841 Query: 274 ctgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagata 333 |||||||||||||||||| | | ||||||||||| || ||||||||||||||||| ||| Sbjct: 842 ctgtttcggtgcgggctgtgaaaacggtaccaaattgatgcaaactctgaatactaaata 901 Query: 334 tga 336 ||| Sbjct: 902 tga 904 Score = 159 bits (80), Expect = 1e-35 Identities = 107/116 (92%) Strand = Plus / Plus Query: 363 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 422 |||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||| Sbjct: 915 gccagtgagacggtgggggataagctccatcgtcgaaagggaaacagcccagatcaccag 974 Query: 423 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||| |||||||||||| ||| | |||||||||||||| Sbjct: 975 ttaaggcccctaaatgaccgctaagtgataaaggatgtgagagtgcaaagacagcc 1030
>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full insert sequence Length = 2146 Score = 315 bits (159), Expect = 7e-83 Identities = 159/159 (100%) Strand = Plus / Plus Query: 320 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 60 Query: 380 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 120 Query: 440 ccgctcagtgataaaggaggtgggggtgcaaagacagcc 478 ||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgctcagtgataaaggaggtgggggtgcaaagacagcc 159
>gb|AC147496.19| Medicago truncatula clone mth2-6i7, complete sequence Length = 148736 Score = 311 bits (157), Expect = 1e-81 Identities = 190/201 (94%) Strand = Plus / Minus Query: 134 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 193 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct: 141909 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatg 141850 Query: 194 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 253 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 141849 ccactcgaacccagagctagctggttctccctgaaatgcgttgaggcgcagcagttgact 141790 Query: 254 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 313 |||||| ||||||||||||| |||||||| ||||| ||| ||||||| ||||||||||| Sbjct: 141789 ggacatttaggggtaaagcattgtttcggcacgggccgcgggagcggttccaaatcgagg 141730 Query: 314 caaactctgaatactagatat 334 ||||||||||||| ||||||| Sbjct: 141729 caaactctgaatattagatat 141709
>gb|DQ160149.1| Taraxacum officinale To116-3 mRNA, partial sequence Length = 187 Score = 309 bits (156), Expect = 4e-81 Identities = 173/179 (96%) Strand = Plus / Plus Query: 18 ggaacccaccggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 77 |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 5 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 64 Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 65 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 124 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 196 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 183
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 307 bits (155), Expect = 2e-80 Identities = 265/299 (88%), Gaps = 2/299 (0%) Strand = Plus / Plus Query: 36 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 95 ||||||||| |||||||||||||| |||||| ||||||||||||||| |||||||| Sbjct: 790 agcgaaagcaagtcttaatagggctcaggtcactctttatggacccgaacccgggtgatc 849 Query: 96 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 155 || |||||||||||||||||||| | | |||| || || |||||||||||| |||||| Sbjct: 850 taaccatgaccaggatgaagcttcggtaaaacggagtggaagtccgaaccgaccgatgtt 909 Query: 156 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 215 ||| |||| |||||||||||||||||||||||||||||||| |||||| | ||||||||| Sbjct: 910 gaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaactcggagctagct 969 Query: 216 ggttctccccgaaatgcgttgaggcgcagcagttgac-tggac-atctaggggtaaagca 273 |||||||||||||||||||||||||||||| ||| || ||| | ||||||||||||||| Sbjct: 970 ggttctccccgaaatgcgttgaggcgcagcggttaacgtgggcggtctaggggtaaagca 1029 Query: 274 ctgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 332 |||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||| Sbjct: 1030 ctgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaagaatactagat 1088 Score = 139 bits (70), Expect = 9e-30 Identities = 91/98 (92%) Strand = Plus / Plus Query: 364 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 423 ||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 1103 ccagtgagacggtgggggataagcttcatcgtcgaaagggaaacagcccagatcaccagc 1162 Query: 424 taaggcccctaaatgaccgctcagtgataaaggaggtg 461 |||||||||| |||| ||||| |||| ||||||||||| Sbjct: 1163 taaggcccctcaatggccgctaagtggtaaaggaggtg 1200
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 307 bits (155), Expect = 2e-80 Identities = 246/274 (89%), Gaps = 3/274 (1%) Strand = Plus / Plus Query: 61 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 120 ||||||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||| Sbjct: 800 attgtcacttcttatggacccgaacccgggtgatctaaccatggccaggatgaagcttgg 859 Query: 121 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 180 | |||| ||| ||||||||||||||| ||||||||| |||| |||||||||||||||| Sbjct: 860 gtaaaaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggt 919 Query: 181 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 240 |||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 920 taggggtgaaatgccaatcgaacctggagctagctggatctccccgaaatgcgttgaggc 979 Query: 241 gcagcagttgac--tggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgag 297 ||||| ||| || ||| | ||||||||||||||||||||||||||||||||||| ||| Sbjct: 980 gcagcggttaacgatgggctgtctaggggtaaagcactgtttcggtgcgggctgcgagag 1039 Query: 298 cggtaccaaatcgaggcaaactctgaatactaga 331 ||||||||||||| ||||||| |||||||||| Sbjct: 1040 cggtaccaaatcgtagcaaactaagaatactaga 1073 Score = 131 bits (66), Expect = 2e-27 Identities = 81/86 (94%) Strand = Plus / Plus Query: 364 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 423 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 1090 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1149 Query: 424 taaggcccctaaatgaccgctcagtg 449 ||||||||| ||||||||||| |||| Sbjct: 1150 taaggccccaaaatgaccgctaagtg 1175
>emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast partial genome Length = 22085 Score = 299 bits (151), Expect = 4e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 77 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 136 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 6375 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 6434 Query: 137 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 196 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 6435 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 6494 Query: 197 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 255 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 6495 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 6554 Query: 256 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 314 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 6555 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 6614 Query: 315 aaactctgaatactagatatgac 337 ||||||||||||||||| ||||| Sbjct: 6615 aaactctgaatactagaaatgac 6637 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 366 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 425 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 6646 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 6705 Query: 426 aggcccctaaatg 438 ||||||| ||||| Sbjct: 6706 aggccccaaaatg 6718 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 31 gccgtagcgaaagcgagtcttaatagggcgat 62 |||||||| ||||||||||| ||||||||||| Sbjct: 6305 gccgtagcaaaagcgagtctgaatagggcgat 6336
>emb|AJ222802.1|CHPW5KB Prototheca wickerhamii 5.0 kb plastid DNA fragment of ribosomal RNA genecluster Length = 5001 Score = 299 bits (151), Expect = 4e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 77 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 136 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 3438 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 3497 Query: 137 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 196 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 3498 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 3557 Query: 197 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 255 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 3558 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 3617 Query: 256 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 314 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 3618 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 3677 Query: 315 aaactctgaatactagatatgac 337 ||||||||||||||||| ||||| Sbjct: 3678 aaactctgaatactagaaatgac 3700 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 366 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 425 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 3709 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 3768 Query: 426 aggcccctaaatg 438 ||||||| ||||| Sbjct: 3769 aggccccaaaatg 3781 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 31 gccgtagcgaaagcgagtcttaatagggcgat 62 |||||||| ||||||||||| ||||||||||| Sbjct: 3368 gccgtagcaaaagcgagtctgaatagggcgat 3399
>gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2715 Score = 299 bits (151), Expect = 4e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 77 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 136 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 726 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 785 Query: 137 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 196 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 786 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 845 Query: 197 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 255 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 846 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 905 Query: 256 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 314 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 906 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 965 Query: 315 aaactctgaatactagatatgac 337 ||||||||||||||||| ||||| Sbjct: 966 aaactctgaatactagaaatgac 988 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 366 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 425 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 997 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 1056 Query: 426 aggcccctaaatg 438 ||||||| ||||| Sbjct: 1057 aggccccaaaatg 1069 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 31 gccgtagcgaaagcgagtcttaatagggcgat 62 |||||||| ||||||||||| ||||||||||| Sbjct: 656 gccgtagcaaaagcgagtctgaatagggcgat 687
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 287 bits (145), Expect = 2e-74 Identities = 240/271 (88%), Gaps = 3/271 (1%) Strand = Plus / Plus Query: 64 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 123 |||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||| | Sbjct: 680 gtcacttcttatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggta 739 Query: 124 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 183 |||| ||| || |||||||||||| ||||||||| |||| ||||||||| ||||||||| Sbjct: 740 aaaccaagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttag 799 Query: 184 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 243 ||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 800 gggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgca 859 Query: 244 gcagt---tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 || || ||| || ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 860 gcggttaatgatgggcggtctaggggtaaagcactgtttcggtgcgggctgcgagagcgg 919 Query: 301 taccaaatcgaggcaaactctgaatactaga 331 |||||||||| ||||||| |||||||||| Sbjct: 920 taccaaatcgtagcaaactaagaatactaga 950 Score = 163 bits (82), Expect = 6e-37 Identities = 94/98 (95%) Strand = Plus / Plus Query: 364 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 423 ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 966 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccagc 1025 Query: 424 taaggcccctaaatgaccgctcagtgataaaggaggtg 461 ||||||||||||||||||||| |||| ||||||||||| Sbjct: 1026 taaggcccctaaatgaccgctaagtggtaaaggaggtg 1063
>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 34.90 Length = 4586 Score = 287 bits (145), Expect = 2e-74 Identities = 261/297 (87%), Gaps = 2/297 (0%) Strand = Plus / Plus Query: 35 tagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggacccgaacctgggtga 93 |||||||||||||| ||||||| ||| || |||||| |||| |||||||||| |||||| Sbjct: 2456 tagcgaaagcgagttttaatagagcgtttagtcactatttatagacccgaacccgggtga 2515 Query: 94 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 153 |||| ||||| ||||| |||||||| | | ||||||| |||| ||||||||| |||| Sbjct: 2516 tctaaccatggccagggtgaagcttaggtaaaactaaatggaggcccgaaccgatcgatg 2575 Query: 154 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 213 ||||| |||| ||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 2576 ttgaaaaatcgccggatgagttgtggttaggggtgaaatgccaatcgaacccggagctag 2635 Query: 214 ctggttctccccgaaatgcgttgaggcgcagcagttga-ctggacatctaggggtaaagc 272 |||||||||||||||||||||||||||||||| ||||| | || |||||||||||| Sbjct: 2636 ctggttctccccgaaatgcgttgaggcgcagcggttgatgttataatttaggggtaaagc 2695 Query: 273 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 329 |||||||||||||||||| || ||| ||||||||||||||||||||||||||||||| Sbjct: 2696 actgtttcggtgcgggctacgagagtggtaccaaatcgaggcaaactctgaatacta 2752 Score = 77.8 bits (39), Expect = 3e-11 Identities = 75/87 (86%) Strand = Plus / Plus Query: 376 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 435 ||||||||||||| ||| ||| ||||||||||||||| || ||||| ||||||||||||| Sbjct: 2778 tgggggataagctccattgtcaagagggaaacagcccagaccaccatctaaggcccctaa 2837 Query: 436 atgaccgctcagtgataaaggaggtgg 462 || | ||| |||| ||||||||||| Sbjct: 2838 ataatagctaagtgggaaaggaggtgg 2864
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 287 bits (145), Expect = 2e-74 Identities = 261/297 (87%), Gaps = 2/297 (0%) Strand = Plus / Minus Query: 35 tagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaacctgggtga 93 |||||||||||||| | |||| ||| |||||||| |||| |||||||||| |||||| Sbjct: 114792 tagcgaaagcgagtttgtatagagcgttttgtcactatttatagacccgaacccgggtga 114733 Query: 94 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 153 |||| ||||| ||||| |||||||||| | |||||||| |||| |||||| || | ||| Sbjct: 114732 tctaaccatggccagggtgaagcttgggtaaaactaagtggaggcccgaactgattaatg 114673 Query: 154 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 213 ||||| ||| | ||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 114672 ttgaaaaattaccggatgagttgtggttaggggtgaaatgccaatcgaacccggagctag 114613 Query: 214 ctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagc 272 |||||||||||||||||| ||||||||||||| ||||| | | | |||||||||||| Sbjct: 114612 ctggttctccccgaaatgtgttgaggcgcagcggttgagattataacttaggggtaaagc 114553 Query: 273 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 329 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 114552 actgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatacta 114496 Score = 287 bits (145), Expect = 2e-74 Identities = 261/297 (87%), Gaps = 2/297 (0%) Strand = Plus / Plus Query: 35 tagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaacctgggtga 93 |||||||||||||| | |||| ||| |||||||| |||| |||||||||| |||||| Sbjct: 2725 tagcgaaagcgagtttgtatagagcgttttgtcactatttatagacccgaacccgggtga 2784 Query: 94 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 153 |||| ||||| ||||| |||||||||| | |||||||| |||| |||||| || | ||| Sbjct: 2785 tctaaccatggccagggtgaagcttgggtaaaactaagtggaggcccgaactgattaatg 2844 Query: 154 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 213 ||||| ||| | ||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 2845 ttgaaaaattaccggatgagttgtggttaggggtgaaatgccaatcgaacccggagctag 2904 Query: 214 ctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagc 272 |||||||||||||||||| ||||||||||||| ||||| | | | |||||||||||| Sbjct: 2905 ctggttctccccgaaatgtgttgaggcgcagcggttgagattataacttaggggtaaagc 2964 Query: 273 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 329 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 2965 actgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatacta 3021 Score = 77.8 bits (39), Expect = 3e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 363 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 422 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 114483 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 114424 Query: 423 ctaaggcccctaaat 437 |||||||||||||| Sbjct: 114423 ttaaggcccctaaat 114409 Score = 77.8 bits (39), Expect = 3e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 363 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 422 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 3034 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 3093 Query: 423 ctaaggcccctaaat 437 |||||||||||||| Sbjct: 3094 ttaaggcccctaaat 3108
>gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2552 Score = 283 bits (143), Expect = 3e-73 Identities = 260/297 (87%), Gaps = 4/297 (1%) Strand = Plus / Plus Query: 36 agcgaaagcgagtcttaa-tagggcgattgtcactgcttatggacccgaacctgggtgat 94 ||||||||||||||| || || |||| | |||| | |||||||||||||||||||||||| Sbjct: 620 agcgaaagcgagtctgaaatacggcgctcgtcatttcttatggacccgaacctgggtgat 679 Query: 95 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 154 ||| ||||||||||| |||||||||| | |||| ||| || | ||||||| |||||||| Sbjct: 680 ctaaccatgaccagggtgaagcttgggtaaaaccaagtggaagcccgaacccactgatgt 739 Query: 155 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 214 |||| |||||| ||||||||||||||||| |||||||||||| |||||| |||||||||| Sbjct: 740 tgaaaaatcaggggatgagttgtggttagcggtgaaatgccaatcgaactcagagctagc 799 Query: 215 tggttctccccgaaatgcgttgaggcgcagc---agttgactggacatctaggggtaaag 271 ||| ||||||||||||||||||||||||||| ||||| || | || |||||||||| Sbjct: 800 tggatctccccgaaatgcgttgaggcgcagcggttgttgatgggtcgtcaaggggtaaag 859 Query: 272 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 328 |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||| Sbjct: 860 cactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaatact 916 Score = 107 bits (54), Expect = 3e-20 Identities = 69/74 (93%) Strand = Plus / Plus Query: 364 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 423 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 935 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 994 Query: 424 taaggcccctaaat 437 |||||||||||||| Sbjct: 995 taaggcccctaaat 1008
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 283 bits (143), Expect = 3e-73 Identities = 262/302 (86%) Strand = Plus / Plus Query: 27 cggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 86 ||| ||| |||||||||||||||| | |||||| | |||||| |||| |||||||||| Sbjct: 2189 cggagccatagcgaaagcgagtctgataagggcgttagtcactatttatagacccgaacc 2248 Query: 87 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 146 || ||||||| |||| |||||||||||||| | | | ||| || ||||||||||||| Sbjct: 2249 cggatgatctagtcatggccaggatgaagcttaggtaacactgagtggaggtccgaaccg 2308 Query: 147 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 206 |||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||| || Sbjct: 2309 actgatgttgaaaaatcagcggatgagttgtgattaggggtgaaatgccaatcgaatccg 2368 Query: 207 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 266 ||||||||||||||||||||||||||||||||||||||| ||| | | | | |||| Sbjct: 2369 gagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatttaagcttggggg 2428 Query: 267 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 326 ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 2429 taaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaactctgaata 2488 Query: 327 ct 328 || Sbjct: 2489 ct 2490 Score = 119 bits (60), Expect = 9e-24 Identities = 90/100 (90%) Strand = Plus / Plus Query: 364 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 423 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 2505 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 2564 Query: 424 taaggcccctaaatgaccgctcagtgataaaggaggtggg 463 |||||||||||||| | ||| |||||||||||||||||| Sbjct: 2565 taaggcccctaaataattgctaagtgataaaggaggtggg 2604
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 281 bits (142), Expect = 1e-72 Identities = 254/290 (87%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 39 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 98 |||| ||||||| |||||||||| ||||| |||| |||||||||| |||||||||| Sbjct: 262 gaaaccgagtctgaatagggcgaaagtcacattttatagacccgaacccgggtgatctaa 321 Query: 99 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 158 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatgtccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 159 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 218 |||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 382 aaatcagcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagctggt 441 Query: 219 tctccccgaaatgcgttgaggcgcagcagttgactggacatctag-gggtaaagcactgt 277 ||||||||||||| ||| ||||||||| || | |||||| |||||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaacgattaaatctagggggtaaagcactgt 501 Query: 278 ttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 327 |||||||||||||||| |||||||||||||||||| ||||||| |||||| Sbjct: 502 ttcggtgcgggctgcgagagcggtaccaaatcgagacaaactcagaatac 551 Score = 105 bits (53), Expect = 1e-19 Identities = 89/101 (88%) Strand = Plus / Plus Query: 363 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 422 |||||| ||||| || |||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 566 gccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccaccag 625 Query: 423 ctaaggcccctaaatgaccgctcagtgataaaggaggtggg 463 |||||| ||| ||||| ||| |||||||||||||||||| Sbjct: 626 ctaaggtcccaaaatggatgctaagtgataaaggaggtggg 666
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 281 bits (142), Expect = 1e-72 Identities = 230/258 (89%), Gaps = 1/258 (0%) Strand = Plus / Plus Query: 77 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 136 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 674 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaag 733 Query: 137 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 196 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 734 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 793 Query: 197 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 255 |||||| | ||||||||||||||||||||||||||||||||||||||| ||| | || Sbjct: 794 gtcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataagg 853 Query: 256 acatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 315 | ||||||||||||||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 854 ctgtttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggca 913 Query: 316 aactctgaatactagata 333 |||||||||||||||||| Sbjct: 914 aactctgaatactagata 931 Score = 133 bits (67), Expect = 6e-28 Identities = 91/99 (91%) Strand = Plus / Plus Query: 363 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 422 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 1003 Query: 423 ctaaggcccctaaatgaccgctcagtgataaaggaggtg 461 |||||||||| |||||| || | ||||| |||||||||| Sbjct: 1004 ctaaggccccaaaatgatcgttaagtgacaaaggaggtg 1042
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 281 bits (142), Expect = 1e-72 Identities = 265/304 (87%), Gaps = 4/304 (1%) Strand = Plus / Plus Query: 31 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 90 |||||||||||||||||||| |||||||||| |||||| |||| |||||||||| ||| Sbjct: 637 gccgtagcgaaagcgagtctgaatagggcgac-gtcactttttatagacccgaacccggg 695 Query: 91 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 150 ||||||| ||||| |||||||||||||||| | | | ||| ||||||||||||||| | Sbjct: 696 tgatctaaccatggccaggatgaagcttgggtaacaacaagtggaggtccgaaccgaccg 755 Query: 151 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 210 |||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | |||| Sbjct: 756 atgttgaaaaatcggcggatgagctgtggttaggggtgaaataccaatcgaactcggagc 815 Query: 211 tagctggttctccccgaaatgcgttgaggcgcagcagt---tgactggacatctaggggt 267 ||||||||||||||||||||||||||||||||||| || ||| || ||||||||| Sbjct: 816 tagctggttctccccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctaggggt 875 Query: 268 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 327 ||||| |||||||||||||||||||| ||||||||||||||| |||||||| |||||| Sbjct: 876 aaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaatac 935 Query: 328 taga 331 |||| Sbjct: 936 taga 939 Score = 123 bits (62), Expect = 6e-25 Identities = 89/98 (90%) Strand = Plus / Plus Query: 364 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 423 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 957 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 1016 Query: 424 taaggcccctaaatgaccgctcagtgataaaggaggtg 461 ||||||||||||||| ||||| |||| |||||||||| Sbjct: 1017 taaggcccctaaatggccgctaagtggcaaaggaggtg 1054
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 281 bits (142), Expect = 1e-72 Identities = 265/304 (87%), Gaps = 4/304 (1%) Strand = Plus / Plus Query: 31 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 90 |||||||||||||||||||| |||||||||| |||||| |||| |||||||||| ||| Sbjct: 2519 gccgtagcgaaagcgagtctgaatagggcgac-gtcactttttatagacccgaacccggg 2577 Query: 91 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 150 ||||||| ||||| |||||||||||||||| | | | ||| ||||||||||||||| | Sbjct: 2578 tgatctaaccatggccaggatgaagcttgggtaacaacaagtggaggtccgaaccgaccg 2637 Query: 151 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 210 |||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | |||| Sbjct: 2638 atgttgaaaaatcggcggatgagctgtggttaggggtgaaataccaatcgaactcggagc 2697 Query: 211 tagctggttctccccgaaatgcgttgaggcgcagcagt---tgactggacatctaggggt 267 ||||||||||||||||||||||||||||||||||| || ||| || ||||||||| Sbjct: 2698 tagctggttctccccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctaggggt 2757 Query: 268 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 327 ||||| |||||||||||||||||||| ||||||||||||||| |||||||| |||||| Sbjct: 2758 aaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaatac 2817 Query: 328 taga 331 |||| Sbjct: 2818 taga 2821 Score = 123 bits (62), Expect = 6e-25 Identities = 89/98 (90%) Strand = Plus / Plus Query: 364 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 423 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 2839 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 2898 Query: 424 taaggcccctaaatgaccgctcagtgataaaggaggtg 461 ||||||||||||||| ||||| |||| |||||||||| Sbjct: 2899 taaggcccctaaatggccgctaagtggcaaaggaggtg 2936
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 281 bits (142), Expect = 1e-72 Identities = 230/258 (89%), Gaps = 1/258 (0%) Strand = Plus / Plus Query: 77 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 136 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 25483 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaag 25542 Query: 137 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 196 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 25543 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 25602 Query: 197 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 255 |||||| | ||||||||||||||||||||||||||||||||||||||| ||| | || Sbjct: 25603 gtcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataagg 25662 Query: 256 acatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 315 | ||||||||||||||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 25663 ctgtttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggca 25722 Query: 316 aactctgaatactagata 333 |||||||||||||||||| Sbjct: 25723 aactctgaatactagata 25740 Score = 133 bits (67), Expect = 6e-28 Identities = 91/99 (91%) Strand = Plus / Plus Query: 363 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 422 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 25753 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 25812 Query: 423 ctaaggcccctaaatgaccgctcagtgataaaggaggtg 461 |||||||||| |||||| || | ||||| |||||||||| Sbjct: 25813 ctaaggccccaaaatgatcgttaagtgacaaaggaggtg 25851
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 281 bits (142), Expect = 1e-72 Identities = 254/290 (87%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 39 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 98 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 189567 gaaagcgagcttgaatagagcgttagtcactatttatagacccgaacccggatgatctag 189626 Query: 99 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 158 ||||| ||||| |||||||| | | | |||||| ||||||||||||||||||||||||| Sbjct: 189627 ccatggccagggtgaagcttaggtaacactaagtggaggtccgaaccgactgatgttgaa 189686 Query: 159 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 218 |||||||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 189687 aaatcagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 189746 Query: 219 tctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgt 277 ||||||||||||| ||||||||||||| ||||| ||| | ||||||||||||||| Sbjct: 189747 tctccccgaaatgtgttgaggcgcagcggttgatgcttaatcttgggggtaaagcactgt 189806 Query: 278 ttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 327 |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 189807 ttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 189856 Score = 281 bits (142), Expect = 1e-72 Identities = 254/290 (87%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 39 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 98 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 150994 gaaagcgagcttgaatagagcgttagtcactatttatagacccgaacccggatgatctag 151053 Query: 99 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 158 ||||| ||||| |||||||| | | | |||||| ||||||||||||||||||||||||| Sbjct: 151054 ccatggccagggtgaagcttaggtaacactaagtggaggtccgaaccgactgatgttgaa 151113 Query: 159 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 218 |||||||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 151114 aaatcagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 151173 Query: 219 tctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgt 277 ||||||||||||| ||||||||||||| ||||| ||| | ||||||||||||||| Sbjct: 151174 tctccccgaaatgtgttgaggcgcagcggttgatgcttaatcttgggggtaaagcactgt 151233 Query: 278 ttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 327 |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 151234 ttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 151283 Score = 103 bits (52), Expect = 5e-19 Identities = 88/100 (88%) Strand = Plus / Plus Query: 364 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 423 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 189872 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 189931 Query: 424 taaggcccctaaatgaccgctcagtgataaaggaggtggg 463 |||||||||||||| | ||| |||| |||||||||||| Sbjct: 189932 taaggcccctaaataattgctaagtggcaaaggaggtggg 189971 Score = 103 bits (52), Expect = 5e-19 Identities = 88/100 (88%) Strand = Plus / Plus Query: 364 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 423 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 151299 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 151358 Query: 424 taaggcccctaaatgaccgctcagtgataaaggaggtggg 463 |||||||||||||| | ||| |||| |||||||||||| Sbjct: 151359 taaggcccctaaataattgctaagtggcaaaggaggtggg 151398
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 276 bits (139), Expect = 6e-71 Identities = 148/151 (98%) Strand = Plus / Plus Query: 328 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 387 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19152830 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 19152889 Query: 388 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 447 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19152890 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 19152949 Query: 448 tgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||| |||| Sbjct: 19152950 tgataaaggaggtgggggtgcaaagatagcc 19152980
>dbj|AP005127.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0062D12 Length = 155408 Score = 276 bits (139), Expect = 6e-71 Identities = 148/151 (98%) Strand = Plus / Plus Query: 328 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 387 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 76225 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 76284 Query: 388 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 447 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 76285 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 76344 Query: 448 tgataaaggaggtgggggtgcaaagacagcc 478 |||||||||||||||||||||||||| |||| Sbjct: 76345 tgataaaggaggtgggggtgcaaagatagcc 76375
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 274 bits (138), Expect = 2e-70 Identities = 256/293 (87%), Gaps = 3/293 (1%) Strand = Plus / Plus Query: 39 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 98 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 188644 gaaagcgagcttgaatagagcgttggtcactatttatagacccgaacccggatgatctag 188703 Query: 99 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 158 ||||| ||||| |||||||| | | | |||||| |||||||||||||||| |||||||| Sbjct: 188704 ccatggccagggtgaagcttaggtaacactaagtggaggtccgaaccgactaatgttgaa 188763 Query: 159 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 218 ||| |||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 188764 aaattagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 188823 Query: 219 tctccccgaaatgcgttgaggcgcagcagttga--ctggacatctaggggtaaagcactg 276 ||||||||||||| ||||||||||||| ||||| || | | |||||||||||||||| Sbjct: 188824 tctccccgaaatgtgttgaggcgcagcggttgatgct-taaacttaggggtaaagcactg 188882 Query: 277 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 329 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 188883 tttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatacta 188935 Score = 266 bits (134), Expect = 6e-68 Identities = 255/293 (87%), Gaps = 3/293 (1%) Strand = Plus / Plus Query: 39 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 98 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 150201 gaaagcgagcttgaatagagcgttggtcactatttatagacccgaacccggatgatctag 150260 Query: 99 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 158 ||||| ||||| |||||||| | | | |||||| ||||||||| |||||| |||||||| Sbjct: 150261 ccatggccagggtgaagcttaggtaacactaagtggaggtccgagccgactaatgttgaa 150320 Query: 159 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 218 ||| |||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 150321 aaattagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 150380 Query: 219 tctccccgaaatgcgttgaggcgcagcagttga--ctggacatctaggggtaaagcactg 276 ||||||||||||| ||||||||||||| ||||| || | | |||||||||||||||| Sbjct: 150381 tctccccgaaatgtgttgaggcgcagcggttgatgct-taaacttaggggtaaagcactg 150439 Query: 277 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 329 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 150440 tttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatacta 150492 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 366 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 425 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 188951 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 189010 Query: 426 aggcccctaaat 437 ||||||| |||| Sbjct: 189011 aggccccaaaat 189022 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 366 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 425 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 150508 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 150567 Query: 426 aggcccctaaat 437 ||||||| |||| Sbjct: 150568 aggccccaaaat 150579
