ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd26l20 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK073979.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033077H09, full insert sequence Length = 679 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 238 gcgcatcgcagagtgcatcgtcggcgacgacaccggggtcgtcgtattcacagcacgcaa 297 ||||||||| |||||| ||||||||||||| ||||||||| |||| ||||| || ||||| Sbjct: 276 gcgcatcgccgagtgcctcgtcggcgacgagaccggggtcatcgtcttcaccgcccgcaa 335 Query: 298 cgagcaagtgga 309 |||||||||||| Sbjct: 336 cgagcaagtgga 347 Score = 42.1 bits (21), Expect = 2.2 Identities = 42/49 (85%) Strand = Plus / Plus Query: 115 gttcgacaaggtggaggagctccggccgggcacctacggccacaacctc 163 ||||| ||||||||| ||||| ||||||||||| |||||||| |||| Sbjct: 144 gttcgtcaaggtggaccagctcaagccgggcacctgcggccacaccctc 192
>gb|AC119290.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0037H06, complete sequence Length = 144457 Score = 79.8 bits (40), Expect = 1e-11 Identities = 61/68 (89%) Strand = Plus / Minus Query: 238 gcgcatcgcagagtgcatcgtcggcgacgacaccggggtcgtcgtattcacagcacgcaa 297 ||||||||| |||||| ||||||||||||| ||||||||| |||| ||||| || ||||| Sbjct: 14344 gcgcatcgccgagtgcctcgtcggcgacgagaccggggtcatcgtcttcaccgcccgcaa 14285 Query: 298 cgagcaag 305 |||||||| Sbjct: 14284 cgagcaag 14277 Score = 42.1 bits (21), Expect = 2.2 Identities = 42/49 (85%) Strand = Plus / Minus Query: 115 gttcgacaaggtggaggagctccggccgggcacctacggccacaacctc 163 ||||| ||||||||| ||||| ||||||||||| |||||||| |||| Sbjct: 14476 gttcgtcaaggtggaccagctcaagccgggcacctgcggccacaccctc 14428
>gb|AC137624.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0680F01, complete sequence Length = 156691 Score = 79.8 bits (40), Expect = 1e-11 Identities = 61/68 (89%) Strand = Plus / Minus Query: 238 gcgcatcgcagagtgcatcgtcggcgacgacaccggggtcgtcgtattcacagcacgcaa 297 ||||||||| |||||| ||||||||||||| ||||||||| |||| ||||| || ||||| Sbjct: 90325 gcgcatcgccgagtgcctcgtcggcgacgagaccggggtcatcgtcttcaccgcccgcaa 90266 Query: 298 cgagcaag 305 |||||||| Sbjct: 90265 cgagcaag 90258 Score = 42.1 bits (21), Expect = 2.2 Identities = 42/49 (85%) Strand = Plus / Minus Query: 115 gttcgacaaggtggaggagctccggccgggcacctacggccacaacctc 163 ||||| ||||||||| ||||| ||||||||||| |||||||| |||| Sbjct: 90457 gttcgtcaaggtggaccagctcaagccgggcacctgcggccacaccctc 90409
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 79.8 bits (40), Expect = 1e-11 Identities = 61/68 (89%) Strand = Plus / Minus Query: 238 gcgcatcgcagagtgcatcgtcggcgacgacaccggggtcgtcgtattcacagcacgcaa 297 ||||||||| |||||| ||||||||||||| ||||||||| |||| ||||| || ||||| Sbjct: 8681902 gcgcatcgccgagtgcctcgtcggcgacgagaccggggtcatcgtcttcaccgcccgcaa 8681843 Query: 298 cgagcaag 305 |||||||| Sbjct: 8681842 cgagcaag 8681835 Score = 77.8 bits (39), Expect = 4e-11 Identities = 99/119 (83%) Strand = Plus / Minus Query: 360 atgtacaaggggtcgatgcgcctggccgtggacaagtgggggacgctcaaggccgccgag 419 |||| ||||||||||||||| || || |||||||||||||||| | || || || || Sbjct: 40182 atgttcaaggggtcgatgcggcttgcggtggacaagtgggggattgtgaaagctgctgaa 40123 Query: 420 agcccggcggacttcaaggtcaaggaggacaacaacgtgtccttgatcgagtttgagct 478 ||||| || || |||| || |||||||| |||||| |||||||||||||||||||||| Sbjct: 40122 agcccagctgatttcacagtgaaggaggataacaacatgtccttgatcgagtttgagct 40064 Score = 42.1 bits (21), Expect = 2.2 Identities = 42/49 (85%) Strand = Plus / Minus Query: 115 gttcgacaaggtggaggagctccggccgggcacctacggccacaacctc 163 ||||| ||||||||| ||||| ||||||||||| |||||||| |||| Sbjct: 8682034 gttcgtcaaggtggaccagctcaagccgggcacctgcggccacaccctc 8681986 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 597 ctcatgttttctcttttctctctct 621 |||||||||||||| |||||||||| Sbjct: 7259261 ctcatgttttctctcttctctctct 7259237
>dbj|AK121085.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064B05, full insert sequence Length = 756 Score = 77.8 bits (39), Expect = 4e-11 Identities = 99/119 (83%) Strand = Plus / Plus Query: 360 atgtacaaggggtcgatgcgcctggccgtggacaagtgggggacgctcaaggccgccgag 419 |||| ||||||||||||||| || || |||||||||||||||| | || || || || Sbjct: 392 atgttcaaggggtcgatgcggcttgcggtggacaagtgggggattgtgaaagctgctgaa 451 Query: 420 agcccggcggacttcaaggtcaaggaggacaacaacgtgtccttgatcgagtttgagct 478 ||||| || || |||| || |||||||| |||||| |||||||||||||||||||||| Sbjct: 452 agcccagctgatttcacagtgaaggaggataacaacatgtccttgatcgagtttgagct 510
>gb|AC073405.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0036D10, complete sequence Length = 156772 Score = 77.8 bits (39), Expect = 4e-11 Identities = 99/119 (83%) Strand = Plus / Minus Query: 360 atgtacaaggggtcgatgcgcctggccgtggacaagtgggggacgctcaaggccgccgag 419 |||| ||||||||||||||| || || |||||||||||||||| | || || || || Sbjct: 40182 atgttcaaggggtcgatgcggcttgcggtggacaagtgggggattgtgaaagctgctgaa 40123 Query: 420 agcccggcggacttcaaggtcaaggaggacaacaacgtgtccttgatcgagtttgagct 478 ||||| || || |||| || |||||||| |||||| |||||||||||||||||||||| Sbjct: 40122 agcccagctgatttcacagtgaaggaggataacaacatgtccttgatcgagtttgagct 40064
>gb|AC152969.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0098I11, complete sequence Length = 122970 Score = 77.8 bits (39), Expect = 4e-11 Identities = 99/119 (83%) Strand = Plus / Minus Query: 360 atgtacaaggggtcgatgcgcctggccgtggacaagtgggggacgctcaaggccgccgag 419 |||| ||||||||||||||| || || |||||||||||||||| | || || || || Sbjct: 49411 atgttcaaggggtcgatgcggcttgcggtggacaagtgggggattgtgaaagctgctgaa 49352 Query: 420 agcccggcggacttcaaggtcaaggaggacaacaacgtgtccttgatcgagtttgagct 478 ||||| || || |||| || |||||||| |||||| |||||||||||||||||||||| Sbjct: 49351 agcccagctgatttcacagtgaaggaggataacaacatgtccttgatcgagtttgagct 49293
