ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd26l09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY643842.1|AY643842S1 Hordeum vulgare subsp. vulgare clone BAC 519K7 hardness locus region Length = 12998 Score = 274 bits (138), Expect = 3e-70 Identities = 240/272 (88%), Gaps = 9/272 (3%) Strand = Plus / Minus Query: 209 gtttaggcccgtaagcctgctttagagaggagctcgacatggttgggacaacggggctta 268 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 11766 gtttaggcccgtaagcctgctttagagaggagctcgacacggttgggacaacggggctta 11707 Query: 269 tgaacgagtcgcggctcctctcgacaagcgaggtgggactaaactttggaatgccgccag 328 | ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11706 taaaccagtggcggctcctctcgacaagcgaggtgggactaaactttggaatgccgccag 11647 Query: 329 cccaaggtctttagtcccgggtcgagccacgacccgggattaaagaccctcatttcccgc 388 ||||| | |||||||||||||| |||||||||||||||| ||||| |||| ||| Sbjct: 11646 cccaa-gcctttagtcccgggtggagccacgacccgggactaaagcccct-------cgc 11595 Query: 389 cactccgcctgccgaaaaggggtctttagtcccgggtcgtggcacggcccgggactgaag 448 | | |||| ||| |||||||||||||||| | | ||||||||| | ||||||||| ||| Sbjct: 11594 c-cgccgcttgcagaaaaggggtctttagccacaggtcgtggctagacccgggactaaag 11536 Query: 449 gtggtctttagtcccggttcgggccacgaccc 480 | |||||||||||||| ||| ||| |||||| Sbjct: 11535 ggtgtctttagtcccggctcgagccccgaccc 11504 Score = 93.7 bits (47), Expect = 5e-16 Identities = 113/135 (83%) Strand = Plus / Minus Query: 335 gtctttagtcccgggtcgagccacgacccgggattaaagaccctcatttcccgccactcc 394 |||||||||||||| ||||||| |||||||||| ||||| ||| |||||||| | Sbjct: 11532 gtctttagtcccggctcgagccccgacccgggactaaaggcccgtgcttcccgccttttg 11473 Query: 395 gcctgccgaaaaggggtctttagtcccgggtcgtggcacggcccgggactgaaggtggtc 454 | |||||||||| |||||||||||| ||||||||||| | | ||||||| |||| ||| Sbjct: 11472 gtctgccgaaaaagggtctttagtctcgggtcgtggctccactcgggactaaagggtgtc 11413 Query: 455 tttagtcccggttcg 469 ||||||||||||||| Sbjct: 11412 tttagtcccggttcg 11398 Score = 85.7 bits (43), Expect = 1e-13 Identities = 49/51 (96%) Strand = Plus / Minus Query: 147 ttgaaactatatgagaatttatagagaaaattcaacctaaattcaaagtga 197 |||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 11888 ttgaaactatatgagaatttatagagaaaatttaacctaaattcgaagtga 11838 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 150 aaactatatgagaatttatagagaaaattcaacctaaattcaaagtgaggtcac 203 ||||||||| ||| |||| ||||||||||||||| |||||||||||||||||| Sbjct: 11788 aaactatattcgaaattatggagaaaattcaacctgaattcaaagtgaggtcac 11841 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 337 ctttagtcccgggtcgagccacgacccgggattaaagaccct 378 ||||||||||| || ||||||||||||| || |||||||||| Sbjct: 11419 ctttagtcccgagtggagccacgacccgagactaaagaccct 11460 Score = 44.1 bits (22), Expect = 0.42 Identities = 34/38 (89%) Strand = Plus / Plus Query: 412 ctttagtcccgggtcgtggcacggcccgggactgaagg 449 |||||||||||||||||||| | ||||||||| |||| Sbjct: 11603 ctttagtcccgggtcgtggctccacccgggactaaagg 11640 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 337 ctttagtcccgggtcgagccacgacc 362 ||||||||||||||| |||||||||| Sbjct: 11536 ctttagtcccgggtctagccacgacc 11561
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence Length = 124050 Score = 93.7 bits (47), Expect = 5e-16 Identities = 50/51 (98%) Strand = Plus / Plus Query: 147 ttgaaactatatgagaatttatagagaaaattcaacctaaattcaaagtga 197 ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 100225 ttgaaactatatgagaatttatagagaaaattcaatctaaattcaaagtga 100275 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 400 ccgaaaaggggtctttagtcccgggtcgtggcacggcccgggactgaaggtggtctttag 459 ||||||| ||| ||||| |||||||||||||| | ||||||||| |||| ||||||||| Sbjct: 100615 ccgaaaaagggcctttaatcccgggtcgtggctccacccgggactaaagggggtctttag 100674 Query: 460 tcccggttcgggccacg 476 |||||||||| |||||| Sbjct: 100675 tcccggttcgagccacg 100691 Score = 77.8 bits (39), Expect = 3e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 203 cagtgcgtttaggcccgtaagcctgctttagagaggagctcga 245 ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 100353 cagtgagtttaggcccgtaagcctgctttagagaggagctcga 100395 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 337 ctttagtcccgggtcgagccacgacccgggattaaagaccct 378 |||||||||||||| |||||||||||||||||||||| |||| Sbjct: 100663 ctttagtcccgggtggagccacgacccgggattaaaggccct 100622 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 147 ttgaaactatatgagaatttatagagaaaattcaacctaaattcaaagtgaggtcac 203 |||||||||||| ||| |||| ||||||||||||||| ||||||||||||| |||| Sbjct: 100348 ttgaaactatattcgaaattatggagaaaattcaacctgaattcaaagtgagttcac 100292 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 337 ctttagtcccgggtcgagccacgacccgggattaaagaccctc 379 |||||||||||||| |||||||||||||||| ||||| ||||| Sbjct: 100485 ctttagtcccgggtggagccacgacccgggactaaagcccctc 100527 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 341 agtcccgggtcgagccacgacccgggattaaag 373 |||||||||| |||||||||||||||| ||||| Sbjct: 103984 agtcccgggtggagccacgacccgggactaaag 104016 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 334 ggtctttagtcccgggtcgagccacgacccgggattaaaga 374 ||||||||||||||| |||||||||| |||||| |||||| Sbjct: 100666 ggtctttagtcccggttcgagccacgcaccgggactaaaga 100706 Score = 44.1 bits (22), Expect = 0.42 Identities = 34/38 (89%) Strand = Plus / Minus Query: 337 ctttagtcccgggtcgagccacgacccgggattaaaga 374 |||||||||||||| ||||||| | |||||| |||||| Sbjct: 94310 ctttagtcccgggttgagccaccaaccgggactaaaga 94273 Score = 44.1 bits (22), Expect = 0.42 Identities = 34/38 (89%) Strand = Plus / Plus Query: 337 ctttagtcccgggtcgagccacgacccgggattaaaga 374 |||||||||||||| ||||||| | |||||| |||||| Sbjct: 64445 ctttagtcccgggttgagccaccaaccgggactaaaga 64482 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 412 ctttagtcccgggtcgtggcacggcccgggact 444 |||||||||||||||||||| | ||||||||| Sbjct: 104016 ctttagtcccgggtcgtggctccacccgggact 103984 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 412 ctttagtcccgggtcgtggcacggcccgggact 444 |||||||||||||||||||| | ||||||||| Sbjct: 100521 ctttagtcccgggtcgtggctccacccgggact 100489 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 337 ctttagtcccgggtcgagccacgacccgggattaaag 373 |||||||||||||| ||||||| | |||||| ||||| Sbjct: 64528 ctttagtcccgggttgagccaccaaccgggactaaag 64564 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 341 agtcccgggtcgagccacgacccgggattaaag 373 |||||||||| |||| ||||||||||| ||||| Sbjct: 61852 agtcccgggtggagcgacgacccgggactaaag 61820
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence Length = 261265 Score = 93.7 bits (47), Expect = 5e-16 Identities = 50/51 (98%) Strand = Plus / Minus Query: 147 ttgaaactatatgagaatttatagagaaaattcaacctaaattcaaagtga 197 ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 55245 ttgaaactatatgagaaattatagagaaaattcaacctaaattcaaagtga 55195 Score = 89.7 bits (45), Expect = 8e-15 Identities = 69/77 (89%) Strand = Plus / Minus Query: 400 ccgaaaaggggtctttagtcccgggtcgtggcacggcccgggactgaaggtggtctttag 459 ||||||| ||| |||||||||||||||||||| | ||||||||| |||| ||||||||| Sbjct: 54905 ccgaaaaagggcctttagtcccgggtcgtggctccacccgggactaaagggggtctttag 54846 Query: 460 tcccggttcgggccacg 476 |||||||||| |||||| Sbjct: 54845 tcccggttcgagccacg 54829 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 407 ggggtctttagtcccgggtcgtggcacggcccgggactgaaggtggtctttagtcccggt 466 ||||||||||||||||| ||| | |||| |||||||| |||| |||||||||||||||| Sbjct: 54856 ggggtctttagtcccggttcgagccacgcaccgggactaaagggggtctttagtcccggt 54797 Query: 467 tcgggccacg 476 ||| |||||| Sbjct: 54796 tcgagccacg 54787 Score = 60.0 bits (30), Expect = 7e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 337 ctttagtcccgggtcgagccacgacccgggattaaagaccct 378 |||||||||||||| |||||||||||||||| ||||| |||| Sbjct: 54857 ctttagtcccgggtggagccacgacccgggactaaaggccct 54898 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 147 ttgaaactatatgagaatttatagagaaaattcaacctaaattcaaagt 195 |||||||||||| ||| |||| ||||||||||||||| |||||||||| Sbjct: 55146 ttgaaactatattcgaaattatggagaaaattcaacctgaattcaaagt 55194 Score = 58.0 bits (29), Expect = 3e-05 Identities = 36/37 (97%), Gaps = 1/37 (2%) Strand = Plus / Minus Query: 209 gtttaggcccgtaagcctgctttagagaggagctcga 245 |||||||||||||||||| |||||||||||||||||| Sbjct: 55135 gtttaggcccgtaagcct-ctttagagaggagctcga 55100 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 334 ggtctttagtcccgggtcgagccacgacccgggattaaaga 374 ||||||||||||||| |||||||||| |||||| |||||| Sbjct: 54812 ggtctttagtcccggttcgagccacgcaccgggactaaaga 54772 Score = 48.1 bits (24), Expect = 0.027 Identities = 51/60 (85%) Strand = Plus / Plus Query: 406 aggggtctttagtcccgggtcgtggcacggcccgggactgaaggtggtctttagtcccgg 465 ||||| |||||||||||| |||||| | |||||||| |||| ||||||||||||||| Sbjct: 54927 aggggcctttagtcccggtgcgtggctctacccgggacgaaagggggtctttagtcccgg 54986 Score = 48.1 bits (24), Expect = 0.027 Identities = 36/40 (90%) Strand = Plus / Minus Query: 334 ggtctttagtcccgggtcgagccacgacccgggattaaag 373 ||||||||||||||| |||||||||| |||||| ||||| Sbjct: 54854 ggtctttagtcccggttcgagccacgcaccgggactaaag 54815 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 401 cgaaaaggggtctttagtcccgggtcgtggc 431 ||||| |||||||||||||||||| |||||| Sbjct: 54964 cgaaagggggtctttagtcccggggcgtggc 54994 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 337 ctttagtcccgggtcgagccacgacccgggattaaag 373 |||||||||||||| ||||||| | |||||| ||||| Sbjct: 101096 ctttagtcccgggttgagccaccaaccgggactaaag 101132 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 337 ctttagtcccgggtcgagccacgacccgggattaaag 373 |||||||||||||| ||||||| | |||||| ||||| Sbjct: 101013 ctttagtcccgggttgagccaccaaccgggactaaag 101049 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 337 ctttagtcccgggtcgagccacgacccgggattaaag 373 |||||||||||||| ||||||| | |||||| ||||| Sbjct: 100930 ctttagtcccgggttgagccaccaaccgggactaaag 100966 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 337 ctttagtcccgggtcgagccacgacccgggattaaag 373 |||||||||||||| ||||||| | |||||| ||||| Sbjct: 61381 ctttagtcccgggttgagccaccaaccgggactaaag 61417 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 337 ctttagtcccgggtcgagccacgacccgggattaaag 373 |||||||||||||| ||||||| | |||||| ||||| Sbjct: 61298 ctttagtcccgggttgagccaccaaccgggactaaag 61334 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 337 ctttagtcccgggtcgagccacgacccgggattaaag 373 |||||||||||||| ||||||| | |||||| ||||| Sbjct: 61215 ctttagtcccgggttgagccaccaaccgggactaaag 61251 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 341 agtcccgggtcgagccacgacccgggattaaag 373 |||||||||| ||||||||||||| || ||||| Sbjct: 53098 agtcccgggtggagccacgacccgagactaaag 53066
