ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd26l05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_470030.1| Oryza sativa (japonica cultivar-group), mRNA 198 1e-47
2ref|XM_478799.1| Oryza sativa (japonica cultivar-group), mRNA 133 7e-28
3ref|XM_507376.1| PREDICTED Oryza sativa (japonica cultivar-group... 133 7e-28
4ref|XM_506420.2| PREDICTED Oryza sativa (japonica cultivar-group... 133 7e-28
5dbj|AK121705.1| Oryza sativa (japonica cultivar-group) cDNA clon... 133 7e-28
6dbj|AK119637.1| Oryza sativa (japonica cultivar-group) cDNA clon... 133 7e-28
7dbj|AK102732.1| Oryza sativa (japonica cultivar-group) cDNA clon... 133 7e-28
8dbj|AK065116.1| Oryza sativa (japonica cultivar-group) cDNA clon... 133 7e-28
9dbj|AK061739.1| Oryza sativa (japonica cultivar-group) cDNA clon... 133 7e-28
10gb|AY108738.1| Zea mays PCO103663 mRNA sequence 131 3e-27
11ref|XM_477068.1| Oryza sativa (japonica cultivar-group), mRNA 121 3e-24
12dbj|AK103449.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 3e-24
13gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 105 2e-19
14gb|AC135958.2| Oryza sativa chromosome 3 BAC OSJNBa0059E14 genom... 105 2e-19
15dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 105 2e-19
16dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 98 4e-17
17dbj|AP003845.3| Oryza sativa (japonica cultivar-group) genomic D... 98 4e-17
18gb|AY112065.1| Zea mays CL4497_1 mRNA sequence 94 6e-16
19dbj|AP003943.3| Oryza sativa (japonica cultivar-group) genomic D... 90 1e-14
20ref|NM_189476.1| Oryza sativa (japonica cultivar-group), predic... 58 3e-05
21dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
22dbj|AP003298.3| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
23dbj|AP003277.2| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
24dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.008
25dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.008
26dbj|AK107760.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.008
27ref|NM_129986.2| Arabidopsis thaliana unknown protein AT2G44220 ... 44 0.52
28ref|NM_193406.1| Oryza sativa (japonica cultivar-group), predic... 44 0.52
29gb|AC044860.11| Homo sapiens chromosome 15, clone RP11-561C5, co... 44 0.52
30emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete ... 44 0.52
31gb|AC135995.7| Homo sapiens chromosome 15, clone RP13-608F4, com... 44 0.52
32gb|AC135735.2| Homo sapiens chromosome 15, clone RP11-1270F20, c... 44 0.52
33gb|AC126605.4| Homo sapiens chromosome 15, clone RP11-606M5, com... 44 0.52
34gb|AC110291.6| Homo sapiens chromosome 15, clone RP11-379H8, com... 44 0.52
35gb|AC108000.5| Homo sapiens chromosome 15, clone CTD-2116G1, com... 44 0.52
36gb|AC127482.10| Homo sapiens chromosome 15, clone CTD-2547M4, co... 44 0.52
37gb|AC005630.1| Homo sapiens PAC clone RP5-1129D5 from 15, comple... 44 0.52
38gb|AC010725.5| Homo sapiens BAC clone RP11-156N7 from 15, comple... 44 0.52
39gb|AC011295.3| Homo sapiens BAC clone RP11-96J23 from 15, comple... 44 0.52
40gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 44 0.52
41gb|AC010724.6|AC010724 Homo sapiens BAC clone RP11-152F13 from 1... 44 0.52
42gb|AC012064.3|AC012064 Homo sapiens BAC clone RP11-123N1 from 15... 44 0.52
43gb|AC126339.6| Homo sapiens chromosome 15, clone RP13-98N21, com... 44 0.52
44gb|AC139425.3| Homo sapiens chromosome 15, clone RP13-996F3, com... 44 0.52
45gb|AC136698.6| Homo sapiens chromosome 15, clone RP13-262C2, com... 44 0.52
46gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 44 0.52
47dbj|AP005325.5| Oryza sativa (japonica cultivar-group) genomic D... 44 0.52
48gb|AY954838.1| Arabidopsis thaliana hypothetical protein (At2g44... 44 0.52
49ref|NM_129989.3| Arabidopsis thaliana unknown protein AT2G44250 ... 42 2.1
50ref|XM_480349.1| Oryza sativa (japonica cultivar-group), mRNA 42 2.1
51ref|XM_470240.1| Oryza sativa (japonica cultivar-group), predic... 42 2.1
52ref|XM_479552.1| Oryza sativa (japonica cultivar-group), mRNA 42 2.1
53gb|AC126217.3| Rattus norvegicus 1 BAC CH230-9L4 (Children's Hos... 42 2.1
54gb|AC131341.3| Mus musculus BAC clone RP24-263O10 from chromosom... 42 2.1
55emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 42 2.1
56gb|AC119640.13| Rattus norvegicus 13 BAC CH230-444B7 (Children's... 42 2.1
57gb|AC114699.5| Rattus norvegicus 19 BAC CH230-235A3 (Children's ... 42 2.1
58gb|AE011954.1| Xanthomonas axonopodis pv. citri str. 306, secti... 42 2.1
59dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
60gb|AC154787.2| Mus musculus BAC clone RP24-468J5 from chromosome... 42 2.1
61dbj|AP004258.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
62gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare str... 42 2.1
63gb|AC105734.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.1
64dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome 42 2.1
65dbj|AP003878.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
66dbj|AP005099.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
67dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 42 2.1
68dbj|AP003540.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
69dbj|AK109394.3| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.1
70dbj|AP004619.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
71dbj|AK101719.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.1
72dbj|AK063414.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.1
73dbj|AP000679.7| Homo sapiens genomic DNA, chromosome 11 clone:CM... 42 2.1
74gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 42 2.1
75gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 42 2.1
76ref|NM_127493.2| Arabidopsis thaliana unknown protein AT2G19360 ... 40 8.2
77gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome 40 8.2
78gb|AC102219.11| Mus musculus chromosome 15, clone RP24-96K14, co... 40 8.2
79ref|NM_193404.1| Oryza sativa (japonica cultivar-group), predic... 40 8.2
80gb|DQ149987.1| Streptomyces neyagawaensis concanamycin A biosynt... 40 8.2
81gb|AY102564.1| Arabidopsis thaliana hypothetical protein (At2g44... 40 8.2
82gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 40 8.2
83gb|AE011720.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 8.2
84gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 8.2
85dbj|AP004365.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
86emb|BX537257.4| Mouse DNA sequence from clone RP23-89C2 on chrom... 40 8.2
87dbj|AK120690.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.2
88dbj|AK064194.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.2
89gb|AY111527.1| Zea mays CL34891_1 mRNA sequence 40 8.2
90gb|AC165888.18| Mus musculus chromosome 3, clone RP24-352B14, co... 40 8.2
91emb|AL807807.11| Mouse DNA sequence from clone RP23-284L15 on ch... 40 8.2

