| Clone Name | basd27a21 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY104638.1| Zea mays PCO065152 mRNA sequence Length = 1001 Score = 385 bits (194), Expect = e-103 Identities = 355/408 (87%), Gaps = 3/408 (0%) Strand = Plus / Plus Query: 52 tcggcgaggaggtgtggctcacatgcctctcccacgccctcaccaccgagaccgaggagg 111 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 117 tcggcgaggaggtgtggctcacatgcctctcccacgccctcactaccgagaccgaggagg 176 Query: 112 tcatgggcctcctcctcggcgacgtcgagtcctccagcaggggcggctccaccgcggtga 171 ||||||| ||||||||||||||| ||||| ||||||| || || |||| || || Sbjct: 177 tcatggggctcctcctcggcgacatcgagctttccagcaaggtcg---ccacagccctgg 233 Query: 172 tatggggcgcgttgccgcagatgaggtgcgagcggaagaaggaccgcgtcgaggtcaacc 231 ||||||| |||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 234 tatggggggcgtcgccgcagatgaggtgcgagcggaagaaggaccgcgtcgagctcaacc 293 Query: 232 ccgcgctgctcgccgacgcgtccaaggaggccgagaaaatgacggccactattgggaaga 291 ||| ||| ||||||| ||| ||| | | |||||||||||||||||||| || || || Sbjct: 294 ccgagcttctcgccgccgcatccgcgcaagccgagaaaatgacggccaccatcaagagga 353 Query: 292 cgacccgggtgatcggctggtaccactcgcacccgcatatcactgtcctgccttcccatg 351 | || |||||||||| ||||||||||||||||| |||||||| || || || ||||||| Sbjct: 354 ctacgagggtgatcggatggtaccactcgcacccacatatcaccgttctaccgtcccatg 413 Query: 352 tagatgtgcgaacccaggctatgtttcagttgctagatccaggttttgttggattgatat 411 ||||||| || ||||| || |||||||||||||| ||| |||| ||||| || | |||| Sbjct: 414 tagatgttcgtacccaagcaatgtttcagttgctggatacaggctttgtgggccttatat 473 Query: 412 tttcctgttttagtgaagatgctcaaaaggttgggaaaatccaagtga 459 |||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 474 tttcttgttttagtgaagatgctcaaaaggttggaaaaatccaagtga 521
>dbj|AK101373.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033035N15, full insert sequence Length = 1783 Score = 244 bits (123), Expect = 2e-61 Identities = 195/219 (89%) Strand = Plus / Plus Query: 26 ggagatgtcgctgacggaggtcaggctcggcgaggaggtgtggctcacatgcctctccca 85 ||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||| Sbjct: 100 ggagatgtcgctgacggaggtcaggatcggggaggaggtgtggctcacctgcctctccca 159 Query: 86 cgccctcaccaccgagaccgaggaggtcatgggcctcctcctcggcgacgtcgagtcctc 145 |||||||||||||||||| ||||||||||||||||||||| |||||||| || || || Sbjct: 160 cgccctcaccaccgagacggaggaggtcatgggcctcctcttcggcgacatcaagcattc 219 Query: 146 cagcaggggcggctccaccgcggtgatatggggcgcgttgccgcagatgaggtgcgagcg 205 ||||||||||| || || |||||||||| |||| ||||||||||||||||||||| Sbjct: 220 gagcaggggcggggtgactgctctgatatggggggcgtcgccgcagatgaggtgcgagcg 279 Query: 206 gaagaaggaccgcgtcgaggtcaaccccgcgctgctcgc 244 |||||||||| | || ||||||||||||| ||||||||| Sbjct: 280 gaagaaggacagggtggaggtcaaccccgagctgctcgc 318 Score = 202 bits (102), Expect = 8e-49 Identities = 165/186 (88%) Strand = Plus / Plus Query: 298 gggtgatcggctggtaccactcgcacccgcatatcactgtcctgccttcccatgtagatg 357 ||||||| || |||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 372 gggtgattggatggtaccactcgcacccgcatatcaccgttctgccttcccatgtagatg 431 Query: 358 tgcgaacccaggctatgtttcagttgctagatccaggttttgttggattgatattttcct 417 | || |||||||| |||||||||||| | || ||||||||||| || ||||||| || | Sbjct: 432 ttcggacccaggcaatgtttcagttgatggagccaggttttgtgggtctgatattctctt 491 Query: 418 gttttagtgaagatgctcaaaaggttgggaaaatccaagtgattgccttccagtctcttg 477 ||||||| |||||||||||||||||||| ||||||||||||||||| || ||||| |||| Sbjct: 492 gttttagcgaagatgctcaaaaggttggaaaaatccaagtgattgcttttcagtcacttg 551 Query: 478 atggaa 483 ||||| Sbjct: 552 gtggaa 557
>dbj|AK060408.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-D07, full insert sequence Length = 1778 Score = 244 bits (123), Expect = 2e-61 Identities = 195/219 (89%) Strand = Plus / Plus Query: 26 ggagatgtcgctgacggaggtcaggctcggcgaggaggtgtggctcacatgcctctccca 85 ||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||| Sbjct: 96 ggagatgtcgctgacggaggtcaggatcggggaggaggtgtggctcacctgcctctccca 155 Query: 86 cgccctcaccaccgagaccgaggaggtcatgggcctcctcctcggcgacgtcgagtcctc 145 |||||||||||||||||| ||||||||||||||||||||| |||||||| || || || Sbjct: 156 cgccctcaccaccgagacggaggaggtcatgggcctcctcttcggcgacatcaagcattc 215 Query: 146 cagcaggggcggctccaccgcggtgatatggggcgcgttgccgcagatgaggtgcgagcg 205 ||||||||||| || || |||||||||| |||| ||||||||||||||||||||| Sbjct: 216 gagcaggggcggggtgactgctctgatatggggggcgtcgccgcagatgaggtgcgagcg 275 Query: 206 gaagaaggaccgcgtcgaggtcaaccccgcgctgctcgc 244 |||||||||| | || ||||||||||||| ||||||||| Sbjct: 276 gaagaaggacagggtggaggtcaaccccgagctgctcgc 314 Score = 194 bits (98), Expect = 2e-46 Identities = 164/186 (88%) Strand = Plus / Plus Query: 298 gggtgatcggctggtaccactcgcacccgcatatcactgtcctgccttcccatgtagatg 357 ||||||| || |||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 368 gggtgattggatggtaccactcgcacccgcatatcaccgttctgccttcccatgtagatg 427 Query: 358 tgcgaacccaggctatgtttcagttgctagatccaggttttgttggattgatattttcct 417 | || |||||||| |||||||||||| | || ||||||||||| || ||||||| || | Sbjct: 428 ttcggacccaggcaatgtttcagttgatggagccaggttttgtgggtctgatattctctt 487 Query: 418 gttttagtgaagatgctcaaaaggttgggaaaatccaagtgattgccttccagtctcttg 477 ||||||| ||||||||||| |||||||| ||||||||||||||||| || ||||| |||| Sbjct: 488 gttttagcgaagatgctcagaaggttggaaaaatccaagtgattgcttttcagtcacttg 547 Query: 478 atggaa 483 ||||| Sbjct: 548 gtggaa 553