>gb|AY643843.1|AY643842S2 Hordeum vulgare subsp. vulgare clones BAC 519K7 and 799C8 hardness locus region Length = 129099 Score = 87.7 bits (44), Expect = 3e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 397 ctgccgaaaaggggtctttagtcccgggtcgtggcacggcccgggactgaaggtggtctt 456 |||||||||| ||| |||||||||||||||||||| | ||||||||| |||| |||||| Sbjct: 98812 ctgccgaaaaagggcctttagtcccgggtcgtggctccacccgggactaaagggggtctt 98871 Query: 457 tagtcccggttcgggccacg 476 ||||||| ||||| |||||| Sbjct: 98872 tagtcccagttcgagccacg 98891 Score = 60.0 bits (30), Expect = 7e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 337 ctttagtcccgggtcgagccacgacccgggattaaagaccct 378 |||||||||||||| |||||||||||||||| ||||| |||| Sbjct: 98863 ctttagtcccgggtggagccacgacccgggactaaaggccct 98822 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 334 ggtctttagtcccgggtcgagccacgacccgggattaaaga 374 ||||||||||||| | |||||||||| |||||| |||||| Sbjct: 98866 ggtctttagtcccagttcgagccacgcaccgggactaaaga 98906
>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence Length = 439641 Score = 85.7 bits (43), Expect = 1e-13 Identities = 49/51 (96%) Strand = Plus / Minus Query: 147 ttgaaactatatgagaatttatagagaaaattcaacctaaattcaaagtga 197 ||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 189091 ttgaaactatatgagaatttatagagaaacttaaacctaaattcaaagtga 189041 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 397 ctgccgaaaaggggtctttagtcccgggtcgtggcacggcccgggactgaaggtggtctt 456 |||||||||| ||| |||||||||||||||||||| | ||||||||| |||| |||||| Sbjct: 273359 ctgccgaaaaagggcctttagtcccgggtcgtggctccacccgggactaaagggggtctt 273418 Query: 457 tagtcccgg 465 ||||||||| Sbjct: 273419 tagtcccgg 273427 Score = 81.8 bits (41), Expect = 2e-12 Identities = 110/133 (82%) Strand = Plus / Minus Query: 337 ctttagtcccgggtcgagccacgacccgggattaaagaccctcatttcccgccactccgc 396 |||||||||||| ||||||| |||||||||| ||||| ||| |||||||| | | Sbjct: 188843 ctttagtcccggctcgagccccgacccgggactaaaggcccctgcttcccgccttttggt 188784 Query: 397 ctgccgaaaaggggtctttagtcccgggtcgtggcacggcccgggactgaaggtggtctt 456 |||| ||||| ||| |||||||||||||||||||| | ||||| ||| |||| ||||| Sbjct: 188783 ctgcagaaaaagggcctttagtcccgggtcgtggctccacccggaactaaagggtgtctt 188724 Query: 457 tagtcccggttcg 469 ||||||||||||| Sbjct: 188723 tagtcccggttcg 188711 Score = 77.8 bits (39), Expect = 3e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 147 ttgaaactatatgagaatttatagagaaaattcaacctaaattcaaagtga 197 ||||||||||||||||| | ||||| ||||||||||||||||||||||||| Sbjct: 424445 ttgaaactatatgagaaatcatagacaaaattcaacctaaattcaaagtga 424495 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 397 ctgccgaaaaggggtctttagtcccgggtcgtggcacggcccgggactgaaggtggtctt 456 |||||||||| ||| |||||||||||||||||||| | ||||||||| |||| |||||| Sbjct: 387674 ctgccgaaaaagggcctttagtcccgggtcgtggctccacccgggactaaagggggtctt 387733 Query: 457 tagtcccgg 465 |||||||| Sbjct: 387734 cagtcccgg 387742 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 147 ttgaaactatatgagaatttatagagaaaattcaacctaaattcaaagtga 197 ||||||||||||||||| | ||||| |||||||||||| |||||||||||| Sbjct: 308670 ttgaaactatatgagaaatcatagacaaaattcaacctgaattcaaagtga 308720 Score = 69.9 bits (35), Expect = 7e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 209 gtttaggcccgtaagcctgctttagagaggagctcgaca 247 ||||||||||||||||||| ||||||||||||||||||| Sbjct: 188969 gtttaggcccgtaagcctgttttagagaggagctcgaca 188931 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 147 ttgaaactatatgagaatttatagagaaaattcaacctaaattcaaagtgaggtcac 203 |||||||||||| ||| |||| ||||||||| ||||| |||||||||||||||||| Sbjct: 188988 ttgaaactatatttgaaattatggagaaaattaaacctgaattcaaagtgaggtcac 189044 Score = 63.9 bits (32), Expect = 5e-07 Identities = 116/143 (81%), Gaps = 2/143 (1%) Strand = Plus / Minus Query: 335 gtctttagtcccgggtcgagccacgacccgggattaaagaccctcatttcccgccactcc 394 ||||||||||| || |||||||||| ||||||| ||||| ||| |||||||| Sbjct: 217170 gtctttagtcctggttcgagccacgccccgggactaaaggcccctgcttcccgccttctg 217111 Query: 395 gcctgccgaaaaggggtctttagtcccgggtcgtggcacggcccgggactgaaggtggtc 454 | | |||||||| ||| |||||||||||||||||||| | ||||||||| ||| || | Sbjct: 217110 gtcagccgaaaaagggcctttagtcccgggtcgtggctccacccgggactaaag--gggc 217053 Query: 455 tttagtcccggttcgggccacga 477 ||||||||||| ||| ||||||| Sbjct: 217052 tttagtcccggatcgagccacga 217030 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 211 ttaggcccgtaagcctgctttagagaggagctcga 245 |||||||||||||||||||||||| |||||||||| Sbjct: 424556 ttaggcccgtaagcctgctttagaaaggagctcga 424590 Score = 61.9 bits (31), Expect = 2e-06 Identities = 68/79 (86%), Gaps = 1/79 (1%) Strand = Plus / Minus Query: 399 gccgaaaaggggtctttagtcccgggtcgtggcacggcccgggactgaaggtg-gtcttt 457 |||||||| ||| |||||||||| ||||||||| | ||||||||| |||| | |||||| Sbjct: 217224 gccgaaaaagggcctttagtcccaggtcgtggctccacccgggactaaaggggtgtcttt 217165 Query: 458 agtcccggttcgggccacg 476 ||||| |||||| |||||| Sbjct: 217164 agtcctggttcgagccacg 217146 Score = 60.0 bits (30), Expect = 7e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 337 ctttagtcccgggtcgagccacgacccgggattaaagaccct 378 |||||||||||||| |||||||||||||||| ||||| |||| Sbjct: 387725 ctttagtcccgggtggagccacgacccgggactaaaggccct 387684 Score = 60.0 bits (30), Expect = 7e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 337 ctttagtcccgggtcgagccacgacccgggattaaagaccct 378 |||||||||||||| |||||||||||||||| ||||| |||| Sbjct: 273410 ctttagtcccgggtggagccacgacccgggactaaaggccct 273369 Score = 60.0 bits (30), Expect = 7e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 337 ctttagtcccgggtcgagccacgacccgggattaaagaccct 378 |||||||||||||| |||||||||||||||| ||||| |||| Sbjct: 217057 ctttagtcccgggtggagccacgacccgggactaaaggccct 217098 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 337 ctttagtcccgggtcgagccacgacccgggattaaagac 375 |||||||||||||| |||||||| ||||||| ||||||| Sbjct: 424680 ctttagtcccgggtggagccacggcccgggactaaagac 424718 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 211 ttaggcccgtaagcctgctttagagaggagctcga 245 |||||||||||||||||||||| | |||||||||| Sbjct: 308781 ttaggcccgtaagcctgctttataaaggagctcga 308815 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 337 ctttagtcccgggtcgagccacgacccgggattaaagaccct 378 |||||||||||||| ||||||||||| |||| ||||| |||| Sbjct: 217175 ctttagtcccgggtggagccacgacctgggactaaaggccct 217216 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 337 ctttagtcccgggtcgagccacgacccgggattaaaga 374 |||||||||||| ||||||||||| |||||| |||||| Sbjct: 217053 ctttagtcccggatcgagccacgaaccgggactaaaga 217016 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 337 ctttagtcccgggtcgagccacgacccgggattaaagaccct 378 ||||||| |||||| |||||||||||||||| ||||| |||| Sbjct: 188732 ctttagttccgggtggagccacgacccgggactaaaggccct 188773 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 334 ggtctttagtcccgggtcgagccacgacccgggattaaaga 374 ||||||||||||||| ||||||| ||| |||||| |||||| Sbjct: 273413 ggtctttagtcccggatcgagccccgaaccgggactaaaga 273453 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 341 agtcccgggtcgagccacgacccgggattaaag 373 |||||||||| |||||||||||||||| ||||| Sbjct: 187270 agtcccgggtggagccacgacccgggactaaag 187238 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 341 agtcccgggtcgagccacgacccggga 367 |||||||||| |||||||||||||||| Sbjct: 310469 agtcccgggtggagccacgacccggga 310495 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 412 ctttagtcccgggtcgtggcacggcccgggact 444 |||||||||||||| | | |||||||||||||| Sbjct: 424680 ctttagtcccgggtggagccacggcccgggact 424712 Score = 42.1 bits (21), Expect = 1.7 Identities = 42/49 (85%) Strand = Plus / Minus Query: 147 ttgaaactatatgagaatttatagagaaaattcaacctaaattcaaagt 195 |||||||||||| ||| || | |||||||||||| || |||||||||| Sbjct: 424544 ttgaaactatattcgaaattgtggagaaaattcaatctgaattcaaagt 424496 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 412 ctttagtcccgggtcgtggcacggcccgggact 444 |||||||||||||||||||| | ||||||||| Sbjct: 187238 ctttagtcccgggtcgtggctccacccgggact 187270
>gb|AY534123.1|SEG_AY534122S2 Aegilops tauschii transposons Caspar, XJ, Angela, and XJ, complete sequence; LRR protein WM1.7 (WM1.7) and LRR protein WM1.12 (WM1.12) genes, complete cds; transposons Ophelia2, Angela3s, and XJ3, complete sequence; LRR protein WM1.3 (WM1.3) gene, complete cds; Stowaway MITE, transposons XJ1, Jody, Angela, and XJ and Stowaway MITE, complete sequence; LRR protein WM1.2 (WM1.2) and LLR protein WM1.1 (WM1.1) genes, complete cds; transposons XJ, XA, Angela, and Fred and WM1.11 gene, complete sequence; RPM1-like sequence and LRR protein WM1.10 (WM1.10) genes, complete cds; and transposon XJ, complete sequence Length = 198649 Score = 73.8 bits (37), Expect = 5e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 211 ttaggcccgtaagcctgctttagagaggagctcgaca 247 ||||||||||||||||||||||||||||||||||||| Sbjct: 3346 ttaggcccgtaagcctgctttagagaggagctcgaca 3382 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Plus Query: 286 ctctcgacaagcgaggtgggactaaacttt 315 ||||| || ||||||||||||||||||||| Sbjct: 145481 ctctcaactagcgaggtgggactaaacttt 145510 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 295 agcgaggtgggactaaacttt 315 ||||||||||||||||||||| Sbjct: 13026 agcgaggtgggactaaacttt 13046 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 289 tcgacaagcgaggtgggactaaac 312 |||||| ||||||||||||||||| Sbjct: 178754 tcgacaggcgaggtgggactaaac 178777
>gb|AY642926.1| Hordeum vulgare BAC CC24_14, complete sequence Length = 184425 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 397 ctgccgaaaaggggtctttagtcccgggtcgtggcacggcccgggactgaaggtggtctt 456 |||||||||| ||| |||||||||||||||||||| | || |||||| |||| |||||| Sbjct: 32558 ctgccgaaaaagggcctttagtcccgggtcgtggctccacctgggactaaagggggtctt 32499 Query: 457 tagtcccgg 465 ||||||||| Sbjct: 32498 tagtcccgg 32490 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 337 ctttagtcccgggtcgagccacgacccgggattaaagaccct 378 |||||||||| ||| |||||||||||||||| ||||| |||| Sbjct: 32507 ctttagtcccaggtggagccacgacccgggactaaaggccct 32548 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 334 ggtctttagtcccgggtcgagccacgacccgggattaaaga 374 ||||||||||||||| ||||||| ||| |||||| |||||| Sbjct: 32504 ggtctttagtcccggatcgagccccgaaccgggactaaaga 32464 Score = 44.1 bits (22), Expect = 0.42 Identities = 37/42 (88%) Strand = Plus / Plus Query: 409 ggtctttagtcccgggtcgtggcacggcccgggactgaaggt 450 |||||||||||||||| ||||||| | |||||||| ||||| Sbjct: 32621 ggtctttagtcccggggcgtggcaagaaccgggactaaaggt 32662 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 437 ccgggactgaaggtggtctttagtcccgg 465 |||||||| |||| ||||||||||||||| Sbjct: 32607 ccgggactaaaggcggtctttagtcccgg 32635 Score = 40.1 bits (20), Expect = 6.5 Identities = 35/40 (87%) Strand = Plus / Minus Query: 337 ctttagtcccgggtcgagccacgacccgggattaaagacc 376 |||||||||||| || |||||| ||||||| |||||||| Sbjct: 32660 ctttagtcccggttcttgccacgccccgggactaaagacc 32621 Score = 40.1 bits (20), Expect = 6.5 Identities = 47/56 (83%) Strand = Plus / Minus Query: 412 ctttagtcccgggtcgtggcacggcccgggactgaaggtggtctttagtcccggtt 467 |||||||||||| || || |||| ||||||||| ||| | |||||||||||||| Sbjct: 32660 ctttagtcccggttcttgccacgccccgggactaaagaccgcctttagtcccggtt 32605
