| Clone Name | basd26l05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_470030.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1934 Score = 198 bits (100), Expect = 1e-47 Identities = 187/216 (86%) Strand = Plus / Plus Query: 371 gcggtggccgcggcgaggtcgccggaggccaggatgcaccgccacctcaagcggctcaac 430 |||| ||| ||||||||||| |||| || ||| |||||| ||||| |||||||||||| Sbjct: 323 gcggcggcggcggcgaggtctccggcggggagggcgcaccggcacctgaagcggctcaac 382 Query: 431 aagccggccgtcaagagcatagagagccctgacggggacatcatagactgcgtgcacatc 490 |||||||| || |||||||| |||||||| || |||||||||||||| |||||||||||| Sbjct: 383 aagccggcggtgaagagcatcgagagcccagatggggacatcatagattgcgtgcacatc 442 Query: 491 tcgcaccagccggccttcgaccaccctttcctcaagaaccacaccatccagatgagaccg 550 || |||||||| || ||||| || || ||||||||||||||||||||||||||||| ||| Sbjct: 443 tcacaccagccagctttcgatcatcccttcctcaagaaccacaccatccagatgaggccg 502 Query: 551 agctatcacccggagggcctgtacgacgagtccaag 586 | ||| || || || |||||||||||||| |||||| Sbjct: 503 aactaccatcccgatggcctgtacgacgaatccaag 538
>ref|XM_478799.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1757 Score = 133 bits (67), Expect = 7e-28 Identities = 154/183 (84%) Strand = Plus / Plus Query: 405 tgcaccgccacctcaagcggctcaacaagccggccgtcaagagcatagagagccctgacg 464 ||||| ||||||||| ||||||||||||| || || || ||||| ||||| ||||| | Sbjct: 240 tgcacagccacctcaggcggctcaacaaggcgcccctcgccagcatcgagagtcctgatg 299 Query: 465 gggacatcatagactgcgtgcacatctcgcaccagccggccttcgaccaccctttcctca 524 | |||||||||||||| ||||||||||| ||||||| ||||| || ||||||||||||| Sbjct: 300 gagacatcatagactgtgtgcacatctccaaccagcctgcctttgatcaccctttcctca 359 Query: 525 agaaccacaccatccagatgagaccgagctatcacccggagggcctgtacgacgagtcca 584 |||||||||| ||||||||||| || || ||||| || |||||||| || ||||||| Sbjct: 360 agaaccacactatccagatgaggcctgattaccacccagaaggcctgtatgatgagtcca 419 Query: 585 agg 587 ||| Sbjct: 420 agg 422
>ref|XM_507376.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1699_E05.18 mRNA Length = 2418 Score = 133 bits (67), Expect = 7e-28 Identities = 154/183 (84%) Strand = Plus / Plus Query: 405 tgcaccgccacctcaagcggctcaacaagccggccgtcaagagcatagagagccctgacg 464 ||||| ||||||||| ||||||||||||| || || || ||||| ||||| ||||| | Sbjct: 249 tgcacagccacctcaggcggctcaacaaggcgcccctcgccagcatcgagagtcctgatg 308 Query: 465 gggacatcatagactgcgtgcacatctcgcaccagccggccttcgaccaccctttcctca 524 | |||||||||||||| ||||||||||| ||||||| ||||| || ||||||||||||| Sbjct: 309 gagacatcatagactgtgtgcacatctccaaccagcctgcctttgatcaccctttcctca 368 Query: 525 agaaccacaccatccagatgagaccgagctatcacccggagggcctgtacgacgagtcca 584 |||||||||| ||||||||||| || || ||||| || |||||||| || ||||||| Sbjct: 369 agaaccacactatccagatgaggcctgattaccacccagaaggcctgtatgatgagtcca 428 Query: 585 agg 587 ||| Sbjct: 429 agg 431
