ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd26l16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_480372.1| Oryza sativa (japonica cultivar-group), mRNA 613 e-172
2dbj|AK121489.1| Oryza sativa (japonica cultivar-group) cDNA clon... 613 e-172
3dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 198 1e-47
4dbj|AP004692.2| Oryza sativa (japonica cultivar-group) genomic D... 198 1e-47
5ref|NM_117606.3| Arabidopsis thaliana unknown protein AT4G15180 ... 82 2e-12
6gb|AY103869.1| Zea mays PCO114486 mRNA sequence 76 1e-10
7gb|AC145218.29| Medicago truncatula clone mth2-34l18, complete s... 50 0.008
8emb|Z97338.2|ATFCA3 Arabidopsis thaliana DNA chromosome 4, ESSA ... 48 0.032
9emb|AL161540.2|ATCHRIV40 Arabidopsis thaliana DNA chromosome 4, ... 48 0.032
10emb|AL513190.13| Human DNA sequence from clone RP11-12J10 on chr... 42 2.0
11gb|AC083801.20| Homo sapiens 3 BAC RP11-646E18 (Roswell Park Can... 42 2.0
12gb|AC169375.4| Sorghum bicolor clone SB_BBc0020O07, complete seq... 42 2.0
13emb|Z49444.1|SCYJL169W S.cerevisiae chromosome X reading frame O... 42 2.0
14gb|AC140945.1| Gallus gallus BAC clone TAM33-20E22 from chromoso... 42 2.0
15gb|AC183678.2| Pan troglodytes BAC clone CH251-485O9 from chromo... 40 7.7
16ref|XM_955007.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.7
17ref|XM_325694.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.7
18gb|AC182813.8| Medicago truncatula clone mth2-69k1, complete seq... 40 7.7
19gb|AC099720.7| Mus musculus chromosome 10, clone RP23-415H15, co... 40 7.7
20gb|AC146760.13| Medicago truncatula clone mth2-174d3, complete s... 40 7.7
21gb|AC158752.5| Mus musculus chromosome 15, clone RP24-132H17, co... 40 7.7
22gb|AC011448.5| Homo sapiens chromosome 19 clone CTC-260F20, comp... 40 7.7
23gb|AC092945.6| Homo sapiens 12 BAC RP11-290O5 (Roswell Park Canc... 40 7.7
24gb|AC153121.15| Medicago truncatula clone mth2-80o14, complete s... 40 7.7
25gb|AC092067.2| Homo sapiens chromosome 19 clone CTB-184G21, comp... 40 7.7
26gb|AC160407.6| Mus musculus 10 BAC RP24-445P5 (Roswell Park Canc... 40 7.7
27dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
28dbj|AP003571.4| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
29dbj|AB006698.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 7.7
30gb|AC154777.2| Mus musculus BAC clone RP24-459H24 from 14, compl... 40 7.7
31emb|AL845257.2| Mouse DNA sequence from clone RP23-280K4 on chro... 40 7.7
32dbj|AP000547.1| Homo sapiens genomic DNA, chromosome 22q11.2, Ca... 40 7.7 
>ref|XM_480372.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1980

 Score =  613 bits (309), Expect = e-172
 Identities = 504/569 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcaaccccaactgtgaagcaaaagtgactgctgtggatggtcaataccagattggagtct 60
           ||||||| ||||||||||||||||| || |||||||||||||| || ||||||||| | |
Sbjct: 268 gcaaccctaactgtgaagcaaaagtaacggctgtggatggtcattatcagattggaattt 327

                                                                       
Query: 61  acactgttaggccgattgcagaaggcgaggaaatcacttttgattacaactctgtaactg 120
           |||||||| | || ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 328 acactgttcgaccaattgcagaaggcgaggaaatcacttttgattacaactctgttactg 387

                                                                       
Query: 121 agagtaaggaagagcatgaagcatcggtttgcctctgtggaagtcaagtatgccggggca 180
           ||||||| |||||||| ||||| || ||||| ||||||||||||||| ||||| ||||||
Sbjct: 388 agagtaaagaagagcacgaagcgtcagtttgtctctgtggaagtcaaatatgcaggggca 447

                                                                       
Query: 181 gctatttaaatttttctggagagggagctttcgagaaggtgttaatggaattccacggtg 240
           ||||||||||||||||||| || |||||||| || ||||| || ||||||||||| ||||
Sbjct: 448 gctatttaaatttttctggggaaggagcttttgaaaaggtcttgatggaattccatggtg 507