>ref|XM_470030.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1934

 Score =  198 bits (100), Expect = 1e-47
 Identities = 187/216 (86%)
 Strand = Plus / Plus

                                                                       
Query: 371 gcggtggccgcggcgaggtcgccggaggccaggatgcaccgccacctcaagcggctcaac 430
           |||| ||| ||||||||||| |||| ||  |||  |||||| ||||| ||||||||||||
Sbjct: 323 gcggcggcggcggcgaggtctccggcggggagggcgcaccggcacctgaagcggctcaac 382

                                                                       
Query: 431 aagccggccgtcaagagcatagagagccctgacggggacatcatagactgcgtgcacatc 490
           |||||||| || |||||||| |||||||| || |||||||||||||| ||||||||||||
Sbjct: 383 aagccggcggtgaagagcatcgagagcccagatggggacatcatagattgcgtgcacatc 442

                                                                       
Query: 491 tcgcaccagccggccttcgaccaccctttcctcaagaaccacaccatccagatgagaccg 550
           || |||||||| || ||||| || || ||||||||||||||||||||||||||||| |||
Sbjct: 443 tcacaccagccagctttcgatcatcccttcctcaagaaccacaccatccagatgaggccg 502

                                               
Query: 551 agctatcacccggagggcctgtacgacgagtccaag 586
           | ||| || || || |||||||||||||| ||||||
Sbjct: 503 aactaccatcccgatggcctgtacgacgaatccaag 538



to top

>ref|XM_478799.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1757

 Score =  133 bits (67), Expect = 7e-28
 Identities = 154/183 (84%)
 Strand = Plus / Plus

                                                                       
Query: 405 tgcaccgccacctcaagcggctcaacaagccggccgtcaagagcatagagagccctgacg 464
           ||||| ||||||||| ||||||||||||| || || ||   ||||| ||||| ||||| |
Sbjct: 240 tgcacagccacctcaggcggctcaacaaggcgcccctcgccagcatcgagagtcctgatg 299

                                                                       
Query: 465 gggacatcatagactgcgtgcacatctcgcaccagccggccttcgaccaccctttcctca 524
           | |||||||||||||| |||||||||||  ||||||| ||||| || |||||||||||||
Sbjct: 300 gagacatcatagactgtgtgcacatctccaaccagcctgcctttgatcaccctttcctca 359

                                                                       
Query: 525 agaaccacaccatccagatgagaccgagctatcacccggagggcctgtacgacgagtcca 584
           |||||||||| ||||||||||| ||    || ||||| || |||||||| || |||||||
Sbjct: 360 agaaccacactatccagatgaggcctgattaccacccagaaggcctgtatgatgagtcca 419

              
Query: 585 agg 587
           |||
Sbjct: 420 agg 422



to top

>ref|XM_507376.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1699_E05.18
           mRNA
          Length = 2418

 Score =  133 bits (67), Expect = 7e-28
 Identities = 154/183 (84%)
 Strand = Plus / Plus

                                                                       
Query: 405 tgcaccgccacctcaagcggctcaacaagccggccgtcaagagcatagagagccctgacg 464
           ||||| ||||||||| ||||||||||||| || || ||   ||||| ||||| ||||| |
Sbjct: 249 tgcacagccacctcaggcggctcaacaaggcgcccctcgccagcatcgagagtcctgatg 308

                                                                       
Query: 465 gggacatcatagactgcgtgcacatctcgcaccagccggccttcgaccaccctttcctca 524
           | |||||||||||||| |||||||||||  ||||||| ||||| || |||||||||||||
Sbjct: 309 gagacatcatagactgtgtgcacatctccaaccagcctgcctttgatcaccctttcctca 368

                                                                       
Query: 525 agaaccacaccatccagatgagaccgagctatcacccggagggcctgtacgacgagtcca 584
           |||||||||| ||||||||||| ||    || ||||| || |||||||| || |||||||
Sbjct: 369 agaaccacactatccagatgaggcctgattaccacccagaaggcctgtatgatgagtcca 428

              
Query: 585 agg 587
           |||
Sbjct: 429 agg 431



to top

>ref|XM_506420.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1699_E05.18
           mRNA
          Length = 1772

 Score =  133 bits (67), Expect = 7e-28
 Identities = 154/183 (84%)
 Strand = Plus / Plus

                                                                       
Query: 405 tgcaccgccacctcaagcggctcaacaagccggccgtcaagagcatagagagccctgacg 464
           ||||| ||||||||| ||||||||||||| || || ||   ||||| ||||| ||||| |
Sbjct: 382 tgcacagccacctcaggcggctcaacaaggcgcccctcgccagcatcgagagtcctgatg 441

                                                                       
Query: 465 gggacatcatagactgcgtgcacatctcgcaccagccggccttcgaccaccctttcctca 524
           | |||||||||||||| |||||||||||  ||||||| ||||| || |||||||||||||
Sbjct: 442 gagacatcatagactgtgtgcacatctccaaccagcctgcctttgatcaccctttcctca 501

                                                                       
Query: 525 agaaccacaccatccagatgagaccgagctatcacccggagggcctgtacgacgagtcca 584
           |||||||||| ||||||||||| ||    || ||||| || |||||||| || |||||||
Sbjct: 502 agaaccacactatccagatgaggcctgattaccacccagaaggcctgtatgatgagtcca 561

              
Query: 585 agg 587
           |||
Sbjct: 562 agg 564



to top

>dbj|AK121705.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075B20, full
           insert sequence
          Length = 1786

 Score =  133 bits (67), Expect = 7e-28
 Identities = 154/183 (84%)
 Strand = Plus / Plus

                                                                       
Query: 405 tgcaccgccacctcaagcggctcaacaagccggccgtcaagagcatagagagccctgacg 464
           ||||| ||||||||| ||||||||||||| || || ||   ||||| ||||| ||||| |
Sbjct: 248 tgcacagccacctcaggcggctcaacaaggcgcccctcgccagcatcgagagtcctgatg 307

                                                                       
Query: 465 gggacatcatagactgcgtgcacatctcgcaccagccggccttcgaccaccctttcctca 524
           | |||||||||||||| |||||||||||  ||||||| ||||| || |||||||||||||
Sbjct: 308 gagacatcatagactgtgtgcacatctccaaccagcctgcctttgatcaccctttcctca 367

                                                                       
Query: 525 agaaccacaccatccagatgagaccgagctatcacccggagggcctgtacgacgagtcca 584
           |||||||||| ||||||||||| ||    || ||||| || |||||||| || |||||||
Sbjct: 368 agaaccacactatccagatgaggcctgattaccacccagaaggcctgtatgatgagtcca 427

              
Query: 585 agg 587
           |||
Sbjct: 428 agg 430



to top

>dbj|AK119637.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-F04, full
           insert sequence
          Length = 1765

