ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | basd26l14 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_482427.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1164 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 116 gaagccggcgaggggcgggaagaggag 142 ||||||||||||||| ||||||||||| Sbjct: 723 gaagccggcgaggggagggaagaggag 697
>emb|AL137072.8| Human DNA sequence from clone RP11-29B11 on chromosome 9 Contains the 5' end of the TXNDC4 gene for thioredoxin domain containing 4 (endoplasmic reticulum) (ERP44, ERp44,KIAA0573), the 5' end of the INVS gene for inversin, a ribosomal protein S2 (RPS2) pseudogene, a novel pseudogene and two CpG islands, complete sequence Length = 172830 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ctctccatctcatcattttcctt 47 ||||||||||||||||||||||| Sbjct: 87492 ctctccatctcatcattttcctt 87470
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 116 gaagccggcgaggggcgggaagaggag 142 ||||||||||||||| ||||||||||| Sbjct: 20024208 gaagccggcgaggggagggaagaggag 20024182
>gb|AY946510.1| Oryza sativa microRNA MIR435f precursor, gene, partial sequence Length = 267 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 116 gaagccggcgaggggcgggaagaggag 142 ||||||||||||||| ||||||||||| Sbjct: 31 gaagccggcgaggggagggaagaggag 5
>dbj|AP005521.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0477F03 Length = 176120 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 116 gaagccggcgaggggcgggaagaggag 142 ||||||||||||||| ||||||||||| Sbjct: 96059 gaagccggcgaggggagggaagaggag 96033
>gb|AC157944.2| Mus musculus BAC clone RP23-456N8 from chromosome 15, complete sequence Length = 179092 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 176 ggagaagaaggagtcggagaaggagaggaggaag 209 ||||||||||||| ||||||| ||||||||||| Sbjct: 78072 ggagaagaaggaggaggagaagaagaggaggaag 78105
>gb|AC124522.4| Mus musculus BAC clone RP23-397A19 from chromosome 10, complete sequence Length = 196485 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 176 ggagaagaaggagtcggagaaggagaggaggaag 209 ||||||||||||| |||||||||||||| |||| Sbjct: 124166 ggagaagaaggagaaggagaaggagaggaagaag 124199
>gb|AC115356.5| Mus musculus BAC clone RP23-47E9 from 15, complete sequence Length = 212177 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 176 ggagaagaaggagtcggagaaggagaggaggaag 209 ||||||||||||| ||||||| ||||||||||| Sbjct: 204550 ggagaagaaggaggaggagaagaagaggaggaag 204583
>ref|NM_001007727.1| Rattus norvegicus Ly6/Plaur domain containing 1 (Lypd1), mRNA Length = 2038 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 178 agaagaaggagtcggagaaggagaggagga 207 ||||||||| ||||||||||| |||||||| Sbjct: 1536 agaagaaggtgtcggagaaggggaggagga 1565
>ref|XM_784268.1| PREDICTED: Strongylocentrotus purpuratus similar to ankyrin repeat domain 26 (LOC584408), mRNA Length = 7137 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 190 cggagaaggagaggaggaagcgcatg 215 |||||||||||||||||||| ||||| Sbjct: 920 cggagaaggagaggaggaagggcatg 945
>gb|AC165428.1| Strongylocentrotus purpuratus BAC clone contig containing Eve, the hox cluster, cholinesterase, and COLP5alpha genes, complete sequence Length = 796348 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 176 ggagaagaaggagtcggagaaggagaggaggaag 209 ||||||||||||| | ||||||||||||||||| Sbjct: 491419 ggagaagaaggaggagaagaaggagaggaggaag 491452
>gb|AC092954.4| Homo sapiens 3 BAC RP11-368I23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 166452 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 176 ggagaagaaggagtcggagaaggagaggaggaag 209 ||||||||||||| |||||||||||| |||||| Sbjct: 141843 ggagaagaaggaggaggagaaggagagtaggaag 141876
>gb|AC100782.2| Homo sapiens, clone RP11-300E4, complete sequence Length = 185123 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 36 atcattttccttgcttgtgaag 57 |||||||||||||||||||||| Sbjct: 64211 atcattttccttgcttgtgaag 64232
>gb|AC113484.14| Mus musculus chromosome 8, clone RP23-343H23, complete sequence Length = 176303 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 176 ggagaagaaggagtcggagaaggagaggaggaag 209 ||||||||||||| |||||||||| |||||||| Sbjct: 102139 ggagaagaaggaggaggagaaggaggggaggaag 102172
>gb|AC010983.9| Homo sapiens BAC clone RP11-484E10 from 2, complete sequence Length = 189870 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 41 tttccttgcttgtgaagtctac 62 |||||||||||||||||||||| Sbjct: 102186 tttccttgcttgtgaagtctac 102207
>ref|XM_222578.2| PREDICTED: Rattus norvegicus G protein-coupled receptor 39 (predicted) (Gpr39_predicted), mRNA Length = 1371 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 178 agaagaaggagtcggagaaggagaggagga 207 ||||||||| ||||||||||| |||||||| Sbjct: 1000 agaagaaggtgtcggagaaggggaggagga 971
>emb|AL596088.14| Mouse DNA sequence from clone RP23-157O10 on chromosome 11, complete sequence Length = 233204 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 177 gagaagaaggagtcggagaaggagag 202 ||||||||||||||| |||||||||| Sbjct: 133668 gagaagaaggagtcgaagaaggagag 133693