>gb|BT016179.1| Zea mays clone Contig12 mRNA sequence Length = 965 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 438 gtcaaggaggacaacaacgtgtccttgatcgagtttgagctcatgaccgt 487 |||||||||||||||||| ||||||| || ||||||||||| ||||||| Sbjct: 554 gtcaaggaggacaacaacctgtccttaattgagtttgagctggtgaccgt 603 Score = 48.1 bits (24), Expect = 0.035 Identities = 39/44 (88%) Strand = Plus / Plus Query: 357 gacatgtacaaggggtcgatgcgcctggccgtggacaagtgggg 400 ||||||| |||||| |||||||| || || |||||||||||||| Sbjct: 473 gacatgttcaagggttcgatgcggcttgcagtggacaagtgggg 516
>gb|AY105519.1| Zea mays PCO124021 mRNA sequence Length = 802 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 438 gtcaaggaggacaacaacgtgtccttgatcgagtttgagctcatgaccgt 487 |||||||||||||||||| ||||||| || ||||||||||| ||||||| Sbjct: 520 gtcaaggaggacaacaacctgtccttaattgagtttgagctggtgaccgt 569 Score = 48.1 bits (24), Expect = 0.035 Identities = 39/44 (88%) Strand = Plus / Plus Query: 357 gacatgtacaaggggtcgatgcgcctggccgtggacaagtgggg 400 ||||||| |||||| |||||||| || || |||||||||||||| Sbjct: 439 gacatgttcaagggttcgatgcggcttgcagtggacaagtgggg 482
>ref|NM_188693.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 426 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 238 gcgcatcgcagagtgcatcgtcggcgacgacaccggggtcgtcgtattcacagcacgcaa 297 ||||||||| |||||| || |||||||||| ||||| | | |||| ||||| || ||||| Sbjct: 171 gcgcatcgcggagtgcctcatcggcgacgagaccggcgccatcgtcttcaccgcccgcaa 230 Query: 298 cgagcaagt 306 ||||||||| Sbjct: 231 cgagcaagt 239
>dbj|AK073776.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033067D04, full insert sequence Length = 854 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 238 gcgcatcgcagagtgcatcgtcggcgacgacaccggggtcgtcgtattcacagcacgcaa 297 ||||||||| |||||| || |||||||||| ||||| | | |||| ||||| || ||||| Sbjct: 310 gcgcatcgcggagtgcctcatcggcgacgagaccggcgccatcgtcttcaccgcccgcaa 369 Query: 298 cgagcaagt 306 ||||||||| Sbjct: 370 cgagcaagt 378
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 238 gcgcatcgcagagtgcatcgtcggcgacgacaccggggtcgtcgtattcacagcacgcaa 297 ||||||||| |||||| || |||||||||| ||||| | | |||| ||||| || ||||| Sbjct: 7669379 gcgcatcgcggagtgcctcatcggcgacgagaccggcgccatcgtcttcaccgcccgcaa 7669438 Query: 298 cgagcaag 305 |||||||| Sbjct: 7669439 cgagcaag 7669446 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 catcgtcggcgacgacaccg 272 |||||||||||||||||||| Sbjct: 30474960 catcgtcggcgacgacaccg 30474979
>dbj|AP002855.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0086P08 Length = 145312 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 238 gcgcatcgcagagtgcatcgtcggcgacgacaccggggtcgtcgtattcacagcacgcaa 297 ||||||||| |||||| || |||||||||| ||||| | | |||| ||||| || ||||| Sbjct: 79955 gcgcatcgcggagtgcctcatcggcgacgagaccggcgccatcgtcttcaccgcccgcaa 80014 Query: 298 cgagcaag 305 |||||||| Sbjct: 80015 cgagcaag 80022
>gb|AC004672.1|AC004672 Homo sapiens 12p13.3-0-2.7 BAC RP5-951N9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 85420 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 588 caatcatggctcatgttttctcttttc 614 ||||||||||||||||||| ||||||| Sbjct: 59809 caatcatggctcatgttttttcttttc 59835
>gb|AC150800.3| Medicago truncatula chromosome 7 BAC clone mth2-77m9, complete sequence Length = 116865 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 526 aggaggaggaggcagaggatga 547 |||||||||||||||||||||| Sbjct: 100557 aggaggaggaggcagaggatga 100536
>emb|BX255934.7| Human DNA sequence from clone RP11-52F5 on chromosome 6, complete sequence Length = 92440 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 603 ttttctcttttctctctctgtt 624 |||||||||||||||||||||| Sbjct: 38511 ttttctcttttctctctctgtt 38490
>emb|AL031785.1|HS478D8 Human DNA sequence from clone RP3-478D8 on chromosome 6p24, complete sequence Length = 152553 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 603 ttttctcttttctctctctgtt 624 |||||||||||||||||||||| Sbjct: 101730 ttttctcttttctctctctgtt 101751
>gb|AC158973.3| Mus musculus chromosome 15, clone RP24-236A19, complete sequence Length = 187091 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 526 aggaggaggaggcagaggatga 547 |||||||||||||||||||||| Sbjct: 151964 aggaggaggaggcagaggatga 151943
>gb|AC007211.6| Arabidopsis thaliana chromosome 2 BAC F1O13 genomic sequence, complete sequence Length = 103889 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 600 atgttttctcttttctctctct 621 |||||||||||||||||||||| Sbjct: 59179 atgttttctcttttctctctct 59200
>gb|AC006264.4| Arabidopsis thaliana chromosome 2 clone F26H11 map mi148, complete sequence Length = 93220 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 600 atgttttctcttttctctctct 621 |||||||||||||||||||||| Sbjct: 36750 atgttttctcttttctctctct 36729
>gb|AC020599.4|AC020599 Homo sapiens BAC clone RP11-440L13 from 4, complete sequence Length = 173821 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 527 ggaggaggaggcagaggatgat 548 |||||||||||||||||||||| Sbjct: 80068 ggaggaggaggcagaggatgat 80047
>gb|AC101819.10| Mus musculus chromosome 15, clone RP24-375C3, complete sequence Length = 131280 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 526 aggaggaggaggcagaggatga 547 |||||||||||||||||||||| Sbjct: 15145 aggaggaggaggcagaggatga 15166
>gb|AF296838.1|T29J13 Arabidopsis thaliana BAC T29J13 Length = 100592 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 600 atgttttctcttttctctctct 621 |||||||||||||||||||||| Sbjct: 23146 atgttttctcttttctctctct 23167 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 600 atgttttctcttttctctctct 621 |||||||||||||||||||||| Sbjct: 21159 atgttttctcttttctctctct 21138
>dbj|AB024038.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MTC11 Length = 83859 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 600 atgttttctcttttctctctct 621 |||||||||||||||||||||| Sbjct: 56768 atgttttctcttttctctctct 56789