>gb|AF474072.1| Hordeum vulgare sp. vulgare cultivar Morex BAC clone 773k14, complete sequence Length = 113510 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 209 gtttaggcccgtaagcctgctttagagaggagctcga 245 ||||||||||||||||||||| ||||||||||||||| Sbjct: 76270 gtttaggcccgtaagcctgctatagagaggagctcga 76306 Score = 60.0 bits (30), Expect = 7e-06 Identities = 117/142 (82%), Gaps = 3/142 (2%) Strand = Plus / Plus Query: 337 ctttagtcccgggtcgagccacgacccgggattaaagaccctcat-ttcccgccactccg 395 |||||||||||| | ||||||| ||||||| ||||||||| | |||||||| || | Sbjct: 76438 ctttagtcccggttggagccacaccccgggactaaagaccccctgcttcccgcctcttgg 76497 Query: 396 cctgc-cgaaaaggggtctttagtcccgggtcgtggcacggcccgggactgaaggtggtc 454 |||| ||||||| || |||||||||||||||||||| | |||||||| |||| |||| Sbjct: 76498 tctgcgcgaaaagaggcctttagtcccgggtcgtggctc-caccgggactaaagggggtc 76556 Query: 455 tttagtcccggttcgggccacg 476 | ||||||||| ||| |||||| Sbjct: 76557 tgtagtcccggctcgagccacg 76578 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 407 ggggtctttagtcccgggtcgtggcacggcccgggactgaaggtggtctttagtcccgg 465 |||||||||||||||||| ||||| | |||||||| |||| |||||||||||||| Sbjct: 76479 ggggtctttagtcccggggtgtggctccaaccgggactaaagggcgtctttagtcccgg 76421 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 337 ctttagtcccgggtcgagccacgacccgggattaaagac 375 |||||||||||||| || ||||| ||||||| ||||||| Sbjct: 76396 ctttagtcccgggtggaaccacgccccgggactaaagac 76434 Score = 42.1 bits (21), Expect = 1.7 Identities = 34/37 (91%), Gaps = 1/37 (2%) Strand = Plus / Minus Query: 337 ctttagtcccgggtcgagccacgacccgggattaaag 373 |||||||||||| | |||||||||||||||| ||||| Sbjct: 76550 ctttagtcccgg-tggagccacgacccgggactaaag 76515 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Minus Query: 337 ctttagtcccgggtcgagccacgacccgggattaaag 373 |||||||||||||| ||||||| | |||||| ||||| Sbjct: 63457 ctttagtcccgggttgagccaccaaccgggactaaag 63421
>emb|CR626926.1| Aegilops tauschii Length = 94421 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 211 ttaggcccgtaagcctgctttagagaggagctcgaca 247 |||||||| ||||||||||||||||| |||||||||| Sbjct: 55191 ttaggcccataagcctgctttagagatgagctcgaca 55155
>gb|AF446141.1| Aegilops tauschii LZ-NBS-LRR class RGA, NBS-LRR class RGA, HCBT-like putative defense response protein, and putative alliin lyase genes, complete cds; and unknown genes Length = 106618 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 165 ttatagagaaaattcaacctaaattca 191 ||||||||||||||||||||||||||| Sbjct: 81644 ttatagagaaaattcaacctaaattca 81618 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 221 aagcctgctttagagaggagctcga 245 ||||||||||||||||||||||||| Sbjct: 51967 aagcctgctttagagaggagctcga 51943 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 296 gcgaggtgggactaaactttg 316 ||||||||||||||||||||| Sbjct: 51892 gcgaggtgggactaaactttg 51872
>gb|AE014848.1| Plasmodium falciparum 3D7 chromosome 12, section 5 of 9 of the complete sequence Length = 250707 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 22 aaaaatgaaagtaaaattattcacaaattttaaa 55 |||||||||||||| |||||||| |||||||||| Sbjct: 77094 aaaaatgaaagtaatattattcaaaaattttaaa 77127
>gb|AE014841.1| Plasmodium falciparum 3D7 chromosome 11 section 6 of 8 of the complete sequence Length = 252420 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 38 ttattcacaaattttaaagaattca 62 ||||||||||||||||||||||||| Sbjct: 208456 ttattcacaaattttaaagaattca 208432
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Plus Query: 437 ccgggactgaaggtggtctttagtcccggttc 468 |||||||| ||| ||||||||||||||||||| Sbjct: 6556283 ccgggactaaagatggtctttagtcccggttc 6556314 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 437 ccgggactgaaggtggtctttagtcccggtt 467 |||||||| ||| |||||||||||||||||| Sbjct: 18634406 ccgggactaaagatggtctttagtcccggtt 18634436 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Plus Query: 411 tctttagtcccgggtcgtggcacggcccgggactgaaggtggtctttagtcccggttcg 469 ||||||||||||||| ||| || |||||||| ||| || ||||||||||||||||| Sbjct: 10492889 tctttagtcccgggttgtgttaccaaccgggactaaagatgatctttagtcccggttcg 10492947 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Plus Query: 411 tctttagtcccgggtcgtggcacggcccgggactgaaggtggtctttagtcccggttcg 469 ||||||||||||||| ||| || |||||||| ||| || ||||||||||||||||| Sbjct: 9002806 tctttagtcccgggttgtgttaccaaccgggactaaagatgatctttagtcccggttcg 9002864 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 437 ccgggactgaaggtggtctttagtcccggttcg 469 |||||||| ||| || ||||||||||||||||| Sbjct: 18475880 ccgggactaaagatgatctttagtcccggttcg 18475912 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 436 cccgggactgaaggtggtctttagtcccggtt 467 ||||||||| ||| || ||||||||||||||| Sbjct: 10810199 cccgggactaaagatgatctttagtcccggtt 10810168
>dbj|AP003513.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0690H04 Length = 137319 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Plus Query: 437 ccgggactgaaggtggtctttagtcccggttc 468 |||||||| ||| ||||||||||||||||||| Sbjct: 72659 ccgggactaaagatggtctttagtcccggttc 72690
>gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence Length = 153766 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 211 ttaggcccgtaagcctgctttagagaggagctcga 245 |||||||| |||||| |||||||||||||||||| Sbjct: 140625 ttaggcccagaagcctactttagagaggagctcga 140659
>gb|AY146588.1| Triticum monococcum BAC clone 453N11, complete sequence Length = 285444 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 285 cctctcgacaagcgaggtgggactaaacttt 315 |||||| || ||||||||||||||||||||| Sbjct: 188802 cctctcaactagcgaggtgggactaaacttt 188832 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 454 ctttagtcccggttcgggccacga 477 |||||||||||||||| ||||||| Sbjct: 46956 ctttagtcccggttcgtgccacga 46933 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 gcgaggtgggactaaacttt 315 |||||||||||||||||||| Sbjct: 35074 gcgaggtgggactaaacttt 35093
>gb|AY146587.1| Triticum turgidum subsp. durum BAC 107G22, complete sequence Length = 142018 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 223 gcctgctttagagaggagctcga 245 ||||||||||||||||||||||| Sbjct: 123001 gcctgctttagagaggagctcga 122979 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 agcgaggtgggactaaactt 314 |||||||||||||||||||| Sbjct: 122929 agcgaggtgggactaaactt 122910
>gb|AC144453.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0050A24, complete sequence Length = 142574 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Minus Query: 336 tctttagtcccgggtcgagccacgacccgggattaaaga 374 |||||| |||||| | ||||||||| ||||||||||||| Sbjct: 27480 tctttactcccggttagagccacgaaccgggattaaaga 27442
>gb|AC136523.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0018C06, complete sequence Length = 179695 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Minus Query: 336 tctttagtcccgggtcgagccacgacccgggattaaaga 374 |||||| |||||| | ||||||||| ||||||||||||| Sbjct: 156604 tctttactcccggttagagccacgaaccgggattaaaga 156566
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 411 tctttagtcccgggtcgtggcacggcccgggactgaaggtggtctttagtcccggttcg 469 ||||||||||||||| ||| || |||||||| ||| || ||||||||||||||||| Sbjct: 14251045 tctttagtcccgggttgtgttaccaaccgggactaaagatgatctttagtcccggttcg 14250987 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 448 ggtggtctttagtcccggttc 468 ||||||||||||||||||||| Sbjct: 25498618 ggtggtctttagtcccggttc 25498598 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 caagcgaggtgggactaaac 312 |||||||||||||||||||| Sbjct: 28925252 caagcgaggtgggactaaac 28925233 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 437 ccgggactgaaggtggtctttagtcccggttc 468 |||||||| ||| || |||||||||||||||| Sbjct: 3229148 ccgggactaaagatgatctttagtcccggttc 3229179
>gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 genomic sequence, complete sequence Length = 158714 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 411 tctttagtcccgggtcgtggcacggcccgggactgaaggtggtctttagtcccggttcg 469 ||||||||||||||| ||| || |||||||| ||| || ||||||||||||||||| Sbjct: 274 tctttagtcccgggttgtgttaccaaccgggactaaagatgatctttagtcccggttcg 216
>gb|AC144427.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAb0012F18, complete sequence Length = 122159 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 411 tctttagtcccgggtcgtggcacggcccgggactgaaggtggtctttagtcccggttcg 469 ||||||||||||||| ||| || |||||||| ||| || ||||||||||||||||| Sbjct: 62433 tctttagtcccgggttgtgttaccaaccgggactaaagatgatctttagtcccggttcg 62375
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 336 tctttagtcccgggtcgagccacgacccgggattaaaga 374 ||||||||||||| | ||||||||| |||||| |||||| Sbjct: 3054291 tctttagtcccggttggagccacgaaccgggactaaaga 3054329 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 437 ccgggactgaaggtggtctttagtcccggttcg 469 |||||||| ||| || ||||||||||||||||| Sbjct: 15198542 ccgggactaaagatgatctttagtcccggttcg 15198574 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 437 ccgggactgaaggtggtctttagtcccggttcg 469 |||||||| ||| || ||||||||||||||||| Sbjct: 7569205 ccgggactaaagatgatctttagtcccggttcg 7569237
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Plus Query: 411 tctttagtcccgggtcgtggcacggcccgggactgaaggtggtctttagtcccggttcg 469 ||||||||||||||| ||| || |||||||| ||| || ||||||||||||||||| Sbjct: 18786309 tctttagtcccgggttgtgttaccaaccgggactaaagatgatctttagtcccggttcg 18786367 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Plus Query: 411 tctttagtcccgggtcgtggcacggcccgggactgaaggtggtctttagtcccggttcg 469 ||||||||||||||| ||| || |||||||| ||| || ||||||||||||||||| Sbjct: 18438204 tctttagtcccgggttgtgttaccaaccgggactaaagatgatctttagtcccggttcg 18438262 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 437 ccgggactgaaggtggtctttagtcccggttc 468 ||||||| ||| ||||||||||||||||||| Sbjct: 16362854 ccgggacgaaagatggtctttagtcccggttc 16362823
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 411 tctttagtcccgggtcgtggcacggcccgggactgaaggtggtctttagtcccggttcg 469 ||||||||||||||| ||| || |||||||| ||| || ||||||||||||||||| Sbjct: 20415484 tctttagtcccgggttgtgttaccaaccgggactaaagatgatctttagtcccggttcg 20415426 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 437 ccgggactgaaggtggtctttagtcccggttc 468 |||||||||||| | |||||||||||||||| Sbjct: 27151019 ccgggactgaagatcatctttagtcccggttc 27151050 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 437 ccgggactgaaggtggtctttagtcccggttc 468 |||||||| ||| || |||||||||||||||| Sbjct: 13465147 ccgggactaaagatgatctttagtcccggttc 13465178