>gb|BC082032.1| Rattus norvegicus Ly6/Plaur domain containing 1, mRNA (cDNA clone MGC:95169 IMAGE:7130639), complete cds Length = 2038 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 178 agaagaaggagtcggagaaggagaggagga 207 ||||||||| ||||||||||| |||||||| Sbjct: 1536 agaagaaggtgtcggagaaggggaggagga 1565
>gb|AC122005.3| Mus musculus chromosome 5 clone RP24-340B11, complete sequence Length = 183264 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/32 (93%), Gaps = 2/32 (6%) Strand = Plus / Plus Query: 176 ggagaagaaggagtcggagaaggagaggagga 207 ||||||||||||| ||||||||||||||||| Sbjct: 129721 ggagaagaaggag--ggagaaggagaggagga 129750
>gb|AC135918.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0115F21, complete sequence Length = 128493 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 213 atgaaggcgctctgcgagaag 233 ||||||||||||||||||||| Sbjct: 126129 atgaaggcgctctgcgagaag 126149
>gb|AC104280.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1430_B02, complete sequence Length = 75456 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 213 atgaaggcgctctgcgagaag 233 ||||||||||||||||||||| Sbjct: 749 atgaaggcgctctgcgagaag 769
>gb|AC138386.7| Mus musculus chromosome 1, clone RP24-433D10, complete sequence Length = 142114 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 126 aggggcgggaagaggagcagg 146 ||||||||||||||||||||| Sbjct: 53808 aggggcgggaagaggagcagg 53788
>gb|AC147079.4| Pan troglodytes BAC clone RP43-184E24 from 7, complete sequence Length = 218644 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 176 ggagaagaaggagtcggagaaggagagga 204 ||||||||||||| |||||||||||||| Sbjct: 89573 ggagaagaaggagaaggagaaggagagga 89545
>ref|XM_656520.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4008.2), mRNA Length = 1212 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 actggtccttcgtcctctcca 31 ||||||||||||||||||||| Sbjct: 1120 actggtccttcgtcctctcca 1100
>ref|XM_543741.2| PREDICTED: Canis familiaris similar to FYVE, RhoGEF and PH domain containing 4 (LOC486615), mRNA Length = 2917 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 cggagaaggagaggaggaagc 210 ||||||||||||||||||||| Sbjct: 798 cggagaaggagaggaggaagc 818
>ref|XM_381997.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01821.1) partial mRNA Length = 2454 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 gcgggaagaggagcagggaga 150 ||||||||||||||||||||| Sbjct: 2373 gcgggaagaggagcagggaga 2393
>emb|AL157832.14| Human DNA sequence from clone RP11-109A6 on chromosome 10 Contains the 3' end of the MGMT gene for O-6-methylguanine-DNA methyltransferase and three novel genes, complete sequence Length = 130192 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 130 gcgggaagaggagcagggagagcgg 154 ||||||||||||| ||||||||||| Sbjct: 88183 gcgggaagaggagaagggagagcgg 88159
>gb|AE012504.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 412 of 460 of the complete genome Length = 12849 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 100 tggagccggtgaaggcgaagccggc 124 |||||||||||||||||| |||||| Sbjct: 7528 tggagccggtgaaggcgacgccggc 7504
>gb|AC154351.2| Mus musculus BAC clone RP24-536C5 from chromosome 17, complete sequence Length = 188013 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 417 cccactaccaccactaccacg 437 ||||||||||||||||||||| Sbjct: 26418 cccactaccaccactaccacg 26438
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 100 tggagccggtgaaggcgaagccggc 124 |||||||||||||||||| |||||| Sbjct: 4613210 tggagccggtgaaggcgacgccggc 4613186
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 213 atgaaggcgctctgcgagaag 233 ||||||||||||||||||||| Sbjct: 6562695 atgaaggcgctctgcgagaag 6562715
>gb|AC146149.2| Pan troglodytes BAC clone RP43-37G13 from chromosome 7, complete sequence Length = 197136 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 176 ggagaagaaggagtcggagaaggagagga 204 ||||||||||||| |||||||||||||| Sbjct: 50071 ggagaagaaggagaaggagaaggagagga 50043
>gb|AC134324.3| Mus musculus BAC clone RP24-532P18 from 9, complete sequence Length = 176054 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 181 agaaggagtcggagaaggagaggaggaag 209 |||||||| ||||||||||||||||||| Sbjct: 120103 agaaggagaaggagaaggagaggaggaag 120075
>gb|AC145975.3| Gallus gallus BAC clone CH261-4H14 from chromosome unknown, complete sequence Length = 185379 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 178 agaagaaggagtcggagaaggagaggaggaagc 210 ||||||||||| ||||||||||| |||||||| Sbjct: 13214 agaagaaggagaaggagaaggagaagaggaagc 13246
>emb|AJ519337.1|HSA519337 Homo sapiens partial mRNA for IgM immunoglobulin heavy chain variable region (IGHV gene), clone LIBPM331 Length = 375 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 421 ctaccaccactaccacgaaaa 441 ||||||||||||||||||||| Sbjct: 200 ctaccaccactaccacgaaaa 180
>emb|AJ519278.1|HSA519278 Homo sapiens partial mRNA for IgG2 immunoglobulin heavy chain variable region (IGHV gene), clone ANBPG288 Length = 375 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 421 ctaccaccactaccacgaaaa 441 ||||||||||||||||||||| Sbjct: 200 ctaccaccactaccacgaaaa 180