>ref|XM_506420.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1699_E05.18 mRNA Length = 1772 Score = 133 bits (67), Expect = 7e-28 Identities = 154/183 (84%) Strand = Plus / Plus Query: 405 tgcaccgccacctcaagcggctcaacaagccggccgtcaagagcatagagagccctgacg 464 ||||| ||||||||| ||||||||||||| || || || ||||| ||||| ||||| | Sbjct: 382 tgcacagccacctcaggcggctcaacaaggcgcccctcgccagcatcgagagtcctgatg 441 Query: 465 gggacatcatagactgcgtgcacatctcgcaccagccggccttcgaccaccctttcctca 524 | |||||||||||||| ||||||||||| ||||||| ||||| || ||||||||||||| Sbjct: 442 gagacatcatagactgtgtgcacatctccaaccagcctgcctttgatcaccctttcctca 501 Query: 525 agaaccacaccatccagatgagaccgagctatcacccggagggcctgtacgacgagtcca 584 |||||||||| ||||||||||| || || ||||| || |||||||| || ||||||| Sbjct: 502 agaaccacactatccagatgaggcctgattaccacccagaaggcctgtatgatgagtcca 561 Query: 585 agg 587 ||| Sbjct: 562 agg 564
>dbj|AK121705.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075B20, full insert sequence Length = 1786 Score = 133 bits (67), Expect = 7e-28 Identities = 154/183 (84%) Strand = Plus / Plus Query: 405 tgcaccgccacctcaagcggctcaacaagccggccgtcaagagcatagagagccctgacg 464 ||||| ||||||||| ||||||||||||| || || || ||||| ||||| ||||| | Sbjct: 248 tgcacagccacctcaggcggctcaacaaggcgcccctcgccagcatcgagagtcctgatg 307 Query: 465 gggacatcatagactgcgtgcacatctcgcaccagccggccttcgaccaccctttcctca 524 | |||||||||||||| ||||||||||| ||||||| ||||| || ||||||||||||| Sbjct: 308 gagacatcatagactgtgtgcacatctccaaccagcctgcctttgatcaccctttcctca 367 Query: 525 agaaccacaccatccagatgagaccgagctatcacccggagggcctgtacgacgagtcca 584 |||||||||| ||||||||||| || || ||||| || |||||||| || ||||||| Sbjct: 368 agaaccacactatccagatgaggcctgattaccacccagaaggcctgtatgatgagtcca 427 Query: 585 agg 587 ||| Sbjct: 428 agg 430
>dbj|AK119637.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-F04, full insert sequence Length = 1765 Score = 133 bits (67), Expect = 7e-28 Identities = 154/183 (84%) Strand = Plus / Plus Query: 405 tgcaccgccacctcaagcggctcaacaagccggccgtcaagagcatagagagccctgacg 464 ||||| ||||||||| ||||||||||||| || || || ||||| ||||| ||||| | Sbjct: 247 tgcacagccacctcaggcggctcaacaaggcgcccctcgccagcatcgagagtcctgatg 306 Query: 465 gggacatcatagactgcgtgcacatctcgcaccagccggccttcgaccaccctttcctca 524 | |||||||||||||| ||||||||||| ||||||| ||||| || ||||||||||||| Sbjct: 307 gagacatcatagactgtgtgcacatctccaaccagcctgcctttgatcaccctttcctca 366 Query: 525 agaaccacaccatccagatgagaccgagctatcacccggagggcctgtacgacgagtcca 584 |||||||||| ||||||||||| || || ||||| || |||||||| || ||||||| Sbjct: 367 agaaccacactatccagatgaggcctgattaccacccagaaggcctgtatgatgagtcca 426 Query: 585 agg 587 ||| Sbjct: 427 agg 429
