>GLI1_HUMAN (P08151) Zinc finger protein GLI1 (Glioma-associated oncogene)|
           (Oncogene GLI)
          Length = 1106

 Score = 32.0 bits (71), Expect = 0.88
 Identities = 26/73 (35%), Positives = 29/73 (39%), Gaps = 1/73 (1%)
 Frame = -2

Query: 483 PGSWP-EPGLKTTFSPGPCHDPGLKTPFRQAEWREMRVFNPGSWLDPGLKTLGWRHSKV* 307
           PGS P  PG  T + P PC          Q  W E   F   S L PG K LG  +S+  
Sbjct: 748 PGSLPLGPGPPTNYGPNPCPQQASYPDPTQETWGE---FPSHSGLYPGPKALGGTYSQC- 803

Query: 306 SHLACREEPRLVH 268
                   PRL H
Sbjct: 804 --------PRLEH 808

>GL6S_CAPHI (P50426) N-acetylglucosamine-6-sulfatase precursor (EC 3.1.6.14)|
           (G6S) (Glucosamine-6-sulfatase)
          Length = 559

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +2

Query: 320 CRQPKVFSPGSSHDPGLKTLISRHSACRKGVFS 418
           CR P+VF PG   DP L  + S H + R   FS
Sbjct: 525 CRTPRVFDPGYRFDPRL--MFSNHGSVRTRRFS 555

>PRPA3_DROER (Q8I1F6) Probable phenoloxidase subunit A3 precursor (EC 1.14.18.1)|
           (Tyrosinase A3) (PO A3)
          Length = 683

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 23/61 (37%), Positives = 28/61 (45%)
 Frame = -1

Query: 478 VVARTGTKDHLQSRAVPRPGTKDPFSAGGVAGNEGL*SRVVARPGTKDLGLAAFQSLVPP 299
           V  +  T D LQS AV      +P     V  N  L   ++ R  TKDLGL AF  + P 
Sbjct: 98  VFIKMPTVDELQSVAVYARDRVNP-----VLFNYALSVAMLHRSDTKDLGLPAFAQIFPD 152

Query: 298 R 296
           R
Sbjct: 153 R 153

>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast|
           precursor (LHCII type I CAB-AB80) (LHCP)
          Length = 269

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 26/67 (38%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
 Frame = +2

Query: 284 SSRQARWD*TLECRQPKVFSPGSSHDPGLKTLISRHSACRKGVFSPGS-WHGPGLKVVFS 460
           SS  A    TL  +Q K+ +P SS + G      R SA  K V S GS W+GP       
Sbjct: 6   SSSMALSSPTLAGKQLKL-NP-SSQELGAARFTMRKSATTKKVASSGSPWYGPDRVKYLG 63

Query: 461 PGSGHDP 481
           P SG  P
Sbjct: 64  PFSGESP 70

>AFSA_STRGR (P18394) Probable A-factor biosynthesis enzyme|
          Length = 301

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +2

Query: 281 GSSRQARWD*TLECRQPKVFSPGSSHDPGLKTL-ISRHSAC 400
           G+ R+  W+  ++ R P +F   + H PG+  L  +R +AC
Sbjct: 194 GTGREGVWELRVDTRHPTLFQRPNDHVPGMLLLEAARQAAC 234

>GP107_HUMAN (Q5VW38) Protein GPR107 precursor (Lung seven transmembrane|
           receptor 1)
          Length = 600

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
 Frame = -2

Query: 171 SINSHIVSIFFHYFCFVLCFIYF---VFFYLQLNI*F 70
           +IN   + +F HY+  ++C+IYF   + F L+L + F
Sbjct: 485 AINLAKLKLFRHYYVLIVCYIYFTRIIAFLLKLAVPF 521

>ATX7_MOUSE (Q8R4I1) Ataxin-7 (Spinocerebellar ataxia type 7 protein homolog)|
          Length = 867

 Score = 25.4 bits (54), Expect(2) = 7.0
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +1

Query: 316 GMPPAQGL*SRVEPRPGIKDPHFPPL 393
           G P  QG  + ++P PG + PH PPL
Sbjct: 436 GCPAQQGGSTPIDPPPGQESPH-PPL 460



 Score = 21.9 bits (45), Expect(2) = 7.0
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 375 PSFPATPPAEKGSLVPGRGTARD 443
           P  PAT PA + S   G G  R+
Sbjct: 458 PPLPATEPASRLSSEEGEGDDRE 480

>SPG3_YEAST (Q04398) Stationary phase protein 3|
          Length = 127

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -2

Query: 159 HIVSIFFHYFCFVLCFIYFVFFYLQLNI*FSNL 61
           +I S+F   F FV  FI+  FFY+ L   F +L
Sbjct: 25  NIFSLFLFLFVFVFVFIFVYFFYVILFYRFCSL 57

>LDLR2_XENLA (Q99088) Low-density lipoprotein receptor 2 precursor (LDL receptor|
           2)
          Length = 892

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 4/61 (6%)
 Frame = -2

Query: 210 THCDLTLN----LG*IFSINSHIVSIFFHYFCFVLCFIYFVFFYLQLNI*FSNLNSLKFV 43
           TH  L  N     G + S  SH  +++      +LC + F  F L  N    N NS+ F 
Sbjct: 796 THSQLARNKFAEAGVVESARSHPTALYIVLPILILCLVSFGGFLLWKNWRLKNTNSINFD 855

Query: 42  N 40
           N
Sbjct: 856 N 856

>CO4A2_ASCSU (P27393) Collagen alpha-2(IV) chain precursor|
          Length = 1763

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 14/24 (58%), Positives = 14/24 (58%)
 Frame = -2

Query: 483 PGSWPEPGLKTTFSPGPCHDPGLK 412
           PG   EPG  TT  PGP   PGLK
Sbjct: 813 PGPKGEPGPSTTGPPGPPGFPGLK 836


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,307,529
Number of Sequences: 219361
Number of extensions: 1419822
Number of successful extensions: 3861
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3850
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3304846491
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)