ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd27a08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome... 109 8e-21
2gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome... 109 8e-21
3dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 109 8e-21
4dbj|AK104366.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 8e-21
5dbj|AK104199.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 8e-21
6dbj|AK070043.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 8e-21
7gb|BT016325.1| Zea mays clone Contig158 mRNA sequence 94 5e-16
8gb|AY104589.1| Zea mays PCO067801 mRNA sequence 94 5e-16
9ref|XM_367013.1| Magnaporthe grisea 70-15 chromosome VII hypothe... 54 4e-04
10ref|XM_748615.1| Aspergillus fumigatus Af293 hypothetical protei... 50 0.006
11emb|AJ879936.2| Capsicum chinense mRNA for putative receptor ass... 50 0.006
12ref|NM_116196.1| Arabidopsis thaliana glutamate binding AT3G6331... 48 0.025
13gb|BT020236.1| Arabidopsis thaliana At3g63310 gene, complete cds 48 0.025
14emb|AL163818.1|ATMAA21 Arabidopsis thaliana DNA chromosome 3, P1... 48 0.025
15emb|AL138648.2|ATF16M2 Arabidopsis thaliana DNA chromosome 3, BA... 48 0.025
16gb|BT021132.1| Arabidopsis thaliana At3g63310 gene, complete cds 48 0.025
17emb|BX470168.7| Zebrafish DNA sequence from clone CH211-288L20 i... 46 0.097
18emb|BX322791.7| Zebrafish DNA sequence from clone RP71-55E12, co... 46 0.097
19emb|BX825703.1|CNS0A67U Arabidopsis thaliana Full-length cDNA Co... 46 0.097
20gb|BT014369.1| Lycopersicon esculentum clone 133657R, mRNA sequence 44 0.38
21gb|BT014225.1| Lycopersicon esculentum clone 133420R, mRNA sequence 44 0.38
22gb|AC159332.11| Mus musculus 6 BAC RP23-413D8 (Roswell Park Canc... 44 0.38
23emb|CR388214.5| Zebrafish DNA sequence from clone CH211-269E4 in... 44 0.38
24emb|AL954324.10| Zebrafish DNA sequence from clone DKEY-35P13 in... 42 1.5
25ref|XM_389598.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 42 1.5
26emb|BX324123.4| Zebrafish DNA sequence from clone DKEY-106L3 in ... 42 1.5
27gb|DQ397838.1| Cenarchaeum symbiosum clone C03H05, complete sequ... 42 1.5
28gb|AC162030.8| Medicago truncatula clone mth2-178b21, complete s... 42 1.5
29dbj|AB194635.1| Leek yellow stripe virus gene for coat protein, ... 42 1.5
30dbj|AB194634.1| Leek yellow stripe virus gene for coat protein, ... 42 1.5
31gb|AC007156.2|AC007156 Homo sapiens chromosome 18, clone hRPK.41... 42 1.5
32dbj|AP005271.4| Homo sapiens genomic DNA, chromosome 18 clone:RP... 42 1.5
33gb|AC138769.4| Mus musculus chromosome 18 clone RP23-235B1, comp... 40 6.0
34emb|BX294155.1| Pirellula sp. strain 1 complete genome; segment ... 40 6.0
35emb|AL672211.7| Zebrafish DNA sequence from clone BUSM1-6A2 in l... 40 6.0
36emb|CR450720.5| Zebrafish DNA sequence from clone DKEYP-51F11 in... 40 6.0
37gb|AF097907.1| Rana catesbeiana myosin heavy chain (MHC-4) mRNA,... 40 6.0
38gb|DQ397875.1| Cenarchaeum symbiosum clone C07F02, complete sequ... 40 6.0
39gb|DQ397873.1| Cenarchaeum symbiosum clone C13A11, complete sequ... 40 6.0
40gb|DQ397858.1| Cenarchaeum symbiosum clone C05G02, complete sequ... 40 6.0
41gb|DQ397630.1| Cenarchaeum symbiosum clone C01C08, complete sequ... 40 6.0
42gb|DQ060521.1| Bean yellow mosaic virus polyprotein mRNA, partia... 40 6.0
43emb|BX276115.11| Zebrafish DNA sequence from clone DKEY-274M17 i... 40 6.0
44emb|BX465842.5| Zebrafish DNA sequence from clone DKEY-164P3 in ... 40 6.0
45gb|AC026736.4|AC026736 Homo sapiens chromosome 5 clone CTD-2350M... 40 6.0
46emb|BX957241.13| Zebrafish DNA sequence from clone CH211-197N10 ... 40 6.0
47emb|BX276097.12| Zebrafish DNA sequence from clone DKEY-97C6 in ... 40 6.0
48emb|AL954739.9| Zebrafish DNA sequence from clone CH211-192K9 in... 40 6.0
49emb|BX004994.6| Zebrafish DNA sequence from clone DKEY-24J15 in ... 40 6.0
50emb|BX001024.7| Zebrafish DNA sequence from clone CH211-42I24, c... 40 6.0 
>gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0035J16,
              complete sequence
          Length = 170233

