ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd27a07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DCNL1_MOUSE (Q9QZ73) DCN1-like protein 1 (Defective in cullin ne... 124 2e-28
2DCNL1_HUMAN (Q96GG9) DCN1-like protein 1 (Defective in cullin ne... 124 2e-28
3DCNL2_MOUSE (Q8BZJ7) DCN1-like protein 2 (Defective in cullin ne... 122 5e-28
4DCNL1_CHICK (Q5ZKU1) DCN1-like protein 1 (Defective in cullin ne... 122 7e-28
5DCNL2_HUMAN (Q6PH85) DCN1-like protein 2 (Defective in cullin ne... 120 3e-27
6DCN1L_DROME (Q9VUQ8) DCN1-like protein (Defective in cullin nedd... 87 4e-17
7DCN1_CAEBR (Q60YT5) Defective in cullin neddylation protein 1 72 8e-13
8DCN1_YARLI (Q6C0B6) Defective in cullin neddylation protein 1 71 2e-12
9DCN1_USTMA (Q4PF67) Defective in cullin neddylation protein 1 62 1e-09
10DCN1_CAEEL (Q9U3C8) Defective in cullin neddylation protein 1 62 1e-09
11DCNL4_BRARE (Q5RHX6) DCN1-like protein 4 (Defective in cullin ne... 58 2e-08
12DCNL4_HUMAN (Q92564) DCN1-like protein 4 (Defective in cullin ne... 58 2e-08
13DCNL4_MOUSE (Q8CCA0) DCN1-like protein 4 (Defective in cullin ne... 56 6e-08
14DCN1_CRYNE (Q5KHV1) Defective in cullin neddylation protein 1 55 1e-07
15DCN1_MAGGR (Q52DM9) Defective in cullin neddylation protein 1 49 7e-06
16DCN1_CANAL (Q5ADL9) Defective in cullin neddylation protein 1 47 3e-05
17DCN1_EMENI (Q5AWS1) Defective in cullin neddylation protein 1 45 1e-04
18DCN1_ASHGO (Q750Y3) Defective in cullin neddylation protein 1 40 0.004
19MURE_XYLFA (Q9PF85) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-... 32 1.6
20MURE_XYLFT (Q87AF5) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-... 31 2.1
21GCH1_NEUCR (P51599) GTP cyclohydrolase I (EC 3.5.4.16) (GTP-CH-I) 30 3.6
22ISPH_LEIXX (Q6ADV0) 4-hydroxy-3-methylbut-2-enyl diphosphate red... 30 4.6
23GMDS_DROME (Q9VMW9) Probable GDP-mannose 4,6 dehydratase (EC 4.2... 30 4.6
24UBX5_YEAST (Q06682) UBX domain-containing protein 5 30 6.1
25UBXD7_MOUSE (Q6P5G6) UBX domain-containing protein 7 29 7.9
26RIB7_ASHGO (Q757H6) 5-amino-6-(5-phosphoribosylamino)uracil redu... 29 7.9
27UBXD7_PONPY (Q5REY7) UBX domain-containing protein 7 29 7.9
28UBXD7_HUMAN (O94888) UBX domain-containing protein 7 29 7.9

>DCNL1_MOUSE (Q9QZ73) DCN1-like protein 1 (Defective in cullin neddylation|
           protein 1-like protein 1) (DCUN1 domain-containing
           protein 1) (Testis-specific protein 3)
          Length = 259

 Score =  124 bits (311), Expect = 2e-28
 Identities = 60/136 (44%), Positives = 90/136 (66%), Gaps = 8/136 (5%)
 Frame = +2

Query: 179 MHKLGRGSRDKVQQFMSITGASEKVALQALKASDWHLEGSFDYFYSQPQVSVTNS----- 343
           M+KL    +DKV+QFM  T +SEK A+  L  +DW L+ + D F+  P++ +  S     
Sbjct: 1   MNKLKSSQKDKVRQFMIFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSL 60

Query: 344 --RHLEDLYSRYKE-RDADMIMVEGTSQFCNDLLVDPQDIVMLVISWHMKAATMCEFTRQ 514
             + LE LY+RYK+ +D + I ++G  QFC+DL +DP  I +L+I+W  +AAT CEF++Q
Sbjct: 61  DRKKLEQLYTRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQ 120