 Score =  133 bits (67), Expect = 7e-28
 Identities = 154/183 (84%)
 Strand = Plus / Plus

                                                                       
Query: 405 tgcaccgccacctcaagcggctcaacaagccggccgtcaagagcatagagagccctgacg 464
           ||||| ||||||||| ||||||||||||| || || ||   ||||| ||||| ||||| |
Sbjct: 247 tgcacagccacctcaggcggctcaacaaggcgcccctcgccagcatcgagagtcctgatg 306

                                                                       
Query: 465 gggacatcatagactgcgtgcacatctcgcaccagccggccttcgaccaccctttcctca 524
           | |||||||||||||| |||||||||||  ||||||| ||||| || |||||||||||||
Sbjct: 307 gagacatcatagactgtgtgcacatctccaaccagcctgcctttgatcaccctttcctca 366

                                                                       
Query: 525 agaaccacaccatccagatgagaccgagctatcacccggagggcctgtacgacgagtcca 584
           |||||||||| ||||||||||| ||    || ||||| || |||||||| || |||||||
Sbjct: 367 agaaccacactatccagatgaggcctgattaccacccagaaggcctgtatgatgagtcca 426

              
Query: 585 agg 587
           |||
Sbjct: 427 agg 429



to top

>dbj|AK102732.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106A21, full
           insert sequence
          Length = 2417

 Score =  133 bits (67), Expect = 7e-28
 Identities = 154/183 (84%)
 Strand = Plus / Plus

                                                                       
Query: 405 tgcaccgccacctcaagcggctcaacaagccggccgtcaagagcatagagagccctgacg 464
           ||||| ||||||||| ||||||||||||| || || ||   ||||| ||||| ||||| |
Sbjct: 248 tgcacagccacctcaggcggctcaacaaggcgcccctcgccagcatcgagagtcctgatg 307

                                                                       
Query: 465 gggacatcatagactgcgtgcacatctcgcaccagccggccttcgaccaccctttcctca 524
           | |||||||||||||| |||||||||||  ||||||| ||||| || |||||||||||||
Sbjct: 308 gagacatcatagactgtgtgcacatctccaaccagcctgcctttgatcaccctttcctca 367

                                                                       
Query: 525 agaaccacaccatccagatgagaccgagctatcacccggagggcctgtacgacgagtcca 584
           |||||||||| ||||||||||| ||    || ||||| || |||||||| || |||||||
Sbjct: 368 agaaccacactatccagatgaggcctgattaccacccagaaggcctgtatgatgagtcca 427

              
Query: 585 agg 587
           |||
Sbjct: 428 agg 430



to top

>dbj|AK065116.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001O09, full
           insert sequence
          Length = 1757

 Score =  133 bits (67), Expect = 7e-28
 Identities = 154/183 (84%)
 Strand = Plus / Plus

                                                                       
Query: 405 tgcaccgccacctcaagcggctcaacaagccggccgtcaagagcatagagagccctgacg 464
           ||||| ||||||||| ||||||||||||| || || ||   ||||| ||||| ||||| |
Sbjct: 240 tgcacagccacctcaggcggctcaacaaggcgcccctcgccagcatcgagagtcctgatg 299

                                                                       
Query: 465 gggacatcatagactgcgtgcacatctcgcaccagccggccttcgaccaccctttcctca 524
           | |||||||||||||| |||||||||||  ||||||| ||||| || |||||||||||||
Sbjct: 300 gagacatcatagactgtgtgcacatctccaaccagcctgcctttgatcaccctttcctca 359

                                                                       
Query: 525 agaaccacaccatccagatgagaccgagctatcacccggagggcctgtacgacgagtcca 584
           |||||||||| ||||||||||| ||    || ||||| || |||||||| || |||||||
Sbjct: 360 agaaccacactatccagatgaggcctgattaccacccagaaggcctgtatgatgagtcca 419

              
Query: 585 agg 587
           |||
Sbjct: 420 agg 422



to top

>dbj|AK061739.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-E10, full
           insert sequence
          Length = 1772

 Score =  133 bits (67), Expect = 7e-28
 Identities = 154/183 (84%)
 Strand = Plus / Plus

                                                                       
Query: 405 tgcaccgccacctcaagcggctcaacaagccggccgtcaagagcatagagagccctgacg 464
           ||||| ||||||||| ||||||||||||| || || ||   ||||| ||||| ||||| |
Sbjct: 382 tgcacagccacctcaggcggctcaacaaggcgcccctcgccagcatcgagagtcctgatg 441

                                                                       
Query: 465 gggacatcatagactgcgtgcacatctcgcaccagccggccttcgaccaccctttcctca 524
           | |||||||||||||| |||||||||||  ||||||| ||||| || |||||||||||||
Sbjct: 442 gagacatcatagactgtgtgcacatctccaaccagcctgcctttgatcaccctttcctca 501

                                                                       
Query: 525 agaaccacaccatccagatgagaccgagctatcacccggagggcctgtacgacgagtcca 584
           |||||||||| ||||||||||| ||    || ||||| || |||||||| || |||||||
Sbjct: 502 agaaccacactatccagatgaggcctgattaccacccagaaggcctgtatgatgagtcca 561

              
Query: 585 agg 587
           |||
Sbjct: 562 agg 564



to top

>gb|AY108738.1| Zea mays PCO103663 mRNA sequence
          Length = 923

 Score =  131 bits (66), Expect = 3e-27
 Identities = 114/130 (87%)
 Strand = Plus / Plus

                                                                       
Query: 405 tgcaccgccacctcaagcggctcaacaagccggccgtcaagagcatagagagccctgacg 464
           ||||||| ||||||||||| |||||||||||||||||||||||||| ||||| || || |
Sbjct: 381 tgcaccggcacctcaagcgcctcaacaagccggccgtcaagagcatcgagagtccagatg 440

                                                                       
Query: 465 gggacatcatagactgcgtgcacatctcgcaccagccggccttcgaccaccctttcctca 524
           | |||||||| ||||||||||| ||||| |||||||| || || || || ||| ||||||
Sbjct: 441 gagacatcatcgactgcgtgcatatctcccaccagccagcgtttgatcatcctctcctca 500

                     
Query: 525 agaaccacac 534
           ||||||||||
Sbjct: 501 agaaccacac 510



to top

>ref|XM_477068.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1812

 Score =  121 bits (61), Expect = 3e-24
 Identities = 136/161 (84%)
 Strand = Plus / Plus

                                                                       
Query: 386 aggtcgccggaggccaggatgcaccgccacctcaagcggctcaacaagccggccgtcaag 445
           |||||||||| ||| ||| ||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 350 aggtcgccggcggcgagggtgcaccggcacctcaagaggctcaacaagccggccgtcaag 409

                                                                       
Query: 446 agcatagagagccctgacggggacatcatagactgcgtgcacatctcgcaccagccggcc 505
           ||||| |||||||| || || |||||||| |||||||||||  |||| ||||| || || 
Sbjct: 410 agcatcgagagcccagatggagacatcatcgactgcgtgcatctctctcaccaaccagca 469