>gb|AC168222.2| Mus musculus BAC clone CH25-395E5 from chromosome 10, complete sequence Length = 96290 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 178 agaagaaggagtcggagaaggagaggaggaag 209 ||||||||||| ||||||||||| ||||||| Sbjct: 48872 agaagaaggagaaggagaaggagaagaggaag 48903
>gb|AC162528.5| Mus musculus BAC clone RP23-4P1 from chromosome 5, complete sequence Length = 219218 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 176 ggagaagaaggagtcggagaaggagagg 203 ||||||||||||| ||||||||||||| Sbjct: 60680 ggagaagaaggagagggagaaggagagg 60707
>ref|XM_464668.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2644 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 ggagtcggagaaggagagga 204 |||||||||||||||||||| Sbjct: 77 ggagtcggagaaggagagga 58
>ref|NM_018798.2| Mus musculus ubiquilin 2 (Ubqln2), mRNA Length = 3343 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 cggcggtggtgctgctggag 179 |||||||||||||||||||| Sbjct: 1315 cggcggtggtgctgctggag 1296
>gb|BC077461.1| Xenopus laevis MGC82441 protein, mRNA (cDNA clone MGC:82441 IMAGE:4683814), complete cds Length = 2969 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 ggtgctgctggagaagaagg 186 |||||||||||||||||||| Sbjct: 1335 ggtgctgctggagaagaagg 1354
>gb|AY648726.1| Danio rerio AD24 mRNA, complete cds Length = 2585 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 atatcaagaagctgaaggag 338 |||||||||||||||||||| Sbjct: 805 atatcaagaagctgaaggag 824
>ref|XM_359850.1| Magnaporthe grisea 70-15 hypothetical protein (MG04927.4) partial mRNA Length = 1491 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 164 ggtggtgctgctggagaagaagga 187 ||||||||||||| |||||||||| Sbjct: 567 ggtggtgctgctgaagaagaagga 544
>ref|XM_360451.1| Magnaporthe grisea 70-15 hypothetical protein (MG10763.4) partial mRNA Length = 357 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 418 ccactaccaccactaccacg 437 |||||||||||||||||||| Sbjct: 14 ccactaccaccactaccacg 33
>ref|XM_427045.1| PREDICTED: Gallus gallus similar to epiplakin (LOC429489), partial mRNA Length = 5224 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 156 ggcacggcggtggtgctgctggag 179 ||||||||| |||||||||||||| Sbjct: 3357 ggcacggcgctggtgctgctggag 3380
>ref|XM_421271.1| PREDICTED: Gallus gallus similar to FLJ00353 protein (LOC423356), mRNA Length = 7209 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 cccactaccaccactaccac 436 |||||||||||||||||||| Sbjct: 3447 cccactaccaccactaccac 3466
>gb|AC124614.11| Mus musculus chromosome 10, clone RP24-417L12, complete sequence Length = 173306 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 176 ggagaagaaggagtcggagaaggagaggagga 207 ||||||||||||| | ||||||||||||||| Sbjct: 94669 ggagaagaaggaggagaagaaggagaggagga 94700
>gb|AC115301.7| Mus musculus BAC clone RP24-83E2 from chromosome 7, complete sequence Length = 175603 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 176 ggagaagaaggagtcggagaaggagagg 203 ||||||||||||| ||||||||||||| Sbjct: 74871 ggagaagaaggagaaggagaaggagagg 74844
>gb|BC053022.1| Mus musculus ubiquilin 2, mRNA (cDNA clone MGC:62228 IMAGE:5708544), complete cds Length = 3343 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 cggcggtggtgctgctggag 179 |||||||||||||||||||| Sbjct: 1315 cggcggtggtgctgctggag 1296
>gb|AC163269.3| Mus musculus chromosome 15, clone RP24-276M6, complete sequence Length = 172683 Score = 40.1 bits (20), Expect = 8.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 165 gtggtgctgctggagaagaaggagtcggagaaggag 200 |||||| || |||||||||||||| |||||||||| Sbjct: 171947 gtggtggtggtggagaagaaggaggaggagaaggag 171912
>gb|AY756174.4| Oryza rufipogon putative leucine-rich repeat receptor-like kinases and ternary complex factor MIP1-like genes, complete cds; retrotransposon putative membrane-associated protein and gag-pol precursor, pseudogenes, complete sequence; and unknown genes Length = 102522 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 tgctgctggagaagaaggag 188 |||||||||||||||||||| Sbjct: 57034 tgctgctggagaagaaggag 57015
>gb|BC078188.1| Danio rerio nucleolar complex associated 3 homolog (S. cerevisiae), mRNA (cDNA clone IMAGE:7139639), partial cds Length = 1580 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 atatcaagaagctgaaggag 338 |||||||||||||||||||| Sbjct: 798 atatcaagaagctgaaggag 817
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 cggcgaggggcgggaagagg 140 |||||||||||||||||||| Sbjct: 34846491 cggcgaggggcgggaagagg 34846472
>gb|AC073208.4| Homo sapiens BAC clone RP11-418B19 from 7, complete sequence Length = 71606 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 178 agaagaaggagtcggagaaggagaggaggaag 209 ||||||||||| |||| |||||||||||||| Sbjct: 35329 agaagaaggagaaggaggaggagaggaggaag 35298
>gb|AC092557.7| Oryza sativa chromosome 3 BAC OSJNBa0096I06 genomic sequence, complete sequence Length = 164352 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 cggcgaggggcgggaagagg 140 |||||||||||||||||||| Sbjct: 16159 cggcgaggggcgggaagagg 16178
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 151 gcggcggcacggcggtggtgctgctgga 178 |||||||||| |||| |||||||||||| Sbjct: 5000637 gcggcggcaccgcggcggtgctgctgga 5000610