 Score =  109 bits (55), Expect = 8e-21
 Identities = 86/95 (90%), Gaps = 1/95 (1%)
 Strand = Plus / Minus

                                                                          
Query: 13     tctacgacactgagnaacttgataaagcgccacacttatgacgagtacatctgggcttct 72
              |||||||||| ||| ||||||||||||||||||||||||||||| ||||| ||||| |||
Sbjct: 147894 tctacgacacagag-aacttgataaagcgccacacttatgacgactacatttgggcctct 147836

                                                 
Query: 73     gttgaactttacctcgacatcctcaacctgttcct 107
              ||||| || ||||| |||||||||||| |||||||
Sbjct: 147835 gttgagctctaccttgacatcctcaacttgttcct 147801
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>gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0006J12, complete sequence
          Length = 157069

 Score =  109 bits (55), Expect = 8e-21
 Identities = 86/95 (90%), Gaps = 1/95 (1%)
 Strand = Plus / Minus

                                                                         
Query: 13    tctacgacactgagnaacttgataaagcgccacacttatgacgagtacatctgggcttct 72
             |||||||||| ||| ||||||||||||||||||||||||||||| ||||| ||||| |||
Sbjct: 45257 tctacgacacagag-aacttgataaagcgccacacttatgacgactacatttgggcctct 45199

                                                
Query: 73    gttgaactttacctcgacatcctcaacctgttcct 107
             ||||| || ||||| |||||||||||| |||||||
Sbjct: 45198 gttgagctctaccttgacatcctcaacttgttcct 45164
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  109 bits (55), Expect = 8e-21
 Identities = 86/95 (90%), Gaps = 1/95 (1%)
 Strand = Plus / Minus

                                                                            
Query: 13       tctacgacactgagnaacttgataaagcgccacacttatgacgagtacatctgggcttct 72
                |||||||||| ||| ||||||||||||||||||||||||||||| ||||| ||||| |||
Sbjct: 19444545 tctacgacacagag-aacttgataaagcgccacacttatgacgactacatttgggcctct 19444487

                                                   
Query: 73       gttgaactttacctcgacatcctcaacctgttcct 107
                ||||| || ||||| |||||||||||| |||||||
Sbjct: 19444486 gttgagctctaccttgacatcctcaacttgttcct 19444452
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>dbj|AK104366.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-D07, full
           insert sequence
          Length = 1060

 Score =  109 bits (55), Expect = 8e-21
 Identities = 86/95 (90%), Gaps = 1/95 (1%)
 Strand = Plus / Plus

                                                                       
Query: 13  tctacgacactgagnaacttgataaagcgccacacttatgacgagtacatctgggcttct 72
           |||||||||| ||| ||||||||||||||||||||||||||||| ||||| ||||| |||
Sbjct: 739 tctacgacacagag-aacttgataaagcgccacacttatgacgactacatttgggcctct 797

                                              
Query: 73  gttgaactttacctcgacatcctcaacctgttcct 107
           ||||| || ||||| |||||||||||| |||||||
Sbjct: 798 gttgagctctaccttgacatcctcaacttgttcct 832
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>dbj|AK104199.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-A08, full
           insert sequence
          Length = 1060

 Score =  109 bits (55), Expect = 8e-21
 Identities = 86/95 (90%), Gaps = 1/95 (1%)
 Strand = Plus / Plus

                                                                       
Query: 13  tctacgacactgagnaacttgataaagcgccacacttatgacgagtacatctgggcttct 72
           |||||||||| ||| ||||||||||||||||||||||||||||| ||||| ||||| |||
Sbjct: 739 tctacgacacagag-aacttgataaagcgccacacttatgacgactacatttgggcctct 797