                                                                       
Query: 241 tgcttgaccgacacagtttgctgctacaggcttgcgaagcaaacactgtctcccaacaag 300
           |||| || ||||| ||| | ||| |||||||||| ||||||||| |||| || |||||||
Sbjct: 508 tgctcgatcgacatagtcttctgttacaggcttgtgaagcaaactctgtttctcaacaag 567

                                                                       
Query: 301 acttgattgacttgggtagagctggtcttggtacctgtttgcttgctggtttgcctggct 360
           |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 568 acttaattgacttggggagagctggtcttggtacctgtttgcttgctggtttgcctggat 627

                                                                       
Query: 361 ggcttgttgcttacacagcccacctggtgcggtttatattcttcgagaggcagaaacttc 420
           |||||||||||||||| || ||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 628 ggcttgttgcttacactgctcacctggtgcggtttatattctttgagagacagaaacttc 687

                                                                       
Query: 421 ctaatgagatcttcaagcacaacatggaagagaagcggcagttttttacagatattagta 480
           || |||||||||| || |||||  |||| |||||||| |||||||| |||||||| |  |
Sbjct: 688 ctcatgagatctttaaacacaatgtggacgagaagcgccagtttttcacagatataaaca 747

                                                                       
Query: 481 tggattccgagaggaatgatgctgaagttcaggctgagggtgtattaaattctagattac 540
           |||||||||||| ||||||||| || |||||||| ||||| ||  | ||||| |||||||
Sbjct: 748 tggattccgagaagaatgatgccgaggttcaggccgagggagttctgaattcaagattac 807

                                        
Query: 541 agcatttaactcatacacttgataaggta 569
           || |||| |||||||||||||| ||||||
Sbjct: 808 agaatttgactcatacacttgacaaggta 836
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>dbj|AK121489.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150L05, full
           insert sequence
          Length = 1980

 Score =  613 bits (309), Expect = e-172
 Identities = 504/569 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcaaccccaactgtgaagcaaaagtgactgctgtggatggtcaataccagattggagtct 60
           ||||||| ||||||||||||||||| || |||||||||||||| || ||||||||| | |
Sbjct: 268 gcaaccctaactgtgaagcaaaagtaacggctgtggatggtcattatcagattggaattt 327

                                                                       
Query: 61  acactgttaggccgattgcagaaggcgaggaaatcacttttgattacaactctgtaactg 120
           |||||||| | || ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 328 acactgttcgaccaattgcagaaggcgaggaaatcacttttgattacaactctgttactg 387

                                                                       
Query: 121 agagtaaggaagagcatgaagcatcggtttgcctctgtggaagtcaagtatgccggggca 180
           ||||||| |||||||| ||||| || ||||| ||||||||||||||| ||||| ||||||
Sbjct: 388 agagtaaagaagagcacgaagcgtcagtttgtctctgtggaagtcaaatatgcaggggca 447

                                                                       
Query: 181 gctatttaaatttttctggagagggagctttcgagaaggtgttaatggaattccacggtg 240
           ||||||||||||||||||| || |||||||| || ||||| || ||||||||||| ||||
Sbjct: 448 gctatttaaatttttctggggaaggagcttttgaaaaggtcttgatggaattccatggtg 507

                                                                       
Query: 241 tgcttgaccgacacagtttgctgctacaggcttgcgaagcaaacactgtctcccaacaag 300
           |||| || ||||| ||| | ||| |||||||||| ||||||||| |||| || |||||||
Sbjct: 508 tgctcgatcgacatagtcttctgttacaggcttgtgaagcaaactctgtttctcaacaag 567

                                                                       
Query: 301 acttgattgacttgggtagagctggtcttggtacctgtttgcttgctggtttgcctggct 360
           |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 568 acttaattgacttggggagagctggtcttggtacctgtttgcttgctggtttgcctggat 627

                                                                       
Query: 361 ggcttgttgcttacacagcccacctggtgcggtttatattcttcgagaggcagaaacttc 420
           |||||||||||||||| || ||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 628 ggcttgttgcttacactgctcacctggtgcggtttatattctttgagagacagaaacttc 687

                                                                       
Query: 421 ctaatgagatcttcaagcacaacatggaagagaagcggcagttttttacagatattagta 480
           || |||||||||| || |||||  |||| |||||||| |||||||| |||||||| |  |
Sbjct: 688 ctcatgagatctttaaacacaatgtggacgagaagcgccagtttttcacagatataaaca 747