>emb|CT009734.9| Mouse DNA sequence from clone RP23-182E3 on chromosome 14, complete sequence Length = 202398 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 aagaagctgaaggagagggt 343 |||||||||||||||||||| Sbjct: 124709 aagaagctgaaggagagggt 124728
>gb|AC132442.3| Mus musculus BAC clone RP23-240K23 from chromosome 10, complete sequence Length = 201145 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 aagaagctgaaggagagggt 343 |||||||||||||||||||| Sbjct: 170937 aagaagctgaaggagagggt 170918
>gb|AC122863.4| Mus musculus BAC clone RP23-142A14 from chromosome 7, complete sequence Length = 226601 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 176 ggagaagaaggagtcggagaaggagaggagga 207 ||||||||||||| | ||||||||||||||| Sbjct: 201287 ggagaagaaggagaagaagaaggagaggagga 201256
>gb|AC111096.15| Mus musculus chromosome 3, clone RP23-174B18, complete sequence Length = 209936 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 attcaagcatggaggtgaga 536 |||||||||||||||||||| Sbjct: 71953 attcaagcatggaggtgaga 71972
>gb|AC125114.3| Mus musculus BAC clone RP24-254M13 from chromosome 18, complete sequence Length = 158836 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 418 ccactaccaccactaccacgaaaa 441 ||||||||||||||||||| |||| Sbjct: 103840 ccactaccaccactaccaccaaaa 103817
>gb|AC126026.4| Mus musculus BAC clone RP24-486A17 from chromosome 18, complete sequence Length = 138242 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 418 ccactaccaccactaccacgaaaa 441 ||||||||||||||||||| |||| Sbjct: 39672 ccactaccaccactaccaccaaaa 39649
>gb|AC122537.4| Mus musculus BAC clone RP24-548A15 from chromosome 7, complete sequence Length = 195987 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 176 ggagaagaaggagtcggagaaggagaggagga 207 ||||||||||||| | ||||||||||||||| Sbjct: 35622 ggagaagaaggagaagaagaaggagaggagga 35591
>gb|AC122912.2| Mus musculus BAC clone RP23-61E5 from 7, complete sequence Length = 255062 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 178 agaagaaggagtcggagaaggagaggaggaag 209 |||||||| |||| |||||| ||||||||||| Sbjct: 165826 agaagaagcagtcagagaagaagaggaggaag 165795
>gb|AC122310.2| Mus musculus BAC clone RP23-296E17 from 12, complete sequence Length = 186217 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 cccactaccaccactaccac 436 |||||||||||||||||||| Sbjct: 51080 cccactaccaccactaccac 51061
>emb|CR674623.2|CNS0FJID Tetraodon nigroviridis full-length cDNA Length = 906 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 323 caagaagctgaaggagagggtcga 346 ||||||||||||||||||| |||| Sbjct: 609 caagaagctgaaggagaggatcga 632
>gb|AC099690.8| Mus musculus chromosome 8, clone RP23-73E9, complete sequence Length = 225655 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 178 agaagaaggagtcggagaaggagaggaggaag 209 ||||||||||| |||| |||||||||||||| Sbjct: 93637 agaagaaggaggaggaggaggagaggaggaag 93668
>gb|AC100382.22| Mus musculus chromosome 5, clone RP23-132D5, complete sequence Length = 190712 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 aagaagctgaaggagagggt 343 |||||||||||||||||||| Sbjct: 59862 aagaagctgaaggagagggt 59881
>gb|AC159647.2| Mus musculus BAC clone RP23-66A14 from chromosome 12, complete sequence Length = 213946 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 aagaagctgaaggagagggt 343 |||||||||||||||||||| Sbjct: 163699 aagaagctgaaggagagggt 163718
>gb|AC154334.2| Mus musculus BAC clone RP24-497L7 from chromosome 14, complete sequence Length = 127819 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 aagaagctgaaggagagggt 343 |||||||||||||||||||| Sbjct: 113382 aagaagctgaaggagagggt 113363
>gb|AE014075.1| Escherichia coli CFT073, complete genome Length = 5231428 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 159 acggcggtggtgctgctggagaagaagg 186 ||||||| | |||||||||||||||||| Sbjct: 1716513 acggcggagatgctgctggagaagaagg 1716540
>emb|Z95326.1|HS344F17 Human DNA sequence from clone RP3-344F17 on chromosome 6q22.1-22.33 Contains part of the gene for a novel protein similar to FLJ13018 and other hypothetical proteins, complete sequence Length = 85832 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 attttccttgcttgtgaagt 58 |||||||||||||||||||| Sbjct: 62927 attttccttgcttgtgaagt 62946
>emb|AL513366.11| Human DNA sequence from clone CTD-2522E6 on chromosome X Contains the RGN gene for regucalcin (senescence marker protein-30) (RC, SMP30), the gene for neuronal protein 17.3 (P17.3), the RBM10 gene for RNA binding motif protein 10 (MGC997, MGC1132, DXS8237E, KIAA0122), an inositol 1,3,4-triphosphate 5/6 kinase (ITPK1) pseudogene, the UBE1 gene for ubiquitin-activating enzyme E1 (A1S9T and BN75 temperature sensitivity complementing) (A1S9, A1ST, GXP1, A1S9T, UBE1X, MGC4781), the 5' UTR of the PCTK1 gene for PCTAIRE protein kinase 1 and five CpG islands, complete sequence Length = 145456 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 agaagaaggagtcggagaaggaga 201 ||||||||||| |||||||||||| Sbjct: 14017 agaagaaggagacggagaaggaga 14040