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 272 bits (137), Expect = 1e-69 Identities = 231/260 (88%), Gaps = 3/260 (1%) Strand = Plus / Plus Query: 72 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 131 |||| |||||||||||| |||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 687 ttatagacccgaacctgagtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 746 Query: 132 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 191 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 747 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 806 Query: 192 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 251 ||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 807 tgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttgt 866 Query: 252 c--tggacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 308 | ||| | | | |||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 867 cgatgggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaat 926 Query: 309 cgaggcaaactctgaatact 328 || ||||||| ||||||| Sbjct: 927 cgttgcaaactaagaatact 946 Score = 131 bits (66), Expect = 2e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 364 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 423 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 965 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 1024 Query: 424 taaggcccctaaatgaccgctcagtgataaaggaggtg 461 |||||||||||||| || ||| |||| |||||||||| Sbjct: 1025 taaggcccctaaataacggctaagtgggaaaggaggtg 1062
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 272 bits (137), Expect = 1e-69 Identities = 231/260 (88%), Gaps = 3/260 (1%) Strand = Plus / Plus Query: 72 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 131 |||| |||||||||||| |||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 2425 ttatagacccgaacctgagtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 2484 Query: 132 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 191 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 2485 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 2544 Query: 192 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 251 ||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 2545 tgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttgt 2604 Query: 252 c--tggacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 308 | ||| | | | |||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 2605 cgatgggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaat 2664 Query: 309 cgaggcaaactctgaatact 328 || ||||||| ||||||| Sbjct: 2665 cgttgcaaactaagaatact 2684 Score = 131 bits (66), Expect = 2e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 364 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 423 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 2703 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 2762 Query: 424 taaggcccctaaatgaccgctcagtgataaaggaggtg 461 |||||||||||||| || ||| |||| |||||||||| Sbjct: 2763 taaggcccctaaataacggctaagtgggaaaggaggtg 2800
>emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome; segment 6/7 Length = 348071 Score = 268 bits (135), Expect = 2e-68 Identities = 189/207 (91%) Strand = Plus / Minus Query: 35 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 94 |||||||||||||||| ||||||||||| |||| || |||| |||||||||| ||||||| Sbjct: 5967 tagcgaaagcgagtctgaatagggcgatcgtcagtgtttatagacccgaacccgggtgat 5908 Query: 95 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 154 ||| ||||| |||||||||||||||| ||| || ||| ||||||||||||||||||||| Sbjct: 5907 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgatgt 5848 Query: 155 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 214 |||| |||||||||||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 5847 tgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 5788 Query: 215 tggttctccccgaaatgcgttgaggcg 241 |||||||||||||||| |||||||||| Sbjct: 5787 tggttctccccgaaatacgttgaggcg 5761 Score = 79.8 bits (40), Expect = 7e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 376 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 435 ||||||||||||| ||| ||||| ||||||||||||| || | |||||||||| ||| || Sbjct: 5645 tgggggataagctccatagtcgaaagggaaacagcccagaccgccagctaaggtccccaa 5586 Query: 436 atgaccgctcagtgataaaggaggtggg 463 || | | || |||||||||||||||||| Sbjct: 5585 atcaacactaagtgataaaggaggtggg 5558 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 277 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 327 ||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 5723 tttcggtgcgggctgcgagagcggtacctaatcgagatgaactctgaatac 5673
>emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome; segment 1/7 Length = 349391 Score = 268 bits (135), Expect = 2e-68 Identities = 189/207 (91%) Strand = Plus / Plus Query: 35 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 94 |||||||||||||||| ||||||||||| |||| || |||| |||||||||| ||||||| Sbjct: 211805 tagcgaaagcgagtctgaatagggcgatcgtcagtgtttatagacccgaacccgggtgat 211864 Query: 95 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 154 ||| ||||| |||||||||||||||| ||| || ||| ||||||||||||||||||||| Sbjct: 211865 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgatgt 211924 Query: 155 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 214 |||| |||||||||||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 211925 tgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 211984 Query: 215 tggttctccccgaaatgcgttgaggcg 241 |||||||||||||||| |||||||||| Sbjct: 211985 tggttctccccgaaatacgttgaggcg 212011 Score = 79.8 bits (40), Expect = 7e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 376 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 435 ||||||||||||| ||| ||||| ||||||||||||| || | |||||||||| ||| || Sbjct: 212127 tgggggataagctccatagtcgaaagggaaacagcccagaccgccagctaaggtccccaa 212186 Query: 436 atgaccgctcagtgataaaggaggtggg 463 || | | || |||||||||||||||||| Sbjct: 212187 atcaacactaagtgataaaggaggtggg 212214 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 277 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 327 ||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 212049 tttcggtgcgggctgcgagagcggtacctaatcgagatgaactctgaatac 212099
>gb|DQ312949.1| Uncultured bacterium clone 3M6B 23S ribosomal RNA gene, partial sequence Length = 806 Score = 268 bits (135), Expect = 2e-68 Identities = 189/207 (91%) Strand = Plus / Plus Query: 35 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 94 |||||||||||||||| ||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 492 tagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaacccgggtgat 551 Query: 95 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 154 ||| ||||| |||||||||||||||| ||| || ||| ||||||||||||||||||||| Sbjct: 552 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgatgt 611 Query: 155 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 214 |||| |||||||||||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 612 tgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 671 Query: 215 tggttctccccgaaatgcgttgaggcg 241 |||||||||||||||| |||||||||| Sbjct: 672 tggttctccccgaaatacgttgaggcg 698 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 277 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 327 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 268 bits (135), Expect = 2e-68 Identities = 260/300 (86%), Gaps = 5/300 (1%) Strand = Plus / Plus Query: 36 agcgaaagcgagtcttaatagggcga--ttgtcactgcttatggacccgaacctgggtga 93 ||||||||| ||||| |||||||| | | |||||| ||| ||||||||||| |||||| Sbjct: 616 agcgaaagcaagtctgaatagggcaaaatcgtcactttttagggacccgaacccgggtga 675 Query: 94 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 153 |||| ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||| Sbjct: 676 tctaaccatggccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatg 735 Query: 154 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 213 ||||| |||| ||||||||| |||||||||||||||||||||| |||||| | ||||||| Sbjct: 736 ttgaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaactcggagctag 795 Query: 214 ctggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatctaggggtaaa 270 |||||||||||||||||||||||||||||||| ||| ||| || |||||||||||| Sbjct: 796 ctggttctccccgaaatgcgttgaggcgcagcggttggcgacgggctgtctaggggtaaa 855 Query: 271 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 330 |||||||||||||||||||| || || |||||||||||| ||||||| ||||||||| Sbjct: 856 gcactgtttcggtgcgggctacgaaagtggtaccaaatcgtagcaaactaagaatactag 915 Score = 107 bits (54), Expect = 3e-20 Identities = 87/98 (88%) Strand = Plus / Plus Query: 364 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 423 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||| |||| Sbjct: 933 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcatcagc 992 Query: 424 taaggcccctaaatgaccgctcagtgataaaggaggtg 461 ||||||||| |||| ||||| |||| ||||||||||| Sbjct: 993 taaggccccagaatggccgctaagtggtaaaggaggtg 1030
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 266 bits (134), Expect = 6e-68 Identities = 255/292 (87%), Gaps = 5/292 (1%) Strand = Plus / Plus Query: 39 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 98 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaaaagggcgataatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 99 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 158 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 159 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 218 ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 382 aaatcagcggatgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 441 Query: 219 tctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcact 275 ||||||||||||| ||| ||||||||| || ||| | | |||| | |||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaatgatt--atatctggggggtaaagcact 499 Query: 276 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 327 |||||||||||||||| | || ||||||||||||||| |||||||||||||| Sbjct: 500 gtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctgaatac 551 Score = 113 bits (57), Expect = 5e-22 Identities = 99/113 (87%) Strand = Plus / Plus Query: 363 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 422 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 423 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 475 |||||| ||| |||| | |||| |||||||||||||||| | ||||| ||||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagagtgcacagaca 678
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 262 bits (132), Expect = 9e-67 Identities = 257/298 (86%), Gaps = 3/298 (1%) Strand = Plus / Plus Query: 36 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 95 ||||||||| ||||| ||||||||| |||||||| |||||||||||||||| |||||||| Sbjct: 137128 agcgaaagcaagtctgaatagggcgtttgtcacttcttatggacccgaacccgggtgatc 137187 Query: 96 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 155 || |||||||||||||||||||||| | |||| ||| || | |||||||||| |||||| Sbjct: 137188 taaccatgaccaggatgaagcttgggtaaaaccaagtggaagaccgaaccgaccgatgtt 137247 Query: 156 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 215 ||| |||| |||||||||||||||||||||| ||||| | | |||||| | ||||||||| Sbjct: 137248 gaaaaatcggcggatgagttgtggttaggggagaaattctaatcgaactcggagctagct 137307 Query: 216 ggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatctaggggtaaagc 272 ||||||| ||||||| ||||||||||||| ||| ||| || |||||||||||||| Sbjct: 137308 ggttctcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtctaggggtaaagc 137367 Query: 273 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 330 ||||||||||||||||||| | | |||||||||||| |||||||| ||||||||| Sbjct: 137368 actgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcagaatactag 137425 Score = 262 bits (132), Expect = 9e-67 Identities = 257/298 (86%), Gaps = 3/298 (1%) Strand = Plus / Minus Query: 36 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 95 ||||||||| ||||| ||||||||| |||||||| |||||||||||||||| |||||||| Sbjct: 48416 agcgaaagcaagtctgaatagggcgtttgtcacttcttatggacccgaacccgggtgatc 48357 Query: 96 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 155 || |||||||||||||||||||||| | |||| ||| || | |||||||||| |||||| Sbjct: 48356 taaccatgaccaggatgaagcttgggtaaaaccaagtggaagaccgaaccgaccgatgtt 48297 Query: 156 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 215 ||| |||| |||||||||||||||||||||| ||||| | | |||||| | ||||||||| Sbjct: 48296 gaaaaatcggcggatgagttgtggttaggggagaaattctaatcgaactcggagctagct 48237 Query: 216 ggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatctaggggtaaagc 272 ||||||| ||||||| ||||||||||||| ||| ||| || |||||||||||||| Sbjct: 48236 ggttctcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtctaggggtaaagc 48177 Query: 273 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 330 ||||||||||||||||||| | | |||||||||||| |||||||| ||||||||| Sbjct: 48176 actgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcagaatactag 48119 Score = 125 bits (63), Expect = 1e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 364 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 423 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 137442 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 137501 Query: 424 taaggcccctaaatg 438 ||||||||||||||| Sbjct: 137502 taaggcccctaaatg 137516 Score = 125 bits (63), Expect = 1e-25 Identities = 72/75 (96%) Strand = Plus / Minus Query: 364 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 423 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 48102 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 48043 Query: 424 taaggcccctaaatg 438 ||||||||||||||| Sbjct: 48042 taaggcccctaaatg 48028
>gb|L43539.1|CRECPRRNL Chlamydomonas sp. (SAG 66.72) chloroplast large subunit ribosomal RNA (rrnL) gene Length = 5575 Score = 262 bits (132), Expect = 9e-67 Identities = 273/317 (86%), Gaps = 10/317 (3%) Strand = Plus / Plus Query: 26 ccggngccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 80 |||| ||| ||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct: 762 ccggagccttagcgaaagcgagtcttaatagggcgattaaagagtcacttcctatggacc 821 Query: 81 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 140 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 822 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 881 Query: 141 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 200 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 882 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 941 Query: 201 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggac 257 ||| | ||||||||||| ||||||||||||||||||||||||||| | ||||| | Sbjct: 942 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagct 1000 Query: 258 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 316 |||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||| Sbjct: 1001 atctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaa 1060 Query: 317 actctgaatactagata 333 |||| |||||||||||| Sbjct: 1061 actcagaatactagata 1077 Score = 73.8 bits (37), Expect = 5e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 398 agagggaaacagcccggatcaccagctaaggcccctaaatg 438 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1126 agagggaaacagcccagatcaccagctaaggcccctaaatg 1166
>emb|X68923.1|CHCSRRNX1 Chloroplast Chlamydomonas sp. 66.72 rrnL gene, exon 1 Length = 1218 Score = 262 bits (132), Expect = 9e-67 Identities = 273/317 (86%), Gaps = 10/317 (3%) Strand = Plus / Plus Query: 26 ccggngccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 80 |||| ||| ||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct: 762 ccggagccttagcgaaagcgagtcttaatagggcgattaaagagtcacttcctatggacc 821 Query: 81 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 140 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 822 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 881 Query: 141 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 200 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 882 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 941 Query: 201 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggac 257 ||| | ||||||||||| ||||||||||||||||||||||||||| | ||||| | Sbjct: 942 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagct 1000 Query: 258 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 316 |||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||| Sbjct: 1001 atctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaa 1060 Query: 317 actctgaatactagata 333 |||| |||||||||||| Sbjct: 1061 actcagaatactagata 1077 Score = 73.8 bits (37), Expect = 5e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 398 agagggaaacagcccggatcaccagctaaggcccctaaatg 438 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1126 agagggaaacagcccagatcaccagctaaggcccctaaatg 1166