                                                                       
Query: 481 tggattccgagaggaatgatgctgaagttcaggctgagggtgtattaaattctagattac 540
           |||||||||||| ||||||||| || |||||||| ||||| ||  | ||||| |||||||
Sbjct: 748 tggattccgagaagaatgatgccgaggttcaggccgagggagttctgaattcaagattac 807

                                        
Query: 541 agcatttaactcatacacttgataaggta 569
           || |||| |||||||||||||| ||||||
Sbjct: 808 agaatttgactcatacacttgacaaggta 836
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  198 bits (100), Expect = 1e-47
 Identities = 148/164 (90%)
 Strand = Plus / Plus

                                                                           
Query: 225     atggaattccacggtgtgcttgaccgacacagtttgctgctacaggcttgcgaagcaaac 284
               ||||||||||| |||||||| || ||||| ||| | ||| |||||||||| |||||||||
Sbjct: 4688112 atggaattccatggtgtgctcgatcgacatagtcttctgttacaggcttgtgaagcaaac 4688171

                                                                           
Query: 285     actgtctcccaacaagacttgattgacttgggtagagctggtcttggtacctgtttgctt 344
                |||| || ||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 4688172 tctgtttctcaacaagacttaattgacttggggagagctggtcttggtacctgtttgctt 4688231

                                                           
Query: 345     gctggtttgcctggctggcttgttgcttacacagcccacctggt 388
               |||||||||||||| ||||||||||||||||| || ||||||||
Sbjct: 4688232 gctggtttgcctggatggcttgttgcttacactgctcacctggt 4688275



 Score =  127 bits (64), Expect = 4e-26
 Identities = 112/128 (87%)
 Strand = Plus / Plus

                                                                           
Query: 386     ggtgcggtttatattcttcgagaggcagaaacttcctaatgagatcttcaagcacaacat 445
               |||||||||||||||||| ||||| |||||||||||| |||||||||| || |||||  |
Sbjct: 4688366 ggtgcggtttatattctttgagagacagaaacttcctcatgagatctttaaacacaatgt 4688425

                                                                           
Query: 446     ggaagagaagcggcagttttttacagatattagtatggattccgagaggaatgatgctga 505
               ||| |||||||| |||||||| |||||||| |  ||||||||||||| ||||||||| ||
Sbjct: 4688426 ggacgagaagcgccagtttttcacagatataaacatggattccgagaagaatgatgccga 4688485

                       
Query: 506     agttcagg 513
                |||||||
Sbjct: 4688486 ggttcagg 4688493



 Score =  121 bits (61), Expect = 3e-24
 Identities = 85/93 (91%)
 Strand = Plus / Plus

                                                                           
Query: 30      gctgtggatggtcaataccagattggagtctacactgttaggccgattgcagaaggcgag 89
               |||||||||||||| || ||||||||| | ||||||||| | || |||||||||||||||
Sbjct: 4687721 gctgtggatggtcattatcagattggaatttacactgttcgaccaattgcagaaggcgag 4687780

                                                
Query: 90      gaaatcacttttgattacaactctgtaactgag 122
               |||||||||||||||||||||||||| ||||||
Sbjct: 4687781 gaaatcacttttgattacaactctgttactgag 4687813



 Score =  111 bits (56), Expect = 3e-21
 Identities = 89/100 (89%)
 Strand = Plus / Plus

                                                                           
Query: 121     agagtaaggaagagcatgaagcatcggtttgcctctgtggaagtcaagtatgccggggca 180
               ||||||| |||||||| ||||| || ||||| ||||||||||||||| ||||| ||||||
Sbjct: 4687889 agagtaaagaagagcacgaagcgtcagtttgtctctgtggaagtcaaatatgcaggggca 4687948

                                                       
Query: 181     gctatttaaatttttctggagagggagctttcgagaaggt 220
               ||||||||||||||||||| || |||||||| || |||||
Sbjct: 4687949 gctatttaaatttttctggggaaggagcttttgaaaaggt 4687988



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                        
Query: 528     aattctagattacagcatttaactcatacacttgataaggt 568
               ||||| ||||||||| |||| |||||||||||||| |||||
Sbjct: 4688581 aattcaagattacagaatttgactcatacacttgacaaggt 4688621
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>dbj|AP004692.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0455A11
          Length = 158629

 Score =  198 bits (100), Expect = 1e-47
 Identities = 148/164 (90%)
 Strand = Plus / Plus