>dbj|AK102732.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106A21, full insert sequence Length = 2417 Score = 133 bits (67), Expect = 7e-28 Identities = 154/183 (84%) Strand = Plus / Plus Query: 405 tgcaccgccacctcaagcggctcaacaagccggccgtcaagagcatagagagccctgacg 464 ||||| ||||||||| ||||||||||||| || || || ||||| ||||| ||||| | Sbjct: 248 tgcacagccacctcaggcggctcaacaaggcgcccctcgccagcatcgagagtcctgatg 307 Query: 465 gggacatcatagactgcgtgcacatctcgcaccagccggccttcgaccaccctttcctca 524 | |||||||||||||| ||||||||||| ||||||| ||||| || ||||||||||||| Sbjct: 308 gagacatcatagactgtgtgcacatctccaaccagcctgcctttgatcaccctttcctca 367 Query: 525 agaaccacaccatccagatgagaccgagctatcacccggagggcctgtacgacgagtcca 584 |||||||||| ||||||||||| || || ||||| || |||||||| || ||||||| Sbjct: 368 agaaccacactatccagatgaggcctgattaccacccagaaggcctgtatgatgagtcca 427 Query: 585 agg 587 ||| Sbjct: 428 agg 430
>dbj|AK065116.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001O09, full insert sequence Length = 1757 Score = 133 bits (67), Expect = 7e-28 Identities = 154/183 (84%) Strand = Plus / Plus Query: 405 tgcaccgccacctcaagcggctcaacaagccggccgtcaagagcatagagagccctgacg 464 ||||| ||||||||| ||||||||||||| || || || ||||| ||||| ||||| | Sbjct: 240 tgcacagccacctcaggcggctcaacaaggcgcccctcgccagcatcgagagtcctgatg 299 Query: 465 gggacatcatagactgcgtgcacatctcgcaccagccggccttcgaccaccctttcctca 524 | |||||||||||||| ||||||||||| ||||||| ||||| || ||||||||||||| Sbjct: 300 gagacatcatagactgtgtgcacatctccaaccagcctgcctttgatcaccctttcctca 359 Query: 525 agaaccacaccatccagatgagaccgagctatcacccggagggcctgtacgacgagtcca 584 |||||||||| ||||||||||| || || ||||| || |||||||| || ||||||| Sbjct: 360 agaaccacactatccagatgaggcctgattaccacccagaaggcctgtatgatgagtcca 419 Query: 585 agg 587 ||| Sbjct: 420 agg 422
>dbj|AK061739.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-E10, full insert sequence Length = 1772 Score = 133 bits (67), Expect = 7e-28 Identities = 154/183 (84%) Strand = Plus / Plus Query: 405 tgcaccgccacctcaagcggctcaacaagccggccgtcaagagcatagagagccctgacg 464 ||||| ||||||||| ||||||||||||| || || || ||||| ||||| ||||| | Sbjct: 382 tgcacagccacctcaggcggctcaacaaggcgcccctcgccagcatcgagagtcctgatg 441 Query: 465 gggacatcatagactgcgtgcacatctcgcaccagccggccttcgaccaccctttcctca 524 | |||||||||||||| ||||||||||| ||||||| ||||| || ||||||||||||| Sbjct: 442 gagacatcatagactgtgtgcacatctccaaccagcctgcctttgatcaccctttcctca 501 Query: 525 agaaccacaccatccagatgagaccgagctatcacccggagggcctgtacgacgagtcca 584 |||||||||| ||||||||||| || || ||||| || |||||||| || ||||||| Sbjct: 502 agaaccacactatccagatgaggcctgattaccacccagaaggcctgtatgatgagtcca 561 Query: 585 agg 587 ||| Sbjct: 562 agg 564
>gb|AY108738.1| Zea mays PCO103663 mRNA sequence Length = 923 Score = 131 bits (66), Expect = 3e-27 Identities = 114/130 (87%) Strand = Plus / Plus Query: 405 tgcaccgccacctcaagcggctcaacaagccggccgtcaagagcatagagagccctgacg 464 ||||||| ||||||||||| |||||||||||||||||||||||||| ||||| || || | Sbjct: 381 tgcaccggcacctcaagcgcctcaacaagccggccgtcaagagcatcgagagtccagatg 440 Query: 465 gggacatcatagactgcgtgcacatctcgcaccagccggccttcgaccaccctttcctca 524 | |||||||| ||||||||||| ||||| |||||||| || || || || ||| |||||| Sbjct: 441 gagacatcatcgactgcgtgcatatctcccaccagccagcgtttgatcatcctctcctca 500 Query: 525 agaaccacac 534 |||||||||| Sbjct: 501 agaaccacac 510