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 260 bits (131), Expect = 4e-66 Identities = 258/299 (86%), Gaps = 6/299 (2%) Strand = Plus / Plus Query: 36 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 95 ||||||||||||||| ||||||||| ||||||| ||| |||||||||| |||||||| Sbjct: 635 agcgaaagcgagtctgaatagggcgcatgtcacttgttaaagacccgaacccgggtgatc 694 Query: 96 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 155 || ||||| |||||| ||||||||| |||||| | || |||||||||||| || ||| Sbjct: 695 taaccatggccaggaggaagcttgggtgaaaccttgtggaagtccgaaccgaccgacgtt 754 Query: 156 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 215 ||||| || |||||||||||||||||||||||||||| ||| |||||| | ||||||||| Sbjct: 755 gaagagtcggcggatgagttgtggttaggggtgaaataccagtcgaactcggagctagct 814 Query: 216 ggttctccccgaaatgcgttgaggcgcagcagttga-----ctggaca-tctaggggtaa 269 |||||||||||||||||||||||||||||| || || ||| || ||||||||||| Sbjct: 815 ggttctccccgaaatgcgttgaggcgcagcggtcgattaagatgggcagtctaggggtaa 874 Query: 270 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 328 |||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||| Sbjct: 875 agcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaagaatact 933 Score = 131 bits (66), Expect = 2e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 360 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 419 |||||||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||| Sbjct: 948 tcggccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcac 1007 Query: 420 cagctaaggcccctaaatgaccgctcagtgataaagga 457 ||||||||||||| |||| |||||||||||||||||| Sbjct: 1008 cagctaaggccccagaatggccgctcagtgataaagga 1045
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 260 bits (131), Expect = 4e-66 Identities = 188/207 (90%) Strand = Plus / Plus Query: 35 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 94 |||||||||||||||||||||||||| |||||| || |||| |||||||||| |||||| Sbjct: 356108 tagcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgat 356167 Query: 95 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 154 ||| ||||| |||||||||||||||| ||| || ||| ||||||||||||||||||||| Sbjct: 356168 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgatgt 356227 Query: 155 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 214 |||| |||||||||||||| |||||||||||||||||||||| ||||||| |||||||| Sbjct: 356228 tgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagc 356287 Query: 215 tggttctccccgaaatgcgttgaggcg 241 |||||||||||||||| |||||||||| Sbjct: 356288 tggttctccccgaaatacgttgaggcg 356314 Score = 56.0 bits (28), Expect = 1e-04 Identities = 73/88 (82%) Strand = Plus / Plus Query: 376 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 435 ||||||||||||| || |||| ||||||||||||| || | |||||||||| ||| || Sbjct: 356430 tgggggataagctccacactcgaaagggaaacagcccagaccgccagctaaggtcccaaa 356489 Query: 436 atgaccgctcagtgataaaggaggtggg 463 || | || |||||||||||||||||| Sbjct: 356490 atcagtactaagtgataaaggaggtggg 356517 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 277 tttcggtgcgggctgcgcgagcggtaccaaatcga 311 ||||||||||||||||| |||||||||||||||| Sbjct: 356352 tttcggtgcgggctgcgaaagcggtaccaaatcga 356386
>gb|AY584509.1| Anabaena cylindrica strain UTEX 629 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 258 bits (130), Expect = 1e-65 Identities = 254/292 (86%), Gaps = 5/292 (1%) Strand = Plus / Plus Query: 39 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 98 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaagagggcgataatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 99 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 158 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 159 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 218 |||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 382 aaatcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 441 Query: 219 tctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcact 275 ||||||||||||| ||| ||||||||| || ||| | | |||| | |||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaatgatt--atatctggggggtaaagcact 499 Query: 276 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 327 |||||||||||||||| | || ||||||||||||||| |||||||||||||| Sbjct: 500 gtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctgaatac 551 Score = 113 bits (57), Expect = 5e-22 Identities = 99/113 (87%) Strand = Plus / Plus Query: 363 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 422 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 423 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 475 |||||| ||| |||| | |||| | |||||||||||||||| ||||| ||||| Sbjct: 626 ctaaggtccccaaatcagcgctaattgataaaggaggtgggagtgcatagaca 678
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 256 bits (129), Expect = 6e-65 Identities = 267/307 (86%), Gaps = 7/307 (2%) Strand = Plus / Plus Query: 35 tagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacctgggtg 92 |||||||||||||||| ||||||||| | |||||| |||||||||||||||| ||||| Sbjct: 661 tagcgaaagcgagtctgaatagggcgtcttcgtcacttcttatggacccgaacccgggtg 720 Query: 93 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 152 ||||| |||||||||||||||||||||| | || | ||| ||||||||||||||| ||| Sbjct: 721 atctaaccatgaccaggatgaagcttgggtaaatccaagtggaggtccgaaccgaccgat 780 Query: 153 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 212 |||||| |||| |||||||||||||||||||||| ||||| ||| |||||| | |||||| Sbjct: 781 gttgaaaaatcggcggatgagttgtggttaggggagaaattccaatcgaactcggagcta 840 Query: 213 gctggttctccccgaaatgcgttgaggcgcagcagt--tgactggac-atctaggggtaa 269 ||||| ||||||||||||||||||||||||||| || || || || |||| ||||||| Sbjct: 841 gctggatctccccgaaatgcgttgaggcgcagcggtaacga-tgaactatcttggggtaa 899 Query: 270 agc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 328 ||| ||||||||| ||||||||||| || |||||||| ||| ||||||||| |||||| Sbjct: 900 agctactgtttcgatgcgggctgcgaaagtggtaccaagtcgtggcaaactcagaataca 959 Query: 329 agatatg 335 ||||||| Sbjct: 960 agatatg 966 Score = 109 bits (55), Expect = 8e-21 Identities = 70/75 (93%) Strand = Plus / Plus Query: 364 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 423 |||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 978 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagc 1037 Query: 424 taaggcccctaaatg 438 ||||||||||||||| Sbjct: 1038 taaggcccctaaatg 1052
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 252 bits (127), Expect = 9e-64 Identities = 187/207 (90%) Strand = Plus / Minus Query: 35 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 94 |||||||||||||||| ||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 2138151 tagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaacccgggtgat 2138092 Query: 95 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 154 ||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| || Sbjct: 2138091 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgacgt 2138032 Query: 155 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 214 |||| | |||||||||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 2138031 tgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 2137972 Query: 215 tggttctccccgaaatgcgttgaggcg 241 |||||||||||||||| |||||||||| Sbjct: 2137971 tggttctccccgaaatacgttgaggcg 2137945 Score = 252 bits (127), Expect = 9e-64 Identities = 187/207 (90%) Strand = Plus / Plus Query: 35 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 94 |||||||||||||||| ||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 476709 tagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaacccgggtgat 476768 Query: 95 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 154 ||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| || Sbjct: 476769 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgacgt 476828 Query: 155 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 214 |||| | |||||||||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 476829 tgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 476888 Query: 215 tggttctccccgaaatgcgttgaggcg 241 |||||||||||||||| |||||||||| Sbjct: 476889 tggttctccccgaaatacgttgaggcg 476915 Score = 87.7 bits (44), Expect = 3e-14 Identities = 77/88 (87%) Strand = Plus / Minus Query: 376 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 435 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 2137829 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 2137770 Query: 436 atgaccgctcagtgataaaggaggtggg 463 || | | || |||||||||||||||||| Sbjct: 2137769 atcaacactaagtgataaaggaggtggg 2137742 Score = 87.7 bits (44), Expect = 3e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 376 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 435 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 477031 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 477090 Query: 436 atgaccgctcagtgataaaggaggtggg 463 || | | || |||||||||||||||||| Sbjct: 477091 atcaacactaagtgataaaggaggtggg 477118 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 277 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 327 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 2137907 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 2137857 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 277 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 327 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 476953 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 477003
>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7 Length = 349122 Score = 252 bits (127), Expect = 9e-64 Identities = 187/207 (90%) Strand = Plus / Minus Query: 35 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 94 |||||||||||||||| ||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 339402 tagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaacccgggtgat 339343 Query: 95 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 154 ||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| || Sbjct: 339342 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgacgt 339283 Query: 155 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 214 |||| | |||||||||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 339282 tgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 339223 Query: 215 tggttctccccgaaatgcgttgaggcg 241 |||||||||||||||| |||||||||| Sbjct: 339222 tggttctccccgaaatacgttgaggcg 339196 Score = 252 bits (127), Expect = 9e-64 Identities = 187/207 (90%) Strand = Plus / Minus Query: 35 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 94 |||||||||||||||| ||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 132462 tagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaacccgggtgat 132403 Query: 95 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 154 ||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| || Sbjct: 132402 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgacgt 132343 Query: 155 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 214 |||| | |||||||||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 132342 tgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 132283 Query: 215 tggttctccccgaaatgcgttgaggcg 241 |||||||||||||||| |||||||||| Sbjct: 132282 tggttctccccgaaatacgttgaggcg 132256 Score = 79.8 bits (40), Expect = 7e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 376 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 435 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 339080 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccccaa 339021 Query: 436 atgaccgctcagtgataaaggaggtggg 463 || | | || |||||||||||||||||| Sbjct: 339020 atcaacactaagtgataaaggaggtggg 338993 Score = 79.8 bits (40), Expect = 7e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 376 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 435 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 132140 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccccaa 132081 Query: 436 atgaccgctcagtgataaaggaggtggg 463 || | | || |||||||||||||||||| Sbjct: 132080 atcaacactaagtgataaaggaggtggg 132053 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 277 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 327 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 339158 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 339108 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 277 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 327 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 132218 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 132168
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 252 bits (127), Expect = 9e-64 Identities = 187/207 (90%) Strand = Plus / Plus Query: 35 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 94 |||||||||||||||| ||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 492 tagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaacccgggtgat 551 Query: 95 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 154 ||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| || Sbjct: 552 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgacgt 611 Query: 155 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 214 |||| | |||||||||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 612 tgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 671 Query: 215 tggttctccccgaaatgcgttgaggcg 241 |||||||||||||||| |||||||||| Sbjct: 672 tggttctccccgaaatacgttgaggcg 698
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 252 bits (127), Expect = 9e-64 Identities = 187/207 (90%) Strand = Plus / Plus Query: 35 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 94 |||||||||||||||| ||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 492 tagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaacccgggtgat 551 Query: 95 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 154 ||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| || Sbjct: 552 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgacgt 611 Query: 155 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 214 |||| | |||||||||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 612 tgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 671 Query: 215 tggttctccccgaaatgcgttgaggcg 241 |||||||||||||||| |||||||||| Sbjct: 672 tggttctccccgaaatacgttgaggcg 698
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 252 bits (127), Expect = 9e-64 Identities = 187/207 (90%) Strand = Plus / Plus Query: 35 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 94 |||||||||||||||| ||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 492 tagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaacccgggtgat 551 Query: 95 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 154 ||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| || Sbjct: 552 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgacgt 611 Query: 155 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 214 |||| | |||||||||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 612 tgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 671 Query: 215 tggttctccccgaaatgcgttgaggcg 241 |||||||||||||||| |||||||||| Sbjct: 672 tggttctccccgaaatacgttgaggcg 698 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 277 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 327 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial sequence Length = 723 Score = 252 bits (127), Expect = 9e-64 Identities = 187/207 (90%) Strand = Plus / Plus Query: 35 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 94 |||||||||||||||| ||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 492 tagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaacccgggtgat 551 Query: 95 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 154 ||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| || Sbjct: 552 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgacgt 611 Query: 155 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 214 |||| | |||||||||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 612 tgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 671 Query: 215 tggttctccccgaaatgcgttgaggcg 241 |||||||||||||||| |||||||||| Sbjct: 672 tggttctccccgaaatacgttgaggcg 698
>gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RNA gene, partial sequence Length = 806 Score = 252 bits (127), Expect = 9e-64 Identities = 187/207 (90%) Strand = Plus / Plus Query: 35 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 94 |||||||||||||||| ||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 492 tagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaacccgggtgat 551 Query: 95 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 154 ||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| || Sbjct: 552 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgacgt 611 Query: 155 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 214 |||| | |||||||||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 612 tgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 671 Query: 215 tggttctccccgaaatgcgttgaggcg 241 |||||||||||||||| |||||||||| Sbjct: 672 tggttctccccgaaatacgttgaggcg 698 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 277 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 327 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 252 bits (127), Expect = 9e-64 Identities = 233/267 (87%), Gaps = 1/267 (0%) Strand = Plus / Plus Query: 64 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 123 ||||||| ||| |||||||||| || ||||||| |||| ||||| |||||||| | | Sbjct: 2429 gtcactgtttacagacccgaacccggatgatctagtcatggccagggtgaagcttaggta 2488 Query: 124 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 183 | |||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 2489 acactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgattag 2548 Query: 184 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 243 ||||||||||||| ||||| || ||||||||||||||||||||||||||||| |||||| Sbjct: 2549 gggtgaaatgccaatcgaatccggagctagctggttctccccgaaatgcgttttggcgca 2608 Query: 244 gcagttgactggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggta 302 || ||||| | | | ||||||||||||||||||||||| ||||||| | ||||||| Sbjct: 2609 gcggttgatgctatagcttaggggtaaagcactgtttcggtacgggctgtgaaagcggta 2668 Query: 303 ccaaatcgaggcaaactctgaatacta 329 ||||||||||||||||||||||||||| Sbjct: 2669 ccaaatcgaggcaaactctgaatacta 2695 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 364 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 423 |||||||||| ||||||||||||||||| ||| | ||||||||||||| || ||||||| Sbjct: 2709 ccagtgagacagtgggggataagcttcattgtcaaaagggaaacagcccagaccaccagc 2768 Query: 424 taaggcccctaaat 437 |||||||||||||| Sbjct: 2769 taaggcccctaaat 2782
>gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 250 bits (126), Expect = 4e-63 Identities = 189/210 (90%) Strand = Plus / Plus Query: 36 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 95 ||||||||||||||| |||||||||| |||| || || | |||||||||| |||||||| Sbjct: 260 agcgaaagcgagtctgaatagggcgaaagtcattgtttgtagacccgaacccgggtgatc 319 Query: 96 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 155 || ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||||| Sbjct: 320 taaccatgtccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgtt 379 Query: 156 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 215 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 380 gaaaaatcggcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 439 Query: 216 ggttctccccgaaatgcgttgaggcgcagc 245 |||||||||||||||||||||||||||||| Sbjct: 440 ggttctccccgaaatgcgttgaggcgcagc 469 Score = 127 bits (64), Expect = 4e-26 Identities = 100/112 (89%) Strand = Plus / Plus Query: 364 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 423 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 568 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 627 Query: 424 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 475 ||||| ||| |||| ||| || ||||| |||||||||||| ||||| ||||| Sbjct: 628 taaggtccccaaataaccactaagtgagaaaggaggtgggagtgcacagaca 679 Score = 113 bits (57), Expect = 5e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 263 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 322 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 323 aatac 327 ||||| Sbjct: 548 aatac 552
>gb|AY584518.1| Oscillatoria sp. strain PCC 6506 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 250 bits (126), Expect = 4e-63 Identities = 189/210 (90%) Strand = Plus / Plus Query: 36 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 95 ||||||||||||||| || |||||| | ||||||| |||| |||||||||| |||||||| Sbjct: 260 agcgaaagcgagtctgaaaagggcgttcgtcactgtttatagacccgaacccgggtgatc 319 Query: 96 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 155 || ||||| |||||||||||||||| | | || ||| |||||||||||||||||||||| Sbjct: 320 taaccatgtccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgtt 379 Query: 156 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 215 ||| |||||||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 380 gaaaaatcagcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 439 Query: 216 ggttctccccgaaatgcgttgaggcgcagc 245 |||||||||||||||| |||||||| |||| Sbjct: 440 ggttctccccgaaatgtgttgaggcacagc 469 Score = 125 bits (63), Expect = 1e-25 Identities = 90/99 (90%) Strand = Plus / Plus Query: 363 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 422 |||||| ||||| ||||||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 567 gccagtcagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccag 626 Query: 423 ctaaggcccctaaatgaccgctcagtgataaaggaggtg 461 |||||| ||| ||||||| ||| |||||||||||||||| Sbjct: 627 ctaaggtccccaaatgactgctaagtgataaaggaggtg 665 Score = 113 bits (57), Expect = 5e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 263 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 322 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 323 aatac 327 ||||| Sbjct: 548 aatac 552
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 250 bits (126), Expect = 4e-63 Identities = 182/200 (91%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 134 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 193 |||| |||||||||| ||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 736 gaggcccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatg 795 Query: 194 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 253 ||| |||||| | ||||||||||||||||||||||||||||||||||||||| || | | Sbjct: 796 ccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtgggtt 855 Query: 254 ---ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 310 || |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 856 tagggctatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcg 915 Query: 311 aggcaaactctgaatactag 330 || ||||||||||||||||| Sbjct: 916 agacaaactctgaatactag 935 Score = 81.8 bits (41), Expect = 2e-12 Identities = 69/77 (89%), Gaps = 1/77 (1%) Strand = Plus / Plus Query: 364 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc-ggatcaccag 422 ||||||||||| || |||||||||||||| ||||| ||||||||||||| ||| |||| | Sbjct: 953 ccagtgagacggtgagggataagcttcattgtcgaaagggaaacagcccaggaccaccgg 1012 Query: 423 ctaaggcccctaaatga 439 ||||||||||| ||||| Sbjct: 1013 ctaaggcccctcaatga 1029 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 63 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagctt 118 |||||||| ||||||||||||| | | |||||||| ||||||||||| |||||||| Sbjct: 664 tgtcactgtttatggacccgaatccgagtgatctaaccatgaccagggtgaagctt 719
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 246 bits (124), Expect = 6e-62 Identities = 263/304 (86%), Gaps = 4/304 (1%) Strand = Plus / Plus Query: 36 agcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaacctgggtgat 94 ||||||||| ||||| ||||||||| ||||||||| |||||||||||||||| ||||||| Sbjct: 658 agcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaacccgggtgat 717 Query: 95 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 154 |||| |||| |||||||||||||||| | | || ||| ||||||||||||||| ||||| Sbjct: 718 ctattcatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgt 777 Query: 155 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 214 |||| |||| ||||||||| |||| |||||| ||||| ||| |||||| | |||||||| Sbjct: 778 tgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaactcggagctagc 837 Query: 215 tggttctccccgaaatgcgttgaggcgcagcagt-tgactggac-atctaggggtaaagc 272 ||| ||||||||||||||||||||||||||| || | ||| | |||| |||||||||| Sbjct: 838 tggatctccccgaaatgcgttgaggcgcagcggtaacaatgggctatcttggggtaaagc 897 Query: 273 -actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 331 ||||||||| ||||||||||| ||| |||||||| ||| ||||||||| |||||| ||| Sbjct: 898 gactgtttcgatgcgggctgcgagagtggtaccaagtcgtggcaaactcagaatacaaga 957 Query: 332 tatg 335 |||| Sbjct: 958 tatg 961 Score = 125 bits (63), Expect = 1e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 364 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 423 ||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 973 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1032 Query: 424 taaggcccctaaatg 438 ||||||||||||||| Sbjct: 1033 taaggcccctaaatg 1047
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 246 bits (124), Expect = 6e-62 Identities = 271/317 (85%), Gaps = 10/317 (3%) Strand = Plus / Plus Query: 26 ccggngccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 80 |||| ||| ||||||||||||||||||||||||||| | |||||| |||||||| Sbjct: 816 ccggagccttagcgaaagcgagtcttaatagggcgaataaagagtcactttctatggacc 875 Query: 81 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 140 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 876 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 935 Query: 141 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 200 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 936 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 995 Query: 201 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggac 257 ||| | ||||||||||| ||||||||||||||||||||||||||| | ||||| | Sbjct: 996 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagct 1054 Query: 258 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 316 |||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||| Sbjct: 1055 atctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaa 1114 Query: 317 actctgaatactagata 333 |||| |||||||||||| Sbjct: 1115 actcagaatactagata 1131 Score = 73.8 bits (37), Expect = 5e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 398 agagggaaacagcccggatcaccagctaaggcccctaaatg 438 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1180 agagggaaacagcccagatcaccagctaaggcccctaaatg 1220
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 246 bits (124), Expect = 6e-62 Identities = 263/304 (86%), Gaps = 4/304 (1%) Strand = Plus / Plus Query: 36 agcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaacctgggtgat 94 ||||||||| ||||| ||||||||| ||||||||| |||||||||||||||| ||||||| Sbjct: 658 agcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaacccgggtgat 717 Query: 95 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 154 |||| |||| |||||||||||||||| | | || ||| ||||||||||||||| ||||| Sbjct: 718 ctattcatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgt 777 Query: 155 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 214 |||| |||| ||||||||| |||| |||||| ||||| ||| |||||| | |||||||| Sbjct: 778 tgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaactcggagctagc 837 Query: 215 tggttctccccgaaatgcgttgaggcgcagcagt-tgactggac-atctaggggtaaagc 272 ||| ||||||||||||||||||||||||||| || | ||| | |||| |||||||||| Sbjct: 838 tggatctccccgaaatgcgttgaggcgcagcggtaacaatgggctatcttggggtaaagc 897 Query: 273 -actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 331 ||||||||| ||||||||||| ||| |||||||| ||| ||||||||| |||||| ||| Sbjct: 898 gactgtttcgatgcgggctgcgagagtggtaccaagtcgtggcaaactcagaatacaaga 957 Query: 332 tatg 335 |||| Sbjct: 958 tatg 961 Score = 125 bits (63), Expect = 1e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 364 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 423 ||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 973 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1032 Query: 424 taaggcccctaaatg 438 ||||||||||||||| Sbjct: 1033 taaggcccctaaatg 1047
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 244 bits (123), Expect = 2e-61 Identities = 192/215 (89%) Strand = Plus / Plus Query: 36 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 95 |||||||||||||| |||||||||||| ||||| || | |||||||||| |||||||| Sbjct: 262 agcgaaagcgagtcctaatagggcgatcgtcacgctttgtagacccgaacccgggtgatc 321 Query: 96 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 155 || ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||||| Sbjct: 322 taaccatgtccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgtt 381 Query: 156 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 215 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 382 gaaaaatcggcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 441 Query: 216 ggttctccccgaaatgcgttgaggcgcagcagttg 250 |||||||||||||||| ||||||||||||| |||| Sbjct: 442 ggttctccccgaaatgtgttgaggcgcagcggttg 476 Score = 137 bits (69), Expect = 4e-29 Identities = 102/113 (90%) Strand = Plus / Plus Query: 363 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 422 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 569 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 628 Query: 423 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 475 |||||| ||| ||||| ||||||||||| ||||||||||| ||||| ||||| Sbjct: 629 ctaaggtccccaaatggtcgctcagtgattaaggaggtgggagtgcacagaca 681 Score = 97.6 bits (49), Expect = 3e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 263 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 322 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 490 ggggtaaagcactgtttcggtgcgggctgcctcagcggtaccaaatcgagacaaactctg 549 Query: 323 aatac 327 ||||| Sbjct: 550 aatac 554
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 244 bits (123), Expect = 2e-61 Identities = 186/207 (89%) Strand = Plus / Plus Query: 35 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 94 |||||||||||||||| ||||||||| |||||| | |||| |||||||||| ||||||| Sbjct: 479 tagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaacccgggtgat 538 Query: 95 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 154 ||| ||||| |||||||||||||||| ||| || ||| ||||||||||| ||||||||| Sbjct: 539 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacggactgatgt 598 Query: 155 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 214 |||| ||||||| |||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 599 tgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 658 Query: 215 tggttctccccgaaatgcgttgaggcg 241 |||||||||||||||| |||||||||| Sbjct: 659 tggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 277 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 327 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 244 bits (123), Expect = 2e-61 Identities = 186/207 (89%) Strand = Plus / Plus Query: 35 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 94 |||||||||||||||| ||||||||| |||||| | |||| |||||||||| ||||||| Sbjct: 479 tagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaacccgggtgat 538 Query: 95 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 154 ||| ||||| |||||||||||||||| ||| || ||| ||||||||||| ||||||||| Sbjct: 539 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacggactgatgt 598 Query: 155 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 214 |||| ||||||| |||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 599 tgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 658 Query: 215 tggttctccccgaaatgcgttgaggcg 241 |||||||||||||||| |||||||||| Sbjct: 659 tggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 277 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 327 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 244 bits (123), Expect = 2e-61 Identities = 186/207 (89%) Strand = Plus / Plus Query: 35 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 94 |||||||||||||||| ||||||||| |||||| | |||| |||||||||| ||||||| Sbjct: 479 tagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaacccgggtgat 538 Query: 95 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 154 ||| ||||| |||||||||||||||| ||| || ||| ||||||||||| ||||||||| Sbjct: 539 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacggactgatgt 598 Query: 155 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 214 |||| ||||||| |||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 599 tgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 658 Query: 215 tggttctccccgaaatgcgttgaggcg 241 |||||||||||||||| |||||||||| Sbjct: 659 tggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 277 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 327 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 242 bits (122), Expect = 9e-61 Identities = 185/206 (89%) Strand = Plus / Plus Query: 36 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 95 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 320233 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 320292 Query: 96 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 155 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 320293 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 320352 Query: 156 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 215 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 320353 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 320412 Query: 216 ggttctccccgaaatgcgttgaggcg 241 ||||||||||||||| |||||||||| Sbjct: 320413 ggttctccccgaaatacgttgaggcg 320438 Score = 87.7 bits (44), Expect = 3e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 376 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 435 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 320554 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 320613 Query: 436 atgaccgctcagtgataaaggaggtggg 463 || | |||| |||||||||||||||||| Sbjct: 320614 attaacgctaagtgataaaggaggtggg 320641 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 277 tttcggtgcgggctgcgcgagcggtaccaaatcga 311 ||||||||||||||||| |||||||||||||||| Sbjct: 320476 tttcggtgcgggctgcgaaagcggtaccaaatcga 320510