                                                    
Query: 506 ttcgaccaccctttcctcaagaaccacaccatccagatgag 546
           || || || ||  | ||||||||||| ||  ||||||||||
Sbjct: 470 tttgatcatcccctactcaagaaccatactctccagatgag 510



to top

>dbj|AK103449.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033129H24, full
           insert sequence
          Length = 1811

 Score =  121 bits (61), Expect = 3e-24
 Identities = 136/161 (84%)
 Strand = Plus / Plus

                                                                       
Query: 386 aggtcgccggaggccaggatgcaccgccacctcaagcggctcaacaagccggccgtcaag 445
           |||||||||| ||| ||| ||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 349 aggtcgccggcggcgagggtgcaccggcacctcaagaggctcaacaagccggccgtcaag 408

                                                                       
Query: 446 agcatagagagccctgacggggacatcatagactgcgtgcacatctcgcaccagccggcc 505
           ||||| |||||||| || || |||||||| |||||||||||  |||| ||||| || || 
Sbjct: 409 agcatcgagagcccagatggagacatcatcgactgcgtgcatctctctcaccaaccagca 468

                                                    
Query: 506 ttcgaccaccctttcctcaagaaccacaccatccagatgag 546
           || || || ||  | ||||||||||| ||  ||||||||||
Sbjct: 469 tttgatcatcccctactcaagaaccatactctccagatgag 509



to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  105 bits (53), Expect = 2e-19
 Identities = 80/89 (89%)
 Strand = Plus / Plus

                                                                            
Query: 453      agagccctgacggggacatcatagactgcgtgcacatctcgcaccagccggccttcgacc 512
                ||||||| || |||||||||||||| |||||||||||||| |||||||| || ||||| |
Sbjct: 33428466 agagcccagatggggacatcatagattgcgtgcacatctcacaccagccagctttcgatc 33428525

                                             
Query: 513      accctttcctcaagaaccacaccatccag 541
                | || ||||||||||||||||||||||||
Sbjct: 33428526 atcccttcctcaagaaccacaccatccag 33428554



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                            
Query: 371      gcggtggccgcggcgaggtcgccggaggccaggatgcaccgccacctcaagcggctcaac 430
                |||| ||| ||||||||||| |||| ||  |||  |||||| ||||| ||||||||||||
Sbjct: 33427871 gcggcggcggcggcgaggtctccggcggggagggcgcaccggcacctgaagcggctcaac 33427930

                                    
Query: 431      aagccggccgtcaagagcat 450
                |||||||| || ||||||||
Sbjct: 33427931 aagccggcggtgaagagcat 33427950



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 164     cccggaggcggcgcggcggta 184
               |||||||||||||||||||||
Sbjct: 2759097 cccggaggcggcgcggcggta 2759117



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                                
Query: 539      cagatgagaccgagctatcacccggagggcctgtacgacgagtccaag 586
                |||||||| |||| ||| || || || |||||||||||||| ||||||
Sbjct: 33428642 cagatgaggccgaactaccatcccgatggcctgtacgacgaatccaag 33428689



to top

>gb|AC135958.2| Oryza sativa chromosome 3 BAC OSJNBa0059E14 genomic sequence, complete
             sequence
          Length = 154555

 Score =  105 bits (53), Expect = 2e-19
 Identities = 80/89 (89%)
 Strand = Plus / Minus

                                                                         
Query: 453   agagccctgacggggacatcatagactgcgtgcacatctcgcaccagccggccttcgacc 512
             ||||||| || |||||||||||||| |||||||||||||| |||||||| || ||||| |
Sbjct: 69645 agagcccagatggggacatcatagattgcgtgcacatctcacaccagccagctttcgatc 69586

                                          
Query: 513   accctttcctcaagaaccacaccatccag 541
             | || ||||||||||||||||||||||||
Sbjct: 69585 atcccttcctcaagaaccacaccatccag 69557



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                         
Query: 371   gcggtggccgcggcgaggtcgccggaggccaggatgcaccgccacctcaagcggctcaac 430
             |||| ||| ||||||||||| |||| ||  |||  |||||| ||||| ||||||||||||
Sbjct: 70240 gcggcggcggcggcgaggtctccggcggggagggcgcaccggcacctgaagcggctcaac 70181

                                 
Query: 431   aagccggccgtcaagagcat 450
             |||||||| || ||||||||
Sbjct: 70180 aagccggcggtgaagagcat 70161



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                             
Query: 539   cagatgagaccgagctatcacccggagggcctgtacgacgagtccaag 586
             |||||||| |||| ||| || || || |||||||||||||| ||||||
Sbjct: 69469 cagatgaggccgaactaccatcccgatggcctgtacgacgaatccaag 69422



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  105 bits (53), Expect = 2e-19
 Identities = 80/89 (89%)
 Strand = Plus / Plus

                                                                            
Query: 453      agagccctgacggggacatcatagactgcgtgcacatctcgcaccagccggccttcgacc 512
                ||||||| || |||||||||||||| |||||||||||||| |||||||| || ||||| |
Sbjct: 33518976 agagcccagatggggacatcatagattgcgtgcacatctcacaccagccagctttcgatc 33519035

                                             
Query: 513      accctttcctcaagaaccacaccatccag 541
                | || ||||||||||||||||||||||||
Sbjct: 33519036 atcccttcctcaagaaccacaccatccag 33519064



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                            
Query: 371      gcggtggccgcggcgaggtcgccggaggccaggatgcaccgccacctcaagcggctcaac 430
                |||| ||| ||||||||||| |||| ||  |||  |||||| ||||| ||||||||||||
Sbjct: 33518381 gcggcggcggcggcgaggtctccggcggggagggcgcaccggcacctgaagcggctcaac 33518440

                                    
Query: 431      aagccggccgtcaagagcat 450
                |||||||| || ||||||||
Sbjct: 33518441 aagccggcggtgaagagcat 33518460



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 164     cccggaggcggcgcggcggta 184
               |||||||||||||||||||||
Sbjct: 2759207 cccggaggcggcgcggcggta 2759227



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                                
Query: 539      cagatgagaccgagctatcacccggagggcctgtacgacgagtccaag 586
                |||||||| |||| ||| || || || |||||||||||||| ||||||
Sbjct: 33519152 cagatgaggccgaactaccatcccgatggcctgtacgacgaatccaag 33519199



to top

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 79/89 (88%)
 Strand = Plus / Plus

                                                                            
Query: 453      agagccctgacggggacatcatagactgcgtgcacatctcgcaccagccggccttcgacc 512
                |||| ||||| || |||||||||||||| |||||||||||  ||||||| ||||| || |
Sbjct: 23125844 agagtcctgatggagacatcatagactgtgtgcacatctccaaccagcctgcctttgatc 23125903