>gb|AC174441.1| Homo sapiens chromosome 6 clone WI2-992I18, complete sequence Length = 40479 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 603 ttttctcttttctctctctgtt 624 |||||||||||||||||||||| Sbjct: 11559 ttttctcttttctctctctgtt 11538
>ref|NM_115566.3| Arabidopsis thaliana electron transporter AT3G57070 mRNA, complete cds Length = 1724 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 604 tttctcttttctctctctgtt 624 ||||||||||||||||||||| Sbjct: 122 tttctcttttctctctctgtt 142
>gb|U71442.1|SCU71442 Sarcoptes scabiei type hominis microsatellite Sarms1 sequence Length = 151 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 601 tgttttctcttttctctctct 621 ||||||||||||||||||||| Sbjct: 71 tgttttctcttttctctctct 51
>gb|AC137001.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0012L23, complete sequence Length = 121659 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 597 ctcatgttttctcttttctctctct 621 |||||||||||||| |||||||||| Sbjct: 119275 ctcatgttttctctcttctctctct 119251
>gb|AF026206.1| Caenorhabditis elegans cosmid T28B4, complete sequence Length = 27333 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 599 catgttttctcttttctctct 619 ||||||||||||||||||||| Sbjct: 19756 catgttttctcttttctctct 19736
>gb|AC124349.4| Mus musculus BAC clone RP24-463G19 from chromosome 12, complete sequence Length = 122944 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 526 aggaggaggaggcagaggatg 546 ||||||||||||||||||||| Sbjct: 69987 aggaggaggaggcagaggatg 70007
>gb|AC157349.7| Medicago truncatula clone mth2-139l1, complete sequence Length = 116909 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 597 ctcatgttttctcttttctctctct 621 |||||| |||||||||||||||||| Sbjct: 79467 ctcatgctttctcttttctctctct 79443
>emb|AL161782.14| Human DNA sequence from clone RP11-327L9 on chromosome 9, complete sequence Length = 77399 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 598 tcatgttttctcttttctctc 618 ||||||||||||||||||||| Sbjct: 70343 tcatgttttctcttttctctc 70363
>emb|AL138655.1|ATF24I3 Arabidopsis thaliana DNA chromosome 3, BAC clone F24I3 Length = 91303 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 604 tttctcttttctctctctgtt 624 ||||||||||||||||||||| Sbjct: 52055 tttctcttttctctctctgtt 52075
>emb|BX072572.8| Zebrafish DNA sequence from clone CH211-119A17, complete sequence Length = 173988 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 585 ggccaatcatggctcatgttt 605 ||||||||||||||||||||| Sbjct: 124876 ggccaatcatggctcatgttt 124856
>gb|AC016816.5| Homo sapiens chromosome 10 clone RP11-113P9, complete sequence Length = 174311 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 197 ctccacaggcagcaccagggc 217 ||||||||||||||||||||| Sbjct: 41516 ctccacaggcagcaccagggc 41496
>gb|AC027669.11| Homo sapiens chromosome 10 clone RP11-165N2, complete sequence Length = 177135 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 197 ctccacaggcagcaccagggc 217 ||||||||||||||||||||| Sbjct: 128158 ctccacaggcagcaccagggc 128138
>gb|AC027506.12| Homo sapiens chromosome 18, clone RP11-762J3, complete sequence Length = 189781 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 604 tttctcttttctctctctgtt 624 ||||||||||||||||||||| Sbjct: 165694 tttctcttttctctctctgtt 165714
>gb|AC091609.2| Homo sapiens chromosome 1 clone RP11-109I2, complete sequence Length = 183521 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 599 catgttttctcttttctctct 619 ||||||||||||||||||||| Sbjct: 27005 catgttttctcttttctctct 26985
>gb|AC159251.2| Mus musculus BAC clone RP24-113B8 from chromosome 12, complete sequence Length = 200896 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 526 aggaggaggaggcagaggatg 546 ||||||||||||||||||||| Sbjct: 176794 aggaggaggaggcagaggatg 176814
>emb|BX823569.1|CNS0A5CH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS51ZF01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1609 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 604 tttctcttttctctctctgtt 624 ||||||||||||||||||||| Sbjct: 122 tttctcttttctctctctgtt 142
>gb|AC148174.7| Mus musculus chromosome 19, clone RP23-300E3, complete sequence Length = 166901 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 601 tgttttctcttttctctctct 621 ||||||||||||||||||||| Sbjct: 120348 tgttttctcttttctctctct 120328
>emb|CR855299.12| Zebrafish DNA sequence from clone CH211-199C22 in linkage group 16, complete sequence Length = 116933 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 525 taggaggaggaggcagaggatgatg 549 ||||||||||||| ||||||||||| Sbjct: 9126 taggaggaggaggaagaggatgatg 9102
>emb|AJ297523.1|MCI297523 Mucor circinelloides cigA gene Length = 2092 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 601 tgttttctcttttctctctct 621 ||||||||||||||||||||| Sbjct: 396 tgttttctcttttctctctct 416
>gb|AC162463.9| Mus musculus chromosome 19, clone RP24-319M18, complete sequence Length = 161471 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 601 tgttttctcttttctctctct 621 ||||||||||||||||||||| Sbjct: 9724 tgttttctcttttctctctct 9704
>gb|U68299.1|MCU68299 Mouse cytomegalovirus 1 complete genomic sequence Length = 230278 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 174 tcctcagctccaagcccgtcg 194 ||||||||||||||||||||| Sbjct: 61358 tcctcagctccaagcccgtcg 61338
>gb|AC152975.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNOa0158O07, complete sequence Length = 40515 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 597 ctcatgttttctcttttctctctct 621 |||||||||||||| |||||||||| Sbjct: 23593 ctcatgttttctctcttctctctct 23569