>gb|AY033310.1| Uncultured Prochlorococcus sp. MB11F02 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3916 Score = 242 bits (122), Expect = 9e-61 Identities = 185/206 (89%) Strand = Plus / Plus Query: 36 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 95 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 2656 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 2715 Query: 96 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 155 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 2716 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 2775 Query: 156 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 215 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 2776 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 2835 Query: 216 ggttctccccgaaatgcgttgaggcg 241 ||||||||||||||| |||||||||| Sbjct: 2836 ggttctccccgaaatacgttgaggcg 2861 Score = 87.7 bits (44), Expect = 3e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 376 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 435 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 2977 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 3036 Query: 436 atgaccgctcagtgataaaggaggtggg 463 || | |||| |||||||||||||||||| Sbjct: 3037 attaacgctaagtgataaaggaggtggg 3064 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 277 tttcggtgcgggctgcgcgagcggtaccaaatcga 311 ||||||||||||||||| |||||||||||||||| Sbjct: 2899 tttcggtgcgggctgcgaaagcggtaccaaatcga 2933
>gb|AY033307.1| Uncultured Prochlorococcus sp. MB11E08 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3917 Score = 242 bits (122), Expect = 9e-61 Identities = 185/206 (89%) Strand = Plus / Plus Query: 36 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 95 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 2657 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 2716 Query: 96 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 155 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 2717 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 2776 Query: 156 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 215 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 2777 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 2836 Query: 216 ggttctccccgaaatgcgttgaggcg 241 ||||||||||||||| |||||||||| Sbjct: 2837 ggttctccccgaaatacgttgaggcg 2862 Score = 87.7 bits (44), Expect = 3e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 376 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 435 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 2978 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 3037 Query: 436 atgaccgctcagtgataaaggaggtggg 463 || | |||| |||||||||||||||||| Sbjct: 3038 attaacgctaagtgataaaggaggtggg 3065 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 277 tttcggtgcgggctgcgcgagcggtaccaaatcga 311 ||||||||||||||||| |||||||||||||||| Sbjct: 2900 tttcggtgcgggctgcgaaagcggtaccaaatcga 2934
>gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 242 bits (122), Expect = 9e-61 Identities = 253/295 (85%), Gaps = 5/295 (1%) Strand = Plus / Plus Query: 36 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 95 ||||||||||||||| |||||||||| |||| || | |||||||||| |||||||| Sbjct: 259 agcgaaagcgagtctgaatagggcgaacgtcataatttgtagacccgaacccgggtgatc 318 Query: 96 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 155 || ||||| |||||||||||||||| | |||| ||| |||||||||||||||| ||||| Sbjct: 319 taaccatggccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgactaatgtt 378 Query: 156 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 215 ||| ||| |||||||||| |||||||||||||||||||||| |||||| | ||||||||| Sbjct: 379 gaaaaattagcggatgagctgtggttaggggtgaaatgccaatcgaactcggagctagct 438 Query: 216 ggttctccccgaaatgcgttgaggcgcagcagttgactggacatcta---ggggtaaagc 272 |||||||||||||||| ||||||||||||| || | |||| | || |||||||||| Sbjct: 439 ggttctccccgaaatgtgttgaggcgcagcggt--agtggaagtttagtcggggtaaagc 496 Query: 273 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 327 ||||||||| |||||||| | || ||||||||| ||||||||||||||||||| Sbjct: 497 actgtttcgccgcgggctgggagaccggtaccaaggcgaggcaaactctgaatac 551 Score = 115 bits (58), Expect = 1e-22 Identities = 94/106 (88%) Strand = Plus / Plus Query: 364 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 423 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 566 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 625 Query: 424 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 469 ||||| ||| |||||| || ||||| |||||||||||| ||||| Sbjct: 626 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgca 671
>gb|AY584513.1| Nodularia harveyana strain CCAP 1452/1 23S ribosomal RNA gene, partial sequence Length = 2387 Score = 242 bits (122), Expect = 9e-61 Identities = 252/292 (86%), Gaps = 5/292 (1%) Strand = Plus / Plus Query: 39 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 98 |||| ||||||| || ||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaaaagggcgaaaatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 99 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 158 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 159 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 218 |||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 382 aaatcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 441 Query: 219 tctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcact 275 ||||||||||||| ||| ||||||||| || ||| | | |||| | |||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaatgatt--aaatctggggggtaaagcact 499 Query: 276 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 327 |||||||||||||||| | || ||||||||||||||| ||||||| |||||| Sbjct: 500 gtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcagaatac 551 Score = 113 bits (57), Expect = 5e-22 Identities = 99/113 (87%) Strand = Plus / Plus Query: 363 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 422 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 423 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 475 |||||| ||| |||| | ||| |||||||||||||||||| ||||| ||||| Sbjct: 626 ctaaggtccccaaatcattgctaagtgataaaggaggtgggagtgcagagaca 678
>gb|DQ366719.1| Uncultured Prochlorococcus marinus clone ASNC729 genomic sequence Length = 38521 Score = 242 bits (122), Expect = 9e-61 Identities = 185/206 (89%) Strand = Plus / Minus Query: 36 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 95 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 20224 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 20165 Query: 96 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 155 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 20164 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 20105 Query: 156 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 215 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 20104 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 20045 Query: 216 ggttctccccgaaatgcgttgaggcg 241 ||||||||||||||| |||||||||| Sbjct: 20044 ggttctccccgaaatacgttgaggcg 20019 Score = 87.7 bits (44), Expect = 3e-14 Identities = 77/88 (87%) Strand = Plus / Minus Query: 376 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 435 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 19903 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 19844 Query: 436 atgaccgctcagtgataaaggaggtggg 463 || | |||| |||||||||||||||||| Sbjct: 19843 attaacgctaagtgataaaggaggtggg 19816 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 277 tttcggtgcgggctgcgcgagcggtaccaaatcga 311 ||||||||||||||||| |||||||||||||||| Sbjct: 19981 tttcggtgcgggctgcgaaagcggtaccaaatcga 19947
>gb|DQ366714.1| Uncultured Prochlorococcus marinus clone ASNC2150 genomic sequence Length = 37884 Score = 242 bits (122), Expect = 9e-61 Identities = 185/206 (89%) Strand = Plus / Minus Query: 36 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 95 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 1978 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 1919 Query: 96 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 155 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 1918 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 1859 Query: 156 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 215 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 1858 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 1799 Query: 216 ggttctccccgaaatgcgttgaggcg 241 ||||||||||||||| |||||||||| Sbjct: 1798 ggttctccccgaaatacgttgaggcg 1773 Score = 87.7 bits (44), Expect = 3e-14 Identities = 77/88 (87%) Strand = Plus / Minus Query: 376 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 435 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 1657 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 1598 Query: 436 atgaccgctcagtgataaaggaggtggg 463 || | |||| |||||||||||||||||| Sbjct: 1597 attaacgctaagtgataaaggaggtggg 1570 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 277 tttcggtgcgggctgcgcgagcggtaccaaatcga 311 ||||||||||||||||| |||||||||||||||| Sbjct: 1735 tttcggtgcgggctgcgaaagcggtaccaaatcga 1701
>emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; segment 1/5 Length = 349742 Score = 242 bits (122), Expect = 9e-61 Identities = 185/206 (89%) Strand = Plus / Plus Query: 36 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 95 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 315722 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 315781 Query: 96 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 155 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 315782 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 315841 Query: 156 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 215 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 315842 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 315901 Query: 216 ggttctccccgaaatgcgttgaggcg 241 ||||||||||||||| |||||||||| Sbjct: 315902 ggttctccccgaaatacgttgaggcg 315927 Score = 87.7 bits (44), Expect = 3e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 376 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 435 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 316043 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 316102 Query: 436 atgaccgctcagtgataaaggaggtggg 463 || | |||| |||||||||||||||||| Sbjct: 316103 attaacgctaagtgataaaggaggtggg 316130 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 277 tttcggtgcgggctgcgcgagcggtaccaaatcga 311 ||||||||||||||||| |||||||||||||||| Sbjct: 315965 tttcggtgcgggctgcgaaagcggtaccaaatcga 315999
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 242 bits (122), Expect = 9e-61 Identities = 265/307 (86%), Gaps = 8/307 (2%) Strand = Plus / Plus Query: 36 agcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccgaacctgggtg 92 ||||||||||||||| ||||||||| || |||||| |||||||||||||||| ||||| Sbjct: 654 agcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccgaacccgggtg 713 Query: 93 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 152 |||||| ||||||||||||||||||||| | | || ||| ||||||||||||||| ||| Sbjct: 714 atctattcatgaccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgat 773 Query: 153 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 212 |||||| |||| |||||||||||||| |||||| ||||| ||| |||||| | |||||| Sbjct: 774 gttgaaaaatcggcggatgagttgtgaataggggagaaattccaatcgaactcggagcta 833 Query: 213 gctggttctccccgaaatgcgttgaggcgcagcagt--tgactggac-atctaggggtaa 269 ||||| ||||||||||||||||||||||||||| || || || || |||| ||||||| Sbjct: 834 gctggatctccccgaaatgcgttgaggcgcagcggtaacga-tgaactatcttggggtaa 892 Query: 270 agc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 328 ||| ||||||||| ||||||||||| || |||||||| ||| ||||||||| |||||| Sbjct: 893 agctactgtttcgatgcgggctgcgaaagtggtaccaagtcgtggcaaactcagaataca 952 Query: 329 agatatg 335 ||||||| Sbjct: 953 agatatg 959 Score = 85.7 bits (43), Expect = 1e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 384 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatg 438 ||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 2707 aagcttcattgtcaagagggaaacagcccagatcaccagctaaggcccctaaatg 2761
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 242 bits (122), Expect = 9e-61 Identities = 185/206 (89%) Strand = Plus / Plus Query: 36 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 95 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 1659136 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 1659195 Query: 96 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 155 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 1659196 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 1659255 Query: 156 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 215 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1659256 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 1659315 Query: 216 ggttctccccgaaatgcgttgaggcg 241 ||||||||||||||| |||||||||| Sbjct: 1659316 ggttctccccgaaatacgttgaggcg 1659341 Score = 242 bits (122), Expect = 9e-61 Identities = 185/206 (89%) Strand = Plus / Minus Query: 36 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 95 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 1049608 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 1049549 Query: 96 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 155 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 1049548 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 1049489 Query: 156 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 215 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1049488 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 1049429 Query: 216 ggttctccccgaaatgcgttgaggcg 241 ||||||||||||||| |||||||||| Sbjct: 1049428 ggttctccccgaaatacgttgaggcg 1049403 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 263 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 322 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1659364 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1659423 Query: 323 aatac 327 ||||| Sbjct: 1659424 aatac 1659428 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 263 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 322 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1049380 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1049321 Query: 323 aatac 327 ||||| Sbjct: 1049320 aatac 1049316 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Plus Query: 363 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 422 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1659443 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1659502 Query: 423 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 475 |||||| || |||| | || |||||||||||||||||| ||||| ||||| Sbjct: 1659503 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagaca 1659555 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 363 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 422 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1049301 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1049242 Query: 423 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 475 |||||| || |||| | || |||||||||||||||||| ||||| ||||| Sbjct: 1049241 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagaca 1049189
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 242 bits (122), Expect = 9e-61 Identities = 188/210 (89%) Strand = Plus / Plus Query: 36 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 95 ||||||||| ||||| ||||||||| |||| ||||||||||||||||||| |||||||| Sbjct: 633 agcgaaagcaagtctgaatagggcgtatgtccctgcttatggacccgaacccgggtgatc 692 Query: 96 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 155 || |||||||||||||||||||| | ||| ||| ||||||||||||||| |||||| Sbjct: 693 taaccatgaccaggatgaagcttcagtaaaatgaagtggaggtccgaaccgaccgatgtt 752 Query: 156 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 215 ||| |||| || ||||||||||||||||||||||||||||| |||||| | ||||||||| Sbjct: 753 gaaaaatcggctgatgagttgtggttaggggtgaaatgccaatcgaactcggagctagct 812 Query: 216 ggttctccccgaaatgcgttgaggcgcagc 245 |||||||||||||||||||||||||||||| Sbjct: 813 ggttctccccgaaatgcgttgaggcgcagc 842 Score = 137 bits (69), Expect = 4e-29 Identities = 102/113 (90%) Strand = Plus / Plus Query: 363 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 422 |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccat 1003 Query: 423 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 475 |||||||||| ||||||||||| |||| ||||||||| | ||||||||||| Sbjct: 1004 ctaaggccccaaaatgaccgctaagtggcaaaggaggtaagagtgcaaagaca 1056 Score = 103 bits (52), Expect = 5e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 258 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 317 |||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||| Sbjct: 859 atctaggggtaaagcactgtatcggtgcgggctgcgaaagcggtaccaaatcgtaacaaa 918 Query: 318 ctctgaatactagata 333 |||||||||||||||| Sbjct: 919 ctctgaatactagata 934