>ref|XM_475822.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1137 Score = 236 bits (119), Expect = 6e-59 Identities = 191/215 (88%) Strand = Plus / Plus Query: 30 atgtcgctgacggaggtcaggctcggcgaggaggtgtggctcacatgcctctcccacgcc 89 ||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 1 atgtcgctgacggaggtcaggatcggggaggaggtgtggctcacctgcctctcccacgcc 60 Query: 90 ctcaccaccgagaccgaggaggtcatgggcctcctcctcggcgacgtcgagtcctccagc 149 |||||||||||||| ||||||||||||||||||||| |||||||| || || || ||| Sbjct: 61 ctcaccaccgagacggaggaggtcatgggcctcctcttcggcgacatcaagcattcgagc 120 Query: 150 aggggcggctccaccgcggtgatatggggcgcgttgccgcagatgaggtgcgagcggaag 209 |||||||| || || |||||||||| |||| ||||||||||||||||||||||||| Sbjct: 121 aggggcggggtgactgctctgatatggggggcgtcgccgcagatgaggtgcgagcggaag 180 Query: 210 aaggaccgcgtcgaggtcaaccccgcgctgctcgc 244 |||||| | || ||||||||||||| ||||||||| Sbjct: 181 aaggacagggtggaggtcaaccccgagctgctcgc 215 Score = 125 bits (63), Expect = 2e-25 Identities = 114/131 (87%) Strand = Plus / Plus Query: 353 agatgtgcgaacccaggctatgtttcagttgctagatccaggttttgttggattgatatt 412 |||||| || |||||||| |||||||||||| | || ||||||||||| || ||||||| Sbjct: 321 agatgttcggacccaggcaatgtttcagttgatggagccaggttttgtgggtctgatatt 380 Query: 413 ttcctgttttagtgaagatgctcaaaaggttgggaaaatccaagtgattgccttccagtc 472 || |||||||| |||||||||||||||||||| ||||||||||||||||| || ||||| Sbjct: 381 ctcttgttttagcgaagatgctcaaaaggttggaaaaatccaagtgattgcttttcagtc 440 Query: 473 tcttgatggaa 483 |||| ||||| Sbjct: 441 acttggtggaa 451
>gb|AC104713.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1362_G11, complete sequence Length = 115808 Score = 176 bits (89), Expect = 5e-41 Identities = 104/109 (95%) Strand = Plus / Plus Query: 26 ggagatgtcgctgacggaggtcaggctcggcgaggaggtgtggctcacatgcctctccca 85 ||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||| Sbjct: 104851 ggagatgtcgctgacggaggtcaggatcggggaggaggtgtggctcacctgcctctccca 104910 Query: 86 cgccctcaccaccgagaccgaggaggtcatgggcctcctcctcggcgac 134 |||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 104911 cgccctcaccaccgagacggaggaggtcatgggcctcctcttcggcgac 104959 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 169 tgatatggggcgcgttgccgcagatgaggtgcgagcggaagaaggaccgcgtcgaggtca 228 |||||||||| |||| ||||||||||||||||||||||||||||||| | || ||||||| Sbjct: 105098 tgatatggggggcgtcgccgcagatgaggtgcgagcggaagaaggacagggtggaggtca 105157 Query: 229 accccgcgctgctcgc 244 |||||| ||||||||| Sbjct: 105158 accccgagctgctcgc 105173 Score = 83.8 bits (42), Expect = 5e-13 Identities = 78/90 (86%) Strand = Plus / Plus Query: 353 agatgtgcgaacccaggctatgtttcagttgctagatccaggttttgttggattgatatt 412 |||||| || |||||||| |||||||||||| | || ||||||||||| || ||||||| Sbjct: 105934 agatgttcggacccaggcaatgtttcagttgatggagccaggttttgtgggtctgatatt 105993 Query: 413 ttcctgttttagtgaagatgctcaaaaggt 442 || |||||||| ||||||||||||||||| Sbjct: 105994 ctcttgttttagcgaagatgctcaaaaggt 106023 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 298 gggtgatcggctggtaccactcgcacccgcatatcactgtcctgccttcccatgtag 354 ||||||| || |||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 105334 gggtgattggatggtaccactcgcacccgcatatcaccgttctgccttcccatgtag 105390 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Plus Query: 439 aggttgggaaaatccaagtgattgccttccagtctcttgatggaa 483 ||||||| ||||||||||||||||| || ||||| |||| ||||| Sbjct: 106125 aggttggaaaaatccaagtgattgcttttcagtcacttggtggaa 106169
>gb|AC098833.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1288_A07, complete sequence Length = 122120 Score = 176 bits (89), Expect = 5e-41 Identities = 104/109 (95%) Strand = Plus / Plus Query: 26 ggagatgtcgctgacggaggtcaggctcggcgaggaggtgtggctcacatgcctctccca 85 ||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||| Sbjct: 5793 ggagatgtcgctgacggaggtcaggatcggggaggaggtgtggctcacctgcctctccca 5852 Query: 86 cgccctcaccaccgagaccgaggaggtcatgggcctcctcctcggcgac 134 |||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 5853 cgccctcaccaccgagacggaggaggtcatgggcctcctcttcggcgac 5901 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 169 tgatatggggcgcgttgccgcagatgaggtgcgagcggaagaaggaccgcgtcgaggtca 228 |||||||||| |||| ||||||||||||||||||||||||||||||| | || ||||||| Sbjct: 6040 tgatatggggggcgtcgccgcagatgaggtgcgagcggaagaaggacagggtggaggtca 6099 Query: 229 accccgcgctgctcgc 244 |||||| ||||||||| Sbjct: 6100 accccgagctgctcgc 6115 Score = 83.8 bits (42), Expect = 5e-13 Identities = 78/90 (86%) Strand = Plus / Plus Query: 353 agatgtgcgaacccaggctatgtttcagttgctagatccaggttttgttggattgatatt 412 |||||| || |||||||| |||||||||||| | || ||||||||||| || ||||||| Sbjct: 6876 agatgttcggacccaggcaatgtttcagttgatggagccaggttttgtgggtctgatatt 6935 Query: 413 ttcctgttttagtgaagatgctcaaaaggt 442 || |||||||| ||||||||||||||||| Sbjct: 6936 ctcttgttttagcgaagatgctcaaaaggt 6965 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 298 gggtgatcggctggtaccactcgcacccgcatatcactgtcctgccttcccatgtag 354 ||||||| || |||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 6276 gggtgattggatggtaccactcgcacccgcatatcaccgttctgccttcccatgtag 6332 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Plus Query: 439 aggttgggaaaatccaagtgattgccttccagtctcttgatggaa 483 ||||||| ||||||||||||||||| || ||||| |||| ||||| Sbjct: 7067 aggttggaaaaatccaagtgattgcttttcagtcacttggtggaa 7111