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Minus Query: 336 tctttagtcccgggtcgagccacgacccgggattaaaga 374 |||||| |||||| | ||||||||| ||||||||||||| Sbjct: 12073790 tctttactcccggttagagccacgaaccgggattaaaga 12073752 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 36 aattattcacaaattttaaagaat 59 |||||| ||||||||||||||||| Sbjct: 19036180 aattatgcacaaattttaaagaat 19036203 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 437 ccgggactgaaggtggtctttagtcccggttc 468 |||||||| ||| || |||||||||||||||| Sbjct: 15748418 ccgggactaaagatgatctttagtcccggttc 15748449 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 450 tggtctttagtcccggttcg 469 |||||||||||||||||||| Sbjct: 10913476 tggtctttagtcccggttcg 10913495
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 411 tctttagtcccgggtcgtggcacggcccgggactgaaggtggtctttagtcccggttcg 469 ||||||||||||||| ||| || |||||||| ||| || ||||||||||||||||| Sbjct: 14246020 tctttagtcccgggttgtgttaccaaccgggactaaagatgatctttagtcccggttcg 14245962 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 448 ggtggtctttagtcccggttc 468 ||||||||||||||||||||| Sbjct: 25589927 ggtggtctttagtcccggttc 25589907 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 caagcgaggtgggactaaac 312 |||||||||||||||||||| Sbjct: 29016674 caagcgaggtgggactaaac 29016655 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 437 ccgggactgaaggtggtctttagtcccggttc 468 |||||||| ||| || |||||||||||||||| Sbjct: 3229259 ccgggactaaagatgatctttagtcccggttc 3229290
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 336 tctttagtcccgggtcgagccacgacccgggattaaaga 374 ||||||||||||| | ||||||||| |||||| |||||| Sbjct: 15030088 tctttagtcccggttggagccacgaaccgggactaaaga 15030126 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Minus Query: 336 tctttagtcccgggtcgagccacgacccgggattaaaga 374 ||||||||||||| | ||||||||| |||||| |||||| Sbjct: 15030083 tctttagtcccggttggagccacgaaccgggactaaaga 15030045 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 437 ccgggactgaaggtggtctttagtcccggttcg 469 |||||||| ||| || ||||||||||||||||| Sbjct: 14824585 ccgggactaaagatgatctttagtcccggttcg 14824553 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 437 ccgggactgaaggtggtctttagtcccggttc 468 |||||||| ||| || |||||||||||||||| Sbjct: 4407369 ccgggactaaagatgatctttagtcccggttc 4407338
>gb|AE014133.1| Streptococcus mutans UA159, complete genome Length = 2030921 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 156 tatgagaatttatagagaaaatt 178 ||||||||||||||||||||||| Sbjct: 1777475 tatgagaatttatagagaaaatt 1777453
>dbj|AP004816.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0533E11 Length = 150678 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 336 tctttagtcccgggtcgagccacgacccgggattaaaga 374 ||||||||||||| | ||||||||| |||||| |||||| Sbjct: 35869 tctttagtcccggttggagccacgaaccgggactaaaga 35907 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Minus Query: 336 tctttagtcccgggtcgagccacgacccgggattaaaga 374 ||||||||||||| | ||||||||| |||||| |||||| Sbjct: 35864 tctttagtcccggttggagccacgaaccgggactaaaga 35826
>dbj|AP006860.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1026E06 Length = 162784 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Plus Query: 411 tctttagtcccgggtcgtggcacggcccgggactgaaggtggtctttagtcccggttcg 469 ||||||||||||||| ||| || |||||||| ||| || ||||||||||||||||| Sbjct: 69503 tctttagtcccgggttgtgttaccaaccgggactaaagatgatctttagtcccggttcg 69561
>dbj|AP005468.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0020P04 Length = 153894 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 437 ccgggactgaaggtggtctttagtcccggtt 467 |||||||| ||| |||||||||||||||||| Sbjct: 86509 ccgggactaaagatggtctttagtcccggtt 86539
>dbj|AP005387.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0084K06 Length = 177895 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Plus Query: 411 tctttagtcccgggtcgtggcacggcccgggactgaaggtggtctttagtcccggttcg 469 ||||||||||||||| ||| || |||||||| ||| || ||||||||||||||||| Sbjct: 50124 tctttagtcccgggttgtgttaccaaccgggactaaagatgatctttagtcccggttcg 50182
>dbj|AP005761.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1066D09 Length = 183999 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Plus Query: 411 tctttagtcccgggtcgtggcacggcccgggactgaaggtggtctttagtcccggttcg 469 ||||||||||||||| ||| || |||||||| ||| || ||||||||||||||||| Sbjct: 29596 tctttagtcccgggttgtgttaccaaccgggactaaagatgatctttagtcccggttcg 29654
>dbj|AP004573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0678G09 Length = 139220 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 411 tctttagtcccgggtcgtggcacggcccgggactgaaggtggtctttagtcccggttcg 469 ||||||||||||||| ||| || |||||||| ||| || ||||||||||||||||| Sbjct: 124384 tctttagtcccgggttgtgttaccaaccgggactaaagatgatctttagtcccggttcg 124326
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Plus Query: 411 tctttagtcccgggtcgtggcacggcccgggactgaaggtggtctttagtcccggttcg 469 ||||||||||||||| ||| || |||||||| ||| || ||||||||||||||||| Sbjct: 18712536 tctttagtcccgggttgtgttaccaaccgggactaaagatgatctttagtcccggttcg 18712594 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Plus Query: 411 tctttagtcccgggtcgtggcacggcccgggactgaaggtggtctttagtcccggttcg 469 ||||||||||||||| ||| || |||||||| ||| || ||||||||||||||||| Sbjct: 18364430 tctttagtcccgggttgtgttaccaaccgggactaaagatgatctttagtcccggttcg 18364488 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 437 ccgggactgaaggtggtctttagtcccggttc 468 ||||||| ||| ||||||||||||||||||| Sbjct: 16316087 ccgggacgaaagatggtctttagtcccggttc 16316056
>emb|AL954153.6|CNS08CCR Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBb0060B11 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 109192 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 411 tctttagtcccgggtcgtggcacggcccgggactgaaggtggtctttagtcccggttcg 469 ||||||||||||||| ||| || |||||||| ||| || ||||||||||||||||| Sbjct: 33293 tctttagtcccgggttgtgttaccaaccgggactaaagatgatctttagtcccggttcg 33235
>emb|AL662951.3|OSJN00154 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011E07, complete sequence Length = 165094 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 336 tctttagtcccgggtcgagccacgacccgggattaaaga 374 ||||||||||||| | ||||||||| |||||| |||||| Sbjct: 115366 tctttagtcccggttggagccacgaaccgggactaaaga 115404
>emb|AL845344.4|CNS08CB6 Oryza sativa chromosome 12, . BAC OSJNBb0108O14 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 138585 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Plus Query: 411 tctttagtcccgggtcgtggcacggcccgggactgaaggtggtctttagtcccggttcg 469 ||||||||||||||| ||| || |||||||| ||| || ||||||||||||||||| Sbjct: 90103 tctttagtcccgggttgtgttaccaaccgggactaaagatgatctttagtcccggttcg 90161
>gb|AC152975.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNOa0158O07, complete sequence Length = 40515 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 437 ccgggactgaaggtggtctttagtcccggtt 467 |||||||| ||| |||||||||||||||||| Sbjct: 31964 ccgggactaaagatggtctttagtcccggtt 31934
>gb|AE006383.1| Lactococcus lactis subsp. lactis IL1403 section 145 of 218 of the complete genome Length = 11001 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 51 ttaaagaattcaaatttgaaaa 72 |||||||||||||||||||||| Sbjct: 4123 ttaaagaattcaaatttgaaaa 4102
>gb|AC022202.12| Homo sapiens BAC clone RP11-321E8 from 7, complete sequence Length = 95097 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 173 aaaattcaacctaaattcaaag 194 |||||||||||||||||||||| Sbjct: 90757 aaaattcaacctaaattcaaag 90778
>gb|AC182637.3| Pan troglodytes BAC clone CH251-431A15 from chromosome 7, complete sequence Length = 186750 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 173 aaaattcaacctaaattcaaag 194 |||||||||||||||||||||| Sbjct: 167259 aaaattcaacctaaattcaaag 167238
>gb|CP000236.1| Ehrlichia chaffeensis str. Arkansas, complete genome Length = 1176248 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 62 aaatttgaaaactaaatattta 83 |||||||||||||||||||||| Sbjct: 580463 aaatttgaaaactaaatattta 580442
>gb|AC156021.2| Mus musculus BAC clone RP23-256A5 from chromosome 5, complete sequence Length = 217987 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 47 aattttaaagaattcaaatttgaaaa 72 ||||||||||||||||||| |||||| Sbjct: 181609 aattttaaagaattcaaatgtgaaaa 181634
>emb|AL136969.7| Human DNA sequence from clone RP1-207J11 on chromosome 7 Contains ESTs and STSs. Contains two zinc finger protein pseudogenes, a putative novel gene and an HNRPC (heterogeneous nuclear ribonucleoprotein C (C1/C2)) pseudogene, complete sequence Length = 79666 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 173 aaaattcaacctaaattcaaag 194 |||||||||||||||||||||| Sbjct: 41431 aaaattcaacctaaattcaaag 41452
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and SNF2P genes, complete cds; nucellin pseudogene, complete sequence; putative transposase, phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein, and phytochrome P450-like protein genes, complete cds; and unknown genes Length = 438828 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 296 gcgaggtgggactaaactttg 316 ||||||||||||||||||||| Sbjct: 276711 gcgaggtgggactaaactttg 276691 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 agcgaggtgggactaaactt 314 |||||||||||||||||||| Sbjct: 290286 agcgaggtgggactaaactt 290267
>gb|AC148822.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0036K13 map near R3342S, complete sequence Length = 135684 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 437 ccgggactgaaggtggtctttagtcccggttcg 469 |||||||| ||| || ||||||||||||||||| Sbjct: 28285 ccgggactaaagatgatctttagtcccggttcg 28253
>gb|AC144700.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0017H17, complete sequence Length = 156331 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 437 ccgggactgaaggtggtctttagtcccggttcg 469 |||||||| ||| || ||||||||||||||||| Sbjct: 144988 ccgggactaaagatgatctttagtcccggttcg 144956
>gb|DQ158857.1| Bigelowiella natans nucleomorph chromosome 2, partial sequence Length = 134144 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 aattttaaagaattcaaattt 67 ||||||||||||||||||||| Sbjct: 32950 aattttaaagaattcaaattt 32930
>gb|AC114828.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0038L23, complete sequence Length = 124582 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 437 ccgggactgaaggtggtctttagtcccggttcg 469 |||||||| ||| || ||||||||||||||||| Sbjct: 44008 ccgggactaaagatgatctttagtcccggttcg 43976