>gb|AC102381.12| Mus musculus chromosome 8, clone RP24-180I19, complete sequence Length = 190298 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 528 gaggaggaggcagaggatgatgctcagc 555 ||||||||||||||||| |||| ||||| Sbjct: 45647 gaggaggaggcagaggaggatgatcagc 45620
>ref|XM_512572.1| PREDICTED: Pan troglodytes similar to low density lipoprotein receptor-related protein 3 (LOC455929), mRNA Length = 2628 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 cacaggcagcaccagggcgg 219 |||||||||||||||||||| Sbjct: 2121 cacaggcagcaccagggcgg 2140
>gb|AC165356.5| Mus musculus BAC clone RP23-142E18 from chromosome 7, complete sequence Length = 207936 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 526 aggaggaggaggcagaggat 545 |||||||||||||||||||| Sbjct: 92979 aggaggaggaggcagaggat 92960
>ref|XM_481545.1| Oryza sativa (japonica cultivar-group), mRNA Length = 372 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 173 gtcctcagctccaagcccgtcgtcctcc 200 |||| |||| |||||||||||||||||| Sbjct: 63 gtccgcagcaccaagcccgtcgtcctcc 36
>ref|NM_191885.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 960 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 catcgtcggcgacgacaccg 272 |||||||||||||||||||| Sbjct: 48 catcgtcggcgacgacaccg 29
>ref|XM_526335.1| PREDICTED: Pan troglodytes similar to progestin and adipoQ receptor family member IX (LOC470952), mRNA Length = 1134 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 ccacaggcagcaccagggcg 218 |||||||||||||||||||| Sbjct: 649 ccacaggcagcaccagggcg 630
>ref|XM_470826.1| Oryza sativa (japonica cultivar-group), mRNA Length = 369 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 173 gtcctcagctccaagcccgtcgtcctcc 200 |||| |||| |||||||||||||||||| Sbjct: 99 gtccgcagcgccaagcccgtcgtcctcc 72
>gb|AY360384.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0079I01, complete sequence Length = 178920 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 173 gtcctcagctccaagcccgtcgtcctcc 200 |||| |||| |||||||||||||||||| Sbjct: 57973 gtccgcagcaccaagcccgtcgtcctcc 58000
>gb|AC146937.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0004O15 map near R3342S, complete sequence Length = 140142 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 598 tcatgttttctcttttctctctct 621 ||||||||||| |||||||||||| Sbjct: 104634 tcatgttttcttttttctctctct 104611
>ref|NM_198504.1| Homo sapiens progestin and adipoQ receptor family member IX (PAQR9), mRNA Length = 2103 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 ccacaggcagcaccagggcg 218 |||||||||||||||||||| Sbjct: 649 ccacaggcagcaccagggcg 630
>gb|AY424287.1| Homo sapiens progestin and adipoQ receptor family member IX (PAQR9) mRNA, complete cds Length = 1321 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 ccacaggcagcaccagggcg 218 |||||||||||||||||||| Sbjct: 726 ccacaggcagcaccagggcg 707
>ref|XM_603446.2| PREDICTED: Bos taurus hypothetical LOC525100 (LOC525100), partial mRNA Length = 1470 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ccagctcagggtcctcagct 182 |||||||||||||||||||| Sbjct: 1182 ccagctcagggtcctcagct 1201
>ref|XM_413714.1| PREDICTED: Gallus gallus similar to egg-specific protein (LOC415327), mRNA Length = 2820 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 gaggaggaggcagaggatga 547 |||||||||||||||||||| Sbjct: 1990 gaggaggaggcagaggatga 2009
>ref|XM_614675.2| PREDICTED: Bos taurus similar to inter-alpha trypsin inhibitor heavy chain precursor 5 isoform 1 (LOC534787), mRNA Length = 4437 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 604 tttctcttttctctctctgt 623 |||||||||||||||||||| Sbjct: 308 tttctcttttctctctctgt 289
>gb|BC007408.2| Homo sapiens low density lipoprotein receptor-related protein 3, mRNA (cDNA clone MGC:2428 IMAGE:3009711), complete cds Length = 2418 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 cacaggcagcaccagggcgg 219 |||||||||||||||||||| Sbjct: 1990 cacaggcagcaccagggcgg 2009
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 522 gcctaggaggaggaggcaga 541 |||||||||||||||||||| Sbjct: 34025698 gcctaggaggaggaggcaga 34025679 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 173 gtcctcagctccaagcccgtcgtcctcc 200 |||| |||| |||||||||||||||||| Sbjct: 15612473 gtccgcagcgccaagcccgtcgtcctcc 15612446
>gb|AC163636.5| Mus musculus BAC clone RP24-499E13 from chromosome 1, complete sequence Length = 173781 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 603 ttttctcttttctctctctg 622 |||||||||||||||||||| Sbjct: 40661 ttttctcttttctctctctg 40680
>gb|AC141437.4| Mus musculus BAC clone RP23-283O7 from chromosome 19, complete sequence Length = 134644 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 605 ttctcttttctctctctgtt 624 |||||||||||||||||||| Sbjct: 61363 ttctcttttctctctctgtt 61382
>gb|AC099323.6| Oryza sativa chromosome 3 BAC OSJNBa0065F09 genomic sequence, complete sequence Length = 115079 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 173 gtcctcagctccaagcccgtcgtcctcc 200 |||| |||| |||||||||||||||||| Sbjct: 112024 gtccgcagcgccaagcccgtcgtcctcc 111997
>emb|Z82076.1|CEW07G1 Caenorhabditis elegans Cosmid W07G1, complete sequence Length = 36480 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 526 aggaggaggaggcagaggatgatg 549 |||||||||||| ||||||||||| Sbjct: 27900 aggaggaggaggaagaggatgatg 27877
>gb|AC134842.3| Mus musculus BAC clone RP24-375P18 from chromosome 14, complete sequence Length = 154676 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 598 tcatgttttctcttttctctctct 621 ||||||||||||| |||||||||| Sbjct: 20637 tcatgttttctctcttctctctct 20614
>gb|AC123871.4| Mus musculus BAC clone RP23-247L8 from chromosome 7, complete sequence Length = 184312 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 526 aggaggaggaggcagaggat 545 |||||||||||||||||||| Sbjct: 122591 aggaggaggaggcagaggat 122572