                                              
Query: 73  gttgaactttacctcgacatcctcaacctgttcct 107
           ||||| || ||||| |||||||||||| |||||||
Sbjct: 798 gttgagctctaccttgacatcctcaacttgttcct 832
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>dbj|AK070043.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039E14, full
           insert sequence
          Length = 1106

 Score =  109 bits (55), Expect = 8e-21
 Identities = 86/95 (90%), Gaps = 1/95 (1%)
 Strand = Plus / Plus

                                                                       
Query: 13  tctacgacactgagnaacttgataaagcgccacacttatgacgagtacatctgggcttct 72
           |||||||||| ||| ||||||||||||||||||||||||||||| ||||| ||||| |||
Sbjct: 740 tctacgacacagag-aacttgataaagcgccacacttatgacgactacatttgggcctct 798

                                              
Query: 73  gttgaactttacctcgacatcctcaacctgttcct 107
           ||||| || ||||| |||||||||||| |||||||
Sbjct: 799 gttgagctctaccttgacatcctcaacttgttcct 833
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>gb|BT016325.1| Zea mays clone Contig158 mRNA sequence
          Length = 1172

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 99/115 (86%), Gaps = 1/115 (0%)
 Strand = Plus / Plus

                                                                       
Query: 15  tacgacactgagnaacttgataaagcgccacacttatgacgagtacatctgggcttctgt 74
           |||||||| ||| ||| |||| ||||||||||| || ||||||||||||||||| || ||
Sbjct: 749 tacgacaccgag-aacctgatcaagcgccacacctacgacgagtacatctgggcgtcggt 807

                                                                  
Query: 75  tgaactttacctcgacatcctcaacctgttcctcaccatcctacagatgctcagg 129
           ||  || |||||||||||||| |||||||||||| |||||||  | |||||||||
Sbjct: 808 tgggctgtacctcgacatcctgaacctgttcctctccatcctgaacatgctcagg 862
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>gb|AY104589.1| Zea mays PCO067801 mRNA sequence
          Length = 1197

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 99/115 (86%), Gaps = 1/115 (0%)
 Strand = Plus / Plus

                                                                       
Query: 15  tacgacactgagnaacttgataaagcgccacacttatgacgagtacatctgggcttctgt 74
           |||||||| ||| ||| |||| ||||||||||| || ||||||||||||||||| || ||
Sbjct: 795 tacgacaccgag-aacctgatcaagcgccacacctacgacgagtacatctgggcgtcggt 853

                                                                  
Query: 75  tgaactttacctcgacatcctcaacctgttcctcaccatcctacagatgctcagg 129
           ||  || |||||||||||||| |||||||||||| |||||||  | |||||||||
Sbjct: 854 tgggctgtacctcgacatcctgaacctgttcctctccatcctgaacatgctcagg 908
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>ref|XM_367013.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein
           (MG03089.4) partial mRNA
          Length = 849

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 82  tacctcgacatcctcaacctgttcctcaccatcct 116
           |||||||||||| |||||||||||||| |||||||
Sbjct: 784 tacctcgacatcatcaacctgttcctcgccatcct 818
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>ref|XM_748615.1| Aspergillus fumigatus Af293 hypothetical protein (Afu5g09310)
           partial mRNA
          Length = 846

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 79  ctttacctcgacatcctcaacctgttcct 107
           |||||||| ||||||||||||||||||||
Sbjct: 745 ctttacctggacatcctcaacctgttcct 773
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>emb|AJ879936.2| Capsicum chinense mRNA for putative receptor associated protein
           (ORF1)
          Length = 1037

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 37  aagcgccacacttatgacgagtacatctgggct 69
           |||||| |||||||||| |||||||||||||||
Sbjct: 724 aagcgctacacttatgatgagtacatctgggct 756
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>ref|NM_116196.1| Arabidopsis thaliana glutamate binding AT3G63310 mRNA, complete cds
          Length = 720

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                           
Query: 28  aacttgataaagcgccacacttatgacgagtacatctgggcttctgtt 75
           |||||||| ||| | ||| | ||||||||||||||||||||| |||||
Sbjct: 604 aacttgatcaagaggcactcctatgacgagtacatctgggctgctgtt 651
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>gb|BT020236.1| Arabidopsis thaliana At3g63310 gene, complete cds
          Length = 892