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 176 bits (89), Expect = 5e-41 Identities = 104/109 (95%) Strand = Plus / Plus Query: 26 ggagatgtcgctgacggaggtcaggctcggcgaggaggtgtggctcacatgcctctccca 85 ||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||| Sbjct: 26723854 ggagatgtcgctgacggaggtcaggatcggggaggaggtgtggctcacctgcctctccca 26723913 Query: 86 cgccctcaccaccgagaccgaggaggtcatgggcctcctcctcggcgac 134 |||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 26723914 cgccctcaccaccgagacggaggaggtcatgggcctcctcttcggcgac 26723962 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 169 tgatatggggcgcgttgccgcagatgaggtgcgagcggaagaaggaccgcgtcgaggtca 228 |||||||||| |||| ||||||||||||||||||||||||||||||| | || ||||||| Sbjct: 26724101 tgatatggggggcgtcgccgcagatgaggtgcgagcggaagaaggacagggtggaggtca 26724160 Query: 229 accccgcgctgctcgc 244 |||||| ||||||||| Sbjct: 26724161 accccgagctgctcgc 26724176 Score = 83.8 bits (42), Expect = 5e-13 Identities = 78/90 (86%) Strand = Plus / Plus Query: 353 agatgtgcgaacccaggctatgtttcagttgctagatccaggttttgttggattgatatt 412 |||||| || |||||||| |||||||||||| | || ||||||||||| || ||||||| Sbjct: 26724937 agatgttcggacccaggcaatgtttcagttgatggagccaggttttgtgggtctgatatt 26724996 Query: 413 ttcctgttttagtgaagatgctcaaaaggt 442 || |||||||| ||||||||||||||||| Sbjct: 26724997 ctcttgttttagcgaagatgctcaaaaggt 26725026 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 298 gggtgatcggctggtaccactcgcacccgcatatcactgtcctgccttcccatgtag 354 ||||||| || |||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 26724337 gggtgattggatggtaccactcgcacccgcatatcaccgttctgccttcccatgtag 26724393 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Plus Query: 439 aggttgggaaaatccaagtgattgccttccagtctcttgatggaa 483 ||||||| ||||||||||||||||| || ||||| |||| ||||| Sbjct: 26725128 aggttggaaaaatccaagtgattgcttttcagtcacttggtggaa 26725172 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 cggcggcggccggccggcgg 27 |||||||||||||||||||| Sbjct: 11164304 cggcggcggccggccggcgg 11164323
>gb|BT018208.1| Zea mays clone EL01N0560C12.c mRNA sequence Length = 1328 Score = 107 bits (54), Expect = 4e-20 Identities = 96/110 (87%) Strand = Plus / Plus Query: 363 acccaggctatgtttcagttgctagatccaggttttgttggattgatattttcctgtttt 422 ||||| || |||||||||||||| ||||| | ||||| || | |||||||| |||||| Sbjct: 6 acccaagcgatgtttcagttgctggatccttgatttgtgggccttatattttcttgtttt 65 Query: 423 agtgaagatgctcaaaaggttgggaaaatccaagtgattgccttccagtc 472 ||||||||||||||||||||||| ||||||||||||| |||||| ||||| Sbjct: 66 agtgaagatgctcaaaaggttggaaaaatccaagtgactgcctttcagtc 115
>ref|NM_111562.3| Arabidopsis thaliana unknown protein AT3G06820 mRNA, complete cds Length = 1676 Score = 101 bits (51), Expect = 2e-18 Identities = 144/175 (82%) Strand = Plus / Plus Query: 309 tggtaccactcgcacccgcatatcactgtcctgccttcccatgtagatgtgcgaacccag 368 ||||||||||| || || ||||| || || || ||||||||||| ||||| || || || Sbjct: 577 tggtaccactcccatcctcatattaccgttcttccttcccatgtcgatgttcggacacaa 636 Query: 369 gctatgtttcagttgctagatccaggttttgttggattgatattttcctgttttagtgaa 428 ||||||| |||| | ||||| | |||||| |||| | ||||||||||||||||||||| Sbjct: 637 gctatgtatcagcttttagattctggttttattggcctcatattttcctgttttagtgaa 696 Query: 429 gatgctcaaaaggttgggaaaatccaagtgattgccttccagtctcttgatggaa 483 |||||| | |||||||| | ||||||||| || || ||||||||| |||||||| Sbjct: 697 gatgctaacaaggttggtagaatccaagttatcgctttccagtcttctgatggaa 751 Score = 48.1 bits (24), Expect = 0.028 Identities = 42/48 (87%) Strand = Plus / Plus Query: 94 ccaccgagaccgaggaggtcatgggcctcctcctcggcgacgtcgagt 141 ||||||||||||| || ||||||| ||||| ||||||||| |||||| Sbjct: 227 ccaccgagaccgaagaaatcatgggtctccttctcggcgacatcgagt 274
>gb|AY093768.1| Arabidopsis thaliana At1g80210/F18B13_28 mRNA, complete cds Length = 1573 Score = 101 bits (51), Expect = 2e-18 Identities = 144/175 (82%) Strand = Plus / Plus Query: 309 tggtaccactcgcacccgcatatcactgtcctgccttcccatgtagatgtgcgaacccag 368 ||||||||||| || || ||||| || || || ||||||||||| ||||| ||||| || Sbjct: 387 tggtaccactcccatcctcatattaccgttcttccttcccatgtcgatgttcgaacacaa 446 Query: 369 gctatgtttcagttgctagatccaggttttgttggattgatattttcctgttttagtgaa 428 ||||||| |||| | ||||| | |||||| |||| | || |||||||||||||||||| Sbjct: 447 gctatgtatcagcttttagattctggttttattggcctcatcttttcctgttttagtgaa 506 Query: 429 gatgctcaaaaggttgggaaaatccaagtgattgccttccagtctcttgatggaa 483 |||||| | |||||||| | ||||||||| || || ||||||||| |||||||| Sbjct: 507 gatgctaacaaggttggcagaatccaagttatcgctttccagtcttctgatggaa 561 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 94 ccaccgagaccgaggaggtcatgggcctcctcctcggcgacgtcgagt 141 ||||||||||||| ||| ||||||| ||||| ||||||||| |||||| Sbjct: 169 ccaccgagaccgaagagatcatgggtctccttctcggcgacatcgagt 216
>emb|BX813754.1|CNS0AEJ5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB38ZD07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1374 Score = 101 bits (51), Expect = 2e-18 Identities = 144/175 (82%) Strand = Plus / Plus Query: 309 tggtaccactcgcacccgcatatcactgtcctgccttcccatgtagatgtgcgaacccag 368 ||||||||||| || || ||||| || || || ||||||||||| ||||| ||||| || Sbjct: 367 tggtaccactcccatcctcatattaccgttcttccttcccatgtcgatgttcgaacacaa 426 Query: 369 gctatgtttcagttgctagatccaggttttgttggattgatattttcctgttttagtgaa 428 ||||||| |||| | ||||| | |||||| |||| | || |||||||||||||||||| Sbjct: 427 gctatgtatcagcttttagattctggttttattggcctcatcttttcctgttttagtgaa 486 Query: 429 gatgctcaaaaggttgggaaaatccaagtgattgccttccagtctcttgatggaa 483 |||||| | |||||||| | ||||||||| || || ||||||||| |||||||| Sbjct: 487 gatgctaacaaggttggcagaatccaagttatcgctttccagtcttctgatggaa 541 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 94 ccaccgagaccgaggaggtcatgggcctcctcctcggcgacgtcgagt 141 ||||||||||||| ||| ||||||| ||||| ||||||||| |||||| Sbjct: 149 ccaccgagaccgaagagatcatgggtctccttctcggcgacatcgagt 196
