| Clone Name | basd26l06 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_185573.2| Oryza sativa (japonica cultivar-group), mRNA Length = 2968 Score = 595 bits (300), Expect = e-167 Identities = 444/491 (90%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 1 gagatattgatn-tctcgctgcagcatttctcacttctcacaatattgctcacggggtga 59 ||||||||||| ||| |||||||||||||| |||||||| ||||||||||||||||| | Sbjct: 1998 gagatattgatcatcttgctgcagcatttcttacttctcataatattgctcacggggtta 2057 Query: 60 acttaaagaagtcccctgtcctccagtacttgtattatcttgctcagattggtcttgcaa 119 | |||||||||||||||||||||||||| ||||||| || ||||||||||||||||| | Sbjct: 2058 atttaaagaagtcccctgtcctccagtatctgtattacctagctcagattggtcttgcca 2117 Query: 120 tgtctcctttgagcaacaactcattgtttattgactaccaccggaaccctttcccaacat 179 |||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||| Sbjct: 2118 tgtctcctttgagcaacaactcattgtttattgattatcaccgaaaccctttcccaacat 2177 Query: 180 ttttcctaagaggcctgaatgtttctctctcaaccgacgaccctttgcaaattcacctaa 239 |||||||||||||||| || |||||||| |||||||| |||||||||||||||||||| | Sbjct: 2178 ttttcctaagaggccttaacgtttctctatcaaccgatgaccctttgcaaattcacctga 2237 Query: 240 caaaagaacctttggttgaagaatacagtgtcgctgcttcgctgtggaagcttagctctt 299 ||||||||||||||||||||||||| || |||||||||||||||||||||| || || | Sbjct: 2238 caaaagaacctttggttgaagaatatagcatcgctgcttcgctgtggaagctaagttcat 2297 Query: 300 gtgacttgtgtgagatagccaggaattctgtgtaccagtccggtttctctcataggctaa 359 | ||| | ||||| || || |||||||||||||||||||| ||||||||||||||||| | Sbjct: 2298 gcgacctatgtgaaattgctaggaattctgtgtaccagtctggtttctctcataggctca 2357 Query: 360 agtcacactggattggtagaaactactacaaaagaggtcccgacggcaatgacatccacc 419 |||||||||||||||| |||||||||||||||||||||| || ||||||||||| |||| Sbjct: 2358 agtcacactggattgggagaaactactacaaaagaggtcatgatggcaatgacattcacc 2417 Query: 420 agacaaatgttccccacattaggatcgaattccgacacaacatttggaaagaggagatgg 479 ||||||||||||| ||||| ||||| ||||||||||||| ||||||||||| || |||| Sbjct: 2418 agacaaatgttcctcacatcaggattgaattccgacacactatttggaaagaagaaatgg 2477 Query: 480 agctgatacat 490 |||| |||||| Sbjct: 2478 agctaatacat 2488
>ref|XM_506591.1| PREDICTED Oryza sativa (japonica cultivar-group), P0034A04.129 mRNA Length = 2984 Score = 595 bits (300), Expect = e-167 Identities = 444/491 (90%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 1 gagatattgatn-tctcgctgcagcatttctcacttctcacaatattgctcacggggtga 59 ||||||||||| ||| |||||||||||||| |||||||| ||||||||||||||||| | Sbjct: 2017 gagatattgatcatcttgctgcagcatttcttacttctcataatattgctcacggggtta 2076 Query: 60 acttaaagaagtcccctgtcctccagtacttgtattatcttgctcagattggtcttgcaa 119 | |||||||||||||||||||||||||| ||||||| || ||||||||||||||||| | Sbjct: 2077 atttaaagaagtcccctgtcctccagtatctgtattacctagctcagattggtcttgcca 2136 Query: 120 tgtctcctttgagcaacaactcattgtttattgactaccaccggaaccctttcccaacat 179 |||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||| Sbjct: 2137 tgtctcctttgagcaacaactcattgtttattgattatcaccgaaaccctttcccaacat 2196 Query: 180 ttttcctaagaggcctgaatgtttctctctcaaccgacgaccctttgcaaattcacctaa 239 |||||||||||||||| || |||||||| |||||||| |||||||||||||||||||| | Sbjct: 2197 ttttcctaagaggccttaacgtttctctatcaaccgatgaccctttgcaaattcacctga 2256 Query: 240 caaaagaacctttggttgaagaatacagtgtcgctgcttcgctgtggaagcttagctctt 299 ||||||||||||||||||||||||| || |||||||||||||||||||||| || || | Sbjct: 2257 caaaagaacctttggttgaagaatatagcatcgctgcttcgctgtggaagctaagttcat 2316 Query: 300 gtgacttgtgtgagatagccaggaattctgtgtaccagtccggtttctctcataggctaa 359 | ||| | ||||| || || |||||||||||||||||||| ||||||||||||||||| | Sbjct: 2317 gcgacctatgtgaaattgctaggaattctgtgtaccagtctggtttctctcataggctca 2376 Query: 360 agtcacactggattggtagaaactactacaaaagaggtcccgacggcaatgacatccacc 419 |||||||||||||||| |||||||||||||||||||||| || ||||||||||| |||| Sbjct: 2377 agtcacactggattgggagaaactactacaaaagaggtcatgatggcaatgacattcacc 2436 Query: 420 agacaaatgttccccacattaggatcgaattccgacacaacatttggaaagaggagatgg 479 ||||||||||||| ||||| ||||| ||||||||||||| ||||||||||| || |||| Sbjct: 2437 agacaaatgttcctcacatcaggattgaattccgacacactatttggaaagaagaaatgg 2496 Query: 480 agctgatacat 490 |||| |||||| Sbjct: 2497 agctaatacat 2507
>dbj|AK102007.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033079N23, full insert sequence Length = 2983 Score = 595 bits (300), Expect = e-167 Identities = 444/491 (90%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 1 gagatattgatn-tctcgctgcagcatttctcacttctcacaatattgctcacggggtga 59 ||||||||||| ||| |||||||||||||| |||||||| ||||||||||||||||| | Sbjct: 2016 gagatattgatcatcttgctgcagcatttcttacttctcataatattgctcacggggtta 2075 Query: 60 acttaaagaagtcccctgtcctccagtacttgtattatcttgctcagattggtcttgcaa 119 | |||||||||||||||||||||||||| ||||||| || ||||||||||||||||| | Sbjct: 2076 atttaaagaagtcccctgtcctccagtatctgtattacctagctcagattggtcttgcca 2135 Query: 120 tgtctcctttgagcaacaactcattgtttattgactaccaccggaaccctttcccaacat 179 |||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||| Sbjct: 2136 tgtctcctttgagcaacaactcattgtttattgattatcaccgaaaccctttcccaacat 2195 Query: 180 ttttcctaagaggcctgaatgtttctctctcaaccgacgaccctttgcaaattcacctaa 239 |||||||||||||||| || |||||||| |||||||| |||||||||||||||||||| | Sbjct: 2196 ttttcctaagaggccttaacgtttctctatcaaccgatgaccctttgcaaattcacctga 2255 Query: 240 caaaagaacctttggttgaagaatacagtgtcgctgcttcgctgtggaagcttagctctt 299 ||||||||||||||||||||||||| || |||||||||||||||||||||| || || | Sbjct: 2256 caaaagaacctttggttgaagaatatagcatcgctgcttcgctgtggaagctaagttcat 2315 Query: 300 gtgacttgtgtgagatagccaggaattctgtgtaccagtccggtttctctcataggctaa 359 | ||| | ||||| || || |||||||||||||||||||| ||||||||||||||||| | Sbjct: 2316 gcgacctatgtgaaattgctaggaattctgtgtaccagtctggtttctctcataggctca 2375 Query: 360 agtcacactggattggtagaaactactacaaaagaggtcccgacggcaatgacatccacc 419 |||||||||||||||| |||||||||||||||||||||| || ||||||||||| |||| Sbjct: 2376 agtcacactggattgggagaaactactacaaaagaggtcatgatggcaatgacattcacc 2435 Query: 420 agacaaatgttccccacattaggatcgaattccgacacaacatttggaaagaggagatgg 479 ||||||||||||| ||||| ||||| ||||||||||||| ||||||||||| || |||| Sbjct: 2436 agacaaatgttcctcacatcaggattgaattccgacacactatttggaaagaagaaatgg 2495 Query: 480 agctgatacat 490 |||| |||||| Sbjct: 2496 agctaatacat 2506