Query: 515 EFIDGLQSIGVDSIEK 562
           EF+DG+  +G DSIEK
Sbjct: 121 EFMDGMTELGCDSIEK 136



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>DCNL1_HUMAN (Q96GG9) DCN1-like protein 1 (Defective in cullin neddylation|
           protein 1-like protein 1) (DCUN1 domain-containing
           protein 1) (Squamous cell carcinoma-related oncogene)
          Length = 259

 Score =  124 bits (311), Expect = 2e-28
 Identities = 60/136 (44%), Positives = 90/136 (66%), Gaps = 8/136 (5%)
 Frame = +2

Query: 179 MHKLGRGSRDKVQQFMSITGASEKVALQALKASDWHLEGSFDYFYSQPQVSVTNS----- 343
           M+KL    +DKV+QFM  T +SEK A+  L  +DW L+ + D F+  P++ +  S     
Sbjct: 1   MNKLKSSQKDKVRQFMIFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSL 60

Query: 344 --RHLEDLYSRYKE-RDADMIMVEGTSQFCNDLLVDPQDIVMLVISWHMKAATMCEFTRQ 514
             + LE LY+RYK+ +D + I ++G  QFC+DL +DP  I +L+I+W  +AAT CEF++Q
Sbjct: 61  DRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQ 120

Query: 515 EFIDGLQSIGVDSIEK 562
           EF+DG+  +G DSIEK
Sbjct: 121 EFMDGMTELGCDSIEK 136



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>DCNL2_MOUSE (Q8BZJ7) DCN1-like protein 2 (Defective in cullin neddylation|
           protein 2-like protein 2) (DCUN1 domain-containing
           protein 2)
          Length = 258

 Score =  122 bits (307), Expect = 5e-28
 Identities = 59/136 (43%), Positives = 89/136 (65%), Gaps = 8/136 (5%)
 Frame = +2

Query: 179 MHKLGRGSRDKVQQFMSITGASEKVALQALKASDWHLEGSFDYFYSQPQV-------SVT 337
           MHKL    +DKV+QFM+ T ASE+ A+  L  ++W L+ + D F+  P+        S  
Sbjct: 1   MHKLKSAQKDKVRQFMACTQASERTAIYCLTQNEWKLDEATDSFFQNPEAFHRESMKSSV 60

Query: 338 NSRHLEDLYSRYKE-RDADMIMVEGTSQFCNDLLVDPQDIVMLVISWHMKAATMCEFTRQ 514
           + + LE LYSRYK+ +D + I ++G  QFC+DL +DP  I +LVI+W  +AAT CEF+++
Sbjct: 61  DQKKLEQLYSRYKDPQDENKIGIDGIQQFCDDLSLDPASISVLVIAWKFRAATQCEFSKK 120

Query: 515 EFIDGLQSIGVDSIEK 562
           EF+DG+  +G DS E+
Sbjct: 121 EFVDGMTELGCDSTER 136



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>DCNL1_CHICK (Q5ZKU1) DCN1-like protein 1 (Defective in cullin neddylation|
           protein 1-like protein 1) (DCUN1 domain-containing
           protein 1)
          Length = 259

 Score =  122 bits (306), Expect = 7e-28
 Identities = 59/136 (43%), Positives = 89/136 (65%), Gaps = 8/136 (5%)
 Frame = +2

Query: 179 MHKLGRGSRDKVQQFMSITGASEKVALQALKASDWHLEGSFDYFYSQPQVSVTNS----- 343
           M+KL    +DKV+QFM  T +SEK A+  L  +DW L+ + D F+  P++ +  S     
Sbjct: 1   MNKLKSSQKDKVRQFMVFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSL 60

Query: 344 --RHLEDLYSRYKE-RDADMIMVEGTSQFCNDLLVDPQDIVMLVISWHMKAATMCEFTRQ 514
             + LE LY+RYK+ +D + I ++G  QFC+DL +DP  I +L+I+W  +AAT CEF++ 
Sbjct: 61  DRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASITVLIIAWKFRAATQCEFSKL 120

Query: 515 EFIDGLQSIGVDSIEK 562
           EF+DG+  +G DSIEK
Sbjct: 121 EFMDGMTELGCDSIEK 136



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>DCNL2_HUMAN (Q6PH85) DCN1-like protein 2 (Defective in cullin neddylation|
           protein 2-like protein 2) (DCUN1 domain-containing
           protein 2)
          Length = 259