>emb|BX823110.1|CNS0A7SR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB90ZD12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1214 Score = 101 bits (51), Expect = 2e-18 Identities = 144/175 (82%) Strand = Plus / Plus Query: 309 tggtaccactcgcacccgcatatcactgtcctgccttcccatgtagatgtgcgaacccag 368 ||||||||||| || || ||||| || || || ||||||||||| ||||| || || || Sbjct: 363 tggtaccactcccatcctcatattaccgttcttccttcccatgtcgatgttcggacacaa 422 Query: 369 gctatgtttcagttgctagatccaggttttgttggattgatattttcctgttttagtgaa 428 ||||||| |||| | ||||| | |||||| |||| | ||||||||||||||||||||| Sbjct: 423 gctatgtatcagcttttagattctggttttattggcctcatattttcctgttttagtgaa 482 Query: 429 gatgctcaaaaggttgggaaaatccaagtgattgccttccagtctcttgatggaa 483 |||||| | |||||||| | ||||||||| || || ||||||||| |||||||| Sbjct: 483 gatgctaacaaggttggtagaatccaagttatcgctttccagtcttctgatggaa 537
>emb|BX822877.1|CNS0A4Y1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB6ZD05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1680 Score = 101 bits (51), Expect = 2e-18 Identities = 144/175 (82%) Strand = Plus / Plus Query: 309 tggtaccactcgcacccgcatatcactgtcctgccttcccatgtagatgtgcgaacccag 368 ||||||||||| || || ||||| || || || ||||||||||| ||||| || || || Sbjct: 583 tggtaccactcccatcctcatattaccgttcttccttcccatgtcgatgttcggacacaa 642 Query: 369 gctatgtttcagttgctagatccaggttttgttggattgatattttcctgttttagtgaa 428 ||||||| |||| | ||||| | |||||| |||| | ||||||||||||||||||||| Sbjct: 643 gctatgtatcagcttttagattctggttttattggcctcatattttcctgttttagtgaa 702 Query: 429 gatgctcaaaaggttgggaaaatccaagtgattgccttccagtctcttgatggaa 483 |||||| | |||||||| | ||||||||| || || ||||||||| |||||||| Sbjct: 703 gatgctaacaaggttggtagaatccaagttatcgctttccagtcttctgatggaa 757 Score = 48.1 bits (24), Expect = 0.028 Identities = 42/48 (87%) Strand = Plus / Plus Query: 94 ccaccgagaccgaggaggtcatgggcctcctcctcggcgacgtcgagt 141 ||||||||||||| || ||||||| ||||| ||||||||| |||||| Sbjct: 233 ccaccgagaccgaagaaatcatgggtctccttctcggcgacatcgagt 280
>gb|BT002265.1| Arabidopsis thaliana At1g80210/F18B13_28 mRNA, complete cds Length = 1221 Score = 101 bits (51), Expect = 2e-18 Identities = 144/175 (82%) Strand = Plus / Plus Query: 309 tggtaccactcgcacccgcatatcactgtcctgccttcccatgtagatgtgcgaacccag 368 ||||||||||| || || ||||| || || || ||||||||||| ||||| ||||| || Sbjct: 283 tggtaccactcccatcctcatattaccgttcttccttcccatgtcgatgttcgaacacaa 342 Query: 369 gctatgtttcagttgctagatccaggttttgttggattgatattttcctgttttagtgaa 428 ||||||| |||| | ||||| | |||||| |||| | || |||||||||||||||||| Sbjct: 343 gctatgtatcagcttttagattctggttttattggcctcatcttttcctgttttagtgaa 402 Query: 429 gatgctcaaaaggttgggaaaatccaagtgattgccttccagtctcttgatggaa 483 |||||| | |||||||| | ||||||||| || || ||||||||| |||||||| Sbjct: 403 gatgctaacaaggttggcagaatccaagttatcgctttccagtcttctgatggaa 457 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 94 ccaccgagaccgaggaggtcatgggcctcctcctcggcgacgtcgagt 141 ||||||||||||| ||| ||||||| ||||| ||||||||| |||||| Sbjct: 65 ccaccgagaccgaagagatcatgggtctccttctcggcgacatcgagt 112
>emb|BX823717.1|CNS0A7QO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS6ZB10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1526 Score = 95.6 bits (48), Expect = 1e-16 Identities = 145/176 (82%), Gaps = 1/176 (0%) Strand = Plus / Plus Query: 309 tggtaccactcgcacccgcatatcactgtcctgccttcccatgtagatgtgcgaacccag 368 ||||||||||| || || ||||| || || || ||||||||||| ||||| || || || Sbjct: 431 tggtaccactcccatcctcatattaccgttcttccttcccatgtcgatgttcggacacaa 490 Query: 369 gctatgtttcagttgctagatccaggttttgttggattgatattttcctgttttagtgaa 428 ||||||| |||| | ||||| | |||||| |||| | ||||||||||||||||||||| Sbjct: 491 gctatgtatcagcttttagattctggttttattggcctcatattttcctgttttagtgaa 550 Query: 429 gatgctca-aaaggttgggaaaatccaagtgattgccttccagtctcttgatggaa 483 |||||| | ||||||||| | ||||||||| || || ||||||||| |||||||| Sbjct: 551 gatgctaacaaaggttggtagaatccaagttatcgctttccagtcttctgatggaa 606 Score = 48.1 bits (24), Expect = 0.028 Identities = 42/48 (87%) Strand = Plus / Plus Query: 94 ccaccgagaccgaggaggtcatgggcctcctcctcggcgacgtcgagt 141 ||||||||||||| || ||||||| ||||| ||||||||| |||||| Sbjct: 213 ccaccgagaccgaagaaatcatgggtctccttctcggcgacatcgagt 260
>gb|AY149940.1| Arabidopsis thaliana At3g06820/F3E22_4 mRNA, complete cds Length = 1218 Score = 93.7 bits (47), Expect = 5e-16 Identities = 143/175 (81%) Strand = Plus / Plus Query: 309 tggtaccactcgcacccgcatatcactgtcctgccttcccatgtagatgtgcgaacccag 368 ||||||||||| || || ||||| || || || ||||||||||| ||||| || || || Sbjct: 283 tggtaccactcccatcctcatattaccgttcttccttcccatgtcgatgttcggacacaa 342 Query: 369 gctatgtttcagttgctagatccaggttttgttggattgatattttcctgttttagtgaa 428 ||||||| |||| | ||||| | |||||| |||| | |||| |||||||||||||||| Sbjct: 343 gctatgtatcagcttttagattctggttttattggcctcatatattcctgttttagtgaa 402 Query: 429 gatgctcaaaaggttgggaaaatccaagtgattgccttccagtctcttgatggaa 483 |||||| | |||||||| | ||||||||| || || ||||||||| |||||||| Sbjct: 403 gatgctaacaaggttggtagaatccaagttatcgctttccagtcttctgatggaa 457 Score = 48.1 bits (24), Expect = 0.028 Identities = 42/48 (87%) Strand = Plus / Plus Query: 94 ccaccgagaccgaggaggtcatgggcctcctcctcggcgacgtcgagt 141 ||||||||||||| || ||||||| ||||| ||||||||| |||||| Sbjct: 65 ccaccgagaccgaagaaatcatgggtctccttctcggcgacatcgagt 112