>emb|X00512.1|ANRN03 Anacystis nidulans 23S rRNA gene and flanking regions Length = 3282 Score = 242 bits (122), Expect = 9e-61 Identities = 185/206 (89%) Strand = Plus / Plus Query: 36 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 95 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 898 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 957 Query: 96 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 155 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 958 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 1017 Query: 156 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 215 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1018 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 1077 Query: 216 ggttctccccgaaatgcgttgaggcg 241 ||||||||||||||| |||||||||| Sbjct: 1078 ggttctccccgaaatacgttgaggcg 1103 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 263 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 322 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1126 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1185 Query: 323 aatac 327 ||||| Sbjct: 1186 aatac 1190 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Plus Query: 363 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 422 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1205 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1264 Query: 423 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 475 |||||| || |||| | || |||||||||||||||||| ||||| ||||| Sbjct: 1265 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagaca 1317
>emb|AM084273.1| Paulinella chromatophora plastid 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain M 0880 Length = 4934 Score = 242 bits (122), Expect = 9e-61 Identities = 185/206 (89%) Strand = Plus / Plus Query: 36 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 95 ||||||||||||||| ||||||||||| |||| | |||| |||||||||| |||||||| Sbjct: 2851 agcgaaagcgagtctgaatagggcgatggtcagtatttatagacccgaacccgggtgatc 2910 Query: 96 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 155 || ||||| |||||||||||||||| ||| || | | |||||||||||||||||||||| Sbjct: 2911 taaccatggccaggatgaagcttgggtgataccacgtggaggtccgaaccgactgatgtt 2970 Query: 156 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 215 ||| |||||||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 2971 gaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 3030 Query: 216 ggttctccccgaaatgcgttgaggcg 241 ||||||||||||||| |||| ||||| Sbjct: 3031 ggttctccccgaaatacgtttaggcg 3056 Score = 95.6 bits (48), Expect = 1e-16 Identities = 78/88 (88%) Strand = Plus / Plus Query: 376 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 435 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| |||||| Sbjct: 3172 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccctaa 3231 Query: 436 atgaccgctcagtgataaaggaggtggg 463 || | |||| |||||||||||||||||| Sbjct: 3232 ataagcgctaagtgataaaggaggtggg 3259 Score = 91.7 bits (46), Expect = 2e-15 Identities = 62/66 (93%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 263 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 321 |||||||||| ||||||||||| ||||||||| |||||||||||||||||| |||||||| Sbjct: 3079 ggggtaaagccactgtttcggtacgggctgcgagagcggtaccaaatcgagacaaactct 3138 Query: 322 gaatac 327 |||||| Sbjct: 3139 gaatac 3144
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 242 bits (122), Expect = 9e-61 Identities = 185/206 (89%) Strand = Plus / Minus Query: 36 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 95 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 2657650 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 2657591 Query: 96 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 155 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 2657590 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 2657531 Query: 156 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 215 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 2657530 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 2657471 Query: 216 ggttctccccgaaatgcgttgaggcg 241 ||||||||||||||| |||||||||| Sbjct: 2657470 ggttctccccgaaatacgttgaggcg 2657445 Score = 242 bits (122), Expect = 9e-61 Identities = 185/206 (89%) Strand = Plus / Plus Query: 36 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 95 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 571271 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 571330 Query: 96 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 155 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 571331 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 571390 Query: 156 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 215 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 571391 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 571450 Query: 216 ggttctccccgaaatgcgttgaggcg 241 ||||||||||||||| |||||||||| Sbjct: 571451 ggttctccccgaaatacgttgaggcg 571476 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 263 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 322 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 2657422 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 2657363 Query: 323 aatac 327 ||||| Sbjct: 2657362 aatac 2657358 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 263 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 322 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 571499 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 571558 Query: 323 aatac 327 ||||| Sbjct: 571559 aatac 571563 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 363 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 422 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 2657343 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 2657284 Query: 423 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 475 |||||| || |||| | || |||||||||||||||||| ||||| ||||| Sbjct: 2657283 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagaca 2657231 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Plus Query: 363 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 422 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 571578 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 571637 Query: 423 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 475 |||||| || |||| | || |||||||||||||||||| ||||| ||||| Sbjct: 571638 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagaca 571690
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 240 bits (121), Expect = 3e-60 Identities = 236/272 (86%), Gaps = 3/272 (1%) Strand = Plus / Plus Query: 64 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 123 |||||| |||||||||||||||| |||||||||| |||| |||||||||| |||| | Sbjct: 856 gtcacttcttatggacccgaacccgggtgatctaatcatggccaggatgaaatttgggta 915 Query: 124 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 183 | || || | ||||||||||||||| ||||||||| |||| |||||||||||||| |||| Sbjct: 916 acaccaaccggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtgattag 975 Query: 184 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 243 ||| ||||| ||| |||||| | ||||||||||| ||||||||||||||||||||||||| Sbjct: 976 gggagaaattccaatcgaactcggagctagctggatctccccgaaatgcgttgaggcgca 1035 Query: 244 gcagtt--gactggacatctaggggtaaagc-actgtttcggtgcgggctgcgcgagcgg 300 || ||| || | |||||||||||||||| ||||||||||||||||||||| ||||| Sbjct: 1036 gcggttaagatttaccatctaggggtaaagcgactgtttcggtgcgggctgcgaaagcgg 1095 Query: 301 taccaaatcgaggcaaactctgaatactagat 332 |||||| ||| ||||||||| ||||||||||| Sbjct: 1096 taccaagtcgtggcaaactcagaatactagat 1127 Score = 73.8 bits (37), Expect = 5e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 398 agagggaaacagcccggatcaccagctaaggcccctaaatg 438 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1177 agagggaaacagcccagatcaccagctaaggcccctaaatg 1217
>gb|AF041468.1| Guillardia theta complete plastid genome Length = 121524 Score = 240 bits (121), Expect = 3e-60 Identities = 233/269 (86%), Gaps = 1/269 (0%) Strand = Plus / Minus Query: 62 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgga 121 ||||||||| ||| |||||||||| || ||||||| ||||| |||| |||||||| | Sbjct: 39762 ttgtcactgtttacagacccgaacccggatgatctaaccatggccagcgtgaagcttagg 39703 Query: 122 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 181 | | |||||| ||||| ||||||||||||||||||| |||||||||||||| ||||||| Sbjct: 39702 taacactaagtggaggtgcgaaccgactgatgttgaaaaatcagcggatgagctgtggtt 39643 Query: 182 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 241 ||||||||||||||| ||||| || ||||||||||||||||||||||||||||| ||||| Sbjct: 39642 aggggtgaaatgccaatcgaatccggagctagctggttctccccgaaatgcgtttaggcg 39583 Query: 242 cagcagttgactggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||| |||| || | |||||||||||||||||||||||||||||||| |||| Sbjct: 39582 cagcgattgatgctccaacttaggggtaaagcactgtttcggtgcgggctgctaacgcgg 39523 Query: 301 taccaaatcgaggcaaactctgaatacta 329 ||||||||||| ||||||||||||||||| Sbjct: 39522 taccaaatcgatgcaaactctgaatacta 39494 Score = 240 bits (121), Expect = 3e-60 Identities = 233/269 (86%), Gaps = 1/269 (0%) Strand = Plus / Plus Query: 62 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgga 121 ||||||||| ||| |||||||||| || ||||||| ||||| |||| |||||||| | Sbjct: 19638 ttgtcactgtttacagacccgaacccggatgatctaaccatggccagcgtgaagcttagg 19697 Query: 122 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 181 | | |||||| ||||| ||||||||||||||||||| |||||||||||||| ||||||| Sbjct: 19698 taacactaagtggaggtgcgaaccgactgatgttgaaaaatcagcggatgagctgtggtt 19757 Query: 182 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 241 ||||||||||||||| ||||| || ||||||||||||||||||||||||||||| ||||| Sbjct: 19758 aggggtgaaatgccaatcgaatccggagctagctggttctccccgaaatgcgtttaggcg 19817 Query: 242 cagcagttgactggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcgg 300 |||| |||| || | |||||||||||||||||||||||||||||||| |||| Sbjct: 19818 cagcgattgatgctccaacttaggggtaaagcactgtttcggtgcgggctgctaacgcgg 19877 Query: 301 taccaaatcgaggcaaactctgaatacta 329 ||||||||||| ||||||||||||||||| Sbjct: 19878 taccaaatcgatgcaaactctgaatacta 19906 Score = 79.8 bits (40), Expect = 7e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 376 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 435 ||||||||||||| ||| ||| | ||||||||||||| || |||||| |||||||||||| Sbjct: 39468 tgggggataagctccattgtcaaaagggaaacagcccagaccaccagttaaggcccctaa 39409 Query: 436 atgaccgctcagtgataaaggaggtggg 463 || | ||| |||||||||||| ||||| Sbjct: 39408 ataattgctaagtgataaaggatgtggg 39381 Score = 79.8 bits (40), Expect = 7e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 376 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 435 ||||||||||||| ||| ||| | ||||||||||||| || |||||| |||||||||||| Sbjct: 19932 tgggggataagctccattgtcaaaagggaaacagcccagaccaccagttaaggcccctaa 19991 Query: 436 atgaccgctcagtgataaaggaggtggg 463 || | ||| |||||||||||| ||||| Sbjct: 19992 ataattgctaagtgataaaggatgtggg 20019
>emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 45.88 Length = 3065 Score = 240 bits (121), Expect = 3e-60 Identities = 221/253 (87%), Gaps = 1/253 (0%) Strand = Plus / Plus Query: 78 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 137 ||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| |||| Sbjct: 1132 acccgaacccgggtgatctaaccatggccagggtgaagcttgggtaaaactaagtggagg 1191 Query: 138 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 197 |||||| || ||||||||| |||| |||||||||||||||||| |||||||||||| Sbjct: 1192 cccgaactgatcgatgttgaaaaatcgtcggatgagttgtggttagcggtgaaatgccaa 1251 Query: 198 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 257 |||||||| ||||||||||||||||||||||||| ||||||||||||| ||| | | Sbjct: 1252 tcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttaagattat 1311 Query: 258 atc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 316 | | ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1312 aacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaa 1371 Query: 317 actctgaatacta 329 ||| |||||||| Sbjct: 1372 actaagaatacta 1384 Score = 81.8 bits (41), Expect = 2e-12 Identities = 80/93 (86%) Strand = Plus / Plus Query: 376 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 435 ||||||||||||| ||| ||| ||||||||||||||| || |||||| ||||||||| || Sbjct: 1410 tgggggataagctccattgtcaagagggaaacagcccagaccaccagttaaggccccaaa 1469 Query: 436 atgaccgctcagtgataaaggaggtgggggtgc 468 || | ||| |||| ||||||||||||| |||| Sbjct: 1470 ataatagctaagtggtaaaggaggtgggagtgc 1502
>emb|Z15152.1|CHCPRRNL Chloroplast Chlamydomonas pitschmannii rrnL gene Length = 3017 Score = 240 bits (121), Expect = 3e-60 Identities = 268/314 (85%), Gaps = 5/314 (1%) Strand = Plus / Plus Query: 26 ccggngccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 83 |||| ||| |||||||||| ||||||||||||||||| |||||| ||||||||||||| Sbjct: 718 ccggagccttagcgaaagcaagtcttaatagggcgataaagtcacttcttatggacccga 777 Query: 84 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 143 ||| ||||||||||| |||| |||||||||||||||| | | || || |||||||||| Sbjct: 778 acccgggtgatctattcatggccaggatgaagcttgggtaacacctagtggaggtccgaa 837 Query: 144 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 203 ||||| ||||||||| |||| ||||||||| |||| |||||| ||||| ||| |||||| Sbjct: 838 ccgaccgatgttgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaac 897 Query: 204 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg--actggacatct 261 | ||||||||||| ||||||||||||||||||||||||||| || | | | |||| Sbjct: 898 tcggagctagctggatctccccgaaatgcgttgaggcgcagcggtggctatgagctatct 957 Query: 262 aggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 320 || |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||||||| Sbjct: 958 agaggtaaagcgactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaaactc 1017 Query: 321 tgaatactagatat 334 ||||||||||||| Sbjct: 1018 agaatactagatat 1031 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 398 agagggaaacagcccggatcaccagctaaggcccctaaatga 439 ||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1079 agagggaaacagcccagatcaccagctaaggcccctaaatga 1120
>emb|X76084.1|CHNERRNA N.eucaryotum chloroplast 16S rRNA, tRNA-Ile, tRNA-Ala and 23S rRNA genes Length = 5431 Score = 240 bits (121), Expect = 3e-60 Identities = 229/261 (87%), Gaps = 3/261 (1%) Strand = Plus / Plus Query: 77 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 136 |||||||||| |||||||||| |||||||||||||||||||||| | | || | | || Sbjct: 2719 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtaataccacgtgaag 2778 Query: 137 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 196 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 2779 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 2838 Query: 197 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 256 |||||| | ||||||||||||||||||||||||||||||||||||| | || | || Sbjct: 2839 gtcgaactcggagctagctggttctccccgaaatgcgttgaggcgca-cggtcagcaaga 2897 Query: 257 c-atctaggggt-aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 314 | |||||||||| |||||||||||||||||||||| ||| ||| ||||||||||| ||| Sbjct: 2898 ctatctaggggtaaaagcactgtttcggtgcgggccgcgaaagctgtaccaaatcgtggc 2957 Query: 315 aaactctgaatactagatatg 335 ||||||||||||||||||||| Sbjct: 2958 aaactctgaatactagatatg 2978 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 362 ggccagtgagacgatgggggataagcttcat 392 |||||||||||| ||||||||||||||||| Sbjct: 2988 ggccagtgagacagtgggggataagcttcat 3018
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 236 bits (119), Expect = 5e-59 Identities = 185/207 (89%) Strand = Plus / Minus Query: 35 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 94 |||||||||||||||| ||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 1775848 tagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaacccgggtgat 1775789 Query: 95 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 154 ||| ||||| |||||||||||||||| ||| || ||| ||||||||||||||||| || Sbjct: 1775788 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactggcgt 1775729 Query: 155 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 214 |||| | ||||||||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 1775728 tgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 1775669 Query: 215 tggttctccccgaaatgcgttgaggcg 241 |||||||||||||||| |||||||||| Sbjct: 1775668 tggttctccccgaaatacgttgaggcg 1775642 Score = 236 bits (119), Expect = 5e-59 Identities = 185/207 (89%) Strand = Plus / Plus Query: 35 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 94 |||||||||||||||| ||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 376221 tagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaacccgggtgat 376280 Query: 95 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 154 ||| ||||| |||||||||||||||| ||| || ||| ||||||||||||||||| || Sbjct: 376281 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactggcgt 376340 Query: 155 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 214 |||| | ||||||||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 376341 tgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 376400 Query: 215 tggttctccccgaaatgcgttgaggcg 241 |||||||||||||||| |||||||||| Sbjct: 376401 tggttctccccgaaatacgttgaggcg 376427 Score = 87.7 bits (44), Expect = 3e-14 Identities = 77/88 (87%) Strand = Plus / Minus Query: 376 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 435 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 1775526 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 1775467 Query: 436 atgaccgctcagtgataaaggaggtggg 463 || | | || |||||||||||||||||| Sbjct: 1775466 atcaacactaagtgataaaggaggtggg 1775439 Score = 87.7 bits (44), Expect = 3e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 376 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 435 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 376543 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 376602 Query: 436 atgaccgctcagtgataaaggaggtggg 463 || | | || |||||||||||||||||| Sbjct: 376603 atcaacactaagtgataaaggaggtggg 376630 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 277 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 327 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 1775604 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 1775554 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 277 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 327 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 376465 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 376515