>gb|AC125195.4| Mus musculus BAC clone RP23-246M2 from 2, complete sequence Length = 195041 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 gaggaggaggcagaggatga 547 |||||||||||||||||||| Sbjct: 165357 gaggaggaggcagaggatga 165338
>emb|CR855278.2| Platypus DNA sequence from clone XX-235F6, complete sequence Length = 140510 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 602 gttttctcttttctctctct 621 |||||||||||||||||||| Sbjct: 88652 gttttctcttttctctctct 88633
>gb|AC110241.17| Mus musculus chromosome 16, clone RP23-129F22, complete sequence Length = 256720 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 526 aggaggaggaggcagaggatgatg 549 |||||||||||| ||||||||||| Sbjct: 210671 aggaggaggaggaagaggatgatg 210694
>gb|AC144430.14| Medicago truncatula clone mth2-16j2, complete sequence Length = 125368 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 gaggaggaggcagaggatga 547 |||||||||||||||||||| Sbjct: 22058 gaggaggaggcagaggatga 22077
>emb|AL592427.6| Human DNA sequence from clone RP11-57F5 on chromosome X, complete sequence Length = 140691 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 602 gttttctcttttctctctct 621 |||||||||||||||||||| Sbjct: 32764 gttttctcttttctctctct 32745
>emb|AL391726.8| Human DNA sequence from clone RP11-86O4 on chromosome 6 Contains part of the gene for androgen induced protein (AIG-1) (CGI-103) (includes FLJ10485), complete sequence Length = 121029 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 602 gttttctcttttctctctct 621 |||||||||||||||||||| Sbjct: 10280 gttttctcttttctctctct 10261
>gb|BT009868.1| Synthetic construct Homo sapiens low density lipoprotein receptor-related protein 3 mRNA, partial cds Length = 2313 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 cacaggcagcaccagggcgg 219 |||||||||||||||||||| Sbjct: 1968 cacaggcagcaccagggcgg 1987
>emb|AL157838.24| Human DNA sequence from clone RP4-724E16 on chromosome 20q13.12-13.32 Contains the ZNF217 gene for zinc finger protein 217, the gene for a novel protein (FLJ14031) and two CpG islands, complete sequence Length = 128871 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 602 gttttctcttttctctctct 621 |||||||||||||||||||| Sbjct: 89455 gttttctcttttctctctct 89436
>gb|AC021074.15| Homo sapiens 3 BAC RP11-372E1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 183100 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 ccacaggcagcaccagggcg 218 |||||||||||||||||||| Sbjct: 36002 ccacaggcagcaccagggcg 35983
>gb|AC116166.6| Homo sapiens chromosome 15, clone RP11-475F15, complete sequence Length = 174164 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 600 atgttttctcttttctctct 619 |||||||||||||||||||| Sbjct: 93415 atgttttctcttttctctct 93396
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 376 tgcgcctggccgtggacaag 395 |||||||||||||||||||| Sbjct: 2169077 tgcgcctggccgtggacaag 2169058
>emb|AL606690.3|OSJN00080 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060D06, complete sequence Length = 151506 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 526 aggaggaggaggcagaggatgatg 549 ||||||||||||||| |||||||| Sbjct: 121055 aggaggaggaggcagcggatgatg 121078
>emb|AL732622.4| Mouse DNA sequence from clone RP23-277G3 on chromosome 11 Contains part of the Ebf1 gene for early B-cell factor 1, complete sequence Length = 126781 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 602 gttttctcttttctctctct 621 |||||||||||||||||||| Sbjct: 85182 gttttctcttttctctctct 85163
>emb|AJ721114.1| Gallus gallus mRNA for hypothetical protein, clone 35i21 Length = 4793 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 526 aggaggaggaggcagaggatgatg 549 |||||||||||| ||||||||||| Sbjct: 867 aggaggaggaggaagaggatgatg 890
>gb|AC182629.3| Mus musculus BAC clone RP24-573O8 from chromosome 7, complete sequence Length = 168009 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 526 aggaggaggaggcagaggat 545 |||||||||||||||||||| Sbjct: 59913 aggaggaggaggcagaggat 59894
>emb|CR860751.1| Pongo pygmaeus mRNA; cDNA DKFZp459P1927 (from clone DKFZp459P1927) Length = 4114 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 598 tcatgttttctcttttctct 617 |||||||||||||||||||| Sbjct: 1137 tcatgttttctcttttctct 1118
>dbj|AK126750.1| Homo sapiens cDNA FLJ44797 fis, clone BRACE3040644, highly similar to Homo sapiens low density lipoprotein receptor-related protein 3 (LRP3) Length = 3278 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 cacaggcagcaccagggcgg 219 |||||||||||||||||||| Sbjct: 2869 cacaggcagcaccagggcgg 2888
>dbj|AK123932.1| Homo sapiens cDNA FLJ41938 fis, clone PERIC2006035 Length = 2103 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 ccacaggcagcaccagggcg 218 |||||||||||||||||||| Sbjct: 649 ccacaggcagcaccagggcg 630
>emb|CR602048.1| full-length cDNA clone CS0DB007YB22 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1014 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 cacaggcagcaccagggcgg 219 |||||||||||||||||||| Sbjct: 625 cacaggcagcaccagggcgg 644
>dbj|AK074751.1| Homo sapiens cDNA FLJ90270 fis, clone NT2RM4002352, highly similar to Low density lipoprotein (LDL) receptor-related protein 3 Length = 2186 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 cacaggcagcaccagggcgg 219 |||||||||||||||||||| Sbjct: 1777 cacaggcagcaccagggcgg 1796
>tpg|BK005017.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) WRKY transcription factor 14 (WRKY14) gene, complete cds Length = 1093 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 catcgtcggcgacgacaccg 272 |||||||||||||||||||| Sbjct: 48 catcgtcggcgacgacaccg 29