                                             
Query: 513      accctttcctcaagaaccacaccatccag 541
                |||||||||||||||||||||| ||||||
Sbjct: 23125904 accctttcctcaagaaccacactatccag 23125932



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 60/65 (92%)
 Strand = Plus / Plus

                                                                           
Query: 386     aggtcgccggaggccaggatgcaccgccacctcaagcggctcaacaagccggccgtcaag 445
               |||||||||| ||| ||| ||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 5714512 aggtcgccggcggcgagggtgcaccggcacctcaagaggctcaacaagccggccgtcaag 5714571

                    
Query: 446     agcat 450
               |||||
Sbjct: 5714572 agcat 5714576



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                  
Query: 166      cggaggcggcgcggcggtaggtcgccggcggcga 199
                ||||||||||||||| | || |||||||||||||
Sbjct: 12785902 cggaggcggcgcggctggagatcgccggcggcga 12785869



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 370      ggcggtggccgcggcgaggtcgccg 394
                ||||||||| |||||||||||||||
Sbjct: 28832003 ggcggtggcggcggcgaggtcgccg 28832027



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 405      tgcaccgccacctcaagcggctcaacaag 433
                ||||| ||||||||| |||||||||||||
Sbjct: 23125026 tgcacagccacctcaggcggctcaacaag 23125054



to top

>dbj|AP003845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1699_E05
          Length = 170666

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 79/89 (88%)
 Strand = Plus / Plus

                                                                         
Query: 453   agagccctgacggggacatcatagactgcgtgcacatctcgcaccagccggccttcgacc 512
             |||| ||||| || |||||||||||||| |||||||||||  ||||||| ||||| || |
Sbjct: 70028 agagtcctgatggagacatcatagactgtgtgcacatctccaaccagcctgcctttgatc 70087

                                          
Query: 513   accctttcctcaagaaccacaccatccag 541
             |||||||||||||||||||||| ||||||
Sbjct: 70088 accctttcctcaagaaccacactatccag 70116



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 405   tgcaccgccacctcaagcggctcaacaag 433
             ||||| ||||||||| |||||||||||||
Sbjct: 69210 tgcacagccacctcaggcggctcaacaag 69238



to top

>gb|AY112065.1| Zea mays CL4497_1 mRNA sequence
          Length = 930

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 74/83 (89%)
 Strand = Plus / Plus

                                                                       
Query: 462 acggggacatcatagactgcgtgcacatctcgcaccagccggccttcgaccaccctttcc 521
           |||| |||||||||||||||||||| |||||  ||||||| ||||| || || |||||||
Sbjct: 252 acggagacatcatagactgcgtgcatatctccaaccagcccgccttggatcatcctttcc 311

                                  
Query: 522 tcaagaaccacaccatccagatg 544
           |||||||||||||| ||||||||
Sbjct: 312 tcaagaaccacaccgtccagatg 334



to top

>dbj|AP003943.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1119_B04
          Length = 151721

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 60/65 (92%)
 Strand = Plus / Plus

                                                                         
Query: 386   aggtcgccggaggccaggatgcaccgccacctcaagcggctcaacaagccggccgtcaag 445
             |||||||||| ||| ||| ||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 21540 aggtcgccggcggcgagggtgcaccggcacctcaagaggctcaacaagccggccgtcaag 21599

                  
Query: 446   agcat 450
             |||||
Sbjct: 21600 agcat 21604



to top

>ref|NM_189476.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1290

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 74/89 (83%)
 Strand = Plus / Plus

                                                                       
Query: 453 agagccctgacggggacatcatagactgcgtgcacatctcgcaccagccggccttcgacc 512
           ||||||| || || || ||||||||||| ||||| |||||  | ||||| || ||||| |
Sbjct: 275 agagcccagatggagatatcatagactgtgtgcatatctccaaacagcctgcgttcgatc 334

                                        
Query: 513 accctttcctcaagaaccacaccatccag 541
           | ||| |||||||||||||||| ||||||
Sbjct: 335 atcctctcctcaagaaccacacaatccag 363



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 74/89 (83%)
 Strand = Plus / Plus

                                                                            
Query: 453      agagccctgacggggacatcatagactgcgtgcacatctcgcaccagccggccttcgacc 512
                ||||||| || || || ||||||||||| ||||| |||||  | ||||| || ||||| |
Sbjct: 42952822 agagcccagatggagatatcatagactgtgtgcatatctccaaacagcctgcgttcgatc 42952881

                                             
Query: 513      accctttcctcaagaaccacaccatccag 541
                | ||| |||||||||||||||| ||||||
Sbjct: 42952882 atcctctcctcaagaaccacacaatccag 42952910



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 57/69 (82%)
 Strand = Plus / Plus

                                                                            
Query: 473      atagactgcgtgcacatctcgcaccagccggccttcgaccaccctttcctcaagaaccac 532
                |||||||| |||||||||||    ||||| || ||||| || ||| ||||||||||||| 
Sbjct: 20647999 atagactgtgtgcacatctccagacagcctgcattcgatcatcctctcctcaagaaccat 20648058

                         
Query: 533      accatccag 541
                || ||||||
Sbjct: 20648059 acaatccag 20648067



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 184      aggtcgccggcggcgagggg 203
                ||||||||||||||||||||
Sbjct: 42638495 aggtcgccggcggcgagggg 42638476



to top

>dbj|AP003298.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0698H10
          Length = 153449

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 74/89 (83%)
 Strand = Plus / Plus

                                                                         
Query: 453   agagccctgacggggacatcatagactgcgtgcacatctcgcaccagccggccttcgacc 512
             ||||||| || || || ||||||||||| ||||| |||||  | ||||| || ||||| |
Sbjct: 53701 agagcccagatggagatatcatagactgtgtgcatatctccaaacagcctgcgttcgatc 53760

                                          
Query: 513   accctttcctcaagaaccacaccatccag 541
             | ||| |||||||||||||||| ||||||
Sbjct: 53761 atcctctcctcaagaaccacacaatccag 53789



to top

>dbj|AP003277.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0518C01
          Length = 173555

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 74/89 (83%)
 Strand = Plus / Plus

                                                                          
Query: 453    agagccctgacggggacatcatagactgcgtgcacatctcgcaccagccggccttcgacc 512
              ||||||| || || || ||||||||||| ||||| |||||  | ||||| || ||||| |
Sbjct: 146556 agagcccagatggagatatcatagactgtgtgcatatctccaaacagcctgcgttcgatc 146615

                                           
Query: 513    accctttcctcaagaaccacaccatccag 541
              | ||| |||||||||||||||| ||||||
Sbjct: 146616 atcctctcctcaagaaccacacaatccag 146644



to top

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                            
Query: 406     gcaccgccacctcaagcggctcaacaagccggccgtcaagagcat 450
               |||||| ||||| ||| |||||||||||||||| || ||||||||
Sbjct: 4299294 gcaccggcacctgaaggggctcaacaagccggcggtgaagagcat 4299338