 Score =  120 bits (301), Expect = 3e-27
 Identities = 59/136 (43%), Positives = 87/136 (63%), Gaps = 8/136 (5%)
 Frame = +2

Query: 179 MHKLGRGSRDKVQQFMSITGASEKVALQALKASDWHLEGSFDYFYSQPQV-------SVT 337
           MHKL    +DKV+QFM+ T A E+ A+  L  ++W L+ + D F+  P         +  
Sbjct: 1   MHKLKSSQKDKVRQFMACTQAGERTAIYCLTQNEWRLDEATDSFFQNPDSLHRESMRNAV 60

Query: 338 NSRHLEDLYSRYKE-RDADMIMVEGTSQFCNDLLVDPQDIVMLVISWHMKAATMCEFTRQ 514
           + + LE LY RYK+ +D + I V+G  QFC+DL +DP  I +LVI+W  +AAT CEF+R+
Sbjct: 61  DKKKLERLYGRYKDPQDENKIGVDGIQQFCDDLSLDPASISVLVIAWKFRAATQCEFSRK 120

Query: 515 EFIDGLQSIGVDSIEK 562
           EF+DG+  +G DS+EK
Sbjct: 121 EFLDGMTELGCDSMEK 136



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>DCN1L_DROME (Q9VUQ8) DCN1-like protein (Defective in cullin neddylation protein|
           1-like protein)
          Length = 288

 Score = 86.7 bits (213), Expect = 4e-17
 Identities = 46/132 (34%), Positives = 78/132 (59%), Gaps = 4/132 (3%)
 Frame = +2

Query: 179 MHKLGRGS-RDKVQQFMSITGASEKVALQALKASDWHLEGSFDYFYSQPQVSVT--NSRH 349
           M+KL   + RDKV++F+S+T   E+ A+  L+ +DW  E + D ++  P+      + + 
Sbjct: 1   MNKLKSSTHRDKVKKFISLTHTGEQTAIFCLQQNDWKFELASDNYFQNPEYYYRELDRKR 60

Query: 350 LEDLYSRYKE-RDADMIMVEGTSQFCNDLLVDPQDIVMLVISWHMKAATMCEFTRQEFID 526
           +E L+ RY++  D   I  +G   F  DL + P   ++L+I+W   A   CEF+R EFI+
Sbjct: 61  IEQLFMRYRDPSDPLKIGSQGVIHFLEDLDLKPDSKLVLIIAWKFHAEVQCEFSRDEFIN 120

Query: 527 GLQSIGVDSIEK 562
           G+  +G+DSI+K
Sbjct: 121 GMCDLGIDSIDK 132



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>DCN1_CAEBR (Q60YT5) Defective in cullin neddylation protein 1|
          Length = 292

 Score = 72.4 bits (176), Expect = 8e-13
 Identities = 42/137 (30%), Positives = 78/137 (56%), Gaps = 10/137 (7%)
 Frame = +2

Query: 179 MHKLGRGSRDKVQQFMSITGASEKVALQALKASDWHLEGSFDYFYSQPQV-------SVT 337
           M++L    + K++QF+  T A+E V+L  L  ++W++E +   +Y  P +       +V 
Sbjct: 1   MNRLKADQKTKLRQFVQWTQATEPVSLNFLAKANWNIEYAMTLYYDNPNLFSSSAPATVD 60

Query: 338 NSRHLEDLYSRYKERD---ADMIMVEGTSQFCNDLLVDPQDIVMLVISWHMKAATMCEFT 508
            S+ ++ L+++Y ++     + I   G  +   DL  +P D  +L+++W  KA T CEF+
Sbjct: 61  QSKTIQ-LFTQYVDKRDGLGERIGPHGMQRLLIDLGYEPIDRRVLILAWVFKAETQCEFS 119

Query: 509 RQEFIDGLQSIGVDSIE 559
            QEF +G+ S+ VDSI+
Sbjct: 120 LQEFTNGMASLQVDSIQ 136



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>DCN1_YARLI (Q6C0B6) Defective in cullin neddylation protein 1|
          Length = 240

 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 33/116 (28%), Positives = 71/116 (61%)
 Frame = +2

Query: 209 KVQQFMSITGASEKVALQALKASDWHLEGSFDYFYSQPQVSVTNSRHLEDLYSRYKERDA 388
           ++++ M+ TG+ EK A  AL+  DW++E + D+  + PQV ++ +     ++ +Y+  D+
Sbjct: 10  EIRRVMTFTGSKEKTARDALEKFDWNVEVAIDHILNTPQVDLSGA---SKVFDKYRNADS 66