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                           
Query: 28  aacttgataaagcgccacacttatgacgagtacatctgggcttctgtt 75
           |||||||| ||| | ||| | ||||||||||||||||||||| |||||
Sbjct: 694 aacttgatcaagaggcactcctatgacgagtacatctgggctgctgtt 741
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>emb|AL163818.1|ATMAA21 Arabidopsis thaliana DNA chromosome 3, P1 clone MAA21 (ESSA project)
          Length = 79153

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                             
Query: 28    aacttgataaagcgccacacttatgacgagtacatctgggcttctgtt 75
             |||||||| ||| | ||| | ||||||||||||||||||||| |||||
Sbjct: 10354 aacttgatcaagaggcactcctatgacgagtacatctgggctgctgtt 10307
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>emb|AL138648.2|ATF16M2 Arabidopsis thaliana DNA chromosome 3, BAC clone F16M2
          Length = 75106

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                             
Query: 28    aacttgataaagcgccacacttatgacgagtacatctgggcttctgtt 75
             |||||||| ||| | ||| | ||||||||||||||||||||| |||||
Sbjct: 55737 aacttgatcaagaggcactcctatgacgagtacatctgggctgctgtt 55690
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>gb|BT021132.1| Arabidopsis thaliana At3g63310 gene, complete cds
          Length = 720

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                           
Query: 28  aacttgataaagcgccacacttatgacgagtacatctgggcttctgtt 75
           |||||||| ||| | ||| | ||||||||||||||||||||| |||||
Sbjct: 604 aacttgatcaagaggcactcctatgacgagtacatctgggctgctgtt 651
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>emb|BX470168.7| Zebrafish DNA sequence from clone CH211-288L20 in linkage group 6,
              complete sequence
          Length = 148605

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 257    tgccatcatccagagatgaggcc 279
              |||||||||||||||||||||||
Sbjct: 134350 tgccatcatccagagatgaggcc 134372
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>emb|BX322791.7| Zebrafish DNA sequence from clone RP71-55E12, complete sequence
          Length = 127643

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 257    tgccatcatccagagatgaggcc 279
              |||||||||||||||||||||||
Sbjct: 113283 tgccatcatccagagatgaggcc 113305
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>emb|BX825703.1|CNS0A67U Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL57ZF05 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 998

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 49  tatgacgagtacatctgggcttctgtt 75
           ||||||||||||||||||||| |||||
Sbjct: 743 tatgacgagtacatctgggctgctgtt 769
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>gb|BT014369.1| Lycopersicon esculentum clone 133657R, mRNA sequence
          Length = 1241

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 37  aagcgccacacttatgacgagtacatctgggcttctgt 74
           |||||| ||||||| || ||||||||||||||| ||||
Sbjct: 643 aagcgctacacttacgatgagtacatctgggctgctgt 680
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>gb|BT014225.1| Lycopersicon esculentum clone 133420R, mRNA sequence
          Length = 1133

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 44  acacttatgacgagtacatctgggct 69
           |||||||||| |||||||||||||||
Sbjct: 704 acacttatgatgagtacatctgggct 729
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>gb|AC159332.11| Mus musculus 6 BAC RP23-413D8 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 208808

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 265    tccagagatgaggccaaagtac 286
              ||||||||||||||||||||||
Sbjct: 115415 tccagagatgaggccaaagtac 115436
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>emb|CR388214.5| Zebrafish DNA sequence from clone CH211-269E4 in linkage group 21,
             complete sequence
          Length = 138978

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 335   ttaaactgcaaacaatcagtga 356
             ||||||||||||||||||||||
Sbjct: 29921 ttaaactgcaaacaatcagtga 29900
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>emb|AL954324.10| Zebrafish DNA sequence from clone DKEY-35P13 in linkage group 17,
             complete sequence
          Length = 69320

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 332   ttgttaaactgcaaacaatcagtga 356
             ||||||| |||||||||||||||||
Sbjct: 60958 ttgttaatctgcaaacaatcagtga 60982
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>ref|XM_389598.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG09422.1)
           partial mRNA
          Length = 831