>gb|AY075635.1| Arabidopsis thaliana AT3g06820/F3E22_4 mRNA, complete cds Length = 1534 Score = 93.7 bits (47), Expect = 5e-16 Identities = 143/175 (81%) Strand = Plus / Plus Query: 309 tggtaccactcgcacccgcatatcactgtcctgccttcccatgtagatgtgcgaacccag 368 ||||||||||| || || ||||| || || || ||||||||||| ||||| || || || Sbjct: 459 tggtaccactcccatcctcatattaccgttcttccttcccatgtcgatgttcggacacaa 518 Query: 369 gctatgtttcagttgctagatccaggttttgttggattgatattttcctgttttagtgaa 428 ||||||| |||| | ||||| | |||||| |||| | |||| |||||||||||||||| Sbjct: 519 gctatgtatcagcttttagattctggttttattggcctcatatattcctgttttagtgaa 578 Query: 429 gatgctcaaaaggttgggaaaatccaagtgattgccttccagtctcttgatggaa 483 |||||| | |||||||| | ||||||||| || || ||||||||| |||||||| Sbjct: 579 gatgctaacaaggttggtagaatccaagttatcgctttccagtcttctgatggaa 633 Score = 48.1 bits (24), Expect = 0.028 Identities = 42/48 (87%) Strand = Plus / Plus Query: 94 ccaccgagaccgaggaggtcatgggcctcctcctcggcgacgtcgagt 141 ||||||||||||| || ||||||| ||||| ||||||||| |||||| Sbjct: 241 ccaccgagaccgaagaaatcatgggtctccttctcggcgacatcgagt 288
>emb|BX815759.1|CNS0AEG9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS91ZB08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1505 Score = 93.7 bits (47), Expect = 5e-16 Identities = 143/175 (81%) Strand = Plus / Plus Query: 309 tggtaccactcgcacccgcatatcactgtcctgccttcccatgtagatgtgcgaacccag 368 ||||||||||| || || ||||| || || || ||||||||||| ||||| ||||| || Sbjct: 386 tggtaccactcccatcctcatattaccgttcttccttcccatgtcgatgttcgaacacaa 445 Query: 369 gctatgtttcagttgctagatccaggttttgttggattgatattttcctgttttagtgaa 428 ||||||| |||| | ||||| | |||||| |||| | || |||||||||||||||||| Sbjct: 446 gctatgtatcagcttttagattctggttttattggcctcatcttttcctgttttagtgaa 505 Query: 429 gatgctcaaaaggttgggaaaatccaagtgattgccttccagtctcttgatggaa 483 |||||| | ||||||| | ||||||||| || || ||||||||| |||||||| Sbjct: 506 gatgctaacgaggttggcagaatccaagttatcgctttccagtcttctgatggaa 560 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 94 ccaccgagaccgaggaggtcatgggcctcctcctcggcgacgtcgagt 141 ||||||||||||| ||| ||||||| ||||| ||||||||| |||||| Sbjct: 168 ccaccgagaccgaagagatcatgggtctccttctcggcgacatcgagt 215
>ref|NM_106670.1| Arabidopsis thaliana unknown protein AT1G80210 mRNA, complete cds Length = 1065 Score = 75.8 bits (38), Expect = 1e-10 Identities = 141/175 (80%), Gaps = 4/175 (2%) Strand = Plus / Plus Query: 309 tggtaccactcgcacccgcatatcactgtcctgccttcccatgtagatgtgcgaacccag 368 ||||||||||| || || ||||| || || || ||||||||| |||| ||||| || Sbjct: 212 tggtaccactcccatcctcatattaccgttcttccttcccat----atgttcgaacacaa 267 Query: 369 gctatgtttcagttgctagatccaggttttgttggattgatattttcctgttttagtgaa 428 ||||||| |||| | ||||| | |||||| |||| | || |||||||||||||||||| Sbjct: 268 gctatgtatcagcttttagattctggttttattggcctcatcttttcctgttttagtgaa 327 Query: 429 gatgctcaaaaggttgggaaaatccaagtgattgccttccagtctcttgatggaa 483 |||||| | |||||||| | ||||||||| || || ||||||||| |||||||| Sbjct: 328 gatgctaacaaggttggcagaatccaagttatcgctttccagtcttctgatggaa 382 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 94 ccaccgagaccgaggaggtcatgggcctcctcctcggcgacgtcgagt 141 ||||||||||||| ||| ||||||| ||||| ||||||||| |||||| Sbjct: 44 ccaccgagaccgaagagatcatgggtctccttctcggcgacatcgagt 91
>gb|BT012872.1| Lycopersicon esculentum clone 113971R, mRNA sequence Length = 1830 Score = 73.8 bits (37), Expect = 5e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 300 gtgatcggctggtaccactcgcacccgcatatcactgtcctgccttcccatgtagatgtg 359 ||||| ||||||||||| || || || || || || || || ||||||||||| ||||| Sbjct: 477 gtgattggctggtaccattcacatccccacattacagtgctcccttcccatgttgatgtc 536 Query: 360 cgaacccaggctatgtttcagttgctagatccaggttttgttggattgatattttcctgt 419 || || || || |||| ||| | || ||| | || ||| |||| ||||||||||| ||| Sbjct: 537 cgcactcaagccatgtatcaacttctggatgctgggtttattgggttgatattttcatgt 596 Query: 420 tttagtgaagatgctcaaaaggttgggaaaatccaagtgattgccttccagtc 472 |||||||||||||| || ||||| |||| ||||||||| ||||| || ||||| Sbjct: 597 tttagtgaagatgcacagaaggtcgggagaatccaagttattgcatttcagtc 649
>gb|AC023912.5|ATAC023912 Arabidopsis thaliana chromosome III BAC F3E22 genomic sequence, complete sequence Length = 63767 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 408 atattttcctgttttagtgaagatgctcaaaaggttgg 445 ||||||||||||||||||||||||||| | |||||||| Sbjct: 13989 atattttcctgttttagtgaagatgctaacaaggttgg 14026 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Plus Query: 94 ccaccgagaccgaggaggtcatgggcctcctcctcggcgacgtcgag 140 ||||||||||||| || ||||||| ||||| ||||||||| ||||| Sbjct: 13238 ccaccgagaccgaagaaatcatgggtctccttctcggcgacatcgag 13284
>gb|BC082208.1| Xenopus laevis MGC99130 protein, mRNA (cDNA clone MGC:99130 IMAGE:7205758), complete cds Length = 902 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 309 tggtaccactcgcacccgcatatcactgtcctgccttcccatgtagatgtgcgaacccag 368 ||||| ||||| ||||| || |||||||| |||||||||||| |||||||| || ||| Sbjct: 302 tggtatcactcccaccctcacatcactgtatggccttcccatgtggatgtgcgcactcag 361 Query: 369 gctatgt 375 ||||||| Sbjct: 362 gctatgt 368