                                                                         
Query: 225   atggaattccacggtgtgcttgaccgacacagtttgctgctacaggcttgcgaagcaaac 284
             ||||||||||| |||||||| || ||||| ||| | ||| |||||||||| |||||||||
Sbjct: 46128 atggaattccatggtgtgctcgatcgacatagtcttctgttacaggcttgtgaagcaaac 46187

                                                                         
Query: 285   actgtctcccaacaagacttgattgacttgggtagagctggtcttggtacctgtttgctt 344
              |||| || ||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 46188 tctgtttctcaacaagacttaattgacttggggagagctggtcttggtacctgtttgctt 46247

                                                         
Query: 345   gctggtttgcctggctggcttgttgcttacacagcccacctggt 388
             |||||||||||||| ||||||||||||||||| || ||||||||
Sbjct: 46248 gctggtttgcctggatggcttgttgcttacactgctcacctggt 46291



 Score =  127 bits (64), Expect = 4e-26
 Identities = 112/128 (87%)
 Strand = Plus / Plus

                                                                         
Query: 386   ggtgcggtttatattcttcgagaggcagaaacttcctaatgagatcttcaagcacaacat 445
             |||||||||||||||||| ||||| |||||||||||| |||||||||| || |||||  |
Sbjct: 46382 ggtgcggtttatattctttgagagacagaaacttcctcatgagatctttaaacacaatgt 46441

                                                                         
Query: 446   ggaagagaagcggcagttttttacagatattagtatggattccgagaggaatgatgctga 505
             ||| |||||||| |||||||| |||||||| |  ||||||||||||| ||||||||| ||
Sbjct: 46442 ggacgagaagcgccagtttttcacagatataaacatggattccgagaagaatgatgccga 46501

                     
Query: 506   agttcagg 513
              |||||||
Sbjct: 46502 ggttcagg 46509



 Score =  121 bits (61), Expect = 3e-24
 Identities = 85/93 (91%)
 Strand = Plus / Plus

                                                                         
Query: 30    gctgtggatggtcaataccagattggagtctacactgttaggccgattgcagaaggcgag 89
             |||||||||||||| || ||||||||| | ||||||||| | || |||||||||||||||
Sbjct: 45737 gctgtggatggtcattatcagattggaatttacactgttcgaccaattgcagaaggcgag 45796

                                              
Query: 90    gaaatcacttttgattacaactctgtaactgag 122
             |||||||||||||||||||||||||| ||||||
Sbjct: 45797 gaaatcacttttgattacaactctgttactgag 45829



 Score =  111 bits (56), Expect = 3e-21
 Identities = 89/100 (89%)
 Strand = Plus / Plus

                                                                         
Query: 121   agagtaaggaagagcatgaagcatcggtttgcctctgtggaagtcaagtatgccggggca 180
             ||||||| |||||||| ||||| || ||||| ||||||||||||||| ||||| ||||||
Sbjct: 45905 agagtaaagaagagcacgaagcgtcagtttgtctctgtggaagtcaaatatgcaggggca 45964

                                                     
Query: 181   gctatttaaatttttctggagagggagctttcgagaaggt 220
             ||||||||||||||||||| || |||||||| || |||||
Sbjct: 45965 gctatttaaatttttctggggaaggagcttttgaaaaggt 46004



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                      
Query: 528   aattctagattacagcatttaactcatacacttgataaggt 568
             ||||| ||||||||| |||| |||||||||||||| |||||
Sbjct: 46597 aattcaagattacagaatttgactcatacacttgacaaggt 46637
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>ref|NM_117606.3| Arabidopsis thaliana unknown protein AT4G15180 mRNA, complete cds
          Length = 7390

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 86/101 (85%)
 Strand = Plus / Plus

                                                                        
Query: 84   ggcgaggaaatcacttttgattacaactctgtaactgagagtaaggaagagcatgaagca 143
            |||||||| || ||||| ||||| || |||||||||||||||||||||||  ||||||| 
Sbjct: 5659 ggcgaggagataactttcgattataattctgtaactgagagtaaggaagaatatgaagcg 5718

                                                     
Query: 144  tcggtttgcctctgtggaagtcaagtatgccggggcagcta 184
            || |||||| | ||||| || |||||||| || ||||||||
Sbjct: 5719 tctgtttgcttgtgtggtagccaagtatgtcgaggcagcta 5759



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 497  tgatgctgaagttcaggctgagggtgt 523
            ||||||||| |||||||||||||||||
Sbjct: 6072 tgatgctgaggttcaggctgagggtgt 6098
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>gb|AY103869.1| Zea mays PCO114486 mRNA sequence
          Length = 1282