>ref|XM_477068.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1812 Score = 121 bits (61), Expect = 3e-24 Identities = 136/161 (84%) Strand = Plus / Plus Query: 386 aggtcgccggaggccaggatgcaccgccacctcaagcggctcaacaagccggccgtcaag 445 |||||||||| ||| ||| ||||||| ||||||||| ||||||||||||||||||||||| Sbjct: 350 aggtcgccggcggcgagggtgcaccggcacctcaagaggctcaacaagccggccgtcaag 409 Query: 446 agcatagagagccctgacggggacatcatagactgcgtgcacatctcgcaccagccggcc 505 ||||| |||||||| || || |||||||| ||||||||||| |||| ||||| || || Sbjct: 410 agcatcgagagcccagatggagacatcatcgactgcgtgcatctctctcaccaaccagca 469 Query: 506 ttcgaccaccctttcctcaagaaccacaccatccagatgag 546 || || || || | ||||||||||| || |||||||||| Sbjct: 470 tttgatcatcccctactcaagaaccatactctccagatgag 510
>dbj|AK103449.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033129H24, full insert sequence Length = 1811 Score = 121 bits (61), Expect = 3e-24 Identities = 136/161 (84%) Strand = Plus / Plus Query: 386 aggtcgccggaggccaggatgcaccgccacctcaagcggctcaacaagccggccgtcaag 445 |||||||||| ||| ||| ||||||| ||||||||| ||||||||||||||||||||||| Sbjct: 349 aggtcgccggcggcgagggtgcaccggcacctcaagaggctcaacaagccggccgtcaag 408 Query: 446 agcatagagagccctgacggggacatcatagactgcgtgcacatctcgcaccagccggcc 505 ||||| |||||||| || || |||||||| ||||||||||| |||| ||||| || || Sbjct: 409 agcatcgagagcccagatggagacatcatcgactgcgtgcatctctctcaccaaccagca 468 Query: 506 ttcgaccaccctttcctcaagaaccacaccatccagatgag 546 || || || || | ||||||||||| || |||||||||| Sbjct: 469 tttgatcatcccctactcaagaaccatactctccagatgag 509
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 105 bits (53), Expect = 2e-19 Identities = 80/89 (89%) Strand = Plus / Plus Query: 453 agagccctgacggggacatcatagactgcgtgcacatctcgcaccagccggccttcgacc 512 ||||||| || |||||||||||||| |||||||||||||| |||||||| || ||||| | Sbjct: 33428466 agagcccagatggggacatcatagattgcgtgcacatctcacaccagccagctttcgatc 33428525 Query: 513 accctttcctcaagaaccacaccatccag 541 | || |||||||||||||||||||||||| Sbjct: 33428526 atcccttcctcaagaaccacaccatccag 33428554 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 371 gcggtggccgcggcgaggtcgccggaggccaggatgcaccgccacctcaagcggctcaac 430 |||| ||| ||||||||||| |||| || ||| |||||| ||||| |||||||||||| Sbjct: 33427871 gcggcggcggcggcgaggtctccggcggggagggcgcaccggcacctgaagcggctcaac 33427930 Query: 431 aagccggccgtcaagagcat 450 |||||||| || |||||||| Sbjct: 33427931 aagccggcggtgaagagcat 33427950 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 164 cccggaggcggcgcggcggta 184 ||||||||||||||||||||| Sbjct: 2759097 cccggaggcggcgcggcggta 2759117 Score = 40.1 bits (20), Expect = 8.2 Identities = 41/48 (85%) Strand = Plus / Plus Query: 539 cagatgagaccgagctatcacccggagggcctgtacgacgagtccaag 586 |||||||| |||| ||| || || || |||||||||||||| |||||| Sbjct: 33428642 cagatgaggccgaactaccatcccgatggcctgtacgacgaatccaag 33428689