>dbj|AK064333.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-G05, full insert sequence Length = 2968 Score = 595 bits (300), Expect = e-167 Identities = 444/491 (90%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 1 gagatattgatn-tctcgctgcagcatttctcacttctcacaatattgctcacggggtga 59 ||||||||||| ||| |||||||||||||| |||||||| ||||||||||||||||| | Sbjct: 1998 gagatattgatcatcttgctgcagcatttcttacttctcataatattgctcacggggtta 2057 Query: 60 acttaaagaagtcccctgtcctccagtacttgtattatcttgctcagattggtcttgcaa 119 | |||||||||||||||||||||||||| ||||||| || ||||||||||||||||| | Sbjct: 2058 atttaaagaagtcccctgtcctccagtatctgtattacctagctcagattggtcttgcca 2117 Query: 120 tgtctcctttgagcaacaactcattgtttattgactaccaccggaaccctttcccaacat 179 |||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||| Sbjct: 2118 tgtctcctttgagcaacaactcattgtttattgattatcaccgaaaccctttcccaacat 2177 Query: 180 ttttcctaagaggcctgaatgtttctctctcaaccgacgaccctttgcaaattcacctaa 239 |||||||||||||||| || |||||||| |||||||| |||||||||||||||||||| | Sbjct: 2178 ttttcctaagaggccttaacgtttctctatcaaccgatgaccctttgcaaattcacctga 2237 Query: 240 caaaagaacctttggttgaagaatacagtgtcgctgcttcgctgtggaagcttagctctt 299 ||||||||||||||||||||||||| || |||||||||||||||||||||| || || | Sbjct: 2238 caaaagaacctttggttgaagaatatagcatcgctgcttcgctgtggaagctaagttcat 2297 Query: 300 gtgacttgtgtgagatagccaggaattctgtgtaccagtccggtttctctcataggctaa 359 | ||| | ||||| || || |||||||||||||||||||| ||||||||||||||||| | Sbjct: 2298 gcgacctatgtgaaattgctaggaattctgtgtaccagtctggtttctctcataggctca 2357 Query: 360 agtcacactggattggtagaaactactacaaaagaggtcccgacggcaatgacatccacc 419 |||||||||||||||| |||||||||||||||||||||| || ||||||||||| |||| Sbjct: 2358 agtcacactggattgggagaaactactacaaaagaggtcatgatggcaatgacattcacc 2417 Query: 420 agacaaatgttccccacattaggatcgaattccgacacaacatttggaaagaggagatgg 479 ||||||||||||| ||||| ||||| ||||||||||||| ||||||||||| || |||| Sbjct: 2418 agacaaatgttcctcacatcaggattgaattccgacacactatttggaaagaagaaatgg 2477 Query: 480 agctgatacat 490 |||| |||||| Sbjct: 2478 agctaatacat 2488
>gb|AY107533.1| Zea mays PCO130446 mRNA sequence Length = 2196 Score = 484 bits (244), Expect = e-133 Identities = 448/516 (86%) Strand = Plus / Plus Query: 17 gctgcagcatttctcacttctcacaatattgctcacggggtgaacttaaagaagtcccct 76 |||||||||||||| ||||| || || |||||||| ||||||||| ||||||| |||||| Sbjct: 1343 gctgcagcatttcttacttcacataacattgctcatggggtgaacctaaagaaatcccct 1402 Query: 77 gtcctccagtacttgtattatcttgctcagattggtcttgcaatgtctcctttgagcaac 136 || || |||||| ||||||||||||||||||||||||| ||||||||||| || || ||| Sbjct: 1403 gtacttcagtacctgtattatcttgctcagattggtctagcaatgtctcccttaagtaac 1462 Query: 137 aactcattgtttattgactaccaccggaaccctttcccaacatttttcctaagaggcctg 196 |||||| ||||||| ||||| || |||||||||||||||||||||||| |||| || || Sbjct: 1463 aactcactgtttatcgactatcatcggaaccctttcccaacatttttcttaaggggtctt 1522 Query: 197 aatgtttctctctcaaccgacgaccctttgcaaattcacctaacaaaagaacctttggtt 256 || || ||||| || || ||||||||| | ||||||||||| || || |||||||||||| Sbjct: 1523 aacgtgtctctttcgactgacgaccctctacaaattcacctgacgaaggaacctttggtt 1582 Query: 257 gaagaatacagtgtcgctgcttcgctgtggaagcttagctcttgtgacttgtgtgagata 316 |||||||||||||| |||||||| || |||||||| ||||| |||||||||||||| || Sbjct: 1583 gaagaatacagtgttgctgcttcactttggaagctgagctcatgtgacttgtgtgaaatc 1642 Query: 317 gccaggaattctgtgtaccagtccggtttctctcataggctaaagtcacactggattggt 376 || || |||||||| ||||||||||| |||||||| ||||| ||||| |||||||| || Sbjct: 1643 gctagaaattctgtctaccagtccggattctctcacaggctcaagtctcactggatcggg 1702 Query: 377 agaaactactacaaaagaggtcccgacggcaatgacatccaccagacaaatgttccccac 436 ||||||||||||| ||| ||||| || ||||||||||||||||||||||||||||| ||| Sbjct: 1703 agaaactactacagaaggggtccggagggcaatgacatccaccagacaaatgttcctcac 1762 Query: 437 attaggatcgaattccgacacaacatttggaaagaggagatggagctgatacatttcgga 496 || ||| | ||||| ||||||| || |||||||| || ||||||||||||||||| ||| Sbjct: 1763 atcagggttgaatttcgacacactatctggaaagaagaaatggagctgatacattttgga 1822 Query: 497 aacgttaacctaccggaagaaaccgacaggtgaaga 532 || ||||||||||| |||||| |||||||||||| Sbjct: 1823 aatgttaacctacccgaagaagttgacaggtgaaga 1858
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 254 bits (128), Expect = 3e-64 Identities = 164/176 (93%) Strand = Plus / Plus Query: 105 agattggtcttgcaatgtctcctttgagcaacaactcattgtttattgactaccaccgga 164 ||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||| | Sbjct: 29457337 agattggtcttgccatgtctcctttgagcaacaactcattgtttattgattatcaccgaa 29457396 Query: 165 accctttcccaacatttttcctaagaggcctgaatgtttctctctcaaccgacgaccctt 224 ||||||||||||||||||||||||||||||| || |||||||| |||||||| ||||||| Sbjct: 29457397 accctttcccaacatttttcctaagaggccttaacgtttctctatcaaccgatgaccctt 29457456 Query: 225 tgcaaattcacctaacaaaagaacctttggttgaagaatacagtgtcgctgcttcg 280 ||||||||||||| |||||||||||||||||||||||||| || ||||||||||| Sbjct: 29457457 tgcaaattcacctgacaaaagaacctttggttgaagaatatagcatcgctgcttcg 29457512 Score = 133 bits (67), Expect = 8e-28 Identities = 91/99 (91%) Strand = Plus / Plus Query: 