Query: 389 DMIMVEGTSQFCNDLLVDPQDIVMLVISWHMKAATMCEFTRQEFIDGLQSIGVDSI 556
           D I ++GT Q+  DL +  ++  +L ++    + ++  FTR+ F++G  +IG D++
Sbjct: 67  DEIDLDGTIQYITDLGLSLEEPTVLAVAMTAGSPSVGTFTRKPFVEGWAAIGGDTL 122



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>DCN1_USTMA (Q4PF67) Defective in cullin neddylation protein 1|
          Length = 319

 Score = 62.0 bits (149), Expect = 1e-09
 Identities = 39/148 (26%), Positives = 74/148 (50%), Gaps = 31/148 (20%)
 Frame = +2

Query: 212 VQQFMSITGASEKVALQALKASDWHLEGSFDYFYSQPQVSVTNS---------------R 346
           ++QF  +T A+ + A + LKA  + +E + D F++  Q  +  S                
Sbjct: 11  LRQFRQLTNATPQDANRILKAHGYRIEPATDAFFNNEQAQINASISSSTLDRKSEREVKE 70

Query: 347 HLEDLYSRYKE---------------RDADMIMVEGTSQFCNDLLVDPQDIVMLVISWHM 481
            L  L+ R+++                D D+I + G  + C  L V P+D+V L +S+++
Sbjct: 71  RLNALFDRFRDAGADSDEEDDEASQPEDRDLISIGGALKMCEALEVSPEDVVFLPLSYYL 130

Query: 482 KAATMCEFTRQEFIDGLQSIGV-DSIEK 562
           K+A+M  FTR+ +I+G + + + D+I+K
Sbjct: 131 KSASMGTFTREGYINGWKMLDLSDTIDK 158



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>DCN1_CAEEL (Q9U3C8) Defective in cullin neddylation protein 1|
          Length = 295

 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 38/139 (27%), Positives = 76/139 (54%), Gaps = 12/139 (8%)
 Frame = +2

Query: 179 MHKLGRGSRDKVQQFMSITGASEKVALQALKASDWHLEGSFDYFY--------SQPQVSV 334
           M++L    + K++QF+  T  +E V+L  L  ++W++E +   ++        S PQ SV
Sbjct: 1   MNRLKSDQKTKLRQFVQWTQVTEAVSLNFLAKANWNIEYAMTLYFDNPNLFAGSTPQPSV 60

Query: 335 TNSRHLEDLYSRY---KERDADMIM-VEGTSQFCNDLLVDPQDIVMLVISWHMKAATMCE 502
             S ++E L+++Y   K++  +  M   G ++   DL  +  D  +LV++W   A T CE
Sbjct: 61  DRS-NIERLFNQYVDPKDKVGEKRMGPHGINRLLTDLGYEATDRRVLVLAWKFTAQTQCE 119

Query: 503 FTRQEFIDGLQSIGVDSIE 559
           F+  E++ G+ ++  D+++
Sbjct: 120 FSLDEWVKGMTALQADTVQ 138



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>DCNL4_BRARE (Q5RHX6) DCN1-like protein 4 (Defective in cullin neddylation|
           protein 1-like protein 4) (DCUN1 domain-containing
           protein 4)
          Length = 280

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 25/58 (43%), Positives = 41/58 (70%)
 Frame = +2

Query: 389 DMIMVEGTSQFCNDLLVDPQDIVMLVISWHMKAATMCEFTRQEFIDGLQSIGVDSIEK 562
           D++  EG  +FC D+ V+P+++VMLV++W + A +M  FT QE++ G+ S+  DS EK
Sbjct: 106 DVVGPEGMEKFCEDIGVEPENVVMLVLAWKLDAQSMGYFTLQEWLKGMGSLQCDSTEK 163



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>DCNL4_HUMAN (Q92564) DCN1-like protein 4 (Defective in cullin neddylation|
           protein 1-like protein 4) (DCUN1 domain-containing
           protein 4)
          Length = 292

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 31/102 (30%), Positives = 56/102 (54%)
 Frame = +2

Query: 257 LQALKASDWHLEGSFDYFYSQPQVSVTNSRHLEDLYSRYKERDADMIMVEGTSQFCNDLL 436
           L A K+    +   +D    + +    +S+   + +  Y   D D++  EG  +FC D+ 
Sbjct: 75  LSAKKSRHDSMYRKYDSTRIKTEEEAFSSKRCLEWFYEYAGTD-DVVGPEGMEKFCEDIG 133