>gb|AC146893.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone B1107B01, complete sequence Length = 160104 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 437 ccgggactgaaggtggtctttagtcccggttcg 469 |||||||| ||| || ||||||||||||||||| Sbjct: 4611 ccgggactaaagatgatctttagtcccggttcg 4579
>gb|AC153663.6| Mus musculus BAC clone RP23-12J8 from chromosome 12, complete sequence Length = 248166 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 48 attttaaagaattcaaatttgaaaa 72 |||||||||||||||||| |||||| Sbjct: 8168 attttaaagaattcaaatgtgaaaa 8192
>emb|AL445214.7| Human DNA sequence from clone RP11-208F1 on chromosome 9 Contains the 5' end of the INVS gene for inversin and the 3' end of a novel gene (FLJ20287), complete sequence Length = 41150 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 caaaaaatgaaagtaaaatta 40 ||||||||||||||||||||| Sbjct: 36195 caaaaaatgaaagtaaaatta 36215
>gb|AC104615.9| Oryza sativa chromosome 10 BAC OSJNBa0056A15 genomic sequence, complete sequence Length = 150995 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 437 ccgggactgaaggtggtctttagtcccggttcg 469 |||||||| ||| || ||||||||||||||||| Sbjct: 57696 ccgggactaaagatgatctttagtcccggttcg 57728
>gb|DQ071238.1| Bigelowiella natans orf2-292 mRNA, partial sequence; nucleomorph Length = 816 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 aattttaaagaattcaaattt 67 ||||||||||||||||||||| Sbjct: 336 aattttaaagaattcaaattt 356
>emb|AL731634.4|OSJN00276 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0033P05, complete sequence Length = 120635 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 437 ccgggactgaaggtggtctttagtcccggttcg 469 |||||||| ||| || ||||||||||||||||| Sbjct: 91437 ccgggactaaagatgatctttagtcccggttcg 91469
>tpg|BK000937.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M331, complete sequence Length = 14286 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 437 ccgggactgaaggtggtctttagtcccggttcg 469 |||||||| ||| || ||||||||||||||||| Sbjct: 116 ccgggactaaagatgatctttagtcccggttcg 148
>tpg|BK000925.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M321, complete sequence Length = 11664 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 437 ccgggactgaaggtggtctttagtcccggttcg 469 |||||||| ||| || ||||||||||||||||| Sbjct: 11517 ccgggactaaagatgatctttagtcccggttcg 11485
>gb|AC092036.3| Homo sapiens chromosome 3 clone RP11-79C12, complete sequence Length = 137703 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 tttaatagcaaaaaatgaaag 32 ||||||||||||||||||||| Sbjct: 80908 tttaatagcaaaaaatgaaag 80888
>emb|BX511180.7| Zebrafish DNA sequence from clone CH211-221H1 in linkage group 3, complete sequence Length = 155448 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 13 ttaatagcaaaaaatgaaagtaaaa 37 ||||||| ||||||||||||||||| Sbjct: 116817 ttaatagtaaaaaatgaaagtaaaa 116841
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 437 ccgggactgaaggtggtctttagtcccggttcg 469 |||||||| ||| || ||||||||||||||||| Sbjct: 27492158 ccgggactaaagatgatctttagtcccggttcg 27492126 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 437 ccgggactgaaggtggtctttagtcccggttcg 469 |||||||| ||| || ||||||||||||||||| Sbjct: 21934145 ccgggactaaagatgatctttagtcccggttcg 21934113 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 437 ccgggactgaaggtggtctttagtcccggttc 468 |||||||| ||| || |||||||||||||||| Sbjct: 9885930 ccgggactaaagatgatctttagtcccggttc 9885961
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 437 ccgggactgaaggtggtctttagtcccggttcg 469 |||||||| ||| || ||||||||||||||||| Sbjct: 6641380 ccgggactaaagatgatctttagtcccggttcg 6641348 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 437 ccgggactgaaggtggtctttagtcccggttc 468 |||||||| ||| || |||||||||||||||| Sbjct: 6000617 ccgggactaaagatgatctttagtcccggttc 6000586
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 437 ccgggactgaaggtggtctttagtcccggttcg 469 |||||||| ||| || ||||||||||||||||| Sbjct: 10536868 ccgggactaaagatgatctttagtcccggttcg 10536900 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 437 ccgggactgaaggtggtctttagtcccggttc 468 |||||||| ||| || |||||||||||||||| Sbjct: 21759814 ccgggactaaagatgatctttagtcccggttc 21759783 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 437 ccgggactgaaggtggtctttagtcccggttc 468 |||||||| ||| || |||||||||||||||| Sbjct: 11453064 ccgggactaaagatgatctttagtcccggttc 11453095
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 437 ccgggactgaaggtggtctttagtcccggttcg 469 |||||||| ||| || ||||||||||||||||| Sbjct: 20900500 ccgggactaaagatgatctttagtcccggttcg 20900532 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 448 ggtggtctttagtcccggttc 468 ||||||||||||||||||||| Sbjct: 11241168 ggtggtctttagtcccggttc 11241148 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 aaaattattcacaaatttta 53 |||||||||||||||||||| Sbjct: 19917980 aaaattattcacaaatttta 19917999 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 437 ccgggactgaaggtggtctttagtcccggttc 468 |||||||| ||| || |||||||||||||||| Sbjct: 17451839 ccgggactaaagatgatctttagtcccggttc 17451870 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 448 ggtggtctttagtcccggtt 467 |||||||||||||||||||| Sbjct: 3909968 ggtggtctttagtcccggtt 3909987 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 437 ccgggactgaaggtggtctttagtcccggttc 468 |||||||| ||| || |||||||||||||||| Sbjct: 1948014 ccgggactaaagatgatctttagtcccggttc 1947983 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 437 ccgggactgaaggtggtctttagtcccggttc 468 |||||||| ||| |||| |||||||||||||| Sbjct: 857932 ccgggactaaagatggtttttagtcccggttc 857901 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 49 ttttaaagaattcaaatttgaaaa 72 |||| ||||||||||||||||||| Sbjct: 724995 tttttaagaattcaaatttgaaaa 724972
>gb|AC009198.8|AC009198 Drosophila melanogaster, chromosome 2L, region 33B-33C, BAC clone BACR19C12, complete sequence Length = 171134 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 58 attcaaatttgaaaactaaatattt 82 |||||||||||||||| |||||||| Sbjct: 96638 attcaaatttgaaaaccaaatattt 96662
>gb|AC138390.2| Homo sapiens chromosome 3 clone RP11-81N13, complete sequence Length = 158080 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 tttaatagcaaaaaatgaaag 32 ||||||||||||||||||||| Sbjct: 53323 tttaatagcaaaaaatgaaag 53343
>gb|AC135600.3| Oryza sativa chromosome 3 BAC OSJNBb0047K21 genomic sequence, complete sequence Length = 117046 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 448 ggtggtctttagtcccggttc 468 ||||||||||||||||||||| Sbjct: 36234 ggtggtctttagtcccggttc 36254
>dbj|AP003868.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1111_B08 Length = 131184 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 437 ccgggactgaaggtggtctttagtcccggttcg 469 |||||||| ||| || ||||||||||||||||| Sbjct: 78801 ccgggactaaagatgatctttagtcccggttcg 78833
>dbj|AP005678.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1116_F08 Length = 133805 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 437 ccgggactgaaggtggtctttagtcccggttcg 469 |||||||| ||| || ||||||||||||||||| Sbjct: 104473 ccgggactaaagatgatctttagtcccggttcg 104505
>dbj|AP005704.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0448B03 Length = 147748 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 437 ccgggactgaaggtggtctttagtcccggttcg 469 |||||||| ||| || ||||||||||||||||| Sbjct: 137247 ccgggactaaagatgatctttagtcccggttcg 137279
>dbj|AP005773.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0085C03 Length = 188905 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 437 ccgggactgaaggtggtctttagtcccggttcg 469 |||||||| ||| || ||||||||||||||||| Sbjct: 58763 ccgggactaaagatgatctttagtcccggttcg 58795
>dbj|AP005648.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0055I13 Length = 169486 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 437 ccgggactgaaggtggtctttagtcccggttcg 469 |||||||| ||| || ||||||||||||||||| Sbjct: 90388 ccgggactaaagatgatctttagtcccggttcg 90356
>dbj|AP005541.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0436B05 Length = 149754 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 448 ggtggtctttagtcccggttc 468 ||||||||||||||||||||| Sbjct: 76186 ggtggtctttagtcccggttc 76166
>emb|BX255904.6| Zebrafish DNA sequence from clone DKEY-15J16 in linkage group 20, complete sequence Length = 228691 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 44 acaaattttaaagaattcaaatttgaaaa 72 |||| |||||||||||||| ||||||||| Sbjct: 212065 acaatttttaaagaattcacatttgaaaa 212093
>emb|AL732335.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0721B11, complete sequence Length = 43586 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 439 gggactgaaggtggtctttagtcccggtt 467 |||||| ||| |||||||||||||||||| Sbjct: 27099 gggactaaagatggtctttagtcccggtt 27071
>gb|AE003635.2| Drosophila melanogaster chromosome 2L, section 44 of 83 of the complete sequence Length = 308012 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 58 attcaaatttgaaaactaaatattt 82 |||||||||||||||| |||||||| Sbjct: 157609 attcaaatttgaaaaccaaatattt 157633
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 437 ccgggactgaaggtggtctttagtcccggttcg 469 |||||||| ||| || ||||||||||||||||| Sbjct: 6643766 ccgggactaaagatgatctttagtcccggttcg 6643734 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 437 ccgggactgaaggtggtctttagtcccggttc 468 |||||||| ||| || |||||||||||||||| Sbjct: 6001803 ccgggactaaagatgatctttagtcccggttc 6001772
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 437 ccgggactgaaggtggtctttagtcccggttcg 469 |||||||| ||| || ||||||||||||||||| Sbjct: 27516146 ccgggactaaagatgatctttagtcccggttcg 27516114 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 437 ccgggactgaaggtggtctttagtcccggttcg 469 |||||||| ||| || ||||||||||||||||| Sbjct: 22244193 ccgggactaaagatgatctttagtcccggttcg 22244161 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 437 ccgggactgaaggtggtctttagtcccggttc 468 |||||||| ||| || |||||||||||||||| Sbjct: 9957627 ccgggactaaagatgatctttagtcccggttc 9957658
>emb|AL662960.3|OSJN00162 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0021F22, complete sequence Length = 181498 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 437 ccgggactgaaggtggtctttagtcccggttcg 469 |||||||| ||| || ||||||||||||||||| Sbjct: 91678 ccgggactaaagatgatctttagtcccggttcg 91710
>gb|AC132587.5| Mus musculus BAC clone RP24-372N16 from 12, complete sequence Length = 181443 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 48 attttaaagaattcaaatttgaaaa 72 |||||||||||||||||| |||||| Sbjct: 84687 attttaaagaattcaaatgtgaaaa 84711