360 agtcacactggattggtagaaactactacaaaagaggtcccgacggcaatgacatccacc 419 |||||||||||||||| |||||||||||||||||||||| || ||||||||||| |||| Sbjct: 29457786 agtcacactggattgggagaaactactacaaaagaggtcatgatggcaatgacattcacc 29457845 Query: 420 agacaaatgttccccacattaggatcgaattccgacaca 458 ||||||||||||| ||||| ||||| ||||||||||||| Sbjct: 29457846 agacaaatgttcctcacatcaggattgaattccgacaca 29457884 Score = 119 bits (60), Expect = 1e-23 Identities = 96/107 (89%), Gaps = 1/107 (0%) Strand = Plus / Plus Query: 1 gagatattgatn-tctcgctgcagcatttctcacttctcacaatattgctcacggggtga 59 ||||||||||| ||| |||||||||||||| |||||||| ||||||||||||||||| | Sbjct: 29457106 gagatattgatcatcttgctgcagcatttcttacttctcataatattgctcacggggtta 29457165 Query: 60 acttaaagaagtcccctgtcctccagtacttgtattatcttgctcag 106 | |||||||||||||||||||||||||| ||||||| || |||||| Sbjct: 29457166 atttaaagaagtcccctgtcctccagtatctgtattacctagctcag 29457212 Score = 75.8 bits (38), Expect = 2e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 280 gctgtggaagcttagctcttgtgacttgtgtgagatagccaggaattctgtgtaccagtc 339 |||||||||||| || || || ||| | ||||| || || |||||||||||||||||||| Sbjct: 29457599 gctgtggaagctaagttcatgcgacctatgtgaaattgctaggaattctgtgtaccagtc 29457658 Query: 340 cggtttctctcataggct 357 ||||||||||||||||| Sbjct: 29457659 tggtttctctcataggct 29457676
>dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0034A04 Length = 151263 Score = 254 bits (128), Expect = 3e-64 Identities = 164/176 (93%) Strand = Plus / Plus Query: 105 agattggtcttgcaatgtctcctttgagcaacaactcattgtttattgactaccaccgga 164 ||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||| | Sbjct: 120259 agattggtcttgccatgtctcctttgagcaacaactcattgtttattgattatcaccgaa 120318 Query: 165 accctttcccaacatttttcctaagaggcctgaatgtttctctctcaaccgacgaccctt 224 ||||||||||||||||||||||||||||||| || |||||||| |||||||| ||||||| Sbjct: 120319 accctttcccaacatttttcctaagaggccttaacgtttctctatcaaccgatgaccctt 120378 Query: 225 tgcaaattcacctaacaaaagaacctttggttgaagaatacagtgtcgctgcttcg 280 ||||||||||||| |||||||||||||||||||||||||| || ||||||||||| Sbjct: 120379 tgcaaattcacctgacaaaagaacctttggttgaagaatatagcatcgctgcttcg 120434 Score = 133 bits (67), Expect = 8e-28 Identities = 91/99 (91%) Strand = Plus / Plus Query: 360 agtcacactggattggtagaaactactacaaaagaggtcccgacggcaatgacatccacc 419 |||||||||||||||| |||||||||||||||||||||| || ||||||||||| |||| Sbjct: 120708 agtcacactggattgggagaaactactacaaaagaggtcatgatggcaatgacattcacc 120767 Query: 420 agacaaatgttccccacattaggatcgaattccgacaca 458 ||||||||||||| ||||| ||||| ||||||||||||| Sbjct: 120768 agacaaatgttcctcacatcaggattgaattccgacaca 120806 Score = 119 bits (60), Expect = 1e-23 Identities = 96/107 (89%), Gaps = 1/107 (0%) Strand = Plus / Plus Query: 1 gagatattgatn-tctcgctgcagcatttctcacttctcacaatattgctcacggggtga 59 ||||||||||| ||| |||||||||||||| |||||||| ||||||||||||||||| | Sbjct: 120028 gagatattgatcatcttgctgcagcatttcttacttctcataatattgctcacggggtta 120087 Query: 60 acttaaagaagtcccctgtcctccagtacttgtattatcttgctcag 106 | |||||||||||||||||||||||||| ||||||| || |||||| Sbjct: 120088 atttaaagaagtcccctgtcctccagtatctgtattacctagctcag 120134 Score = 75.8 bits (38), Expect = 2e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 280 gctgtggaagcttagctcttgtgacttgtgtgagatagccaggaattctgtgtaccagtc 339 |||||||||||| || || || ||| | ||||| || || |||||||||||||||||||| Sbjct: 120521 gctgtggaagctaagttcatgcgacctatgtgaaattgctaggaattctgtgtaccagtc 120580 Query: 340 cggtttctctcataggct 357 ||||||||||||||||| Sbjct: 120581 tggtttctctcataggct 120598
>gb|AY109001.1| Zea mays PCO134657 mRNA sequence Length = 1911 Score = 194 bits (98), Expect = 3e-46 Identities = 272/330 (82%) Strand = Plus / Plus Query: 67 gaagtcccctgtcctccagtacttgtattatcttgctcagattggtcttgcaatgtctcc 126 |||||| ||||| || ||||||||||| ||||||| |||||||||||| || ||||| || Sbjct: 1272 gaagtctcctgtgcttcagtacttgtactatcttggtcagattggtctggcgatgtcccc 1331 Query: 127 tttgagcaacaactcattgtttattgactaccaccggaaccctttcccaacatttttcct 186 |||||||||||||| || ||| ||||||| || || |||||||| ||||| || |||| Sbjct: 1332 attgagcaacaactccttatttcttgactatcatcgcaacccttttccaacgttcttcca 1391 Query: 187 aagaggcctgaatgtttctctctcaaccgacgaccctttgcaaattcacctaacaaaaga 246 | |||| |||||||| || | || || || |||||||||||||||||||| |||||||| Sbjct: 1392 acgaggtctgaatgtctcattatctacggatgaccctttgcaaattcacctgacaaaaga 1451 Query: 247 acctttggttgaagaatacagtgtcgctgcttcgctgtggaagcttagctcttgtgactt 306 ||| ||||| ||||||||||| | |||||||||||||||||||| || |||||||| || Sbjct: 1452 accattggtggaagaatacagcattgctgcttcgctgtggaagctcagttcttgtgattt 1511 Query: 307 gtgtgagatagccaggaattctgtgtaccagtccggtttctctcataggctaaagtcaca 366 || || || || ||||| ||||| ||||| || || || || ||| || ||| | || Sbjct: 1512 atgcgaaattgcgaggaactctgtttaccaatctgggttttcacatgctctcaaggcgca 1571 Query: 367 ctggattggtagaaactactacaaaagagg 396 ||||||||||| ||||||| ||||||||| Sbjct: 1572 ctggattggtaagaactacttcaaaagagg 1601
>dbj|AK058281.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D05, full insert sequence Length = 1599 Score = 178 bits (90), Expect = 1e-41 Identities = 249/302 (82%) Strand = Plus / Plus Query: 95 tatcttgctcagattggtcttgcaatgtctcctttgagcaacaactcattgtttattgac 154 ||||||| ||||||||||| |||||||| || || ||||||||||| |||||| |||| Sbjct: 760 tatcttggccagattggtctggcaatgtccccattaagcaacaactccttgtttcttgat 819 Query: 155 taccaccggaaccctttcccaacatttttcctaagaggcctgaatgtttctctctcaacc 214 ||||||||||| |||||||||| ||||||| | |||||||||||||||| || ||||| Sbjct: 820 taccaccggaatcctttcccaatgtttttccaacgaggcctgaatgtttccctgtcaacg 879 Query: 215 gacgaccctttgcaaattcacctaacaaaagaacctttggttgaagaatacagtgtcgct 274 || || || |||||||||||||| |||||||| || ||||| ||||||||||| | ||| Sbjct: 880 gatgatccattgcaaattcacctgacaaaagagccattggtggaagaatacagcattgct 939 Query: 275 gcttcgctgtggaagcttagctcttgtgacttgtgtgagatagccaggaattctgtgtac 334 ||||| || |||||||| || |||||||| || ||||| ||||| || || ||||| || Sbjct: 940 gcttcactctggaagctcagttcttgtgatttatgtgaaatagctagaaactctgtctat 999 Query: 335 cagtccggtttctctcataggctaaagtcacactggattggtagaaactactacaaaaga 394 || || || || || ||| || ||| ||||||||||||| | ||||| ||||||||| Sbjct: 1000 caatcagggttttcacatgctctcaaggcacactggattggcaagaactattacaaaaga 1059 Query: 395 gg 396 || Sbjct: 1060 gg 1061