Query: 437 VDPQDIVMLVISWHMKAATMCEFTRQEFIDGLQSIGVDSIEK 562
           V+P+++VMLV++W + A  M  FT QE++ G+ S+  D+ EK
Sbjct: 134 VEPENVVMLVLAWKLDAQNMGYFTLQEWLKGMTSLQCDTTEK 175



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>DCNL4_MOUSE (Q8CCA0) DCN1-like protein 4 (Defective in cullin neddylation|
           protein 1-like protein 4) (DCUN1 domain-containing
           protein 4)
          Length = 292

 Score = 56.2 bits (134), Expect = 6e-08
 Identities = 29/76 (38%), Positives = 46/76 (60%)
 Frame = +2

Query: 335 TNSRHLEDLYSRYKERDADMIMVEGTSQFCNDLLVDPQDIVMLVISWHMKAATMCEFTRQ 514
           ++ R LE  Y      DA  +  EG  +FC D+ V+P+++VMLV++W + A  M  FT Q
Sbjct: 102 SSKRCLEWFYEYAGTEDA--VGPEGMEKFCEDIGVEPENVVMLVLAWKLDAQNMGYFTLQ 159

Query: 515 EFIDGLQSIGVDSIEK 562
           E++ G+ S+  D+ EK
Sbjct: 160 EWLKGMTSLQCDTTEK 175



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>DCN1_CRYNE (Q5KHV1) Defective in cullin neddylation protein 1|
          Length = 279

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 35/124 (28%), Positives = 65/124 (52%), Gaps = 7/124 (5%)
 Frame = +2

Query: 212 VQQFMSITGASEKVALQALKASDWHLEGSFDYFYSQ---PQVSVTNSRHLEDLYSRYKE- 379
           V QF +ITG S   A + +K    H+E + D FY+    P+      R L +++ ++K+ 
Sbjct: 16  VTQFRAITGTSSAEAAKYIKRYK-HIEAAVDAFYNNEPAPRADPAQERKLGEIWEKFKDP 74

Query: 380 RDADMIMVEGTSQFCNDLLVDP-QDIVMLVISWHMKAATMCEFTRQEFIDGLQSI--GVD 550
            D  +I ++GT + C +L +DP  D V+  ++  + +    E+ +  F+ G+ S    +D
Sbjct: 75  SDPKLIKIDGTMELCEELDIDPGTDAVLFCLAADLGSKATGEWEKAPFVAGIASYPGNID 134

Query: 551 SIEK 562
           S+ K
Sbjct: 135 SLPK 138



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>DCN1_MAGGR (Q52DM9) Defective in cullin neddylation protein 1|
          Length = 281

 Score = 49.3 bits (116), Expect = 7e-06
 Identities = 32/113 (28%), Positives = 61/113 (53%), Gaps = 6/113 (5%)
 Frame = +2

Query: 218 QFMSITGASEKVALQALKASDWHLEGSFD-YFYSQPQVSVTNSR--HLEDLYSRY---KE 379
           QF+ +T  ++KVA + LK ++W L+ + D YF S P ++ ++S    L+ ++S     +E
Sbjct: 13  QFVHMTATNDKVAQKFLKNANWKLDIAADAYFNSNPNMATSSSSKPKLDKMFSDLQDTQE 72

Query: 380 RDADMIMVEGTSQFCNDLLVDPQDIVMLVISWHMKAATMCEFTRQEFIDGLQS 538
              D +      ++ + L VDP+ + + V+   +KA      TR  F++G Q+
Sbjct: 73  DSPDELGAGSAIEYASSLGVDPESVGIFVLMELVKAPAFGVITRSGFVEGWQA 125



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>DCN1_CANAL (Q5ADL9) Defective in cullin neddylation protein 1|
          Length = 304

 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 10/113 (8%)
 Frame = +2

Query: 215 QQFMSITGASEKVALQALKASDWHLEGSFDYFYSQ---------PQVSVTNSRHLEDLYS 367
           QQF  +TG S   A + L++  + L  + D +Y++           V V     L  ++ 
Sbjct: 17  QQFCELTGTSNTTATKYLESVRYDLARAIDNYYNKHPNKAQVTKKPVKVKIDDRLIQIFD 76