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                       
Query: 480 atggattccgagaggaatgatgctgaagttcaggctgagggtgtattaaattctagatta 539
           |||||||| |||| |||||||||||| |||||||| ||||| ||||||||||| ||||||
Sbjct: 30  atggattctgagaagaatgatgctgaggttcaggcagagggagtattaaattcaagatta 89

             
Query: 540 ca 541
           ||
Sbjct: 90  ca 91
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>gb|AC145218.29| Medicago truncatula clone mth2-34l18, complete sequence
          Length = 134519

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                    
Query: 129 gaagagcatgaagcatcggtttgcctctgtggaagtcaagtatgccggggcagctat 185
           |||||| | |||||||| ||||| || |||||||| ||||||||||| || ||||||
Sbjct: 292 gaagagtacgaagcatcagtttgtctgtgtggaagccaagtatgccgaggaagctat 236
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>emb|Z97338.2|ATFCA3 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 3
          Length = 200252

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                         
Query: 121   agagtaaggaagagcatgaagcatcggtttgcctctgtggaagtcaagtatgccggggca 180
             |||||||||||||  ||||||| || |||||| | ||||| || |||||||| || ||||
Sbjct: 24696 agagtaaggaagaatatgaagcgtctgtttgcttgtgtggtagccaagtatgtcgaggca 24755

                 
Query: 181   gcta 184
             ||||
Sbjct: 24756 gcta 24759
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>emb|AL161540.2|ATCHRIV40 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 40
          Length = 197405

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                          
Query: 121    agagtaaggaagagcatgaagcatcggtttgcctctgtggaagtcaagtatgccggggca 180
              |||||||||||||  ||||||| || |||||| | ||||| || |||||||| || ||||
Sbjct: 170578 agagtaaggaagaatatgaagcgtctgtttgcttgtgtggtagccaagtatgtcgaggca 170637

                  
Query: 181    gcta 184
              ||||
Sbjct: 170638 gcta 170641
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>emb|AL513190.13| Human DNA sequence from clone RP11-12J10 on chromosome 10 Contains the 3'
              end of the LHPP gene for phospholysine phosphohistidine
              inorganic pyrophosphate phosphatase, the 3' end of gene
              KIAA0140 (FLJ13019) and a CpG island, complete sequence
          Length = 120770

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 182    ctatttaaatttttctggaga 202
              |||||||||||||||||||||
Sbjct: 114754 ctatttaaatttttctggaga 114774
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>gb|AC083801.20| Homo sapiens 3 BAC RP11-646E18 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 159621

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 99    tttgattacaactctgtaact 119
             |||||||||||||||||||||
Sbjct: 52670 tttgattacaactctgtaact 52650
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>gb|AC169375.4| Sorghum bicolor clone SB_BBc0020O07, complete sequence
          Length = 117931

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 344   tgctggtttgcctggctggcttgttgcttacac 376
             |||||||||| |||  |||||||||||||||||
Sbjct: 32148 tgctggtttgactgcatggcttgttgcttacac 32180
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>emb|Z49444.1|SCYJL169W S.cerevisiae chromosome X reading frame ORF YJL169w
          Length = 3311

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 82   aaggcgaggaaatcacttttgatta 106
            |||| ||||||||||||||||||||
Sbjct: 2044 aaggtgaggaaatcacttttgatta 2020
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>gb|AC140945.1| Gallus gallus BAC clone TAM33-20E22 from chromosome ul, complete
             sequence
          Length = 143278

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 344   tgctggtttgcctggctggct 364
             |||||||||||||||||||||
Sbjct: 31446 tgctggtttgcctggctggct 31466
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>gb|AC183678.2| Pan troglodytes BAC clone CH251-485O9 from chromosome 22, complete
              sequence
          Length = 209755

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 345    gctggtttgcctggctggct 364
              ||||||||||||||||||||
Sbjct: 124547 gctggtttgcctggctggct 124528
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>ref|XM_955007.1| Neurospora crassa OR74A hypothetical protein (NCU05840.1) partial
            mRNA
          Length = 2022

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 199  gagagggagctttcgagaag 218
            ||||||||||||||||||||
Sbjct: 1102 gagagggagctttcgagaag 1121
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>ref|XM_325694.1| Neurospora crassa OR74A hypothetical protein (NCU05840.1) partial
            mRNA
          Length = 2022