>gb|AC009322.1|AC009322 Arabidopsis thaliana chromosome I BAC F18B13 genomic sequence, complete sequence Length = 116905 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 94 ccaccgagaccgaggaggtcatgggcctcctcctcggcgacgtcgag 140 ||||||||||||| ||| ||||||| ||||| ||||||||| ||||| Sbjct: 102327 ccaccgagaccgaagagatcatgggtctccttctcggcgacatcgag 102281 Score = 54.0 bits (27), Expect = 5e-04 Identities = 75/91 (82%) Strand = Plus / Minus Query: 353 agatgtgcgaacccaggctatgtttcagttgctagatccaggttttgttggattgatatt 412 |||||| ||||| || ||||||| |||| | ||||| | |||||| |||| | || || Sbjct: 101626 agatgttcgaacacaagctatgtatcagcttttagattctggttttattggcctcatctt 101567 Query: 413 ttcctgttttagtgaagatgctcaaaaggtt 443 |||||||||||||||||||||| | |||||| Sbjct: 101566 ttcctgttttagtgaagatgctaacaaggtt 101536
>emb|BX816871.1|CNS0AEGQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH73ZB03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1496 Score = 48.1 bits (24), Expect = 0.028 Identities = 60/72 (83%) Strand = Plus / Plus Query: 412 tttcctgttttagtgaagatgctcaaaaggttgggaaaatccaagtgattgccttccagt 471 |||||||||||||| ||||||| | ||||||| | | |||||||||| || ||||||| Sbjct: 491 tttcctgttttagttaagatgcgaaggaggttggcagagtccaagtgatcgctttccagt 550 Query: 472 ctcttgatggaa 483 || |||||||| Sbjct: 551 cttatgatggaa 562 Score = 48.1 bits (24), Expect = 0.028 Identities = 42/48 (87%) Strand = Plus / Plus Query: 94 ccaccgagaccgaggaggtcatgggcctcctcctcggcgacgtcgagt 141 ||||||||||||| ||| ||||||| | ||| ||||||||| |||||| Sbjct: 170 ccaccgagaccgaagagatcatgggtcgccttctcggcgacatcgagt 217
>ref|XM_967407.1| PREDICTED: Tribolium castaneum similar to C6.1A protein (LOC661232), mRNA Length = 880 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Plus Query: 84 cacgccctcaccaccgagaccgaggaggtcatgggcctcctcctcgg 130 |||||||| |||||||| | |||||||||||||| |||||| |||| Sbjct: 152 cacgccctaaccaccgaaaaagaggaggtcatgggtctcctcatcgg 198
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 229 accccgcgctgctcgccgacgcg 251 ||||||||||||||||||||||| Sbjct: 4817848 accccgcgctgctcgccgacgcg 4817826 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 ccgcgctgctcgccgacgcg 251 |||||||||||||||||||| Sbjct: 1368551 ccgcgctgctcgccgacgcg 1368570
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 223 aggtcaaccccgcgctgctcgccga 247 |||||||| |||||||||||||||| Sbjct: 1211292 aggtcaacgccgcgctgctcgccga 1211316
>emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete genome; segment 16/29 Length = 299050 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 226 tcaaccccgcgctgctcgccg 246 ||||||||||||||||||||| Sbjct: 15799 tcaaccccgcgctgctcgccg 15819
>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII, complete sequence Length = 1476513 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 306 ggctggtaccactcgcacccg 326 ||||||||||||||||||||| Sbjct: 730549 ggctggtaccactcgcacccg 730569
>gb|AF263912.1|AF263912 Streptomyces noursei ATCC 11455 nystatin biosynthetic gene cluster, complete sequence Length = 123580 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 gcgctgctcgccgacgcgtcc 254 ||||||||||||||||||||| Sbjct: 117408 gcgctgctcgccgacgcgtcc 117428
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 117 ggcctcctcctcggcgacgtc 137 ||||||||||||||||||||| Sbjct: 5268020 ggcctcctcctcggcgacgtc 5268040 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 gaagaaggaccgcgtcgagg 225 |||||||||||||||||||| Sbjct: 8267011 gaagaaggaccgcgtcgagg 8267030
>ref|NM_211733.1| Eremothecium gossypii AGR006Wp (AGR006W), mRNA Length = 936 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 306 ggctggtaccactcgcacccg 326 ||||||||||||||||||||| Sbjct: 331 ggctggtaccactcgcacccg 351
>gb|BT020460.1| Arabidopsis thaliana At1g51190 mRNA, complete cds Length = 1707 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 tgaagatgctcaaaaggttg 444 |||||||||||||||||||| Sbjct: 1295 tgaagatgctcaaaaggttg 1276
>ref|NM_103997.2| Arabidopsis thaliana PLT2 (PLETHORA 2); transcription factor AT1G51190 (PLT2) mRNA, complete cds Length = 2134 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 tgaagatgctcaaaaggttg 444 |||||||||||||||||||| Sbjct: 1409 tgaagatgctcaaaaggttg 1390
>gb|AC124664.14| Mus musculus chromosome 1, clone RP23-103B18, complete sequence Length = 220456 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 gaggaggtgtggctcacatg 76 |||||||||||||||||||| Sbjct: 34529 gaggaggtgtggctcacatg 34548
>gb|BT020277.1| Arabidopsis thaliana At1g51190 mRNA, complete cds Length = 2060 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 tgaagatgctcaaaaggttg 444 |||||||||||||||||||| Sbjct: 1397 tgaagatgctcaaaaggttg 1378
>gb|AE010431.1| Methanopyrus kandleri AV19 section 130 of 157 of the complete genome Length = 10503 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 gaccgcgtcgaggtcaaccc 232 |||||||||||||||||||| Sbjct: 5496 gaccgcgtcgaggtcaaccc 5515
>gb|AC115896.9| Mus musculus chromosome 1, clone RP24-443M8, complete sequence Length = 203303 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 gaggaggtgtggctcacatg 76 |||||||||||||||||||| Sbjct: 35392 gaggaggtgtggctcacatg 35373
>gb|AY506550.1| Arabidopsis thaliana PLETHORA2 (PLT2) mRNA, complete cds Length = 1873 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 tgaagatgctcaaaaggttg 444 |||||||||||||||||||| Sbjct: 1365 tgaagatgctcaaaaggttg 1346
>gb|AC132404.5| Mus musculus BAC clone RP23-328O21 from chromosome 17, complete sequence Length = 207685 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 gaggaggtgtggctcacatg 76 |||||||||||||||||||| Sbjct: 159532 gaggaggtgtggctcacatg 159551
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ccgcgctgctcgccgacgcg 251 |||||||||||||||||||| Sbjct: 656513 ccgcgctgctcgccgacgcg 656494