>gb|AC144742.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0052F16, complete sequence Length = 162082 Score = 153 bits (77), Expect = 9e-34 Identities = 143/165 (86%) Strand = Plus / Minus Query: 103 tcagattggtcttgcaatgtctcctttgagcaacaactcattgtttattgactaccaccg 162 |||||||||||| |||||||| || || ||||||||||| |||||| |||| |||||||| Sbjct: 134846 tcagattggtctggcaatgtccccattaagcaacaactccttgtttcttgattaccaccg 134787 Query: 163 gaaccctttcccaacatttttcctaagaggcctgaatgtttctctctcaaccgacgaccc 222 ||| |||||||||| ||||||| | |||||||||||||||| || ||||| || || || Sbjct: 134786 gaatcctttcccaatgtttttccaacgaggcctgaatgtttccctgtcaacggatgatcc 134727 Query: 223 tttgcaaattcacctaacaaaagaacctttggttgaagaatacag 267 |||||||||||||| |||||||| || ||||| ||||||||||| Sbjct: 134726 attgcaaattcacctgacaaaagagccattggtggaagaatacag 134682
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 153 bits (77), Expect = 9e-34 Identities = 143/165 (86%) Strand = Plus / Minus Query: 103 tcagattggtcttgcaatgtctcctttgagcaacaactcattgtttattgactaccaccg 162 |||||||||||| |||||||| || || ||||||||||| |||||| |||| |||||||| Sbjct: 16343493 tcagattggtctggcaatgtccccattaagcaacaactccttgtttcttgattaccaccg 16343434 Query: 163 gaaccctttcccaacatttttcctaagaggcctgaatgtttctctctcaaccgacgaccc 222 ||| |||||||||| ||||||| | |||||||||||||||| || ||||| || || || Sbjct: 16343433 gaatcctttcccaatgtttttccaacgaggcctgaatgtttccctgtcaacggatgatcc 16343374 Query: 223 tttgcaaattcacctaacaaaagaacctttggttgaagaatacag 267 |||||||||||||| |||||||| || ||||| ||||||||||| Sbjct: 16343373 attgcaaattcacctgacaaaagagccattggtggaagaatacag 16343329
>gb|BT009533.1| Triticum aestivum clone wr1.pk0133.f5:fis, full insert mRNA sequence Length = 1820 Score = 135 bits (68), Expect = 2e-28 Identities = 221/272 (81%) Strand = Plus / Plus Query: 62 ttaaagaagtcccctgtcctccagtacttgtattatcttgctcagattggtcttgcaatg 121 |||| |||||| ||||| || || ||| |||| || |||| |||||||||||| |||||| Sbjct: 617 ttaaggaagtctcctgtgcttcaatacctgtactaccttggtcagattggtctggcaatg 676 Query: 122 tctcctttgagcaacaactcattgtttattgactaccaccggaaccctttcccaacattt 181 || ||| | ||||||||||| |||||| |||| ||||| ||||||||||| || | ||| Sbjct: 677 tcccctctcagcaacaactccttgtttcttgattaccatcggaacccttttcctatgttt 736 Query: 182 ttcctaagaggcctgaatgtttctctctcaaccgacgaccctttgcaaattcacctaaca 241 |||| | |||| |||||||| || || || || || || || ||||||||||| || ||| Sbjct: 737 ttccaacgaggactgaatgtctcgctgtccacggatgatccattgcaaattcatctgaca 796 Query: 242 aaagaacctttggttgaagaatacagtgtcgctgcttcgctgtggaagcttagctcttgt 301 ||||| || ||||| ||||||||||| | ||||| ||||| |||||||| || |||||| Sbjct: 797 aaagagccattggtggaagaatacagcattgctgcctcgctatggaagctcagttcttgt 856 Query: 302 gacttgtgtgagatagccaggaattctgtgta 333 || | ||||| || || || ||||||||||| Sbjct: 857 gatctatgtgaaattgcgagaaattctgtgta 888
>ref|NM_179963.1| Arabidopsis thaliana FAC1 (EMBRYONIC FACTOR1); AMP deaminase AT2G38280 (FAC1) transcript variant AT2G38280.2 mRNA, complete cds Length = 2797 Score = 85.7 bits (43), Expect = 2e-13 Identities = 292/375 (77%) Strand = Plus / Plus Query: 104 cagattggtcttgcaatgtctcctttgagcaacaactcattgtttattgactaccaccgg 163 ||||||||||| || ||||| || ||||||||||||| |||||| | || ||||||||| Sbjct: 2178 cagattggtctggccatgtcaccactgagcaacaactctttgtttctagattaccaccgg 2237 Query: 164 aaccctttcccaacatttttcctaagaggcctgaatgtttctctctcaaccgacgaccct 223 ||||| || || |||||| ||||||| || ||||||||||| || || || ||||| Sbjct: 2238 aacccgtttcctgtgtttttcttaagaggtctcaatgtttctctgtctactgatgacccc 2297 Query: 224 ttgcaaattcacctaacaaaagaacctttggttgaagaatacagtgtcgctgcttcgctg 283 | || |||||| |||| ||||||||| | || ||||| || || | ||||| || | Sbjct: 2298 cttcagattcacttaactaaagaacctctcgtggaagagtatagcatagctgcatcagtt 2357 Query: 284 tggaagcttagctcttgtgacttgtgtgagatagccaggaattctgtgtaccagtccggt 343 |||||||| || | |||||| |||| |||||||| | || || ||||||||||| ||| Sbjct: 2358 tggaagctgagtgcgtgtgacctgtgcgagatagctcgtaactcagtgtaccagtcaggt 2417 Query: 344 ttctctcataggctaaagtcacactggattggtagaaactactacaaaagaggtcccgac 403 ||||| || || ||||| ||||||||||| | | | |||||||||||||| || || Sbjct: 2418 ttctcacacgccctgaagtcgcactggattggaaaagattactacaaaagaggacctgat 2477 Query: 404 ggcaatgacatccaccagacaaatgttccccacattaggatcgaattccgacacaacatt 463 || || ||||| ||| | ||||| || || ||||| ||| | || ||||| ||| || Sbjct: 2478 ggaaacgacattcacaaaacaaacgtgccacacataagggtggagttccgtgacacgatc 2537 Query: 464 tggaaagaggagatg 478 ||||||||||||||| Sbjct: 2538 tggaaagaggagatg 2552