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 72/89 (80%)
 Strand = Plus / Minus

                                                                           
Query: 453     agagccctgacggggacatcatagactgcgtgcacatctcgcaccagccggccttcgacc 512
               ||||||| || || || ||||||||||| |||||||||||    ||||| || ||||| |
Sbjct: 9577480 agagcccagatggagatatcatagactgtgtgcacatctccagacagcctgcattcgatc 9577421

                                            
Query: 513     accctttcctcaagaaccacaccatccag 541
               | ||| |||||||| |||| || ||||||
Sbjct: 9577420 atcctctcctcaaggaccatacaatccag 9577392



to top

>dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0554A06
          Length = 165311

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                           
Query: 406    gcaccgccacctcaagcggctcaacaagccggccgtcaagagcat 450
              |||||| ||||| ||| |||||||||||||||| || ||||||||
Sbjct: 144515 gcaccggcacctgaaggggctcaacaagccggcggtgaagagcat 144559



to top

>dbj|AK107760.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-133-A08, full
           insert sequence
          Length = 730

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                        
Query: 406 gcaccgccacctcaagcggctcaacaagccggccgtcaagagcat 450
           |||||| ||||| ||| |||||||||||||||| || ||||||||
Sbjct: 224 gcaccggcacctgaaggggctcaacaagccggcggtgaagagcat 268



to top

>ref|NM_129986.2| Arabidopsis thaliana unknown protein AT2G44220 mRNA, complete cds
          Length = 1344

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 527 aaccacaccatccagatgagaccgag 552
           ||||| ||||||||||||||||||||
Sbjct: 215 aaccataccatccagatgagaccgag 240



to top

>ref|NM_193406.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1020

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                       
Query: 473 atagactgcgtgcacatctcgcaccagccggccttcgaccaccctttcctcaagaaccac 532
           |||||||| |||||||||||    ||||| || ||||| || ||| ||||||||||||| 
Sbjct: 196 atagactgtgtgcacatctccagacagcctgcattcgatcatcctctcctcaagaaccat 255

                     
Query: 533 accatccaga 542
           || |||||||
Sbjct: 256 acaatccaga 265



to top

>gb|AC044860.11| Homo sapiens chromosome 15, clone RP11-561C5, complete sequence
          Length = 233775

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 123    ctcccccctccccgcattgttt 144
              ||||||||||||||||||||||
Sbjct: 107937 ctcccccctccccgcattgttt 107958



to top

>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29
          Length = 339650

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 372   cggtggccgcggcgaggtcgcc 393
             ||||||||||||||||||||||
Sbjct: 47208 cggtggccgcggcgaggtcgcc 47187



to top

>gb|AC135995.7| Homo sapiens chromosome 15, clone RP13-608F4, complete sequence
          Length = 157246

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 123   ctcccccctccccgcattgttt 144
             ||||||||||||||||||||||
Sbjct: 32517 ctcccccctccccgcattgttt 32538



to top

>gb|AC135735.2| Homo sapiens chromosome 15, clone RP11-1270F20, complete sequence
          Length = 175310

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 123   ctcccccctccccgcattgttt 144
             ||||||||||||||||||||||
Sbjct: 97651 ctcccccctccccgcattgttt 97630



to top

>gb|AC126605.4| Homo sapiens chromosome 15, clone RP11-606M5, complete sequence
          Length = 169125

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 123    ctcccccctccccgcattgttt 144
              ||||||||||||||||||||||
Sbjct: 104133 ctcccccctccccgcattgttt 104154



to top

>gb|AC110291.6| Homo sapiens chromosome 15, clone RP11-379H8, complete sequence
          Length = 186812

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 123   ctcccccctccccgcattgttt 144
             ||||||||||||||||||||||
Sbjct: 58080 ctcccccctccccgcattgttt 58059



to top

>gb|AC108000.5| Homo sapiens chromosome 15, clone CTD-2116G1, complete sequence
          Length = 167587

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 123    ctcccccctccccgcattgttt 144
              ||||||||||||||||||||||
Sbjct: 130623 ctcccccctccccgcattgttt 130644



to top

>gb|AC127482.10| Homo sapiens chromosome 15, clone CTD-2547M4, complete sequence
          Length = 193680

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 123    ctcccccctccccgcattgttt 144
              ||||||||||||||||||||||
Sbjct: 189090 ctcccccctccccgcattgttt 189069



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 123   ctcccccctccccgcattgttt 144
             ||||||||||||||||||||||
Sbjct: 98844 ctcccccctccccgcattgttt 98823



to top

>gb|AC005630.1| Homo sapiens PAC clone RP5-1129D5 from 15, complete sequence
          Length = 137699

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 123    ctcccccctccccgcattgttt 144
              ||||||||||||||||||||||
Sbjct: 103574 ctcccccctccccgcattgttt 103553



to top

>gb|AC010725.5| Homo sapiens BAC clone RP11-156N7 from 15, complete sequence
          Length = 155351

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 123   ctcccccctccccgcattgttt 144
             ||||||||||||||||||||||
Sbjct: 55099 ctcccccctccccgcattgttt 55120



to top

>gb|AC011295.3| Homo sapiens BAC clone RP11-96J23 from 15, complete sequence
          Length = 148698

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 123    ctcccccctccccgcattgttt 144
              ||||||||||||||||||||||
Sbjct: 144114 ctcccccctccccgcattgttt 144093



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 123   ctcccccctccccgcattgttt 144
             ||||||||||||||||||||||
Sbjct: 65100 ctcccccctccccgcattgttt 65079



to top

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 375     tggccgcggcgaggtcgccgga 396
               ||||||||||||||||||||||
Sbjct: 5037428 tggccgcggcgaggtcgccgga 5037407



to top

>gb|AC010724.6|AC010724 Homo sapiens BAC clone RP11-152F13 from 15, complete sequence
          Length = 157200

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 123   ctcccccctccccgcattgttt 144
             ||||||||||||||||||||||
Sbjct: 45446 ctcccccctccccgcattgttt 45467



to top

>gb|AC012064.3|AC012064 Homo sapiens BAC clone RP11-123N1 from 15, complete sequence
          Length = 170520

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 123    ctcccccctccccgcattgttt 144
              ||||||||||||||||||||||
Sbjct: 165936 ctcccccctccccgcattgttt 165915



to top

>gb|AC126339.6| Homo sapiens chromosome 15, clone RP13-98N21, complete sequence
          Length = 95499

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 123   ctcccccctccccgcattgttt 144
             ||||||||||||||||||||||
Sbjct: 66375 ctcccccctccccgcattgttt 66396



to top

>gb|AC139425.3| Homo sapiens chromosome 15, clone RP13-996F3, complete sequence
          Length = 132528

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 123   ctcccccctccccgcattgttt 144
             ||||||||||||||||||||||
Sbjct: 86529 ctcccccctccccgcattgttt 86550



to top

>gb|AC136698.6| Homo sapiens chromosome 15, clone RP13-262C2, complete sequence
          Length = 169605