>gb|AY033308.1| Uncultured Synechococcus sp. MB11E09 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4137 Score = 236 bits (119), Expect = 5e-59 Identities = 185/207 (89%) Strand = Plus / Plus Query: 35 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 94 |||||||||||||||| ||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 2883 tagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaacccgggtgat 2942 Query: 95 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 154 ||| ||||| |||||||||||||||| ||| || ||| ||||||||||||||||| || Sbjct: 2943 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactggcgt 3002 Query: 155 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 214 |||| | ||||||||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 3003 tgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 3062 Query: 215 tggttctccccgaaatgcgttgaggcg 241 |||||||||||||||| |||||||||| Sbjct: 3063 tggttctccccgaaatacgttgaggcg 3089 Score = 79.8 bits (40), Expect = 7e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 376 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 435 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 3205 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 3264 Query: 436 atgaccgctcagtgataaaggaggtggg 463 || | | || |||||||| ||||||||| Sbjct: 3265 atcaacactaagtgataagggaggtggg 3292 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 277 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 327 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 3127 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 3177
>gb|DQ313008.1| Uncultured bacterium clone 3O7D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 236 bits (119), Expect = 5e-59 Identities = 185/207 (89%) Strand = Plus / Plus Query: 35 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 94 |||||||||||||||| ||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 493 tagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaacccgggtgat 552 Query: 95 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 154 ||| ||||| |||||||||||||||| ||| || ||| ||||||||||||||||| || Sbjct: 553 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactggcgt 612 Query: 155 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 214 |||| | ||||||||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 613 tgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 672 Query: 215 tggttctccccgaaatgcgttgaggcg 241 |||||||||||||||| |||||||||| Sbjct: 673 tggttctccccgaaatacgttgaggcg 699
>gb|DQ174248.1| Phaeodactylum tricornutum 16S ribosomal RNA, tRNA-Ile, tRNA-Ala, 23S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast Length = 5026 Score = 234 bits (118), Expect = 2e-58 Identities = 195/221 (88%) Strand = Plus / Plus Query: 25 accggngccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 84 ||||| ||| ||| ||||||||| || ||||||||| ||||||||| |||| |||||||| Sbjct: 2370 accggagccatagtgaaagcgagcctgaatagggcgtttgtcactggttatagacccgaa 2429 Query: 85 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 144 || || ||||||| ||||| ||||| |||||||| | | | |||||| |||| |||||| Sbjct: 2430 cccggatgatctaaccatggccaggttgaagcttaggtaatactaagtggaggaccgaac 2489 Query: 145 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 204 |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2490 cgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccaatcgaatt 2549 Query: 205 cagagctagctggttctccccgaaatgcgttgaggcgcagc 245 | ||||||||||||||||||||||||||||| ||||||||| Sbjct: 2550 cggagctagctggttctccccgaaatgcgtttaggcgcagc 2590 Score = 109 bits (55), Expect = 8e-21 Identities = 97/111 (87%) Strand = Plus / Plus Query: 365 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 424 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| | Sbjct: 2691 cagtgagactgtgggggataagctccattgtcaagagggaaacagcccagagcaccagtt 2750 Query: 425 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 475 ||||||||||||| | ||| |||||||||||||||||| ||||| ||||| Sbjct: 2751 aaggcccctaaataattgctaagtgataaaggaggtgggagtgcatagaca 2801
>gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA (rrnL) gene, partial sequence; and rrnL and putative site-specific DNA endonuclease (rrnL) genes, complete cds; chloroplast genes for chloroplast products Length = 4502 Score = 234 bits (118), Expect = 2e-58 Identities = 254/297 (85%), Gaps = 3/297 (1%) Strand = Plus / Plus Query: 36 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 95 ||||||||| ||||| ||||||||| |||||||| ||||||||||||||||| |||||| Sbjct: 673 agcgaaagcaagtctgaatagggcgcttgtcactttttatggacccgaacctgagtgatc 732 Query: 96 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 155 || ||||| |||||||||| ||||| | | || || || | |||||||||| |||||| Sbjct: 733 taaccatggccaggatgaatcttgggtaacaccaaatggaagaccgaaccgaccgatgtt 792 Query: 156 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 215 ||| |||| ||||||||| |||||||||||||||||| ||| |||||| ||||||||||| Sbjct: 793 gaaaaatcggcggatgagctgtggttaggggtgaaattccagtcgaactcagagctagct 852 Query: 216 ggttctccccgaaatgcgttgaggcgcagcagttga--ctggac-atctaggggtaaagc 272 || ||||| ||||||| ||||||||||||| ||||| ||| | | |||||||||||| Sbjct: 853 ggatctcctcgaaatgtgttgaggcgcagcggttgatgatgggctagttaggggtaaagc 912 Query: 273 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 329 ||||||||||||||||||||| |||||||| |||||| ||||||| |||||||| Sbjct: 913 actgtttcggtgcgggctgcgaaagcggtactaaatcgtcgcaaactaagaatacta 969 Score = 99.6 bits (50), Expect = 8e-18 Identities = 77/86 (89%) Strand = Plus / Plus Query: 376 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 435 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 999 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 1058 Query: 436 atgaccgctcagtgataaaggaggtg 461 ||| ||||| |||| |||||||||| Sbjct: 1059 atggccgctaagtggcaaaggaggtg 1084
>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome Length = 195867 Score = 234 bits (118), Expect = 2e-58 Identities = 254/297 (85%), Gaps = 3/297 (1%) Strand = Plus / Plus Query: 36 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 95 ||||||||| ||||| ||||||||| |||||||| |||||||||||||||| | |||||| Sbjct: 192504 agcgaaagcaagtctgaatagggcgcttgtcacttcttatggacccgaacccgagtgatc 192563 Query: 96 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 155 || ||||| |||||||||| ||||| | | || || || | |||||||||| |||||| Sbjct: 192564 taaccatggccaggatgaatcttgggtaacaccaaatggaagaccgaaccgaccgatgtt 192623 Query: 156 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 215 ||| |||| ||||||||| |||||||||||||||||| ||| |||||| | ||||||||| Sbjct: 192624 gaaaaatcggcggatgagctgtggttaggggtgaaattccagtcgaactcggagctagct 192683 Query: 216 ggttctccccgaaatgcgttgaggcgcagcagttga--ctggac-atctaggggtaaagc 272 || ||||| ||||||| ||||||||||||| ||||| ||| | || |||||||||||| Sbjct: 192684 ggatctcctcgaaatgtgttgaggcgcagcggttgatgatgggctatttaggggtaaagc 192743 Query: 273 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 329 ||||||||||||||||||||| |||||||| |||||| ||||||| |||||||| Sbjct: 192744 actgtttcggtgcgggctgcgaaagcggtactaaatcgtcgcaaactaagaatacta 192800 Score = 234 bits (118), Expect = 2e-58 Identities = 254/297 (85%), Gaps = 3/297 (1%) Strand = Plus / Minus Query: 36 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 95 ||||||||| ||||| ||||||||| |||||||| |||||||||||||||| | |||||| Sbjct: 144278 agcgaaagcaagtctgaatagggcgcttgtcacttcttatggacccgaacccgagtgatc 144219 Query: 96 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 155 || ||||| |||||||||| ||||| | | || || || | |||||||||| |||||| Sbjct: 144218 taaccatggccaggatgaatcttgggtaacaccaaatggaagaccgaaccgaccgatgtt 144159 Query: 156 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 215 ||| |||| ||||||||| |||||||||||||||||| ||| |||||| | ||||||||| Sbjct: 144158 gaaaaatcggcggatgagctgtggttaggggtgaaattccagtcgaactcggagctagct 144099 Query: 216 ggttctccccgaaatgcgttgaggcgcagcagttga--ctggac-atctaggggtaaagc 272 || ||||| ||||||| ||||||||||||| ||||| ||| | || |||||||||||| Sbjct: 144098 ggatctcctcgaaatgtgttgaggcgcagcggttgatgatgggctatttaggggtaaagc 144039 Query: 273 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 329 ||||||||||||||||||||| |||||||| |||||| ||||||| |||||||| Sbjct: 144038 actgtttcggtgcgggctgcgaaagcggtactaaatcgtcgcaaactaagaatacta 143982 Score = 99.6 bits (50), Expect = 8e-18 Identities = 77/86 (89%) Strand = Plus / Plus Query: 376 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 435 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 192830 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 192889 Query: 436 atgaccgctcagtgataaaggaggtg 461 ||| ||||| |||| |||||||||| Sbjct: 192890 atggccgctaagtggcaaaggaggtg 192915 Score = 99.6 bits (50), Expect = 8e-18 Identities = 77/86 (89%) Strand = Plus / Minus Query: 376 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 435 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 143952 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 143893 Query: 436 atgaccgctcagtgataaaggaggtg 461 ||| ||||| |||| |||||||||| Sbjct: 143892 atggccgctaagtggcaaaggaggtg 143867
>gb|L42862.1|PNFCPRGOL Pycnococcus sp. CCMP 1203 large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2664 Score = 234 bits (118), Expect = 2e-58 Identities = 256/300 (85%), Gaps = 4/300 (1%) Strand = Plus / Plus Query: 36 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 95 ||||||||||||||| | |||||| ||||| || ||| |||||||||| |||||||| Sbjct: 642 agcgaaagcgagtctgataagggcgtctgtcattggctatagacccgaacccgggtgatc 701 Query: 96 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 155 || || | ||||||||| ||||| | | |||||| ||||||||||||||| |||||| Sbjct: 702 taaccgcggtcaggatgaaacttgggtaagactaagtggaggtccgaaccgaccgatgtt 761 Query: 156 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 215 ||| |||| |||||||| |||||||||||||||||||||| |||||| | ||||||||| Sbjct: 762 gaaaaatcggcggatgaactgtggttaggggtgaaatgccaatcgaactcggagctagct 821 Query: 216 ggttctccccgaaatgcgttgaggcgcagcagtt---gactggaca-tctaggggtaaag 271 |||||||||||||||||||||||||||||| ||| || | | | |||||||||| || Sbjct: 822 ggttctccccgaaatgcgttgaggcgcagcggttgatgattaggctgtctaggggtagag 881 Query: 272 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 331 |||||| ||||||||||||||| |||||||||||||||| |||||||| |||||||||| Sbjct: 882 cactgtctcggtgcgggctgcgagagcggtaccaaatcgtagcaaactccgaatactaga 941 Score = 101 bits (51), Expect = 2e-18 Identities = 87/99 (87%) Strand = Plus / Plus Query: 363 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 422 ||||||||||| ||||||||||||| ||| ||||||||||||||||||| || || | | Sbjct: 954 gccagtgagactgtgggggataagctccattgtcgagagggaaacagcccagaccatcgg 1013 Query: 423 ctaaggcccctaaatgaccgctcagtgataaaggaggtg 461 ||||||||||||||||| || |||||||||||||||| Sbjct: 1014 ctaaggcccctaaatgattactaagtgataaaggaggtg 1052
>gb|M36158.1|CHLCPG C.ellipsoidea chloroplast 23S ribosomal RNA gene, complete sequence Length = 3359 Score = 234 bits (118), Expect = 2e-58 Identities = 244/279 (87%), Gaps = 9/279 (3%) Strand = Plus / Plus Query: 63 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 122 ||||||| ||||| ||||||||| |||||||||| ||||| |||||||||||||||| | Sbjct: 786 tgtcacttcttatccacccgaacccgggtgatctaaccatggccaggatgaagcttgggt 845 Query: 123 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 182 |||| ||| ||||||||||||||| ||||||||| |||| ||||||||| |||||||| Sbjct: 846 aaaaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggtta 905 Query: 183 ggggtgaaatgccactcgaacccagagctagctggttctccccg-aaatgcgttgaggcg 241 |||||||||||||| |||||| | ||||||||| |||||||||| ||||||||||| ||| Sbjct: 906 ggggtgaaatgccaatcgaactc-gagctagct-gttctccccgtaaatgcgttga-gcg 962 Query: 242 cagcagt---tgact--ggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 296 |||| || ||||| || |||||||||||||||||||||||||||||||||||| || Sbjct: 963 cagcggttgatgacttgggctatctaggggtaaagcactgtttcggtgcgggctgcgaga 1022 Query: 297 gcggtaccaaatcgaggcaaactctgaatactagatatg 335 |||||||||||||| ||||||| ||||||||| |||| Sbjct: 1023 gcggtaccaaatcgtagcaaactaagaatactaggtatg 1061 Score = 129 bits (65), Expect = 9e-27 Identities = 90/97 (92%), Gaps = 1/97 (1%) Strand = Plus / Plus Query: 364 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 423 ||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| Sbjct: 1073 ccagtgagacggtgggggataagcttcatcgtcgagagggaaaca-cccagatcaccagc 1131 Query: 424 taaggcccctaaatgaccgctcagtgataaaggaggt 460 ||||||||||||||| ||||| |||| ||||||||| Sbjct: 1132 taaggcccctaaatggccgctaagtggcaaaggaggt 1168
>gb|AY333417.1| Microcystis sp. 'Brown' 16S ribosomal RNA gene, partial sequence; tRNA-Ile gene and 16S-23S ribosomal RNA intergenic spacer, complete sequences; and 23S ribosomal RNA gene, partial sequence Length = 3321 Score = 232 bits (117), Expect = 8e-58 Identities = 221/254 (87%), Gaps = 5/254 (1%) Strand = Plus / Plus Query: 77 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 136 |||||||||| |||||||||| ||||| |||||||||||||||| | |||| ||| ||| Sbjct: 2216 gacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaaccaagtggag 2275 Query: 137 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 196 ||||||||||||| |||||||| ||| |||||||||| |||||||||||||||||||||| Sbjct: 2276 gtccgaaccgactaatgttgaaaaattagcggatgagctgtggttaggggtgaaatgcca 2335 Query: 197 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 256 |||||| | ||||||||||||||||||||||||| ||||||||||||| || | |||| Sbjct: 2336 atcgaactcggagctagctggttctccccgaaatgtgttgaggcgcagcggt--agtgga 2393 Query: 257 catcta---ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 313 | || ||||||||||||||||||| |||||||| | || ||||||||| ||||| Sbjct: 2394 agtttagtcggggtaaagcactgtttcgccgcgggctgggagaccggtaccaaggcgagg 2453 Query: 314 caaactctgaatac 327 |||||||||||||| Sbjct: 2454 caaactctgaatac 2467 Score = 115 bits (58), Expect = 1e-22 Identities = 94/106 (88%) Strand = Plus / Plus Query: 364 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 423 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 2482 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 2541 Query: 424 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 469 ||||| ||| |||||| || ||||| |||||||||||| ||||| Sbjct: 2542 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgca 2587
>gb|AY673996.1| Gracilaria tenuistipitata var. liui chloroplast, complete genome Length = 183883 Score = 232 bits (117), Expect = 8e-58 Identities = 223/256 (87%), Gaps = 3/256 (1%) Strand = Plus / Minus Query: 77 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 136 |||||||||| || ||||||| ||||| ||||| |||||||| | | | |||||| ||| Sbjct: 27136 gacccgaacccggatgatctagccatggccagggtgaagcttaggtaacactaagtggag 27077 Query: 137 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 196 |||||||||||||||||||||| |||||||||| ||| ||||| |||||||||||||||| Sbjct: 27076 gtccgaaccgactgatgttgaaaaatcagcggacgagctgtggctaggggtgaaatgcca 27017 Query: 197 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ctg 254 ||||| || ||||||||||||||||||||||||||||| |||||||| |||| || Sbjct: 27016 atcgaatccggagctagctggttctccccgaaatgcgttttggcgcagcgattgatgcta 26957 Query: 255 gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 314 | | ||||||||||||||||||||||||||||||| || || ||||||||||||| || Sbjct: 26956 ta-acctaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatcgatgc 26898 Query: 315 aaactctgaatactag 330 |||||||||||||||| Sbjct: 26897 aaactctgaatactag 26882 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Minus Query: 365 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 424 ||||||||| ||||||||||||||||| ||| | ||||||||||||| || || ||||| Sbjct: 26868 cagtgagacagtgggggataagcttcattgtcaaaagggaaacagcccagaccatcagct 26809 Query: 425 aaggcccctaaat 437 ||||||||||||| Sbjct: 26808 aaggcccctaaat 26796 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,792,089 Number of Sequences: 3902068 Number of extensions: 2792089 Number of successful extensions: 55547 Number of sequences better than 10.0: 2635 Number of HSP's better than 10.0 without gapping: 2652 Number of HSP's successfully gapped in prelim test: 14 Number of HSP's that attempted gapping in prelim test: 42411 Number of HSP's gapped (non-prelim): 12725 length of query: 478 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 456 effective length of database: 17,147,199,772 effective search space: 7819123096032 effective search space used: 7819123096032 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)