Query: 368 RYKE-RDADMIMVEGTSQFCNDLLVDPQDIVMLVISWHMKAATMCEFTRQEFI 523
           +YK+  D + I +EGT  +  DL + P  I  L ++  +K+     FTR+ F+
Sbjct: 77  KYKDSEDPNKIDIEGTLTYLGDLGISPDQIESLSLALLLKSPKTGVFTRENFL 129



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>DCN1_EMENI (Q5AWS1) Defective in cullin neddylation protein 1|
          Length = 308

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 21/62 (33%), Positives = 39/62 (62%)
 Frame = +2

Query: 377 ERDADMIMVEGTSQFCNDLLVDPQDIVMLVISWHMKAATMCEFTRQEFIDGLQSIGVDSI 556
           E + D I +EG  ++  D+ V+  ++  L I+  +++ +M EFTR+ F++G +S+  DSI
Sbjct: 111 EENPDTIGIEGAMRYLGDIEVELDEVTCLAIAELLQSPSMGEFTREGFLNGWRSVQCDSI 170

Query: 557 EK 562
            K
Sbjct: 171 AK 172



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>DCN1_ASHGO (Q750Y3) Defective in cullin neddylation protein 1|
          Length = 256

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 25/120 (20%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
 Frame = +2

Query: 203 RDKVQQFMSITGASEKVALQALKASDWHLEGSFDYFYSQPQVSVTNSRHLEDLYSRYKER 382
           R+ +++F+++T A+   A   L+ + W L+ + D FY+Q        ++  +L + ++  
Sbjct: 8   RELIREFLAVTSATSAAAETYLERNHWSLDHALDDFYTQSGGGGRAEQYSAELVATFERY 67

Query: 383 DADMIM-VEGTSQFCNDLLVDPQDIVMLVISWHMKAATM-CEFTRQEFIDGLQSIGVDSI 556
            A   M  E   ++  DL    +D+  L ++  +K   +  + +R +F+     +G  S+
Sbjct: 68  AAGGAMDTEALVRYVGDLGFQLEDVATLCLARLLKVEELTADISRFQFLSTWHGLGCSSL 127



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>MURE_XYLFA (Q9PF85) UDP-N-acetylmuramoylalanyl-D-glutamate--2,|
           6-diaminopimelate ligase (EC 6.3.2.13)
           (UDP-N-acetylmuramyl-tripeptide synthetase)
           (Meso-diaminopimelate-adding enzyme)
           (UDP-MurNAc-tripeptide synthetase)
          Length = 495

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 17/64 (26%), Positives = 28/64 (43%)
 Frame = +2

Query: 104 PATRSTGIPSSLISLSGVGRSTRGTMHKLGRGSRDKVQQFMSITGASEKVALQALKASDW 283
           PA +   +P   I++ G+ R+  G M     G   +    + +TG + K +   L A  W
Sbjct: 68  PAPQGVSVPDGAIAVHGL-RARLGAMADRFHGHPSQAMTMVGVTGTNGKTSTVQLLAQAW 126

Query: 284 HLEG 295
           H  G
Sbjct: 127 HCLG 130



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>MURE_XYLFT (Q87AF5) UDP-N-acetylmuramoylalanyl-D-glutamate--2,|
           6-diaminopimelate ligase (EC 6.3.2.13)
           (UDP-N-acetylmuramyl-tripeptide synthetase)
           (Meso-diaminopimelate-adding enzyme)
           (UDP-MurNAc-tripeptide synthetase)
          Length = 495

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 17/64 (26%), Positives = 28/64 (43%)
 Frame = +2

Query: 104 PATRSTGIPSSLISLSGVGRSTRGTMHKLGRGSRDKVQQFMSITGASEKVALQALKASDW 283
           PA +   +P   I++ G+ R+  G M     G   +    + +TG + K +   L A  W
Sbjct: 68  PAPQGVSVPDGAIAVHGL-RARLGAMADRFHGHPSQAMTMVGVTGTNGKTSTVQLLAQAW 126

Query: 284 HLEG 295
           H  G
Sbjct: 127 HRLG 130



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>GCH1_NEUCR (P51599) GTP cyclohydrolase I (EC 3.5.4.16) (GTP-CH-I)|
          Length = 313