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 123    ctcccccctccccgcattgttt 144
              ||||||||||||||||||||||
Sbjct: 128447 ctcccccctccccgcattgttt 128426



to top

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 370     ggcggtggccgcggcgaggtcgccgg 395
               |||| |||||||||||||||||||||
Sbjct: 4164041 ggcgatggccgcggcgaggtcgccgg 4164066



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 370     ggcggtggccgcggcgaggt 389
               ||||||||||||||||||||
Sbjct: 3276923 ggcggtggccgcggcgaggt 3276942



to top

>dbj|AP005325.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0710F09
          Length = 198867

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 166   cggaggcggcgcggcggtaggtcgccggcggcga 199
             ||||||||||||||| | || |||||||||||||
Sbjct: 44026 cggaggcggcgcggctggagatcgccggcggcga 43993



to top

>gb|AY954838.1| Arabidopsis thaliana hypothetical protein (At2g44220) mRNA,
           complete cds
          Length = 1182

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 527 aaccacaccatccagatgagaccgag 552
           ||||| ||||||||||||||||||||
Sbjct: 196 aaccataccatccagatgagaccgag 221



to top

>ref|NM_129989.3| Arabidopsis thaliana unknown protein AT2G44250 mRNA, complete cds
          Length = 1352

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 515 cctttcctcaagaaccacaccatccagatgagaccga 551
           ||||| ||||| ||||||||||| |||||||| ||||
Sbjct: 223 cctttactcaaaaaccacaccattcagatgaggccga 259



to top

>ref|XM_480349.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 4178

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 117 gcgtgcctcccccctccccgc 137
           |||||||||||||||||||||
Sbjct: 102 gcgtgcctcccccctccccgc 122



to top

>ref|XM_470240.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 873

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 164 cccggaggcggcgcggcggta 184
           |||||||||||||||||||||
Sbjct: 312 cccggaggcggcgcggcggta 292



to top

>ref|XM_479552.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1581

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 370 ggcggtggccgcggcgaggtcgccg 394
           ||||||||| |||||||||||||||
Sbjct: 901 ggcggtggcggcggcgaggtcgccg 925



to top

>gb|AC126217.3| Rattus norvegicus 1 BAC CH230-9L4 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 243051

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 232    gttcttgaagttgtagccggagcaa 256
              |||||||||||| ||||||||||||
Sbjct: 154986 gttcttgaagttctagccggagcaa 155010



to top

>gb|AC131341.3| Mus musculus BAC clone RP24-263O10 from chromosome 17, complete sequence
          Length = 152220

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 517    tttcctcaagaaccacaccat 537
              |||||||||||||||||||||
Sbjct: 144501 tttcctcaagaaccacaccat 144521



to top

>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 4       caacgcggccgggttgcgcac 24
               |||||||||||||||||||||
Sbjct: 3689120 caacgcggccgggttgcgcac 3689140



to top

>gb|AC119640.13| Rattus norvegicus 13 BAC CH230-444B7 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 120319

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 232   gttcttgaagttgtagccggagcaa 256
             |||||||||||||||||| ||||||
Sbjct: 64219 gttcttgaagttgtagccagagcaa 64243



to top

>gb|AC114699.5| Rattus norvegicus 19 BAC CH230-235A3 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 224930

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 232   gttcttgaagttgtagccggagcaa 256
             |||||||||||| ||||||||||||
Sbjct: 51623 gttcttgaagttctagccggagcaa 51647



to top

>gb|AE011954.1| Xanthomonas axonopodis pv. citri str. 306,  section 332 of 469 of the
            complete genome
          Length = 12615

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 4    caacgcggccgggttgcgcac 24
            |||||||||||||||||||||
Sbjct: 1393 caacgcggccgggttgcgcac 1413



to top

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 117     gcgtgcctcccccctccccgc 137
               |||||||||||||||||||||
Sbjct: 4532273 gcgtgcctcccccctccccgc 4532253



to top

>gb|AC154787.2| Mus musculus BAC clone RP24-468J5 from chromosome 17, complete sequence
          Length = 217844

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 517    tttcctcaagaaccacaccat 537
              |||||||||||||||||||||
Sbjct: 110343 tttcctcaagaaccacaccat 110323



to top

>dbj|AP004258.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0024F24
          Length = 172642

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 57/69 (82%)
 Strand = Plus / Plus

                                                                          
Query: 473    atagactgcgtgcacatctcgcaccagccggccttcgaccaccctttcctcaagaaccac 532
              |||||||| |||||||||||    ||||| || ||||| || ||| ||||||||||||| 
Sbjct: 109975 atagactgtgtgcacatctccagacagcctgcattcgatcatcctctcctcaagaaccat 110034

                       
Query: 533    accatccag 541
              || ||||||
Sbjct: 110035 acaatccag 110043



to top

>gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0038D20, from chromosome 3, complete sequence
          Length = 165395

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 164   cccggaggcggcgcggcggta 184
             |||||||||||||||||||||
Sbjct: 31053 cccggaggcggcgcggcggta 31073



to top

>gb|AC105734.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0050N02,
              complete sequence
          Length = 133373

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 164    cccggaggcggcgcggcggta 184
              |||||||||||||||||||||
Sbjct: 104016 cccggaggcggcgcggcggta 104036



to top

>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome
          Length = 1669695

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 436     ggccgtcaagagcatagagag 456
               |||||||||||||||||||||
Sbjct: 1315323 ggccgtcaagagcatagagag 1315303



to top

>dbj|AP003878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1120_C08
          Length = 150300

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 117   gcgtgcctcccccctccccgc 137
             |||||||||||||||||||||
Sbjct: 56121 gcgtgcctcccccctccccgc 56101



to top

>dbj|AP005099.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0008J01
          Length = 159900

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 370   ggcggtggccgcggcgaggtcgccg 394
             ||||||||| |||||||||||||||
Sbjct: 89689 ggcggtggcggcggcgaggtcgccg 89713



to top

>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 162    tccccggaggcggcgcggcgg 182
              |||||||||||||||||||||
Sbjct: 901175 tccccggaggcggcgcggcgg 901195



to top

>dbj|AP003540.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0450D12
          Length = 176431

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 72/89 (80%)
 Strand = Plus / Minus

                                                                         
Query: 453   agagccctgacggggacatcatagactgcgtgcacatctcgcaccagccggccttcgacc 512
             ||||||| || || || ||||||||||| |||||||||||    ||||| || ||||| |
Sbjct: 36097 agagcccagatggagatatcatagactgtgtgcacatctccagacagcctgcattcgatc 36038

                                          
Query: 513   accctttcctcaagaaccacaccatccag 541
             | ||| |||||||| |||| || ||||||
Sbjct: 36037 atcctctcctcaaggaccatacaatccag 36009



to top

>dbj|AK109394.3| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-E06, full
           insert sequence
          Length = 1144