>emb|AL359767.13| Human DNA sequence from clone RP11-220O1 on chromosome 13 Contains the CCNA1 gene for cyclin A1 and a CpG island, complete sequence Length = 75314 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 178 agaagaaggagtcggagaaggagaggaggaag 209 ||||||||||| |||||||||||||| |||| Sbjct: 32033 agaagaaggagaaggagaaggagaggaagaag 32064
>emb|AL354732.30| Human DNA sequence from clone RP11-576I22 on chromosome 1 Contains a chromosome 14 open reading frame 94 (C14orf94) pseudogene and the 3' end of a novel gene, complete sequence Length = 139243 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 tggtgctgctggagaagaag 185 |||||||||||||||||||| Sbjct: 3071 tggtgctgctggagaagaag 3052
>gb|AC137988.2| Trypanosoma cruzi strain Brener chromosome 3 clone cosmids 1o17, 1m17, 1b21, 2n11, complete sequence Length = 105864 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 cccactaccaccactaccac 436 |||||||||||||||||||| Sbjct: 97886 cccactaccaccactaccac 97867
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 tggagccggtgaaggcgaag 119 |||||||||||||||||||| Sbjct: 3918145 tggagccggtgaaggcgaag 3918126
>emb|BX842629.1| Neurospora crassa DNA linkage group I BAC contig B20J13 Length = 126048 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 ggagaaggagaggaggaagc 210 |||||||||||||||||||| Sbjct: 93163 ggagaaggagaggaggaagc 93182
>gb|AC148836.6| Pan troglodytes BAC clone CH251-2C8 from chromosome 7, complete sequence Length = 219717 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 178 agaagaaggagtcggagaaggagaggaggaag 209 |||||||| || ||||||||||||||||||| Sbjct: 109301 agaagaagaagaaggagaaggagaggaggaag 109332
>emb|AL663049.8| Mouse DNA sequence from clone RP23-198N8 on chromosome 11 Contains the Mor2 gene for soluble malate dehydrogenase, a novel gene, a phosphoglycerate mutase (Pgam) pseudogene and a CpG island, complete sequence Length = 203295 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 aagaagctgaaggagagggt 343 |||||||||||||||||||| Sbjct: 112749 aagaagctgaaggagagggt 112730
>gb|AC018861.9| Homo sapiens chromosome 8, clone RP11-577N1, complete sequence Length = 187047 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 178 agaagaaggagtcggagaaggagaggaggaag 209 ||||||||||| ||||||||| ||||||||| Sbjct: 100837 agaagaaggagaaggagaaggaaaggaggaag 100806
>gb|AC165950.1| Mus musculus BAC clone RP24-235L20 from chromosome 13, complete sequence Length = 178927 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 tggtgctgctggagaagaag 185 |||||||||||||||||||| Sbjct: 146481 tggtgctgctggagaagaag 146462
>gb|AC008543.9| Homo sapiens chromosome 19 clone CTC-499B15, complete sequence Length = 231247 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 agaagaaggagtcggagaaggaga 201 ||||||||||| |||||||||||| Sbjct: 6275 agaagaaggagacggagaaggaga 6298
>gb|AC117432.4| Homo sapiens 3 BAC RP11-80F7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 152631 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 176 ggagaagaaggagtcggagaaggagaggagga 207 ||||||| ||||| ||||||||||||||||| Sbjct: 142505 ggagaaggaggaggaggagaaggagaggagga 142474
>ref|NM_136467.2| Drosophila melanogaster CG12042-RA (CG12042), mRNA Length = 1789 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 161 ggcggtggtgctgctggagaagaaggag 188 |||||||||||||| ||||||| ||||| Sbjct: 603 ggcggtggtgctgcaggagaagcaggag 630
>dbj|AK132539.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4831403K05 product:hypothetical protein, full insert sequence Length = 5957 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 418 ccactaccaccactaccacgaaaa 441 ||||||||||||||||||| |||| Sbjct: 2995 ccactaccaccactaccaccaaaa 3018
>gb|AC104527.2| Homo sapiens chromosome 19 clone CTD-2333A24, complete sequence Length = 46993 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 agaagaaggagtcggagaaggaga 201 ||||||||||| |||||||||||| Sbjct: 40812 agaagaaggagacggagaaggaga 40835
>gb|AY069420.1| Drosophila melanogaster LD13436 full length cDNA Length = 1800 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 161 ggcggtggtgctgctggagaagaaggag 188 |||||||||||||| ||||||| ||||| Sbjct: 603 ggcggtggtgctgcaggagaagcaggag 630
>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome Length = 2679306 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 325 agaagctgaaggagagggtcgatg 348 ||||||||||||||||||| |||| Sbjct: 698809 agaagctgaaggagagggtggatg 698832
>dbj|AK165268.1| Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched library, clone:F430006A13 product:SoxLZ/Sox6 leucine zipper binding protein in testis, full insert sequence Length = 3532 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 tggtgctgctggagaagaag 185 |||||||||||||||||||| Sbjct: 1218 tggtgctgctggagaagaag 1237
>gb|AC154503.3| Mus musculus BAC clone RP24-89J21 from chromosome 13, complete sequence Length = 176432 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 tggtgctgctggagaagaag 185 |||||||||||||||||||| Sbjct: 86402 tggtgctgctggagaagaag 86421
>gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold Length = 2136267 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 570 catgaggtgatcaccatcca 589 |||||||||||||||||||| Sbjct: 1866661 catgaggtgatcaccatcca 1866642