>ref|NM_129384.2| Arabidopsis thaliana FAC1 (EMBRYONIC FACTOR1); AMP deaminase AT2G38280 (FAC1) transcript variant AT2G38280.1 mRNA, complete cds Length = 2835 Score = 85.7 bits (43), Expect = 2e-13 Identities = 292/375 (77%) Strand = Plus / Plus Query: 104 cagattggtcttgcaatgtctcctttgagcaacaactcattgtttattgactaccaccgg 163 ||||||||||| || ||||| || ||||||||||||| |||||| | || ||||||||| Sbjct: 2178 cagattggtctggccatgtcaccactgagcaacaactctttgtttctagattaccaccgg 2237 Query: 164 aaccctttcccaacatttttcctaagaggcctgaatgtttctctctcaaccgacgaccct 223 ||||| || || |||||| ||||||| || ||||||||||| || || || ||||| Sbjct: 2238 aacccgtttcctgtgtttttcttaagaggtctcaatgtttctctgtctactgatgacccc 2297 Query: 224 ttgcaaattcacctaacaaaagaacctttggttgaagaatacagtgtcgctgcttcgctg 283 | || |||||| |||| ||||||||| | || ||||| || || | ||||| || | Sbjct: 2298 cttcagattcacttaactaaagaacctctcgtggaagagtatagcatagctgcatcagtt 2357 Query: 284 tggaagcttagctcttgtgacttgtgtgagatagccaggaattctgtgtaccagtccggt 343 |||||||| || | |||||| |||| |||||||| | || || ||||||||||| ||| Sbjct: 2358 tggaagctgagtgcgtgtgacctgtgcgagatagctcgtaactcagtgtaccagtcaggt 2417 Query: 344 ttctctcataggctaaagtcacactggattggtagaaactactacaaaagaggtcccgac 403 ||||| || || ||||| ||||||||||| | | | |||||||||||||| || || Sbjct: 2418 ttctcacacgccctgaagtcgcactggattggaaaagattactacaaaagaggacctgat 2477 Query: 404 ggcaatgacatccaccagacaaatgttccccacattaggatcgaattccgacacaacatt 463 || || ||||| ||| | ||||| || || ||||| ||| | || ||||| ||| || Sbjct: 2478 ggaaacgacattcacaaaacaaacgtgccacacataagggtggagttccgtgacacgatc 2537 Query: 464 tggaaagaggagatg 478 ||||||||||||||| Sbjct: 2538 tggaaagaggagatg 2552
>gb|AY133852.1| Arabidopsis thaliana clone U10978 putative AMP deaminase (At2g38280) mRNA, complete cds Length = 2551 Score = 85.7 bits (43), Expect = 2e-13 Identities = 292/375 (77%) Strand = Plus / Plus Query: 104 cagattggtcttgcaatgtctcctttgagcaacaactcattgtttattgactaccaccgg 163 ||||||||||| || ||||| || ||||||||||||| |||||| | || ||||||||| Sbjct: 2095 cagattggtctggccatgtcaccactgagcaacaactctttgtttctagattaccaccgg 2154 Query: 164 aaccctttcccaacatttttcctaagaggcctgaatgtttctctctcaaccgacgaccct 223 ||||| || || |||||| ||||||| || ||||||||||| || || || ||||| Sbjct: 2155 aacccgtttcctgtgtttttcttaagaggtctcaatgtttctctgtctactgatgacccc 2214 Query: 224 ttgcaaattcacctaacaaaagaacctttggttgaagaatacagtgtcgctgcttcgctg 283 | || |||||| |||| ||||||||| | || ||||| || || | ||||| || | Sbjct: 2215 cttcagattcacttaactaaagaacctctcgtggaagagtatagcatagctgcatcagtt 2274 Query: 284 tggaagcttagctcttgtgacttgtgtgagatagccaggaattctgtgtaccagtccggt 343 |||||||| || | |||||| |||| |||||||| | || || ||||||||||| ||| Sbjct: 2275 tggaagctgagtgcgtgtgacctgtgcgagatagctcgtaactcagtgtaccagtcaggt 2334 Query: 344 ttctctcataggctaaagtcacactggattggtagaaactactacaaaagaggtcccgac 403 ||||| || || ||||| ||||||||||| | | | |||||||||||||| || || Sbjct: 2335 ttctcacacgccctgaagtcgcactggattggaaaagattactacaaaagaggacctgat 2394 Query: 404 ggcaatgacatccaccagacaaatgttccccacattaggatcgaattccgacacaacatt 463 || || ||||| ||| | ||||| || || ||||| ||| | || ||||| ||| || Sbjct: 2395 ggaaacgacattcacaaaacaaacgtgccacacataagggtggagttccgtgacacgatc 2454 Query: 464 tggaaagaggagatg 478 ||||||||||||||| Sbjct: 2455 tggaaagaggagatg 2469
>gb|AY056301.1| Arabidopsis thaliana putative AMP deaminase (At2g38280) mRNA, complete cds Length = 2847 Score = 85.7 bits (43), Expect = 2e-13 Identities = 292/375 (77%) Strand = Plus / Plus Query: 104 cagattggtcttgcaatgtctcctttgagcaacaactcattgtttattgactaccaccgg 163 ||||||||||| || ||||| || ||||||||||||| |||||| | || ||||||||| Sbjct: 2178 cagattggtctggccatgtcaccactgagcaacaactctttgtttctagattaccaccgg 2237 Query: 164 aaccctttcccaacatttttcctaagaggcctgaatgtttctctctcaaccgacgaccct 223 ||||| || || |||||| ||||||| || ||||||||||| || || || ||||| Sbjct: 2238 aacccgtttcctgtgtttttcttaagaggtctcaatgtttctctgtctactgatgacccc 2297 Query: 224 ttgcaaattcacctaacaaaagaacctttggttgaagaatacagtgtcgctgcttcgctg 283 | || |||||| |||| ||||||||| | || ||||| || || | ||||| || | Sbjct: 2298 cttcagattcacttaactaaagaacctctcgtggaagagtatagcatagctgcatcagtt 2357 Query: 284 tggaagcttagctcttgtgacttgtgtgagatagccaggaattctgtgtaccagtccggt 343 |||||||| || | |||||| |||| |||||||| | || || ||||||||||| ||| Sbjct: 2358 tggaagctgagtgcgtgtgacctgtgcgagatagctcgtaactcagtgtaccagtcaggt 2417 Query: 344 ttctctcataggctaaagtcacactggattggtagaaactactacaaaagaggtcccgac 403 ||||| || || ||||| ||||||||||| | | | |||||||||||||| || || Sbjct: 2418 ttctcacacgccctgaagtcgcactggattggaaaagattactacaaaagaggacctgat 2477 Query: 404 ggcaatgacatccaccagacaaatgttccccacattaggatcgaattccgacacaacatt 463 || || ||||| ||| | ||||| || || ||||| ||| | || ||||| ||| || Sbjct: 2478 ggaaacgacattcacaaaacaaacgtgccacacataagggtggagttccgtgacacgatc 2537 Query: 464 tggaaagaggagatg 478 ||||||||||||||| Sbjct: 2538 tggaaagaggagatg 2552
>emb|BX819306.1|CNS0AA2Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB67ZA11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 817 Score = 85.7 bits (43), Expect = 2e-13 Identities = 292/375 (77%) Strand = Plus / Plus Query: 104 cagattggtcttgcaatgtctcctttgagcaacaactcattgtttattgactaccaccgg 163 ||||||||||| || ||||| || ||||||||||||| |||||| | || ||||||||| Sbjct: 160 cagattggtctggccatgtcaccactgagcaacaactctttgtttctagattaccaccgg 219 Query: 164 aaccctttcccaacatttttcctaagaggcctgaatgtttctctctcaaccgacgaccct 223 ||||| || || |||||| ||||||| || ||||||||||| || || || ||||| Sbjct: 220 aacccgtttcctgtgtttttcttaagaggtctcaatgtttctctgtctactgatgacccc 279 Query: 224 ttgcaaattcacctaacaaaagaacctttggttgaagaatacagtgtcgctgcttcgctg 283 | || |||||| |||| ||||||||| | || ||||| || || | ||||| || | Sbjct: 280 cttcagattcacttaactaaagaacctctcgtggaagagtatagcatagctgcatcagtt 339 Query: 284 tggaagcttagctcttgtgacttgtgtgagatagccaggaattctgtgtaccagtccggt 343 |||||||| || | |||||| |||| |||||||| | || || ||||||||||| ||| Sbjct: 340 tggaagctgagtgcgtgtgacctgtgcgagatagctcgtaactcagtgtaccagtcaggt 399 Query: 344 ttctctcataggctaaagtcacactggattggtagaaactactacaaaagaggtcccgac 403 ||||| || || ||||| ||||||||||| | | | |||||||||||||| || || Sbjct: 400 ttctcacacgccctgaagtcgcactggattggaaaagattactacaaaagaggacctgat 459 Query: 404 ggcaatgacatccaccagacaaatgttccccacattaggatcgaattccgacacaacatt 463 || || ||||| ||| | ||||| || || ||||| ||| | || ||||| ||| || Sbjct: 460 ggaaacgacattcacaaaacaaacgtgccacacataagggtggagttccgtgacacgatc 519 Query: 464 tggaaagaggagatg 478 ||||||||||||||| Sbjct: 520 tggaaagaggagatg 534