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 79  ctttacctcgacatcctcaacctgttcct 107
           ||||||||||||||| ||||||| |||||
Sbjct: 763 ctttacctcgacatcatcaacctcttcct 791
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>emb|BX324123.4| Zebrafish DNA sequence from clone DKEY-106L3 in linkage group 10,
             complete sequence
          Length = 158061

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 333   tgttaaactgcaaacaatcagtgat 357
             |||||||||| ||||||||||||||
Sbjct: 69381 tgttaaactgtaaacaatcagtgat 69405
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>gb|DQ397838.1| Cenarchaeum symbiosum clone C03H05, complete sequence
          Length = 39721

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 70    tctgttgaactttacctcgac 90
             |||||||||||||||||||||
Sbjct: 32796 tctgttgaactttacctcgac 32776
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>gb|AC162030.8| Medicago truncatula clone mth2-178b21, complete sequence
          Length = 85986

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 78/96 (81%), Gaps = 1/96 (1%)
 Strand = Plus / Minus

                                                                         
Query: 12    gtctacgacactgagnaacttgataaagcgccacacttatgacgagtacatctgggcttc 71
             ||||||||||||||  | || ||| |||||||| |||||||| || |||||  |||| ||
Sbjct: 71492 gtctacgacactgacaatct-gatcaagcgccatacttatgatgaatacattggggcctc 71434

                                                 
Query: 72    tgttgaactttacctcgacatcctcaacctgttcct 107
             |||    ||||| |||||||| || |||||||||||
Sbjct: 71433 tgtcactctttatctcgacattctgaacctgttcct 71398
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>dbj|AB194635.1| Leek yellow stripe virus gene for coat protein, partial cds,
           isolate: Korea:Import.#2
          Length = 864

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 95  tcaacctgttcctcaccatcc 115
           |||||||||||||||||||||
Sbjct: 488 tcaacctgttcctcaccatcc 468
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>dbj|AB194634.1| Leek yellow stripe virus gene for coat protein, partial cds,
           isolate: Korea:Import.#1
          Length = 864

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 95  tcaacctgttcctcaccatcc 115
           |||||||||||||||||||||
Sbjct: 488 tcaacctgttcctcaccatcc 468
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>gb|AC007156.2|AC007156 Homo sapiens chromosome 18, clone hRPK.419_J_16, complete sequence
          Length = 203591

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 260    catcatccagagatgaggcca 280
              |||||||||||||||||||||
Sbjct: 154427 catcatccagagatgaggcca 154447
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>dbj|AP005271.4| Homo sapiens genomic DNA, chromosome 18 clone:RP11-752I5, complete
              sequence
          Length = 200108

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 260    catcatccagagatgaggcca 280
              |||||||||||||||||||||
Sbjct: 116988 catcatccagagatgaggcca 116968
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>gb|AC138769.4| Mus musculus chromosome 18 clone RP23-235B1, complete sequence
          Length = 189897

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 183    ggtcatatgtccaaccttta 202
              ||||||||||||||||||||
Sbjct: 143154 ggtcatatgtccaaccttta 143135
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>emb|BX294155.1| Pirellula sp. strain 1 complete genome; segment 23/24
          Length = 306550

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 384   gtcgtgttgtttgtccccttctca 407
             |||||||||||||||||| |||||
Sbjct: 14054 gtcgtgttgtttgtccccatctca 14031
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>emb|AL672211.7| Zebrafish DNA sequence from clone BUSM1-6A2 in linkage group 11
             Contains a novel gene similar to OGFR, the fez gene for
             forebrain embryonic zinc-finger protein, part of a novel
             gene for a protein similar to Ca2+ dependent activator and
             four CpG islands, complete sequence
          Length = 80828

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 333   tgttaaactgcaaacaatcagtga 356
             |||||||||| |||||||||||||
Sbjct: 46625 tgttaaactgtaaacaatcagtga 46648
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>emb|CR450720.5| Zebrafish DNA sequence from clone DKEYP-51F11 in linkage group 2,
             complete sequence
          Length = 200950

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 333   tgttaaactgcaaacaatcagtga 356
             |||||||||| |||||||||||||
Sbjct: 81696 tgttaaactgtaaacaatcagtga 81673
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>gb|AF097907.1| Rana catesbeiana myosin heavy chain (MHC-4) mRNA, partial cds
          Length = 2584