>gb|AE014828.1| Plasmodium falciparum 3D7 chromosome 14 section 13 of 13 of the complete sequence Length = 273275 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 taaaattattcacaaatttt 52 |||||||||||||||||||| Sbjct: 27922 taaaattattcacaaatttt 27903
>gb|AC134342.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0053E01, complete sequence Length = 180426 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 437 ccgggactgaaggtggtctttagtcccggttc 468 |||||||| ||| || |||||||||||||||| Sbjct: 140522 ccgggactaaagatgatctttagtcccggttc 140553
>gb|AC137593.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0043I04, complete sequence Length = 145191 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 437 ccgggactgaaggtggtctttagtcccggttc 468 |||||||| ||| || |||||||||||||||| Sbjct: 105834 ccgggactaaagatgatctttagtcccggttc 105803
>gb|BC082837.1| Xenopus laevis hypothetical protein MGC82240, mRNA (cDNA clone MGC:80706 IMAGE:5511666), complete cds Length = 9172 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 aaatgaaagtaaaattattc 43 |||||||||||||||||||| Sbjct: 9009 aaatgaaagtaaaattattc 9028
>gb|AF488415.1| Triticum monococcum chromosome 7Am BAC 5K14 complete sequence Length = 168746 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 agcgaggtgggactaaactt 314 |||||||||||||||||||| Sbjct: 140438 agcgaggtgggactaaactt 140419
>gb|AF377946.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone OSJNBa0031O09, complete sequence Length = 161339 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 caagcgaggtgggactaaac 312 |||||||||||||||||||| Sbjct: 79124 caagcgaggtgggactaaac 79143
>gb|AC120528.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0014L17 map C996B, complete sequence Length = 78835 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 437 ccgggactgaaggtggtctttagtcccggttc 468 |||||||| ||| || |||||||||||||||| Sbjct: 36666 ccgggactaaagatgatctttagtcccggttc 36635
>gb|AF125969.1| Caenorhabditis elegans cosmid Y38C9A, complete sequence Length = 19952 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 21 aaaaaatgaaagtaaaattattca 44 ||||||| |||||||||||||||| Sbjct: 11380 aaaaaatcaaagtaaaattattca 11357
>gb|AC125444.9| Mus musculus chromosome 1, clone RP24-499L20, complete sequence Length = 162238 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 aaaaaatgaaagtaaaatta 40 |||||||||||||||||||| Sbjct: 122973 aaaaaatgaaagtaaaatta 122954
>gb|AC132483.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0014C03, complete sequence Length = 143739 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 36 aattattcacaaattttaaagaat 59 |||||| ||||||||||||||||| Sbjct: 48823 aattatgcacaaattttaaagaat 48846
>gb|AC137002.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBb0061M13, complete sequence Length = 174910 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 450 tggtctttagtcccggttcg 469 |||||||||||||||||||| Sbjct: 82680 tggtctttagtcccggttcg 82699
>gb|AC147426.2| Oryza sativa chromosome 3 B1377B10 genomic sequence, complete sequence Length = 184366 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 caagcgaggtgggactaaac 312 |||||||||||||||||||| Sbjct: 108547 caagcgaggtgggactaaac 108528
>gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC 631P8, complete sequence Length = 101158 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 tgctttagagaggagctcga 245 |||||||||||||||||||| Sbjct: 45323 tgctttagagaggagctcga 45304
>ref|NM_014112.2| Homo sapiens trichorhinophalangeal syndrome I (TRPS1), mRNA Length = 9990 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 18 agcaaaaaatgaaagtaaaattat 41 |||||||||||||| ||||||||| Sbjct: 7370 agcaaaaaatgaaaataaaattat 7347
>gb|AC121906.3| Mus musculus BAC clone RP24-176E21 from chromosome 3, complete sequence Length = 171059 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 agcaaaaaatgaaagtaaaa 37 |||||||||||||||||||| Sbjct: 114042 agcaaaaaatgaaagtaaaa 114023
>gb|AC147664.2| Pan troglodytes BAC clone CH251-238C14 from Y, complete sequence Length = 159873 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 13 ttaatagcaaaaaatgaaagtaaa 36 ||||||| |||||||||||||||| Sbjct: 26887 ttaatagaaaaaaatgaaagtaaa 26864
>gb|AC147143.2| Pan troglodytes BAC clone CH251-267L18 from Y, complete sequence Length = 187629 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 13 ttaatagcaaaaaatgaaagtaaa 36 ||||||| |||||||||||||||| Sbjct: 8682 ttaatagaaaaaaatgaaagtaaa 8705
>gb|AC146045.3| Pan troglodytes BAC clone RP43-14B22 from 7, complete sequence Length = 151553 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 aaagaattcaaatttgaaaa 72 |||||||||||||||||||| Sbjct: 46491 aaagaattcaaatttgaaaa 46472
>gb|AC124508.5| Mus musculus BAC clone RP23-433B5 from chromosome 7, complete sequence Length = 188011 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 ttttaaagaattcaaatttg 68 |||||||||||||||||||| Sbjct: 22801 ttttaaagaattcaaatttg 22782
>gb|AC161180.3| Mus musculus chromosome 1, clone RP23-149C6, complete sequence Length = 215599 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 aaaaaatgaaagtaaaatta 40 |||||||||||||||||||| Sbjct: 123671 aaaaaatgaaagtaaaatta 123690
>gb|AC161329.3| Dasypus novemcinctus clone VMRC5-459N3, complete sequence Length = 144874 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 27 tgaaagtaaaattattcacaaattttaaagaa 58 |||||| |||||||||||| | |||||||||| Sbjct: 60399 tgaaagaaaaattattcactacttttaaagaa 60430
>gb|AC091396.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-298M8, complete sequence Length = 237142 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 tgggactaaactttggaatg 321 |||||||||||||||||||| Sbjct: 185709 tgggactaaactttggaatg 185728
>gb|AF178030.3| Homo sapiens chromosome 8 multiple clones map q23.3, complete sequence Length = 310003 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 agcaaaaaatgaaagtaaaattat 41 |||||||||||||| ||||||||| Sbjct: 32649 agcaaaaaatgaaaataaaattat 32672
>gb|AC110249.10| Mus musculus chromosome 14, clone RP23-257O8, complete sequence Length = 204244 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 aaaattcaacctaaattcaa 192 |||||||||||||||||||| Sbjct: 159652 aaaattcaacctaaattcaa 159671
>gb|AC146243.2| Pan troglodytes BAC clone CH251-166E5 from Y, complete sequence Length = 161714 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 13 ttaatagcaaaaaatgaaagtaaa 36 ||||||| |||||||||||||||| Sbjct: 30624 ttaatagaaaaaaatgaaagtaaa 30601
>gb|AC147361.1| Pan troglodytes BAC clone CH251-528H6 from Y, complete sequence Length = 169760 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 13 ttaatagcaaaaaatgaaagtaaa 36 ||||||| |||||||||||||||| Sbjct: 133421 ttaatagaaaaaaatgaaagtaaa 133444
>gb|AC147114.2| Pan troglodytes BAC clone CH251-548O14 from Y, complete sequence Length = 229006 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 13 ttaatagcaaaaaatgaaagtaaa 36 ||||||| |||||||||||||||| Sbjct: 158517 ttaatagaaaaaaatgaaagtaaa 158540
>gb|AC147515.1| Pan troglodytes BAC clone CH251-558O8 from Y, complete sequence Length = 209207 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 13 ttaatagcaaaaaatgaaagtaaa 36 ||||||| |||||||||||||||| Sbjct: 195643 ttaatagaaaaaaatgaaagtaaa 195620
>ref|XM_730025.1| Plasmodium chabaudi chabaudi hypothetical protein (PC301614.00.0) partial mRNA Length = 531 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 15 aatagcaaaaaatgaaagtaaaattatt 42 ||||||||||| || ||||||||||||| Sbjct: 247 aatagcaaaaagtggaagtaaaattatt 220
>ref|XM_730510.1| Plasmodium chabaudi chabaudi hypothetical protein (PC001203.02.0) partial mRNA Length = 753 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 taaaattattcacaaatttt 52 |||||||||||||||||||| Sbjct: 685 taaaattattcacaaatttt 666
>ref|XM_736344.1| Plasmodium chabaudi chabaudi vacuolar ATP synthase (PC301167.00.0) partial mRNA Length = 1152 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 taaaattattcacaaatttt 52 |||||||||||||||||||| Sbjct: 748 taaaattattcacaaatttt 729
>ref|XM_741128.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000419.01.0) partial mRNA Length = 2787 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 15 aatagcaaaaaatgaaagtaaaattatt 42 ||||||||||| || ||||||||||||| Sbjct: 1243 aatagcaaaaagtggaagtaaaattatt 1216
>gb|U50071.1| Caenorhabditis elegans cosmid B0350, complete sequence Length = 42400 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 attcaaatttgaaaactaaa 77 |||||||||||||||||||| Sbjct: 22980 attcaaatttgaaaactaaa 22961
>gb|AC147498.14| Medicago truncatula clone mth2-6f18, complete sequence Length = 135726 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 gaatttatagagaaaattca 180 |||||||||||||||||||| Sbjct: 65020 gaatttatagagaaaattca 65039
>gb|AC142332.1| Pan troglodytes BAC clone RP43-31L22 from Y, complete sequence Length = 153093 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 13 ttaatagcaaaaaatgaaagtaaa 36 ||||||| |||||||||||||||| Sbjct: 131240 ttaatagaaaaaaatgaaagtaaa 131263
>emb|AL732416.3| Human DNA sequence from clone RP11-176N14 on chromosome 1, complete sequence Length = 74965 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 ctaaattcaaagtgaggtca 202 |||||||||||||||||||| Sbjct: 62239 ctaaattcaaagtgaggtca 62220
>emb|AL592047.10| Human DNA sequence from clone RP11-506C15 on chromosome 9 Contains a NADH dehydrogenase 2 (MTND2) pseudogene, complete sequence Length = 153369 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 aaagaattcaaatttgaaaa 72 |||||||||||||||||||| Sbjct: 18258 aaagaattcaaatttgaaaa 18277
>emb|AL356915.19| Human DNA sequence from clone RP11-179F17 on chromosome 13 Contains the 5' end of the FLT3 gene for fms-related tyrosine kinase 3, a novel gene, a eukaryotic translation elongation factor 1 alpha 1 pseudogene, a novel pseudogene and two CpG islands, complete sequence Length = 194520 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 tatgagaatttatagagaaa 175 |||||||||||||||||||| Sbjct: 51857 tatgagaatttatagagaaa 51838
>gb|AF190164.1| Homo sapiens MSTP161 (MST161) mRNA, complete cds Length = 3354 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 18 agcaaaaaatgaaagtaaaattat 41 |||||||||||||| ||||||||| Sbjct: 419 agcaaaaaatgaaaataaaattat 396
>emb|AL161447.20| Human DNA sequence from clone RP11-379P1 on chromosome 9 Contains the 3' end of a novel gene (FLJ21613) similar to rat corneal wound healing related protein (includes FLJ22634), the GOLPH2 gene for golgi phosphoprotein 2 (GP73), a novel pseudogene and a CpG island, complete sequence Length = 160115 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 21 aaaaaatgaaagtaaaattattca 44 ||||||||||||||||||| |||| Sbjct: 17626 aaaaaatgaaagtaaaatttttca 17603