>gb|AY534910.1| Uncultured marine group II euryarchaeote DeepAnt-JyKC7 clone cosmid DeepAnt-JyKC7, complete sequence Length = 39502 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 ctcctcctcggcgacgtcga 139 |||||||||||||||||||| Sbjct: 5661 ctcctcctcggcgacgtcga 5680
>gb|AC137610.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0018H09, complete sequence Length = 155329 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 cggcggcggccggccggcgg 27 |||||||||||||||||||| Sbjct: 66558 cggcggcggccggccggcgg 66577
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 ccccgcgctgctcgccgacg 249 |||||||||||||||||||| Sbjct: 2486940 ccccgcgctgctcgccgacg 2486921
>gb|AY024351.1| Oryza sativa (japonica cultivar-group) phytoene synthase gene, complete cds Length = 3222 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 gggcctcctcctcggcgacg 135 |||||||||||||||||||| Sbjct: 508 gggcctcctcctcggcgacg 527
>gb|AY452768.1| Oryza sativa (japonica cultivar-group) phytoene synthase 2 mRNA, partial cds Length = 1176 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 gggcctcctcctcggcgacg 135 |||||||||||||||||||| Sbjct: 40 gggcctcctcctcggcgacg 59
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 cgcgctgctcgccgacgcgt 252 |||||||||||||||||||| Sbjct: 725950 cgcgctgctcgccgacgcgt 725969
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 ccgcgctgctcgccgacgcg 251 |||||||||||||||||||| Sbjct: 3118562 ccgcgctgctcgccgacgcg 3118581
>gb|AY585681.1| Arabidopsis thaliana clone at1g51190 AP2/EREBP transcription factor mRNA, complete cds Length = 1707 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 tgaagatgctcaaaaggttg 444 |||||||||||||||||||| Sbjct: 1295 tgaagatgctcaaaaggttg 1276
>gb|AF160511.1| Yarrowia lipolytica integral peroxisomal membrane protein (PEX23) gene, complete cds Length = 1677 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 tcaccaccgagaccgaggag 110 |||||||||||||||||||| Sbjct: 1367 tcaccaccgagaccgaggag 1386
>emb|CT009683.6| Pig DNA sequence from clone PigE-81M6 on chromosome 7, complete sequence Length = 134846 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 384 ctagatccaggttttgttgg 403 |||||||||||||||||||| Sbjct: 62509 ctagatccaggttttgttgg 62528
>ref|XM_503356.1| Yarrowia lipolytica CLIB122, YALI0D27302g predicted mRNA Length = 1251 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 tcaccaccgagaccgaggag 110 |||||||||||||||||||| Sbjct: 1187 tcaccaccgagaccgaggag 1206
>gb|AC120496.2| Genomic sequence for Sorghum bicolor, clone SBBBc0267M07, complete sequence Length = 120132 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 cggcggcggccggccggcgg 27 |||||||||||||||||||| Sbjct: 26098 cggcggcggccggccggcgg 26117
>gb|AC118541.12| Mus musculus strain 129/SvJ chromosome 17 clone mgs1-205i23, complete sequence Length = 179569 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 gaggaggtgtggctcacatg 76 |||||||||||||||||||| Sbjct: 115915 gaggaggtgtggctcacatg 115896
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 cgcgctgctcgccgacgcgt 252 |||||||||||||||||||| Sbjct: 2046336 cgcgctgctcgccgacgcgt 2046355
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 ccgcgctgctcgccgacgcg 251 |||||||||||||||||||| Sbjct: 2848643 ccgcgctgctcgccgacgcg 2848662
>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29 Length = 276800 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 ctcctcctcggcgacgtcga 139 |||||||||||||||||||| Sbjct: 235320 ctcctcctcggcgacgtcga 235301
>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29 Length = 277000 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 cccgcgctgctcgccgacgc 250 |||||||||||||||||||| Sbjct: 155638 cccgcgctgctcgccgacgc 155619
>ref|NM_013138.1| Rattus norvegicus inositol 1,4,5-triphosphate receptor 3 (Itpr3), mRNA Length = 8806 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 gaggaggtgtggctcacatg 76 |||||||||||||||||||| Sbjct: 2202 gaggaggtgtggctcacatg 2221
>ref|NM_080553.2| Mus musculus inositol 1,4,5-triphosphate receptor 3 (Itpr3), mRNA Length = 8773 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 gaggaggtgtggctcacatg 76 |||||||||||||||||||| Sbjct: 2118 gaggaggtgtggctcacatg 2137
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 ctcaccaccgagaccgagga 109 |||||||||||||||||||| Sbjct: 1949373 ctcaccaccgagaccgagga 1949354
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 ccgaacggcggcggccggccggcg 26 |||||||| ||||||||||||||| Sbjct: 2188089 ccgaacgggggcggccggccggcg 2188112
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 gaagaaggaccgcgtcgagg 225 |||||||||||||||||||| Sbjct: 2051429 gaagaaggaccgcgtcgagg 2051410
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 cgcgctgctcgccgacgcgt 252 |||||||||||||||||||| Sbjct: 757151 cgcgctgctcgccgacgcgt 757132
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 gggcctcctcctcggcgacg 135 |||||||||||||||||||| Sbjct: 26816759 gggcctcctcctcggcgacg 26816740
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 caaccccgcgctgctcgccg 246 |||||||||||||||||||| Sbjct: 20984268 caaccccgcgctgctcgccg 20984287
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 cggcggcggccggccggcgg 27 |||||||||||||||||||| Sbjct: 27139851 cggcggcggccggccggcgg 27139832 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 cggcggcggccggccggcgg 27 |||||||||||||||||||| Sbjct: 7851291 cggcggcggccggccggcgg 7851310 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 acggcggcggccggccggcg 26 |||||||||||||||||||| Sbjct: 2098640 acggcggcggccggccggcg 2098621