>gb|AC154725.3| Mus musculus BAC clone RP23-125L8 from chromosome 13, complete sequence Length = 204262 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 tggtgctgctggagaagaag 185 |||||||||||||||||||| Sbjct: 14419 tggtgctgctggagaagaag 14438
>gb|AC160131.2| Mus musculus BAC clone RP23-226D9 from chromosome 12, complete sequence Length = 202807 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 178 agaagaaggagtcggagaaggagaggaggaag 209 ||||||||||| ||||||||||| ||||||| Sbjct: 153545 agaagaaggagaaggagaaggagaagaggaag 153576
>gb|AC159639.2| Mus musculus BAC clone RP24-79M15 from chromosome 12, complete sequence Length = 220032 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 aagaagctgaaggagagggt 343 |||||||||||||||||||| Sbjct: 181123 aagaagctgaaggagagggt 181142
>gb|AC093046.1| Drosophila melanogaster, chromosome 2R, region 43D-43E, BAC clone BACR29D02, complete sequence Length = 158372 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 161 ggcggtggtgctgctggagaagaaggag 188 |||||||||||||| ||||||| ||||| Sbjct: 89097 ggcggtggtgctgcaggagaagcaggag 89070
>gb|AC150899.3| Mus musculus BAC clone RP23-179F8 from chromosome 10, complete sequence Length = 202346 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 176 ggagaagaaggagtcggagaaggagaggagga 207 ||||||||||||| | ||||||||||||||| Sbjct: 653 ggagaagaaggaggagaagaaggagaggagga 684
>dbj|AK028624.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732419F13 product:unclassifiable, full insert sequence Length = 2854 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 178 agaagaaggagtcggagaaggagaggaggaag 209 |||||||| |||| |||||| ||||||||||| Sbjct: 1942 agaagaagcagtcagagaagaagaggaggaag 1911
>gb|AC008259.4|AC008259 Drosophila melanogaster, chromosome 2R, region 43D-43D, BAC clone BACR04H12, complete sequence Length = 175285 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 161 ggcggtggtgctgctggagaagaaggag 188 |||||||||||||| ||||||| ||||| Sbjct: 161614 ggcggtggtgctgcaggagaagcaggag 161587
>dbj|AK076159.1| Mus musculus 14, 17 days embryo head cDNA, RIKEN full-length enriched library, clone:3200002H06 product:ubiquilin 2, full insert sequence Length = 3310 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 cggcggtggtgctgctggag 179 |||||||||||||||||||| Sbjct: 1319 cggcggtggtgctgctggag 1300
>gb|AC091420.1|AC091420 Mus musculus chromosome 11 clone MGS1-165L14, complete sequence Length = 125030 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 aagaagctgaaggagagggt 343 |||||||||||||||||||| Sbjct: 4917 aagaagctgaaggagagggt 4936
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 agagcggcggcacggcggtg 167 |||||||||||||||||||| Sbjct: 29369738 agagcggcggcacggcggtg 29369757 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 178 agaagaaggagtcggagaaggagaggag 205 ||||||||||| ||||||||||||||| Sbjct: 21897823 agaagaaggagaaggagaaggagaggag 21897796
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 cggcgaggggcgggaagagg 140 |||||||||||||||||||| Sbjct: 34936563 cggcgaggggcgggaagagg 34936544
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 ggagtcggagaaggagagga 204 |||||||||||||||||||| Sbjct: 6612954 ggagtcggagaaggagagga 6612973 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 tgctgctggagaagaaggag 188 |||||||||||||||||||| Sbjct: 2927544 tgctgctggagaagaaggag 2927563
>gb|AC005798.10|AC005798 Homo sapiens chromosome 4 clone RP11-442P12, complete sequence Length = 206631 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 178 agaagaaggagtcggagaaggagaggaggaag 209 ||||||||||| |||||||||||||| |||| Sbjct: 40190 agaagaaggagaaggagaaggagaggaagaag 40221
>gb|AC015977.9| Homo sapiens BAC clone RP11-527I18 from 2, complete sequence Length = 176625 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 176 ggagaagaaggagtcggagaaggagaggagga 207 ||||||| ||||| ||||||||||||||||| Sbjct: 20919 ggagaaggaggagaaggagaaggagaggagga 20888
>gb|AC130784.3| Atelerix albiventris clone LB4-112D1, complete sequence Length = 166122 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 570 catgaggtgatcaccatcca 589 |||||||||||||||||||| Sbjct: 92671 catgaggtgatcaccatcca 92652
>dbj|AP000043.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 14/28, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 178 agaagaaggagtcggagaaggagaggaggaag 209 ||||||||||| ||||||||||| ||||||| Sbjct: 14837 agaagaaggagaaggagaaggagaagaggaag 14868
>gb|AC011293.5|AC011293 Homo sapiens BAC clone RP11-75F5 from Y, complete sequence Length = 159722 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 184 aggagtcggagaaggagaggagga 207 |||||| ||||||||||||||||| Sbjct: 129983 aggagtaggagaaggagaggagga 129960
>gb|AC104487.3| Oryza sativa chromosome 3 BAC OSJNBa0042I09 genomic sequence, complete sequence Length = 171376 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 cggcgaggggcgggaagagg 140 |||||||||||||||||||| Sbjct: 168989 cggcgaggggcgggaagagg 169008
>ref|NM_001002863.1| Danio rerio nucleolar complex associated 3 homolog (S. cerevisiae) (noc3l), mRNA Length = 2585 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 atatcaagaagctgaaggag 338 |||||||||||||||||||| Sbjct: 805 atatcaagaagctgaaggag 824