>emb|AL139142.10| Human DNA sequence from clone RP3-436N22 on chromosome 1q24.1-25.3 Contains the PRDX6 gene for peroxiredoxin 6, gene MGC43026, a novel gene, the 3' end of a novel gene (FLJ45235) and two CpG islands, complete sequence Length = 159771 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 aattttaaagaattcaaatttgaa 70 ||||||||| |||||||||||||| Sbjct: 151007 aattttaaataattcaaatttgaa 151030
>emb|AL138787.11| Human DNA sequence from clone RP4-665N4 on chromosome 1p34.1-35.3 Contains the 3' end of the EIF2C3 gene for eukaryotic translation initiation factor 2C, 3, a putative novel transcript, a implantation-associated protein (DKFZp564K142) processed pseudogene, the TEKT2 gene for tektin 2 (testicular), the COL8A2 gene for collagen, type VIII, alpha 2, complete sequence Length = 128133 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 62 aaatttgaaaactaaatatttagt 85 |||||||||||| ||||||||||| Sbjct: 64092 aaatttgaaaacaaaatatttagt 64069
>emb|AL121828.17|HSDJ892M9 Human DNA sequence from clone RP5-892M9 on chromosome 20 Contains GSSs and STSs, complete sequence Length = 61921 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 aaattttaaagaattcaaat 65 |||||||||||||||||||| Sbjct: 31287 aaattttaaagaattcaaat 31306
>emb|AL035694.8|HS33L1 Human DNA sequence from clone RP1-33L1 on chromosome 6q14.1-15 Contains the TBX18 gene for T-box 18 and 2 CpG islands, complete sequence Length = 100209 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 agcaaaaaatgaaagtaaaa 37 |||||||||||||||||||| Sbjct: 93331 agcaaaaaatgaaagtaaaa 93312
>gb|AC010941.6| Homo sapiens chromosome 8, clone RP11-115C6, complete sequence Length = 166129 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 tttatagagaaaattcaacc 183 |||||||||||||||||||| Sbjct: 123337 tttatagagaaaattcaacc 123318
>gb|AC097278.6| Oryza sativa chromosome 10 BAC OSJNBa0040E17 genomic sequence, complete sequence Length = 151673 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 437 ccgggactgaaggtggtctttagtcccggttc 468 |||||||| ||| || |||||||||||||||| Sbjct: 65696 ccgggactaaagatgatctttagtcccggttc 65727
>gb|AC022145.8| Homo sapiens chromosome 19 clone CTD-2579N5, complete sequence Length = 174994 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 aaaattcaacctaaattcaa 192 |||||||||||||||||||| Sbjct: 141814 aaaattcaacctaaattcaa 141833
>gb|AC092329.3| Homo sapiens chromosome 19 clone RP11-15H20, complete sequence Length = 186233 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 aaaattcaacctaaattcaa 192 |||||||||||||||||||| Sbjct: 78108 aaaattcaacctaaattcaa 78127
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 13 ttaatagcaaaaaatgaaagtaaa 36 ||||||| |||||||||||||||| Sbjct: 11399452 ttaatagaaaaaaatgaaagtaaa 11399429 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 13 ttaatagcaaaaaatgaaagtaaa 36 ||||||| |||||||||||||||| Sbjct: 11152603 ttaatagaaaaaaatgaaagtaaa 11152626 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 13 ttaatagcaaaaaatgaaagtaaa 36 ||||||| |||||||||||||||| Sbjct: 3500948 ttaatagaaaaaaatgaaagtaaa 3500925 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 13 ttaatagcaaaaaatgaaagtaaa 36 ||||||| |||||||||||||||| Sbjct: 3184334 ttaatagaaaaaaatgaaagtaaa 3184357
>emb|AL954696.17| Zebrafish DNA sequence from clone CH211-234K4, complete sequence Length = 149858 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 aaaactaaatatttagttgt 88 |||||||||||||||||||| Sbjct: 148000 aaaactaaatatttagttgt 147981
>gb|AC009840.7| Drosophila melanogaster 3L BAC RP98-2B14 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 194790 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 gaaagtaaaattattcacaa 47 |||||||||||||||||||| Sbjct: 69728 gaaagtaaaattattcacaa 69709
>tpg|BK000929.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M344, complete sequence Length = 42547 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 437 ccgggactgaaggtggtctttagtcccggttc 468 |||||||| ||| || |||||||||||||||| Sbjct: 67 ccgggactaaagatgatctttagtcccggttc 98
>emb|CR591796.1| full-length cDNA clone CS0DF008YI01 of Fetal brain of Homo sapiens (human) Length = 1506 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 18 agcaaaaaatgaaagtaaaattat 41 |||||||||||||| ||||||||| Sbjct: 313 agcaaaaaatgaaaataaaattat 290
>dbj|AK021511.1| Homo sapiens cDNA FLJ11449 fis, clone HEMBA1001411 Length = 1587 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 18 agcaaaaaatgaaagtaaaattat 41 |||||||||||||| ||||||||| Sbjct: 404 agcaaaaaatgaaaataaaattat 381
>gb|DP000062.1| Sus scrofa target 117 genomic scaffold Length = 605739 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 taatagcaaaaaatgaaagtaaaa 37 ||||||||||| |||||||||||| Sbjct: 599428 taatagcaaaagatgaaagtaaaa 599451
>ref|NM_145874.1| Drosophila melanogaster CG30154-RA (CG30154), mRNA Length = 494 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 gtaaaattattcacaaattt 51 |||||||||||||||||||| Sbjct: 288 gtaaaattattcacaaattt 269
>dbj|AB161650.1| Cryptomeria japonica DNA, microsatellite locus, clone: CJS0838 Length = 573 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 gaggagctcgacatggttgg 254 |||||||||||||||||||| Sbjct: 198 gaggagctcgacatggttgg 217
>gb|AC104049.4| Homo sapiens chromosome 8, clone CTD-2313B19, complete sequence Length = 129819 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 gtgggactaaactttggaat 320 |||||||||||||||||||| Sbjct: 37856 gtgggactaaactttggaat 37875
>gb|AC090740.5| Homo sapiens chromosome 8, clone RP11-595O22, complete sequence Length = 184838 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 gtgggactaaactttggaat 320 |||||||||||||||||||| Sbjct: 143430 gtgggactaaactttggaat 143449
>gb|AF139201.1|AF139201 Triticum aestivum clone p451 genomic repeat region Length = 4452 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 gcgaggtgggactaaacttt 315 |||||||||||||||||||| Sbjct: 3529 gcgaggtgggactaaacttt 3548 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 gcgaggtgggactaaacttt 315 |||||||||||||||||||| Sbjct: 1794 gcgaggtgggactaaacttt 1813
>gb|AC154180.2| Mus musculus BAC clone RP24-469E6 from chromosome 14, complete sequence Length = 187810 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 aaaattcaacctaaattcaa 192 |||||||||||||||||||| Sbjct: 82984 aaaattcaacctaaattcaa 82965
>gb|AC007308.13| Homo sapiens chromosome 22 clone pac408 map 22q11, complete sequence Length = 215788 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 tttaatagcaaaaaatgaaa 31 |||||||||||||||||||| Sbjct: 100271 tttaatagcaaaaaatgaaa 100290
>gb|AC002470.17| Homo sapiens Chromosome 22q11.2 BAC Clone b135h6 In BCRL2-GGT Region, complete sequence Length = 235395 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 tttaatagcaaaaaatgaaa 31 |||||||||||||||||||| Sbjct: 29116 tttaatagcaaaaaatgaaa 29135
>gb|AC003973.1|AC003973 Homo sapiens DNA from chromosome 19, BAC 33152, complete sequence Length = 165199 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 aaaattcaacctaaattcaa 192 |||||||||||||||||||| Sbjct: 109240 aaaattcaacctaaattcaa 109221
>tpg|BK000332.1| TPA: TPA_exp: Oryza sativa (indica cultivar-group) transposon Rim2-M52, complete sequence Length = 5429 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 437 ccgggactgaaggtggtctttagtcccggttc 468 |||||||| ||| || |||||||||||||||| Sbjct: 137 ccgggactaaagatgatctttagtcccggttc 168
>gb|AC053513.4|AC053513 Homo sapiens BAC clone RP11-359J14 from 12, complete sequence Length = 155958 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 agaattcaaatttgaaaact 74 |||||||||||||||||||| Sbjct: 53347 agaattcaaatttgaaaact 53366
>gb|AF039716.1| Caenorhabditis elegans cosmid W03G9, complete sequence Length = 36571 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 atttgaaaactaaatattta 83 |||||||||||||||||||| Sbjct: 17690 atttgaaaactaaatattta 17671
>gb|AC008362.5|AC008362 Drosophila melanogaster, chromosome 3R, region 90D-90E, BAC clone BACR01C15, complete sequence Length = 153048 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 33 taaaattattcacaaattttaaag 56 ||||||| |||||||||||||||| Sbjct: 13654 taaaatttttcacaaattttaaag 13631
>gb|AC008361.8|AC008361 Drosophila melanogaster, chromosome 3R, region 90D-90D, BAC clone BACR35E22, complete sequence Length = 177471 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 33 taaaattattcacaaattttaaag 56 ||||||| |||||||||||||||| Sbjct: 74209 taaaatttttcacaaattttaaag 74186
>emb|BX005167.12| Mouse DNA sequence from clone RP23-247K19 on chromosome X, complete sequence Length = 212046 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 aaaaatgaaagtaaaattat 41 |||||||||||||||||||| Sbjct: 40033 aaaaatgaaagtaaaattat 40052
>emb|BX784036.6| Zebrafish DNA sequence from clone CH211-223P14 in linkage group 2, complete sequence Length = 162047 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 60 tcaaatttgaaaactaaatattta 83 ||||||||||||| |||||||||| Sbjct: 25698 tcaaatttgaaaattaaatattta 25721
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 437 ccgggactgaaggtggtctttagtcccggttc 468 |||||||| ||| || |||||||||||||||| Sbjct: 3901533 ccgggactaaagatgatctttagtcccggttc 3901564 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 aaatttgaaaactaaatatt 81 |||||||||||||||||||| Sbjct: 256952 aaatttgaaaactaaatatt 256933
>gb|AC008347.2|AC008347 Drosophila melanogaster, chromosome 2R, region 57A-57A, BAC clone BACR03N16, complete sequence Length = 165519 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 gtaaaattattcacaaattt 51 |||||||||||||||||||| Sbjct: 114724 gtaaaattattcacaaattt 114705
>gb|AC146477.3| Pan troglodytes BAC clone CH251-514B8 from chromosome y, complete sequence Length = 170833 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 13 ttaatagcaaaaaatgaaagtaaa 36 ||||||| |||||||||||||||| Sbjct: 13583 ttaatagaaaaaaatgaaagtaaa 13606
>gb|AC119797.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0083G16, complete sequence Length = 145590 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 437 ccgggactgaaggtggtctttagtcccggttc 468 |||||||| ||| || |||||||||||||||| Sbjct: 54021 ccgggactaaagatgatctttagtcccggttc 54052
>dbj|AP002523.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0013F10 Length = 163095 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 437 ccgggactgaaggtggtctttagtcccggttc 468 |||||||| ||| || |||||||||||||||| Sbjct: 23437 ccgggactaaagatgatctttagtcccggttc 23468