>gb|AC164109.2| Mus musculus BAC clone RP24-142E9 from chromosome 9, complete sequence Length = 147109 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 524 ctaggaggaggaggcagagg 543 |||||||||||||||||||| Sbjct: 54509 ctaggaggaggaggcagagg 54490
>emb|CR523070.1| Gallus gallus finished cDNA, clone ChEST566n13 Length = 825 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 526 aggaggaggaggcagaggatgatg 549 |||||||||||| ||||||||||| Sbjct: 5 aggaggaggaggaagaggatgatg 28
>gb|AC161419.2| Mus musculus BAC clone RP23-405I13 from chromosome 9, complete sequence Length = 213468 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 524 ctaggaggaggaggcagagg 543 |||||||||||||||||||| Sbjct: 4730 ctaggaggaggaggcagagg 4749
>emb|CR389523.1| Gallus gallus finished cDNA, clone ChEST299h6 Length = 1786 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 526 aggaggaggaggcagaggatgatg 549 |||||||||||| ||||||||||| Sbjct: 71 aggaggaggaggaagaggatgatg 94
>gb|AC097279.5| Oryza sativa chromosome 3 BAC OSJNBa0093I13 genomic sequence, complete sequence Length = 178748 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 173 gtcctcagctccaagcccgtcgtcctcc 200 |||| |||| |||||||||||||||||| Sbjct: 22427 gtccgcagcgccaagcccgtcgtcctcc 22400
>ref|NM_001027227.2| Caenorhabditis elegans W07G1.5a (W07G1.5) mRNA, complete cds Length = 1354 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 526 aggaggaggaggcagaggatgatg 549 |||||||||||| ||||||||||| Sbjct: 1224 aggaggaggaggaagaggatgatg 1247
>ref|NM_001027228.2| Caenorhabditis elegans W07G1.5b (W07G1.5) mRNA, complete cds Length = 1390 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 526 aggaggaggaggcagaggatgatg 549 |||||||||||| ||||||||||| Sbjct: 1260 aggaggaggaggaagaggatgatg 1283
>gb|AC013604.9|AC013604 Homo sapiens, clone RP11-10E14, complete sequence Length = 167236 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 604 tttctcttttctctctctgt 623 |||||||||||||||||||| Sbjct: 159426 tttctcttttctctctctgt 159407
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 526 aggaggaggaggcagaggatgatg 549 ||||||||||||||| |||||||| Sbjct: 33348794 aggaggaggaggcagcggatgatg 33348817
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 aggtggaggagctccggccgggca 146 |||||||||||||||||| ||||| Sbjct: 27126117 aggtggaggagctccggctgggca 27126140
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 598 tcatgttttctcttttctctctct 621 ||||||||||| |||||||||||| Sbjct: 27617339 tcatgttttcttttttctctctct 27617362
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 173 gtcctcagctccaagcccgtcgtcctcc 200 |||| |||| |||||||||||||||||| Sbjct: 13645767 gtccgcagcaccaagcccgtcgtcctcc 13645740
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 522 gcctaggaggaggaggcaga 541 |||||||||||||||||||| Sbjct: 34116170 gcctaggaggaggaggcaga 34116151 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 173 gtcctcagctccaagcccgtcgtcctcc 200 |||| |||| |||||||||||||||||| Sbjct: 15607007 gtccgcagcgccaagcccgtcgtcctcc 15606980
>gb|AC010708.10|AC010708 Drosophila melanogaster, chromosome X, region 17A-17B, BAC clone BACR10E05, complete sequence Length = 188766 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 cagcacgcaacgagcaagtg 307 |||||||||||||||||||| Sbjct: 185454 cagcacgcaacgagcaagtg 185473
>gb|AC012098.9|AC012098 Drosophila melanogaster, chromosome X, region 17A-17B, BAC clone BACR03K10, complete sequence Length = 188489 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 cagcacgcaacgagcaagtg 307 |||||||||||||||||||| Sbjct: 100831 cagcacgcaacgagcaagtg 100850
>dbj|AP000054.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 25/28, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 605 ttctcttttctctctctgtt 624 |||||||||||||||||||| Sbjct: 2111 ttctcttttctctctctgtt 2130
>gb|AC010146.13| Homo sapiens BAC clone RP11-355I13 from 2, complete sequence Length = 211748 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 593 atggctcatgttttctcttttctctctc 620 ||||||| ||||||||||||||| |||| Sbjct: 172114 atggctcctgttttctcttttctttctc 172087
>gb|AC133007.4| Oryza sativa chromosome 3 BAC OSJNBa0094J08 genomic sequence, complete sequence Length = 172337 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 gcctaggaggaggaggcaga 541 |||||||||||||||||||| Sbjct: 31993 gcctaggaggaggaggcaga 32012
>dbj|AP003142.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0435H01 Length = 160141 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 catcgtcggcgacgacaccg 272 |||||||||||||||||||| Sbjct: 103223 catcgtcggcgacgacaccg 103242
>dbj|AB112773.1| Oryza sativa (japonica cultivar-group) OsCAX3 mRNA for cation/proton exchanger 3, complet cds Length = 1985 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 526 aggaggaggaggcagaggatgatg 549 ||||||||||||||| |||||||| Sbjct: 265 aggaggaggaggcagcggatgatg 288
>gb|AE004530.1| Pseudomonas aeruginosa PAO1, section 91 of 529 of the complete genome Length = 13263 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 tgcgcctggccgtggacaag 395 |||||||||||||||||||| Sbjct: 4904 tgcgcctggccgtggacaag 4923
>gb|AC008738.7| Homo sapiens chromosome 19 clone CTD-2540B15, complete sequence Length = 219821 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 cacaggcagcaccagggcgg 219 |||||||||||||||||||| Sbjct: 76349 cacaggcagcaccagggcgg 76368
>ref|NM_002333.1| Homo sapiens low density lipoprotein receptor-related protein 3 (LRP3), mRNA Length = 2601 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 cacaggcagcaccagggcgg 219 |||||||||||||||||||| Sbjct: 2194 cacaggcagcaccagggcgg 2213
>ref|XM_341666.2| PREDICTED: Rattus norvegicus zinc finger protein 330 (predicted) (Zfp330_predicted), mRNA Length = 2135 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 526 aggaggaggaggcagaggatgatg 549 |||||||||| ||||||||||||| Sbjct: 1406 aggaggaggaagcagaggatgatg 1429