>dbj|AP003621.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0621D05 Length = 180250 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 agagcggcggcacggcggtg 167 |||||||||||||||||||| Sbjct: 80619 agagcggcggcacggcggtg 80638
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 gaggaagcgcatgaaggcgc 222 |||||||||||||||||||| Sbjct: 667358 gaggaagcgcatgaaggcgc 667377
>dbj|AP004729.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0006A22 Length = 190690 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 178 agaagaaggagtcggagaaggagaggag 205 ||||||||||| ||||||||||||||| Sbjct: 120308 agaagaaggagaaggagaaggagaggag 120281
>dbj|AP003761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0018H04 Length = 142053 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 agagcggcggcacggcggtg 167 |||||||||||||||||||| Sbjct: 132536 agagcggcggcacggcggtg 132555
>dbj|AP007224.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0463E12 Length = 161081 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 tgctgctggagaagaaggag 188 |||||||||||||||||||| Sbjct: 53183 tgctgctggagaagaaggag 53202
>gb|BC045244.1| Xenopus laevis MGC82441 protein, mRNA (cDNA clone IMAGE:5542184) Length = 3074 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 ggtgctgctggagaagaagg 186 |||||||||||||||||||| Sbjct: 1445 ggtgctgctggagaagaagg 1464
>dbj|AP004996.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0027A02 Length = 140402 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 ggagtcggagaaggagagga 204 |||||||||||||||||||| Sbjct: 47329 ggagtcggagaaggagagga 47348
>dbj|AK119272.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-B04, full insert sequence Length = 2548 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 cggcgaggggcgggaagagg 140 |||||||||||||||||||| Sbjct: 41 cggcgaggggcgggaagagg 22
>dbj|AK110965.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-B05, full insert sequence Length = 1932 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 ggagtcggagaaggagagga 204 |||||||||||||||||||| Sbjct: 1596 ggagtcggagaaggagagga 1615
>dbj|AK102756.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107B05, full insert sequence Length = 2847 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 178 agaagaaggagtcggagaaggagaggag 205 ||||||||||| ||||||||||||||| Sbjct: 259 agaagaaggagaaggagaaggagaggag 232
>dbj|AK071568.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023103D13, full insert sequence Length = 1696 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 agagcggcggcacggcggtg 167 |||||||||||||||||||| Sbjct: 535 agagcggcggcacggcggtg 516
>dbj|AK068947.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001A13, full insert sequence Length = 2644 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 ggagtcggagaaggagagga 204 |||||||||||||||||||| Sbjct: 77 ggagtcggagaaggagagga 58
>emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ia Length = 1923819 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 gggaagaggagcagggagag 151 |||||||||||||||||||| Sbjct: 258281 gggaagaggagcagggagag 258262
>gb|AF177346.1|AF177346 Mus musculus PLIC-2 mRNA, complete cds Length = 2298 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 cggcggtggtgctgctggag 179 |||||||||||||||||||| Sbjct: 1316 cggcggtggtgctgctggag 1297
>dbj|AK059411.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-C09, full insert sequence Length = 1619 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 agagcggcggcacggcggtg 167 |||||||||||||||||||| Sbjct: 544 agagcggcggcacggcggtg 525
>gb|AY849619.1| Magnaporthe grisea transporter-like protein mRNA, complete cds Length = 1770 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 164 ggtggtgctgctggagaagaagga 187 ||||||||||||| |||||||||| Sbjct: 775 ggtggtgctgctgaagaagaagga 752
>gb|AF103286.2|AF103286 Homo sapiens clone N86 immunoglobulin heavy chain variable region mRNA, partial cds Length = 345 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 cccactaccaccactaccac 436 |||||||||||||||||||| Sbjct: 144 cccactaccaccactaccac 125
>gb|AC005598.6|AC005598 Homo sapiens chromosome 4 clone C0024K08 map 4p16, complete sequence Length = 166743 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 178 agaagaaggagtcggagaaggagaggaggaag 209 ||||||||||| |||||||||||||| |||| Sbjct: 128106 agaagaaggagaaggagaaggagaggaagaag 128137
>gb|AE003840.3| Drosophila melanogaster chromosome 2R, section 10 of 73 of the complete sequence Length = 272100 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 161 ggcggtggtgctgctggagaagaaggag 188 |||||||||||||| ||||||| ||||| Sbjct: 152018 ggcggtggtgctgcaggagaagcaggag 151991
>dbj|AP001716.1| Homo sapiens genomic DNA, chromosome 21q, section 60/105 Length = 340000 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 178 agaagaaggagtcggagaaggagaggaggaag 209 ||||||||||| ||||||||||| ||||||| Sbjct: 140987 agaagaaggagaaggagaaggagaagaggaag 141018
>gb|AC109510.7| Mus musculus chromosome 8, clone RP23-23D6, complete sequence Length = 185866 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 178 agaagaaggagtcggagaaggagaggaggaag 209 ||||||||||| |||| |||||||||||||| Sbjct: 133027 agaagaaggaggaggaggaggagaggaggaag 132996