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +2

Query: 104 PATRSTGIPSSLISLSGVGRSTRGTMHKLGRGSRDKVQQFMSITGA 241
           P+T  T  PS +I   G+ R +RGT  +L      K ++   + GA
Sbjct: 90  PSTSVTRSPSPVIDFDGLSRPSRGTRERLEETEAQKQERLDKMKGA 135



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>ISPH_LEIXX (Q6ADV0) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC|
           1.17.1.2)
          Length = 337

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
 Frame = +2

Query: 380 RDADMIMVEGTSQFCNDLLVDPQDIVMLVISWHMKAATMCEFT---RQEFIDGLQSIGVD 550
           + AD+++V G++   N +      +V + + +  KAA   ++    RQE++DG+ ++GV 
Sbjct: 222 QSADLVIVVGSANSSNSVR-----LVEVALEYGAKAAYRVDYASEIRQEWLDGVATVGVT 276

Query: 551 S 553
           S
Sbjct: 277 S 277



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>GMDS_DROME (Q9VMW9) Probable GDP-mannose 4,6 dehydratase (EC 4.2.1.47)|
           (GDP-D-mannose dehydratase) (Dm-gmd)
          Length = 395

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 35/152 (23%), Positives = 57/152 (37%), Gaps = 16/152 (10%)
 Frame = +2

Query: 143 SLSGVGRSTRGTMHKLGRGSRDKVQQFMSITGASEKVALQALKASDWHLEGSFDYFYSQP 322
           S S   +   GT       SRDKV     ITG       + L   D+ + G         
Sbjct: 25  SSSNGSKDQNGTEAGAEGDSRDKVALITGITGQDGSYLAEFLLKKDYEVHGII------R 78

Query: 323 QVSVTNSRHLEDLYS--------RYKERDADMIMVEGTSQFCNDLLVDPQDIVMLVISWH 478
           + S  N+  +E LY+        R K    DM       +  N  +V P +I  L    H
Sbjct: 79  RASTFNTTRIEHLYADPKAHKGGRMKLHYGDMTDSSSLVKIIN--MVKPTEIYNLAAQSH 136

Query: 479 MKAA-TMCEFTRQ-------EFIDGLQSIGVD 550
           +K +  + E+T +         +D +++ G++
Sbjct: 137 VKVSFDLSEYTAEVDAVGTLRILDAIRTCGME 168



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>UBX5_YEAST (Q06682) UBX domain-containing protein 5|
          Length = 500

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = +2

Query: 200 SRDKVQQFMSITGASE-KVALQALKASDWHLEGSFDYFYSQPQVSVTNSRH 349
           S  KV +FM+ITGA +  +A Q ++ +D +L  +   F+     ++ +S +
Sbjct: 2   SEGKVDEFMAITGADDAAIATQFIEMADGNLNTAISLFFENGGAALLSSNN 52



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>UBXD7_MOUSE (Q6P5G6) UBX domain-containing protein 7|
          Length = 467

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +2

Query: 212 VQQFMSITGASEKVALQALKASDWHLEGSFDYF 310
           +QQF +ITGASE V    L+A + +LE +   F
Sbjct: 17  IQQFTAITGASESVGKHMLEACNNNLEMAVTMF 49



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>RIB7_ASHGO (Q757H6) 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC|
           1.1.1.193) (HTP reductase)
          Length = 246

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = +2

Query: 356 DLYSR-YKERDADMIMVEGTSQFCNDLLVDPQDIVMLVIS 472
           +L+ R Y E   + +MVEG ++  N LL+ P  +  LVI+
Sbjct: 167 ELFERLYSEHHLESVMVEGGAEVLNQLLLRPDIVDSLVIT 206



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>UBXD7_PONPY (Q5REY7) UBX domain-containing protein 7|
          Length = 489

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +2

Query: 212 VQQFMSITGASEKVALQALKASDWHLEGSFDYF 310
           +QQF +ITGASE V    L+A + +LE +   F
Sbjct: 17  IQQFTTITGASESVGKHMLEACNNNLEMAVTMF 49



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>UBXD7_HUMAN (O94888) UBX domain-containing protein 7|
          Length = 489

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +2

Query: 212 VQQFMSITGASEKVALQALKASDWHLEGSFDYF 310
           +QQF +ITGASE V    L+A + +LE +   F
Sbjct: 17  IQQFTTITGASESVGKHMLEACNNNLEMAVTMF 49


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,232,279
Number of Sequences: 219361
Number of extensions: 1851218
Number of successful extensions: 5121
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 4964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5105
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4585734400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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