>gb|AC135069.17| Homo sapiens chromosome 15, clone RP11-1081C20, complete sequence Length = 222726 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 600 atgttttctcttttctctct 619 |||||||||||||||||||| Sbjct: 190011 atgttttctcttttctctct 189992
>gb|AC116165.7| Homo sapiens chromosome 15, clone RP11-467N20, complete sequence Length = 181697 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 600 atgttttctcttttctctct 619 |||||||||||||||||||| Sbjct: 137024 atgttttctcttttctctct 137043
>gb|AC121562.8| Homo sapiens chromosome 15, clone CTD-2024P22, complete sequence Length = 118499 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 600 atgttttctcttttctctct 619 |||||||||||||||||||| Sbjct: 115200 atgttttctcttttctctct 115219
>dbj|AP008227.1| Thermus thermophilus HB8 plasmid pTT27 DNA, complete sequence Length = 256992 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 cgtggaggcgaggaaggcga 351 |||||||||||||||||||| Sbjct: 137626 cgtggaggcgaggaaggcga 137607
>dbj|AP005407.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0019N02 Length = 152373 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 173 gtcctcagctccaagcccgtcgtcctcc 200 |||| |||| |||||||||||||||||| Sbjct: 103213 gtccgcagcaccaagcccgtcgtcctcc 103186
>gb|AY892226.1| Synthetic construct Homo sapiens clone FLH014079.01L low density lipoprotein receptor-related protein 3 (LRP3) mRNA, partial cds Length = 2313 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 cacaggcagcaccagggcgg 219 |||||||||||||||||||| Sbjct: 1968 cacaggcagcaccagggcgg 1987
>dbj|BS000190.1| Pan troglodytes chromosome 22 clone:RP43-031M16, map 22, complete sequences Length = 153118 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 605 ttctcttttctctctctgtt 624 |||||||||||||||||||| Sbjct: 62811 ttctcttttctctctctgtt 62830
>dbj|AK109770.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-A06, full insert sequence Length = 1603 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 catcgtcggcgacgacaccg 272 |||||||||||||||||||| Sbjct: 148 catcgtcggcgacgacaccg 129
>dbj|AK073795.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068D06, full insert sequence Length = 1915 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 526 aggaggaggaggcagaggatgatg 549 ||||||||||||||| |||||||| Sbjct: 195 aggaggaggaggcagcggatgatg 218
>gb|AC127686.4| Mus musculus BAC clone RP24-188G23 from 3, complete sequence Length = 173474 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 526 aggaggaggaggcagaggat 545 |||||||||||||||||||| Sbjct: 156835 aggaggaggaggcagaggat 156816
>gb|U59310.1|FSU59310 Nectria haematococca histidine kinase (fik) mRNA, partial cds Length = 2785 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 agcagggcaagggcagcgag 108 |||||||||||||||||||| Sbjct: 1325 agcagggcaagggcagcgag 1344
>gb|AE003509.5| Drosophila melanogaster chromosome X, section 61 of 74 of the complete sequence Length = 315109 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 cagcacgcaacgagcaagtg 307 |||||||||||||||||||| Sbjct: 24843 cagcacgcaacgagcaagtg 24862
>gb|U61838.1|FSU61838 Fusarium solani f. sp. pisi histidine kinase FIK (fik) gene, complete cds Length = 5092 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 agcagggcaagggcagcgag 108 |||||||||||||||||||| Sbjct: 3729 agcagggcaagggcagcgag 3748
>dbj|AP001720.1| Homo sapiens genomic DNA, chromosome 21q, section 64/105 Length = 340000 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 605 ttctcttttctctctctgtt 624 |||||||||||||||||||| Sbjct: 84320 ttctcttttctctctctgtt 84339
>emb|CT573093.3| CH250-1K10, complete sequence Length = 185363 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 taggaggaggaggcagagga 544 |||||||||||||||||||| Sbjct: 109805 taggaggaggaggcagagga 109786
>gb|AC005808.1|AC005808 Homo sapiens chromosome 20, P1 clone 185 (LBNL H136), complete sequence Length = 57434 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 602 gttttctcttttctctctct 621 |||||||||||||||||||| Sbjct: 2853 gttttctcttttctctctct 2834
>gb|DQ176000.1| Xenopus laevis RPGR ORF15 isoform mRNA, partial cds Length = 1845 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 526 aggaggaggaggcagaggatgatg 549 |||||||||||| ||||||||||| Sbjct: 1433 aggaggaggagggagaggatgatg 1456
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 376 tgcgcctggccgtggacaag 395 |||||||||||||||||||| Sbjct: 3411076 tgcgcctggccgtggacaag 3411057
>gb|AC113180.5| Mus musculus chromosome 16, clone RP23-366B13, complete sequence Length = 215198 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 526 aggaggaggaggcagaggatgatg 549 |||||||||||| ||||||||||| Sbjct: 112708 aggaggaggaggaagaggatgatg 112731
>gb|AC174380.3| Mus musculus BAC clone RP24-196H4 from chromosome 7, complete sequence Length = 173395 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 526 aggaggaggaggcagaggat 545 |||||||||||||||||||| Sbjct: 16287 aggaggaggaggcagaggat 16268
>gb|AF085860.1|HUMYN66D10 Homo sapiens full length insert cDNA clone YN66D10 Length = 521 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 cacaggcagcaccagggcgg 219 |||||||||||||||||||| Sbjct: 102 cacaggcagcaccagggcgg 121
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 598 tcatgttttctcttttctctctct 621 ||||||||||| |||||||||||| Sbjct: 27641327 tcatgttttcttttttctctctct 27641350
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 aggtggaggagctccggccgggca 146 |||||||||||||||||| ||||| Sbjct: 27051714 aggtggaggagctccggctgggca 27051737
>emb|AL713905.6|CNS07YQ5 Oryza sativa chromosome 12, . BAC OJ1584_D02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131300 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 aggtggaggagctccggccgggca 146 |||||||||||||||||| ||||| Sbjct: 30120 aggtggaggagctccggctgggca 30097