>gb|AC124916.3| Homo sapiens chromosome 3 clone RP11-1029M24, complete sequence Length = 207596 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 taatagcaaaaaatgaaagtaaaa 37 ||||||| |||||||||||||||| Sbjct: 137335 taatagctaaaaatgaaagtaaaa 137358
>gb|AC003668.2| Homo sapiens X PAC RP1-233D13 (Roswell Park Cancer Institute Human PAC Library ) complete sequence Length = 145859 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 aaagaattcaaatttgaaaa 72 |||||||||||||||||||| Sbjct: 92995 aaagaattcaaatttgaaaa 93014
>gb|AC104190.3| Homo sapiens chromosome 3 clone RP11-502L5, complete sequence Length = 171181 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 taatagcaaaaaatgaaagtaaaa 37 ||||||| |||||||||||||||| Sbjct: 1720 taatagctaaaaatgaaagtaaaa 1743
>gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, complete sequence Length = 108608 Score = 40.1 bits (20), Expect = 6.5 Identities = 35/40 (87%) Strand = Plus / Minus Query: 412 ctttagtcccgggtcgtggcacggcccgggactgaaggtg 451 |||||||||||| ||||| |||| |||||||| |||||| Sbjct: 78061 ctttagtcccggttcgtgacacgaaccgggactaaaggtg 78022
>gb|AC128737.4| Mus musculus BAC clone RP23-99A8 from chromosome unknown, complete sequence Length = 211960 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 aaaaatgaaagtaaaattat 41 |||||||||||||||||||| Sbjct: 25265 aaaaatgaaagtaaaattat 25246
>dbj|AP005605.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1449_C01 Length = 192857 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 448 ggtggtctttagtcccggtt 467 |||||||||||||||||||| Sbjct: 175185 ggtggtctttagtcccggtt 175204
>dbj|AP004667.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0433E10 Length = 144643 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 aaaattattcacaaatttta 53 |||||||||||||||||||| Sbjct: 86158 aaaattattcacaaatttta 86177
>dbj|AP006526.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0591A03 Length = 147043 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 437 ccgggactgaaggtggtctttagtcccggttc 468 |||||||| ||| || |||||||||||||||| Sbjct: 86752 ccgggactaaagatgatctttagtcccggttc 86783
>dbj|AP004840.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0544B02 Length = 156339 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 437 ccgggactgaaggtggtctttagtcccggttc 468 |||||||| ||| || |||||||||||||||| Sbjct: 90933 ccgggactaaagatgatctttagtcccggttc 90902
>dbj|AP003522.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0036B02 Length = 168253 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 436 cccgggactgaaggtggtctttagtcccggtt 467 ||||||||| ||| || ||||||||||||||| Sbjct: 163262 cccgggactaaagatgatctttagtcccggtt 163231
>dbj|AP005413.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0055N24 Length = 142702 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 436 cccgggactgaaggtggtctttagtcccggtt 467 ||||||||| ||| || ||||||||||||||| Sbjct: 36565 cccgggactaaagatgatctttagtcccggtt 36534
>dbj|AP002863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0005A05 Length = 190834 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 aaatttgaaaactaaatatt 81 |||||||||||||||||||| Sbjct: 8790 aaatttgaaaactaaatatt 8771
>dbj|AP002818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0436E04 Length = 144644 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 aaatttgaaaactaaatatt 81 |||||||||||||||||||| Sbjct: 98622 aaatttgaaaactaaatatt 98603
>dbj|AP004562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0470F10 Length = 185294 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 437 ccgggactgaaggtggtctttagtcccggttc 468 |||||||| ||| |||| |||||||||||||| Sbjct: 20670 ccgggactaaagatggtttttagtcccggttc 20639
>dbj|AP005831.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1123E10 Length = 134641 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 437 ccgggactgaaggtggtctttagtcccggttc 468 |||||||| ||| || |||||||||||||||| Sbjct: 44830 ccgggactaaagatgatctttagtcccggttc 44861
>dbj|AP006459.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0084D17 Length = 143931 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 437 ccgggactgaaggtggtctttagtcccggttc 468 |||||||||||| | |||||||||||||||| Sbjct: 16238 ccgggactgaagatcatctttagtcccggttc 16269
>dbj|BS000051.1| Pan troglodytes chromosome 22 clone:RP43-089B14, map 22, complete sequences Length = 165502 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 aatgaaagtaaaattattca 44 |||||||||||||||||||| Sbjct: 63457 aatgaaagtaaaattattca 63476
>dbj|AP005620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0680F05 Length = 185495 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 437 ccgggactgaaggtggtctttagtcccggttc 468 |||||||| ||| || |||||||||||||||| Sbjct: 73212 ccgggactaaagatgatctttagtcccggttc 73181
>dbj|AP005618.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0509D04 Length = 140666 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 437 ccgggactgaaggtggtctttagtcccggttc 468 |||||||| ||| || |||||||||||||||| Sbjct: 97049 ccgggactaaagatgatctttagtcccggttc 97018
>dbj|AP005657.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0427G12 Length = 185545 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 437 ccgggactgaaggtggtctttagtcccggttc 468 |||||||| ||| |||| |||||||||||||| Sbjct: 157152 ccgggactaaagatggtttttagtcccggttc 157121 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 49 ttttaaagaattcaaatttgaaaa 72 |||| ||||||||||||||||||| Sbjct: 24215 tttttaagaattcaaatttgaaaa 24192
>dbj|AK129397.1| Mus musculus mRNA for mKIAA1573 protein Length = 3972 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 attcacaaattttaaagaat 59 |||||||||||||||||||| Sbjct: 3805 attcacaaattttaaagaat 3786
>dbj|AP004465.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0690C12 Length = 139693 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 437 ccgggactgaaggtggtctttagtcccggttc 468 |||||||| ||| || |||||||||||||||| Sbjct: 62684 ccgggactaaagatgatctttagtcccggttc 62715
>gb|AF183810.1|AF183810 Homo sapiens zinc finger transcription factor TRPS1 mRNA, complete cds Length = 10011 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 18 agcaaaaaatgaaagtaaaattat 41 |||||||||||||| ||||||||| Sbjct: 7391 agcaaaaaatgaaaataaaattat 7368
>gb|AC154858.2| Mus musculus BAC clone RP23-12P20 from 14, complete sequence Length = 180592 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 20 caaaaaatgaaagtaaaattattcacaaattttaaa 55 |||||||| ||| |||| ||||||||||||||||| Sbjct: 178076 caaaaaattaaaataaatatattcacaaattttaaa 178041
>gb|AE003720.3| Drosophila melanogaster chromosome 3R, section 58 of 118 of the complete sequence Length = 228842 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 33 taaaattattcacaaattttaaag 56 ||||||| |||||||||||||||| Sbjct: 59085 taaaatttttcacaaattttaaag 59062
>gb|AE003791.5| Drosophila melanogaster chromosome 2R, section 59 of 73 of the complete sequence Length = 263535 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 gtaaaattattcacaaattt 51 |||||||||||||||||||| Sbjct: 19613 gtaaaattattcacaaattt 19594
>gb|AE003591.4| Drosophila melanogaster chromosome 3L, section 72 of 83 of the complete sequence Length = 301136 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 gaaagtaaaattattcacaa 47 |||||||||||||||||||| Sbjct: 119020 gaaagtaaaattattcacaa 119001
>dbj|AP001676.1| Homo sapiens genomic DNA, chromosome 21q, section 20/105 Length = 340000 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 aatgaaagtaaaattattca 44 |||||||||||||||||||| Sbjct: 653 aatgaaagtaaaattattca 672
>dbj|AP001675.1| Homo sapiens genomic DNA, chromosome 21q, section 19/105 Length = 340000 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 aatgaaagtaaaattattca 44 |||||||||||||||||||| Sbjct: 339653 aatgaaagtaaaattattca 339672
>emb|AL713907.3|CNS07YQ7 Oryza sativa chromosome 12, . BAC OJ1057_E03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127989 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 437 ccgggactgaaggtggtctttagtcccggttc 468 ||||||| ||| ||||||||||||||||||| Sbjct: 89537 ccgggacgaaagatggtctttagtcccggttc 89568
>gb|AE017226.1| Treponema denticola ATCC 35405, complete genome Length = 2843201 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 agcaaaaaatgaaagtaaaa 37 |||||||||||||||||||| Sbjct: 626582 agcaaaaaatgaaagtaaaa 626601
>gb|AC116952.4| Mus musculus BAC clone RP23-104A7 from 14, complete sequence Length = 210088 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 20 caaaaaatgaaagtaaaattattcacaaattttaaa 55 |||||||| ||| |||| ||||||||||||||||| Sbjct: 20455 caaaaaattaaaataaatatattcacaaattttaaa 20420
>emb|CT009565.10| M.truncatula DNA sequence from clone MTH2-173F9 on chromosome 3, complete sequence Length = 151325 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 aaaaaatgaaagtaaaatta 40 |||||||||||||||||||| Sbjct: 46127 aaaaaatgaaagtaaaatta 46108
>gb|U39847.1|CEU39847 Caenorhabditis elegans AO13 ankyrin, AO66 ankyrin and AO49 ankyrin (unc-44) gene, three alternatively spliced forms, complete cds Length = 31002 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 attcaaatttgaaaactaaa 77 |||||||||||||||||||| Sbjct: 12675 attcaaatttgaaaactaaa 12656
>emb|AL691503.6| Mouse DNA sequence from clone RP23-47N17 on chromosome X, complete sequence Length = 219711 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 agtaaaattattcacaaatt 50 |||||||||||||||||||| Sbjct: 128764 agtaaaattattcacaaatt 128745
>emb|AL670223.7| Mouse DNA sequence from clone RP23-29O24 on chromosome 4, complete sequence Length = 184644 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 attcacaaattttaaagaat 59 |||||||||||||||||||| Sbjct: 122216 attcacaaattttaaagaat 122197
>dbj|AP000958.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2 clone:B794P4, LL56-APP region, complete sequence Length = 50974 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 aatgaaagtaaaattattca 44 |||||||||||||||||||| Sbjct: 32008 aatgaaagtaaaattattca 32027 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,339,809 Number of Sequences: 3902068 Number of extensions: 4339809 Number of successful extensions: 153508 Number of sequences better than 10.0: 194 Number of HSP's better than 10.0 without gapping: 216 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 140914 Number of HSP's gapped (non-prelim): 12562 length of query: 484 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 462 effective length of database: 17,147,199,772 effective search space: 7922006294664 effective search space used: 7922006294664 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