>gb|AY664413.1| Zea mays cultivar B73 locus 9002, complete sequence Length = 317137 Score = 81.8 bits (41), Expect = 3e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 366 actggattggtagaaactactacaaaagaggtcccgacggcaatgacatccaccagacaa 425 |||||||||| ||||||||||| | ||| |||| || |||||||||||||| |||||| Sbjct: 199241 actggattgggagaaactactatagaaggggtctggagagcaatgacatccactagacaa 199300 Query: 426 atgttccccacattagg 442 ||||||||||||||||| Sbjct: 199301 atgttccccacattagg 199317 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Plus Query: 284 tggaagcttagctcttgtgacttgtgtgagatagccaggaattctgtgtaccagtccggt 343 |||||||| ||||| ||||||||||| || || || || |||| ||| ||||| ||| || Sbjct: 199069 tggaagctgagctcatgtgacttgtgcgaaatcgctagaaattatgtctaccaatccagt 199128 Query: 344 ttctctcataggct 357 |||||||||||||| Sbjct: 199129 ttctctcataggct 199142 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 476 atggagctgatacatttcggaaacgttaa 504 ||||||||||||||||| ||||| ||||| Sbjct: 199445 atggagctgatacattttggaaatgttaa 199473
>gb|AC003028.3| Arabidopsis thaliana chromosome 2 clone F16M14 map ve018, complete sequence Length = 115359 Score = 69.9 bits (35), Expect = 1e-08 Identities = 119/147 (80%) Strand = Plus / Minus Query: 104 cagattggtcttgcaatgtctcctttgagcaacaactcattgtttattgactaccaccgg 163 ||||||||||| || ||||| || ||||||||||||| |||||| | || ||||||||| Sbjct: 102317 cagattggtctggccatgtcaccactgagcaacaactctttgtttctagattaccaccgg 102258 Query: 164 aaccctttcccaacatttttcctaagaggcctgaatgtttctctctcaaccgacgaccct 223 ||||| || || |||||| ||||||| || ||||||||||| || || || ||||| Sbjct: 102257 aacccgtttcctgtgtttttcttaagaggtctcaatgtttctctgtctactgatgacccc 102198 Query: 224 ttgcaaattcacctaacaaaagaacct 250 | || |||||| |||| ||||||||| Sbjct: 102197 cttcagattcacttaactaaagaacct 102171
>gb|M38126.1|RATAMPD2 Rattus norvegicus AMP deaminase (ampd2) gene, partial cds Length = 562 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 72 cccctgtcctccagtacttgtattatcttgctcagattgg 111 |||||||||| |||||| |||||||||| ||||||||||| Sbjct: 370 cccctgtcctgcagtacctgtattatctggctcagattgg 409
>gb|AC140721.15| Medicago truncatula clone mth2-16c16, complete sequence Length = 128119 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 227 caaattcacctaacaaaagaacctttggttgaagaatacagtgtcgctgcttc 279 ||||| ||||||||||| ||||| ||||||||||| || ||| | |||||||| Sbjct: 31771 caaatccacctaacaaaggaaccgttggttgaagagtatagtatagctgcttc 31719 Score = 44.1 bits (22), Expect = 0.57 Identities = 34/38 (89%) Strand = Plus / Minus Query: 104 cagattggtcttgcaatgtctcctttgagcaacaactc 141 |||||||| |||||||||||||| ||||||| ||||| Sbjct: 31894 cagattggacttgcaatgtctcccctgagcaataactc 31857
>gb|BC099782.1| Rattus norvegicus cDNA clone IMAGE:7933407, with apparent retained intron Length = 4313 Score = 48.1 bits (24), Expect = 0.036 Identities = 36/40 (90%) Strand = Plus / Plus Query: 72 cccctgtcctccagtacttgtattatcttgctcagattgg 111 |||||||||| |||||| ||||||| || ||||||||||| Sbjct: 2779 cccctgtcctgcagtacctgtattacctggctcagattgg 2818
>ref|XM_342313.2| PREDICTED: Rattus norvegicus similar to adenosine monophosphate deaminase 2 (isoform L) (LOC362015), mRNA Length = 3371 Score = 48.1 bits (24), Expect = 0.036 Identities = 36/40 (90%) Strand = Plus / Plus Query: 72 cccctgtcctccagtacttgtattatcttgctcagattgg 111 |||||||||| |||||| ||||||| || ||||||||||| Sbjct: 2050 cccctgtcctgcagtacctgtattacctggctcagattgg 2089
>gb|BC056568.1| Danio rerio cDNA clone IMAGE:6799414, partial cds Length = 2716 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 464 tggaaagaggagatggagctga 485 |||||||||||||||||||||| Sbjct: 98 tggaaagaggagatggagctga 119
>ref|XM_690514.1| PREDICTED: Danio rerio similar to ADP-ribosylation factor-like 10B (LOC567222), mRNA Length = 1921 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 464 tggaaagaggagatggagctga 485 |||||||||||||||||||||| Sbjct: 49 tggaaagaggagatggagctga 70
>emb|CR717663.2|CNS0GGP1 Tetraodon nigroviridis full-length cDNA Length = 1025 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Plus Query: 280 gctgtggaagcttagctcttgtgacttgtgtgagatagccaggaa 324 |||||||||||| ||| | |||||| |||| ||||| |||||||| Sbjct: 757 gctgtggaagctcagcacctgtgacgtgtgcgagatcgccaggaa 801
>gb|AC022536.13| Homo sapiens chromosome 10 clone RP11-38M7, complete sequence Length = 160678 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 187 aagaggcctgaatgtttctct 207 ||||||||||||||||||||| Sbjct: 24469 aagaggcctgaatgtttctct 24449
>gb|AC005375.4|AC005375 Homo sapiens chromosome 17, clone hRPK.388_F_14, complete sequence Length = 149030 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 355 gctaaagtcacactggattgg 375 ||||||||||||||||||||| Sbjct: 95549 gctaaagtcacactggattgg 95569
>emb|CR936328.1| Medicago truncatula chromosome 5 clone mth4-1f18, COMPLETE SEQUENCE Length = 194592 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 376 tagaaactactacaaaagagg 396 ||||||||||||||||||||| Sbjct: 154176 tagaaactactacaaaagagg 154196
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 465 ggaaagaggagatggagctga 485 ||||||||||||||||||||| Sbjct: 268830 ggaaagaggagatggagctga 268850
>ref|NM_118261.3| Arabidopsis thaliana kinase AT4G21410 mRNA, complete cds Length = 2220 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 621 tggtctgtgtagaagagaag 640 |||||||||||||||||||| Sbjct: 286 tggtctgtgtagaagagaag 305