>gb|BC079109.1| Rattus norvegicus similar to chromosome 14 open reading frame 94, mRNA (cDNA clone MGC:94104 IMAGE:7125564), complete cds Length = 1552 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 tggtgctgctggagaagaag 185 |||||||||||||||||||| Sbjct: 840 tggtgctgctggagaagaag 859
>gb|AC005447.1|AC005447 Drosophila melanogaster, chromosome 2R, region 43E5-43E10, P1 clone DS03503, complete sequence Length = 77907 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 161 ggcggtggtgctgctggagaagaaggag 188 |||||||||||||| ||||||| ||||| Sbjct: 66266 ggcggtggtgctgcaggagaagcaggag 66239
>gb|AC152721.3| Mus musculus BAC clone RP23-425F13 from chromosome 5, complete sequence Length = 221637 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 aagaagctgaaggagagggt 343 |||||||||||||||||||| Sbjct: 84241 aagaagctgaaggagagggt 84222
>ref|NM_001013995.1| Rattus norvegicus similar to chromosome 14 open reading frame 94 (RGD1305288), mRNA Length = 1552 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 tggtgctgctggagaagaag 185 |||||||||||||||||||| Sbjct: 840 tggtgctgctggagaagaag 859
>gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome Length = 2519802 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 325 agaagctgaaggagagggtcgatg 348 ||||||||||||||||||| |||| Sbjct: 2240076 agaagctgaaggagagggtggatg 2240053
>gb|AC154216.1| Mus musculus BAC clone RP24-354I21 from 13, complete sequence Length = 209934 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 tggtgctgctggagaagaag 185 |||||||||||||||||||| Sbjct: 12740 tggtgctgctggagaagaag 12721
>gb|AC113317.8| Mus musculus chromosome 5, clone RP23-442G8, complete sequence Length = 193961 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 176 ggagaagaaggagtcggagaaggagagg 203 ||||||||||||| ||||||||||||| Sbjct: 46948 ggagaagaaggaggaggagaaggagagg 46921
>emb|AL772212.6| Mouse DNA sequence from clone RP23-80B16 on chromosome 4, complete sequence Length = 123527 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 178 agaagaaggagtcggagaaggagaggaggaag 209 ||||||||||| |||||||||||| |||||| Sbjct: 20876 agaagaaggaggaggagaaggagagaaggaag 20845
>emb|AL928973.3| Mouse DNA sequence from clone RP23-259J7 on chromosome 2, complete sequence Length = 157458 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 178 agaagaaggagtcggagaaggagaggaggaag 209 ||||||||||| |||| |||||||||||||| Sbjct: 82756 agaagaaggaggaggaggaggagaggaggaag 82787
>gb|AC110196.9| Mus musculus chromosome 15, clone RP24-343E7, complete sequence Length = 154367 Score = 40.1 bits (20), Expect = 8.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 165 gtggtgctgctggagaagaaggagtcggagaaggag 200 |||||| || |||||||||||||| |||||||||| Sbjct: 108840 gtggtggtggtggagaagaaggaggaggagaaggag 108805
>emb|AL844583.6| Mouse DNA sequence from clone RP23-240F13 on chromosome X, complete sequence Length = 176870 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 cggcggtggtgctgctggag 179 |||||||||||||||||||| Sbjct: 6110 cggcggtggtgctgctggag 6091
>emb|AL772185.10| Mouse DNA sequence from clone RP23-103G12 on chromosome 2, complete sequence Length = 215155 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 180 aagaaggagtcggagaaggagaggagga 207 ||||||||| ||||||||||||||||| Sbjct: 123223 aagaaggaggaggagaaggagaggagga 123250
>dbj|AP000291.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone:Q64C8, complete sequence Length = 27213 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 178 agaagaaggagtcggagaaggagaggaggaag 209 ||||||||||| ||||||||||| ||||||| Sbjct: 22253 agaagaaggagaaggagaaggagaagaggaag 22284
>dbj|AP000187.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone Q78C10-f32E9, segment 14/21, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 178 agaagaaggagtcggagaaggagaggaggaag 209 ||||||||||| ||||||||||| ||||||| Sbjct: 20813 agaagaaggagaaggagaaggagaagaggaag 20844
>dbj|D78133.1| Rhodopseudomonas sp. DNA for DnaJ protein, DnaK protein, complete cds Length = 3360 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 gccggtgaaggcgaagccgg 123 |||||||||||||||||||| Sbjct: 2790 gccggtgaaggcgaagccgg 2809
>dbj|AP000111.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related, Q78C10-149C3 region, segment 14/20 Length = 100000 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 178 agaagaaggagtcggagaaggagaggaggaag 209 ||||||||||| ||||||||||| ||||||| Sbjct: 20813 agaagaaggagaaggagaaggagaagaggaag 20844 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,374,621 Number of Sequences: 3902068 Number of extensions: 5374621 Number of successful extensions: 154294 Number of sequences better than 10.0: 148 Number of HSP's better than 10.0 without gapping: 149 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 153165 Number of HSP's gapped (non-prelim): 1130 length of query: 591 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 568 effective length of database: 17,143,297,704 effective search space: 9737393095872 effective search space used: 9737393095872 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