>emb|BX816446.1|CNS0AE2W Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH49ZD12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2092 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 tgaagatgctcaaaaggttg 444 |||||||||||||||||||| Sbjct: 1413 tgaagatgctcaaaaggttg 1394
>dbj|AB182289.1| Mus musculus itpr3 mRNA for type-3 inositol 1,4,5-trisphosphate receptor, complete cds Length = 8773 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 gaggaggtgtggctcacatg 76 |||||||||||||||||||| Sbjct: 2118 gaggaggtgtggctcacatg 2137
>gb|AC138710.5| Homo sapiens chromosome 17, clone RP11-822E23, complete sequence Length = 147089 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 ggctcacatgcctctcccac 86 |||||||||||||||||||| Sbjct: 125392 ggctcacatgcctctcccac 125373
>gb|AC159186.4| Mus musculus BAC clone RP24-281N15 from chromosome 12, complete sequence Length = 180125 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 ggtgtggctcacatgcctct 81 |||||||||||||||||||| Sbjct: 126273 ggtgtggctcacatgcctct 126292
>dbj|AP003708.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0041F13 Length = 163230 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 acggcggcggccggccggcg 26 |||||||||||||||||||| Sbjct: 119502 acggcggcggccggccggcg 119483
>dbj|AP005107.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0431E05 Length = 146091 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 cggcggcggccggccggcgg 27 |||||||||||||||||||| Sbjct: 65673 cggcggcggccggccggcgg 65692
>dbj|AP003628.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0473H04 Length = 155204 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 cggcggcggccggccggcgg 27 |||||||||||||||||||| Sbjct: 108661 cggcggcggccggccggcgg 108642
>dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1274F11 Length = 171257 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 caaccccgcgctgctcgccg 246 |||||||||||||||||||| Sbjct: 76357 caaccccgcgctgctcgccg 76376
>dbj|AK073290.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025L21, full insert sequence Length = 1486 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 gggcctcctcctcggcgacg 135 |||||||||||||||||||| Sbjct: 377 gggcctcctcctcggcgacg 396
>dbj|AB109206.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone: P0478E02 Length = 140715 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 caaccccgcgctgctcgccg 246 |||||||||||||||||||| Sbjct: 5568 caaccccgcgctgctcgccg 5587
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 cgcgctgctcgccgacgcgt 252 |||||||||||||||||||| Sbjct: 1015820 cgcgctgctcgccgacgcgt 1015801
>emb|AJ532423.1|ECL532423 Euglena clara partial 18S rRNA gene, strain SAG 25.98 Length = 3314 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 cggcggcggccggccggcgg 27 |||||||||||||||||||| Sbjct: 1338 cggcggcggccggccggcgg 1319
>emb|AL929172.6| Zebrafish DNA sequence from clone DKEYP-46C10 in linkage group 25, complete sequence Length = 182666 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 399 gttggattgatattttcctgtttt 422 ||||||||||||||| |||||||| Sbjct: 42207 gttggattgatatttgcctgtttt 42230
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 gggcctcctcctcggcgacg 135 |||||||||||||||||||| Sbjct: 26744929 gggcctcctcctcggcgacg 26744910
>emb|AL831803.4|CNS08CAG Oryza sativa chromosome 12, . BAC OSJNBb0016P08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 142370 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 gggcctcctcctcggcgacg 135 |||||||||||||||||||| Sbjct: 20726 gggcctcctcctcggcgacg 20707
>emb|CT009503.7| Pig DNA sequence from clone CH242-137E23 on chromosome 7, complete sequence Length = 222099 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 384 ctagatccaggttttgttgg 403 |||||||||||||||||||| Sbjct: 26911 ctagatccaggttttgttgg 26892
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tcaccaccgagaccgaggag 110 |||||||||||||||||||| Sbjct: 3628316 tcaccaccgagaccgaggag 3628297
>gb|AC166113.3| Mus musculus BAC clone RP23-23E6 from chromosome 14, complete sequence Length = 252394 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 gtctcttgatggaacacata 489 |||||||||||||||||||| Sbjct: 68856 gtctcttgatggaacacata 68837
>gb|L06096.1|RATIP3R3X Rat inositol trisphosphate receptor subtype 3 (IP3R-3) mRNA, complete cds Length = 8806 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 gaggaggtgtggctcacatg 76 |||||||||||||||||||| Sbjct: 2202 gaggaggtgtggctcacatg 2221
>gb|AC006085.1| Arabidopsis thaliana chromosome I BAC F11M15 genomic sequence, complete sequence Length = 105807 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 tgaagatgctcaaaaggttg 444 |||||||||||||||||||| Sbjct: 32484 tgaagatgctcaaaaggttg 32465 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,966,829 Number of Sequences: 3902068 Number of extensions: 3966829 Number of successful extensions: 91414 Number of sequences better than 10.0: 87 Number of HSP's better than 10.0 without gapping: 90 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 88821 Number of HSP's gapped (non-prelim): 2590 length of query: 507 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 485 effective length of database: 17,147,199,772 effective search space: 8316391889420 effective search space used: 8316391889420 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)