>gb|AC120871.12| Mus musculus chromosome 16, clone RP23-121E8, complete sequence Length = 218995 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 ctcctttgagcaacaactcattgt 146 ||||||||||||||||||| |||| Sbjct: 91346 ctcctttgagcaacaactccttgt 91369
>gb|AC157574.6| Mus musculus BAC clone RP23-1G17 from chromosome 8, complete sequence Length = 216443 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 cagcatttctcacttctcac 40 |||||||||||||||||||| Sbjct: 215452 cagcatttctcacttctcac 215471
>ref|XM_717533.1| Candida albicans SC5314 hypothetical protein (CaO19_1584), mRNA Length = 1533 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 tcttgcaatgtctcctttga 131 |||||||||||||||||||| Sbjct: 633 tcttgcaatgtctcctttga 652
>ref|XM_717392.1| Candida albicans SC5314 hypothetical protein (CaO19_9157), mRNA Length = 1533 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 tcttgcaatgtctcctttga 131 |||||||||||||||||||| Sbjct: 633 tcttgcaatgtctcctttga 652
>gb|AC123067.4| Mus musculus BAC clone RP23-20M6 from chromosome 12, complete sequence Length = 200251 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 cctttgagcaacaactcatt 144 |||||||||||||||||||| Sbjct: 95173 cctttgagcaacaactcatt 95192
>gb|AC122527.3| Mus musculus BAC clone RP24-502E10 from chromosome 6, complete sequence Length = 180682 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaaagaggagatggagctga 485 |||||||||||||||||||| Sbjct: 17228 gaaagaggagatggagctga 17209
>emb|CT010512.8| Mouse DNA sequence from clone RP23-283M18 on chromosome 16, complete sequence Length = 202415 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 ctcctttgagcaacaactcattgt 146 ||||||||||||||||||| |||| Sbjct: 54245 ctcctttgagcaacaactccttgt 54268
>gb|AC125171.4| Mus musculus BAC clone RP24-475M20 from chromosome 6, complete sequence Length = 167590 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaaagaggagatggagctga 485 |||||||||||||||||||| Sbjct: 31868 gaaagaggagatggagctga 31849
>emb|BX649215.1| Human DNA sequence from clone RP11-575L16 on chromosome 10 Contains a novel pseudogene (FLJ12916) (MGC5560), a Ras homolog enriched in brain (RHEB) pseudogene and a CpG island, complete sequence Length = 77278 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 aaattcacctaacaaaagaa 247 |||||||||||||||||||| Sbjct: 2135 aaattcacctaacaaaagaa 2116
>emb|AL731733.9| Human DNA sequence from clone RP11-508M1 on chromosome 10 Contains a centaurin gamma-like family member 9 pseudogene (CTGLF9P), a BMS1L pseudogene 5 (BMS1LP5), a dual specificity phosphatase 8 (DUSP8) pseudogene, a glutamate dehydrogenase pseudogene 2 (GLUDP2), a cathepsin L-like 3 pseudogene (CTCLL3), three novel genes and three CpG islands, complete sequence Length = 211345 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 aaattcacctaacaaaagaa 247 |||||||||||||||||||| Sbjct: 178785 aaattcacctaacaaaagaa 178766
>emb|AL356056.22| Human DNA sequence from clone RP11-38L15 on chromosome 10 Contains a gene for a protein similar to FLJ12916, two novel genes, the gene for synaptotagmin (CHR10SYT), a Ras homolog enriched in brain 2 (RHEB2) pseudogene, the 5' end of a novel gene (LOC142964) and two CpG islands, complete sequence Length = 183976 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 aaattcacctaacaaaagaa 247 |||||||||||||||||||| Sbjct: 60698 aaattcacctaacaaaagaa 60679
>emb|AL161781.12| Human DNA sequence from clone RP11-297B17 on chromosome 9 Contains the 5' end of the PAX5 gene for paired box gene 5 (B-cell lineage specific activator protein) (BSAP), a ribosomal protein L32 (RPL32) pseudogene and five CpG islands, complete sequence Length = 159096 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 agaagtcccctgtcctccag 85 |||||||||||||||||||| Sbjct: 117892 agaagtcccctgtcctccag 117873
>emb|AL136982.11| Human DNA sequence from clone RP11-96C23 on chromosome 10 Contains a KIAA0187 pseudogene, the gene for adipose specific 2 (APM2), the FAM25A gene for family with sequence similarity 25, member A, five novel genes, the GLUD1 gene for glutamate dehydrogenase 1, the 5' end of a novel gene and four CpG islands, complete sequence Length = 182959 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 aaattcacctaacaaaagaa 247 |||||||||||||||||||| Sbjct: 159498 aaattcacctaacaaaagaa 159479
>ref|XM_779765.1| PREDICTED: Strongylocentrotus purpuratus similar to Ubiquitin carboxyl-terminal hydrolase 8 (Ubiquitin thiolesterase 8) (Ubiquitin-specific processing protease 8) (Deubiquitinating enzyme 8) (hUBPy) (LOC579661), mRNA Length = 3273 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 535 ttgcagcagttctcaaagcc 554 |||||||||||||||||||| Sbjct: 2755 ttgcagcagttctcaaagcc 2774
>emb|AL591497.2| Zebrafish DNA sequence from clone BUSM1-173M20 in linkage group 7 Contains the nitr1.14, nitr1.17, nitr1.18, nitr2.4, nitr2.6, nitr3r.2, nitr1.13, nitr1.15, nitr1.16, nitr2.5, nitr3.4 and nitr3r.1 genes for novel immune-type receptors and a nitr pseudogene, complete sequence Length = 127998 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 aatgtctcctttgagcaaca 137 |||||||||||||||||||| Sbjct: 96576 aatgtctcctttgagcaaca 96557
>emb|AL161555.2|ATCHRIV55 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 55 Length = 194916 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 621 tggtctgtgtagaagagaag 640 |||||||||||||||||||| Sbjct: 22635 tggtctgtgtagaagagaag 22616