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 164 cccggaggcggcgcggcggta 184
           |||||||||||||||||||||
Sbjct: 350 cccggaggcggcgcggcggta 330



to top

>dbj|AP004619.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0583B06
          Length = 134442

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 117   gcgtgcctcccccctccccgc 137
             |||||||||||||||||||||
Sbjct: 98163 gcgtgcctcccccctccccgc 98143



to top

>dbj|AK101719.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033060P10, full
           insert sequence
          Length = 4177

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 117 gcgtgcctcccccctccccgc 137
           |||||||||||||||||||||
Sbjct: 102 gcgtgcctcccccctccccgc 122



to top

>dbj|AK063414.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-B07, full
           insert sequence
          Length = 3278

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 117 gcgtgcctcccccctccccgc 137
           |||||||||||||||||||||
Sbjct: 145 gcgtgcctcccccctccccgc 165



to top

>dbj|AP000679.7| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-21E14, complete
             sequence
          Length = 132641

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 58    agcgccagcgtcccgagtccc 78
             |||||||||||||||||||||
Sbjct: 97826 agcgccagcgtcccgagtccc 97846



to top

>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 336     gcctgctggcggcggtgatatgcct 360
               ||||||||||||||||||| |||||
Sbjct: 3907313 gcctgctggcggcggtgatctgcct 3907289



to top

>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 231    cgttcttgaagttgtagccgg 251
              |||||||||||||||||||||
Sbjct: 115121 cgttcttgaagttgtagccgg 115101



to top

>ref|NM_127493.2| Arabidopsis thaliana unknown protein AT2G19360 mRNA, complete cds
          Length = 1281

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 522 tcaagaaccacaccatccagatgagacc 549
           |||| ||||||||||| |||||||||||
Sbjct: 221 tcaaaaaccacaccattcagatgagacc 248



to top

>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 254    caaggtgctgggcgacagaa 273
              ||||||||||||||||||||
Sbjct: 774973 caaggtgctgggcgacagaa 774992



to top

>gb|AC102219.11| Mus musculus chromosome 15, clone RP24-96K14, complete sequence
          Length = 194425

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 126    ccccctccccgcattgtttc 145
              ||||||||||||||||||||
Sbjct: 172435 ccccctccccgcattgtttc 172454



to top

>ref|NM_193404.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1137

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 65/80 (81%)
 Strand = Plus / Plus

                                                                       
Query: 470 atcatagactgcgtgcacatctcgcaccagccggccttcgaccaccctttcctcaagaac 529
           |||||||| || |||||||||||  | || || || |||||||| ||| | |||||| ||
Sbjct: 169 atcatagattgtgtgcacatctccaatcaacctgcattcgaccatcctcttctcaaggac 228

                               
Query: 530 cacaccatccagatgagacc 549
           || || ||||||||| ||||
Sbjct: 229 catacaatccagatgcgacc 248



to top

>gb|DQ149987.1| Streptomyces neyagawaensis concanamycin A biosynthetic gene cluster,
             complete sequence
          Length = 99892

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 366   gcggggcggtggccgcggcg 385
             ||||||||||||||||||||
Sbjct: 52967 gcggggcggtggccgcggcg 52948



to top

>gb|AY102564.1| Arabidopsis thaliana hypothetical protein (At2g44220/F4I1.3) mRNA,
           complete cds
          Length = 1358

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 24/26 (92%)
 Strand = Plus / Plus

                                     
Query: 527 aaccacaccatccagatgagaccgag 552
           ||||| |||||||||||||||| |||
Sbjct: 215 aaccataccatccagatgagacmgag 240



to top

>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 324    gcgtcgtcgcgtgcctgctg 343
              ||||||||||||||||||||
Sbjct: 685192 gcgtcgtcgcgtgcctgctg 685173



to top

>gb|AE011720.1| Xanthomonas axonopodis pv. citri str. 306,  section 98 of 469 of the
            complete genome
          Length = 10983

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 165  ccggaggcggcgcggcggta 184
            ||||||||||||||||||||
Sbjct: 9097 ccggaggcggcgcggcggta 9116



to top

>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 85      cagacggcgagccgccccag 104
               ||||||||||||||||||||
Sbjct: 1008674 cagacggcgagccgccccag 1008655



to top

>dbj|AP004365.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0458E05
          Length = 193577

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 184    aggtcgccggcggcgagggg 203
              ||||||||||||||||||||
Sbjct: 159378 aggtcgccggcggcgagggg 159359



to top

>emb|BX537257.4| Mouse DNA sequence from clone RP23-89C2 on chromosome 2, complete
             sequence
          Length = 79633

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 243   tgtagccggagcaaggtgctgggc 266
             |||||| |||||||||||||||||
Sbjct: 59754 tgtagctggagcaaggtgctgggc 59731



to top

>dbj|AK120690.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169H18, full
           insert sequence
          Length = 4054

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 184 aggtcgccggcggcgagggg 203
           ||||||||||||||||||||
Sbjct: 79  aggtcgccggcggcgagggg 60



to top

>dbj|AK064194.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-D02, full
           insert sequence
          Length = 1552

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 65/80 (81%)
 Strand = Plus / Plus

                                                                       
Query: 470 atcatagactgcgtgcacatctcgcaccagccggccttcgaccaccctttcctcaagaac 529
           |||||||| || |||||||||||  | || || || |||||||| ||| | |||||| ||
Sbjct: 217 atcatagattgtgtgcacatctccaatcaacctgcattcgaccatcctcttctcaaggac 276

                               
Query: 530 cacaccatccagatgagacc 549
           || || ||||||||| ||||
Sbjct: 277 catacaatccagatgcgacc 296



to top

>gb|AY111527.1| Zea mays CL34891_1 mRNA sequence
          Length = 586

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 519 tcctcaagaaccacaccatccagatgag 546
           |||||||||||||||| || ||||||||
Sbjct: 336 tcctcaagaaccacacaatacagatgag 363



to top

>gb|AC165888.18| Mus musculus chromosome 3, clone RP24-352B14, complete sequence
          Length = 181505

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 119    gtgcctcccccctccccgca 138
              ||||||||||||||||||||
Sbjct: 113565 gtgcctcccccctccccgca 113546



to top

>emb|AL807807.11| Mouse DNA sequence from clone RP23-284L15 on chromosome 4, complete
              sequence
          Length = 171570

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 119    gtgcctcccccctccccgca 138
              ||||||||||||||||||||
Sbjct: 166901 gtgcctcccccctccccgca 166920


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,228,599
Number of Sequences: 3902068
Number of extensions: 4228599
Number of successful extensions: 119096
Number of sequences better than 10.0: 91
Number of HSP's better than 10.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 116602
Number of HSP's gapped (non-prelim): 2490
length of query: 600
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 577
effective length of database: 17,143,297,704
effective search space: 9891682775208
effective search space used: 9891682775208
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top