>emb|AL731887.5|CNS08C8R Oryza sativa chromosome 12, . BAC OJ1559_C07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145816 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 aggtggaggagctccggccgggca 146 |||||||||||||||||| ||||| Sbjct: 65013 aggtggaggagctccggctgggca 65036
>gb|AY870603.1| Oryza sativa (japonica cultivar-group) WRKY14 mRNA, complete cds Length = 1221 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 catcgtcggcgacgacaccg 272 |||||||||||||||||||| Sbjct: 119 catcgtcggcgacgacaccg 100
>gb|AE017222.1| Thermus thermophilus HB27 plasmid pTT27, complete sequence Length = 232605 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 cgtggaggcgaggaaggcga 351 |||||||||||||||||||| Sbjct: 93951 cgtggaggcgaggaaggcga 93932
>gb|AC134566.5| Mus musculus BAC clone RP24-196G8 from 3, complete sequence Length = 147839 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 526 aggaggaggaggcagaggat 545 |||||||||||||||||||| Sbjct: 137939 aggaggaggaggcagaggat 137958
>gb|AC142266.3| Mus musculus BAC clone RP24-380K14 from 14, complete sequence Length = 185704 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 598 tcatgttttctcttttctctctct 621 ||||||||||||| |||||||||| Sbjct: 138729 tcatgttttctctcttctctctct 138706
>gb|AF049454.1|AF049454 Lamarchea hakeifolia 5S ribosomal RNA gene, partial sequence; and 5S ribosomal RNA intergenic spacer, complete sequence Length = 422 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 gcgacgacaccggggtcgtc 280 |||||||||||||||||||| Sbjct: 131 gcgacgacaccggggtcgtc 112
>emb|CT025583.7| Mouse DNA sequence from clone RP24-68O11 on chromosome 14, complete sequence Length = 201727 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 604 tttctcttttctctctctgt 623 |||||||||||||||||||| Sbjct: 37993 tttctcttttctctctctgt 38012
>emb|CR354605.8| Zebrafish DNA sequence from clone DKEY-5I9 in linkage group 14, complete sequence Length = 196530 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 601 tgttttctcttttctctctc 620 |||||||||||||||||||| Sbjct: 139925 tgttttctcttttctctctc 139906
>emb|AL671870.18| Mouse DNA sequence from clone RP23-204I23 on chromosome X, complete sequence Length = 184700 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 526 aggaggaggaggcagaggatgatg 549 |||||||||||| ||||||||||| Sbjct: 170106 aggaggaggaggaagaggatgatg 170083
>ref|NM_001030834.1| Gallus gallus protein phosphatase methylesterase 1 (PPME1), mRNA Length = 4793 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 526 aggaggaggaggcagaggatgatg 549 |||||||||||| ||||||||||| Sbjct: 867 aggaggaggaggaagaggatgatg 890
>emb|AL831727.6| Mouse DNA sequence from clone RP23-210M20 on chromosome 4, complete sequence Length = 176930 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 587 ccaatcatggctcatgtttt 606 |||||||||||||||||||| Sbjct: 122915 ccaatcatggctcatgtttt 122896
>emb|AL670603.6| Mouse DNA sequence from clone RP23-276M23 on chromosome 4, complete sequence Length = 173696 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 526 aggaggaggaggcagaggatgatg 549 |||||||||||| ||||||||||| Sbjct: 8555 aggaggaggaggaagaggatgatg 8532
>emb|AL772188.8| Mouse DNA sequence from clone RP23-143O19 on chromosome 2, complete sequence Length = 207403 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 gaggaggaggcagaggatga 547 |||||||||||||||||||| Sbjct: 24479 gaggaggaggcagaggatga 24460
>emb|AL833798.8| Mouse DNA sequence from clone RP23-130L21 on chromosome 4, complete sequence Length = 214799 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 taggaggaggaggcagagga 544 |||||||||||||||||||| Sbjct: 141819 taggaggaggaggcagagga 141800
>gb|AF518313.1| Scyliorhinus canicula zinc finger transcription factor Snai1 (Snai1) mRNA, partial cds Length = 478 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 ctcatctccaacctctgctctgct 54 |||||||||| ||||||||||||| Sbjct: 130 ctcatctccagcctctgctctgct 153
>dbj|AP000325.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone:Q50B12, complete sequence Length = 20462 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 605 ttctcttttctctctctgtt 624 |||||||||||||||||||| Sbjct: 4596 ttctcttttctctctctgtt 4615
>dbj|AP000168.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone B2344F14-f50E8, segment 4/9, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 605 ttctcttttctctctctgtt 624 |||||||||||||||||||| Sbjct: 94079 ttctcttttctctctctgtt 94098
>dbj|AB009462.1| Homo sapiens hLRp105 mRNA for LDL receptor related protein 105, complete cds Length = 2601 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 cacaggcagcaccagggcgg 219 |||||||||||||||||||| Sbjct: 2194 cacaggcagcaccagggcgg 2213
>dbj|D83138.1|PSERUVABC Pseudomonas aeruginosa ruvC, ruvA and ruvB genes for Holliday junction-related proteins Length = 4248 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 tgcgcctggccgtggacaag 395 |||||||||||||||||||| Sbjct: 1297 tgcgcctggccgtggacaag 1316 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,049,552 Number of Sequences: 3902068 Number of extensions: 7049552 Number of successful extensions: 175095 Number of sequences better than 10.0: 156 Number of HSP's better than 10.0 without gapping: 160 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 173676 Number of HSP's gapped (non-prelim): 1419 length of query: 624 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 601 effective length of database: 17,143,297,704 effective search space: 10303121920104 effective search space used: 10303121920104 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