>emb|AL031187.1|ATT6K22 Arabidopsis thaliana DNA chromosome 4, BAC clone T6K22 (ESSAII project) Length = 89219 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 621 tggtctgtgtagaagagaag 640 |||||||||||||||||||| Sbjct: 73073 tggtctgtgtagaagagaag 73054
>emb|AL022603.1|ATF18E5 Arabidopsis thaliana DNA chromosome 4, BAC clone F18E5 (ESSAII project) Length = 95266 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 621 tggtctgtgtagaagagaag 640 |||||||||||||||||||| Sbjct: 9628 tggtctgtgtagaagagaag 9609
>gb|AY074844.1| Arabidopsis thaliana AT4g21410/T6K22_140 mRNA, complete cds Length = 2206 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 621 tggtctgtgtagaagagaag 640 |||||||||||||||||||| Sbjct: 286 tggtctgtgtagaagagaag 305
>dbj|AK155683.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F730201N22 product:unclassifiable, full insert sequence Length = 2637 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaaagaggagatggagctga 485 |||||||||||||||||||| Sbjct: 879 gaaagaggagatggagctga 860
>gb|DP000046.1| Aotus nancymaae target 106 genomic scaffold Length = 387541 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 tcttgcaatgtctcctttga 131 |||||||||||||||||||| Sbjct: 247725 tcttgcaatgtctcctttga 247706
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gaagaatacagtgtcgctgc 276 |||||||||||||||||||| Sbjct: 916914 gaagaatacagtgtcgctgc 916933
>ref|NM_070390.3| Caenorhabditis elegans Y57G11C.13 (Y57G11C.13) mRNA, complete cds Length = 588 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 462 tttggaaagaggagatggag 481 |||||||||||||||||||| Sbjct: 77 tttggaaagaggagatggag 96
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 ccctttcccaacatttttcc 185 |||||||||||||||||||| Sbjct: 16332151 ccctttcccaacatttttcc 16332132
>gb|AC114804.5| Homo sapiens BAC clone RP11-1181A2 from 2, complete sequence Length = 94984 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 458 aacatttggaaagaggagat 477 |||||||||||||||||||| Sbjct: 28946 aacatttggaaagaggagat 28927
>gb|AF322012.1|AF322012S1 Bradyrhizobium japonicum symbiotic gene region, part 1 of 2 Length = 180000 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 ttggttgaagaatacagtgt 270 |||||||||||||||||||| Sbjct: 48382 ttggttgaagaatacagtgt 48401
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 ttggttgaagaatacagtgt 270 |||||||||||||||||||| Sbjct: 1926867 ttggttgaagaatacagtgt 1926886
>dbj|AB185209.1| Caenorhabditis elegans gie mRNA for novel small G protein indispensable for equal chromosome segregation, complete cds Length = 558 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 462 tttggaaagaggagatggag 481 |||||||||||||||||||| Sbjct: 47 tttggaaagaggagatggag 66
>gb|AC155726.4| Mus musculus 6 BAC RP24-180C9 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 187560 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaaagaggagatggagctga 485 |||||||||||||||||||| Sbjct: 167857 gaaagaggagatggagctga 167838
>ref|NM_209568.1| Eremothecium gossypii ADR119Wp (ADR119W), mRNA Length = 2247 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gaagaatacagtgtcgctgc 276 |||||||||||||||||||| Sbjct: 1948 gaagaatacagtgtcgctgc 1967
>emb|Z99281.1|CEY57G11C Caenorhabditis elegans YAC Y57G11C, complete sequence Length = 313573 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 462 tttggaaagaggagatggag 481 |||||||||||||||||||| Sbjct: 160953 tttggaaagaggagatggag 160972
>emb|AL844870.6| Zebrafish DNA sequence from clone BUSM1-169I8 in linkage group 7, complete sequence Length = 132503 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 aatgtctcctttgagcaaca 137 |||||||||||||||||||| Sbjct: 43172 aatgtctcctttgagcaaca 43153
>gb|AC110206.21| Mus musculus chromosome 19, clone RP23-155H17, complete sequence Length = 199583 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 catttctcacttctcacaat 43 |||||||||||||||||||| Sbjct: 84946 catttctcacttctcacaat 84927
>gb|AF093117.1|AF093117 Homo sapiens chromosome 7qtelo BAC E3, complete sequence Length = 147216 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 236 ctaacaaaagaacctttggttgaa 259 |||||||||||||||||| ||||| Sbjct: 87121 ctaacaaaagaacctttgtttgaa 87098
>gb|AY609553.1| Sus scrofa clone Clu_1719.scr.msk.p1.Contig3, mRNA sequence Length = 3019 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 462 tttggaaagaggagatggagctga 485 ||||||| |||||||||||||||| Sbjct: 209 tttggaaggaggagatggagctga 232
>emb|AL606729.3|OSJN00107 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0062B06, complete sequence Length = 187154 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 ccctttcccaacatttttcc 185 |||||||||||||||||||| Sbjct: 177063 ccctttcccaacatttttcc 177044
>emb|AL583883.12| Mouse DNA sequence from clone RP23-400F7 on chromosome 15, complete sequence Length = 209857 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cagcatttctcacttctcac 40 |||||||||||||||||||| Sbjct: 60902 cagcatttctcacttctcac 60883 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,722,640 Number of Sequences: 3902068 Number of extensions: 5722640 Number of successful extensions: 107146 Number of sequences better than 10.0: 68 Number of HSP's better than 10.0 without gapping: 68 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 106846 Number of HSP's gapped (non-prelim): 283 length of query: 650 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 627 effective length of database: 17,143,297,704 effective search space: 10748847660408 effective search space used: 10748847660408 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)