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 199  gagagggagctttcgagaag 218
            ||||||||||||||||||||
Sbjct: 1102 gagagggagctttcgagaag 1121
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>gb|AC182813.8| Medicago truncatula clone mth2-69k1, complete sequence
          Length = 131049

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 18    gcaaaagtgactgctgtgga 37
             ||||||||||||||||||||
Sbjct: 11397 gcaaaagtgactgctgtgga 11416
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>gb|AC099720.7| Mus musculus chromosome 10, clone RP23-415H15, complete sequence
          Length = 212928

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 181  gctatttaaatttttctggagagg 204
            ||||||||||| ||||||||||||
Sbjct: 9979 gctatttaaatatttctggagagg 9956
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>gb|AC146760.13| Medicago truncatula clone mth2-174d3, complete sequence
          Length = 122316

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 96     acttttgattacaactctgt 115
              ||||||||||||||||||||
Sbjct: 103408 acttttgattacaactctgt 103389
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>gb|AC158752.5| Mus musculus chromosome 15, clone RP24-132H17, complete sequence
          Length = 159194

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 314   gggtagagctggtcttggta 333
             ||||||||||||||||||||
Sbjct: 60761 gggtagagctggtcttggta 60780
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>gb|AC011448.5| Homo sapiens chromosome 19 clone CTC-260F20, complete sequence
          Length = 165122

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 26   gactgctgtggatggtcaatacca 49
            ||||||||||||||| ||||||||
Sbjct: 6343 gactgctgtggatgggcaatacca 6320
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>gb|AC092945.6| Homo sapiens 12 BAC RP11-290O5 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 146969

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 14     tgaagcaaaagtgactgctg 33
              ||||||||||||||||||||
Sbjct: 108629 tgaagcaaaagtgactgctg 108610
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>gb|AC153121.15| Medicago truncatula clone mth2-80o14, complete sequence
          Length = 115074

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 18     gcaaaagtgactgctgtgga 37
              ||||||||||||||||||||
Sbjct: 102802 gcaaaagtgactgctgtgga 102821
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>gb|AC092067.2| Homo sapiens chromosome 19 clone CTB-184G21, complete sequence
          Length = 61958

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 26    gactgctgtggatggtcaatacca 49
             ||||||||||||||| ||||||||
Sbjct: 59094 gactgctgtggatgggcaatacca 59071
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>gb|AC160407.6| Mus musculus 10 BAC RP24-445P5 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 186970

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 181   gctatttaaatttttctggagagg 204
             ||||||||||| ||||||||||||
Sbjct: 72748 gctatttaaatatttctggagagg 72771
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 182      ctatttaaatttttctggag 201
                ||||||||||||||||||||
Sbjct: 25676552 ctatttaaatttttctggag 25676571
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>dbj|AP003571.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0458E02
          Length = 154458

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 182    ctatttaaatttttctggag 201
              ||||||||||||||||||||
Sbjct: 99997  ctatttaaatttttctggag 100016
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>dbj|AB006698.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCL19
          Length = 84510

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 521   tgtattaaattctagattacagcatttaactc 552
             |||||| |||||||||||| ||||| ||||||
Sbjct: 12386 tgtatttaattctagattaaagcatataactc 12417
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>gb|AC154777.2| Mus musculus BAC clone RP24-459H24 from 14, complete sequence
          Length = 155730

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 70     ggccgattgcagaaggcgaggaaa 93
              ||||||||||||||||| ||||||
Sbjct: 125592 ggccgattgcagaaggcaaggaaa 125615
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>emb|AL845257.2| Mouse DNA sequence from clone RP23-280K4 on chromosome 2, complete
             sequence
          Length = 169281

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 264   ctacaggcttgcgaagcaaacact 287
             |||||||||||| |||||||||||
Sbjct: 74204 ctacaggcttgcaaagcaaacact 74181
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>dbj|AP000547.1| Homo sapiens genomic DNA, chromosome 22q11.2, Cat Eye Syndrome region,
             clone:KB67B5
          Length = 123288

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 345   gctggtttgcctggctggct 364
             ||||||||||||||||||||
Sbjct: 80692 gctggtttgcctggctggct 80673


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,484,904
Number of Sequences: 3902068
Number of extensions: 5484904
Number of successful extensions: 96174
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 96012
Number of HSP's gapped (non-prelim): 162
length of query: 569
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 546
effective length of database: 17,143,297,704
effective search space: 9360240546384
effective search space used: 9360240546384
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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