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 93  cctcaacctgttcctcaccatcct 116
           ||||||||||||||||| ||||||
Sbjct: 890 cctcaacctgttcctcagcatcct 867
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>gb|DQ397875.1| Cenarchaeum symbiosum clone C07F02, complete sequence
          Length = 41724

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 71  ctgttgaactttacctcgac 90
           ||||||||||||||||||||
Sbjct: 693 ctgttgaactttacctcgac 674
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>gb|DQ397873.1| Cenarchaeum symbiosum clone C13A11, complete sequence
          Length = 40499

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 71    ctgttgaactttacctcgac 90
             ||||||||||||||||||||
Sbjct: 33788 ctgttgaactttacctcgac 33807
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>gb|DQ397858.1| Cenarchaeum symbiosum clone C05G02, complete sequence
          Length = 39265

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 71   ctgttgaactttacctcgac 90
            ||||||||||||||||||||
Sbjct: 8783 ctgttgaactttacctcgac 8802
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>gb|DQ397630.1| Cenarchaeum symbiosum clone C01C08, complete sequence
          Length = 44451

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 71    ctgttgaactttacctcgac 90
             ||||||||||||||||||||
Sbjct: 41006 ctgttgaactttacctcgac 41025
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>gb|DQ060521.1| Bean yellow mosaic virus polyprotein mRNA, partial cds
          Length = 1630

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 96   caacctgttcctcaccatcc 115
            ||||||||||||||||||||
Sbjct: 1081 caacctgttcctcaccatcc 1062
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>emb|BX276115.11| Zebrafish DNA sequence from clone DKEY-274M17 in linkage group 11,
              complete sequence
          Length = 175216

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 333    tgttaaactgcaaacaatcagtga 356
              |||||||||| |||||||||||||
Sbjct: 169445 tgttaaactgtaaacaatcagtga 169422
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>emb|BX465842.5| Zebrafish DNA sequence from clone DKEY-164P3 in linkage group 3, complete
              sequence
          Length = 194224

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 333    tgttaaactgcaaacaatcagtga 356
              ||||||| ||||||||||||||||
Sbjct: 182395 tgttaaattgcaaacaatcagtga 182372
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>gb|AC026736.4|AC026736 Homo sapiens chromosome 5 clone CTD-2350M8, complete sequence
          Length = 108661

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 278   ccaaagtacaaccaatatgt 297
             ||||||||||||||||||||
Sbjct: 99474 ccaaagtacaaccaatatgt 99455
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>emb|BX957241.13| Zebrafish DNA sequence from clone CH211-197N10 in linkage group 19,
              complete sequence
          Length = 199001

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 333    tgttaaactgcaaacaatcagtga 356
              |||||||||| |||||||||||||
Sbjct: 161421 tgttaaactgtaaacaatcagtga 161444
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>emb|BX276097.12| Zebrafish DNA sequence from clone DKEY-97C6 in linkage group 20,
             complete sequence
          Length = 128871

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 333   tgttaaactgcaaacaatcagtga 356
             |||||||||| |||||||||||||
Sbjct: 89731 tgttaaactgtaaacaatcagtga 89708
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>emb|AL954739.9| Zebrafish DNA sequence from clone CH211-192K9 in linkage group 20,
             complete sequence
          Length = 154604

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 333   tgttaaactgcaaacaatcagtga 356
             |||||||||| |||||||||||||
Sbjct: 18007 tgttaaactgtaaacaatcagtga 17984
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>emb|BX004994.6| Zebrafish DNA sequence from clone DKEY-24J15 in linkage group 22,
             complete sequence
          Length = 211945

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 333   tgttaaactgcaaacaatcagtga 356
             |||||||||| |||||||||||||
Sbjct: 73639 tgttaaactgtaaacaatcagtga 73616
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>emb|BX001024.7| Zebrafish DNA sequence from clone CH211-42I24, complete sequence
          Length = 169194

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 333  tgttaaactgcaaacaatcagtga 356
            |||||||||||| |||||||||||
Sbjct: 2578 tgttaaactgcacacaatcagtga 2555


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,760,267
Number of Sequences: 3902068
Number of extensions: 2760267
Number of successful extensions: 58349
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 58261
Number of HSP's gapped (non-prelim): 88
length of query: 445
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 423
effective length of database: 17,147,199,772
effective search space: 7253265503556
effective search space used: 7253265503556
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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