>gb|AC135958.2| Oryza sativa chromosome 3 BAC OSJNBa0059E14 genomic sequence, complete sequence Length = 154555 Score = 105 bits (53), Expect = 2e-19 Identities = 80/89 (89%) Strand = Plus / Minus Query: 453 agagccctgacggggacatcatagactgcgtgcacatctcgcaccagccggccttcgacc 512 ||||||| || |||||||||||||| |||||||||||||| |||||||| || ||||| | Sbjct: 69645 agagcccagatggggacatcatagattgcgtgcacatctcacaccagccagctttcgatc 69586 Query: 513 accctttcctcaagaaccacaccatccag 541 | || |||||||||||||||||||||||| Sbjct: 69585 atcccttcctcaagaaccacaccatccag 69557 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 371 gcggtggccgcggcgaggtcgccggaggccaggatgcaccgccacctcaagcggctcaac 430 |||| ||| ||||||||||| |||| || ||| |||||| ||||| |||||||||||| Sbjct: 70240 gcggcggcggcggcgaggtctccggcggggagggcgcaccggcacctgaagcggctcaac 70181 Query: 431 aagccggccgtcaagagcat 450 |||||||| || |||||||| Sbjct: 70180 aagccggcggtgaagagcat 70161 Score = 40.1 bits (20), Expect = 8.2 Identities = 41/48 (85%) Strand = Plus / Minus Query: 539 cagatgagaccgagctatcacccggagggcctgtacgacgagtccaag 586 |||||||| |||| ||| || || || |||||||||||||| |||||| Sbjct: 69469 cagatgaggccgaactaccatcccgatggcctgtacgacgaatccaag 69422
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 105 bits (53), Expect = 2e-19 Identities = 80/89 (89%) Strand = Plus / Plus Query: 453 agagccctgacggggacatcatagactgcgtgcacatctcgcaccagccggccttcgacc 512 ||||||| || |||||||||||||| |||||||||||||| |||||||| || ||||| | Sbjct: 33518976 agagcccagatggggacatcatagattgcgtgcacatctcacaccagccagctttcgatc 33519035 Query: 513 accctttcctcaagaaccacaccatccag 541 | || |||||||||||||||||||||||| Sbjct: 33519036 atcccttcctcaagaaccacaccatccag 33519064 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 371 gcggtggccgcggcgaggtcgccggaggccaggatgcaccgccacctcaagcggctcaac 430 |||| ||| ||||||||||| |||| || ||| |||||| ||||| |||||||||||| Sbjct: 33518381 gcggcggcggcggcgaggtctccggcggggagggcgcaccggcacctgaagcggctcaac 33518440 Query: 431 aagccggccgtcaagagcat 450 |||||||| || |||||||| Sbjct: 33518441 aagccggcggtgaagagcat 33518460 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 164 cccggaggcggcgcggcggta 184 ||||||||||||||||||||| Sbjct: 2759207 cccggaggcggcgcggcggta 2759227 Score = 40.1 bits (20), Expect = 8.2 Identities = 41/48 (85%) Strand = Plus / Plus Query: 539 cagatgagaccgagctatcacccggagggcctgtacgacgagtccaag 586 |||||||| |||| ||| || || || |||||||||||||| |||||| Sbjct: 33519152 cagatgaggccgaactaccatcccgatggcctgtacgacgaatccaag 33519199
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 97.6 bits (49), Expect = 4e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 453 agagccctgacggggacatcatagactgcgtgcacatctcgcaccagccggccttcgacc 512 |||| ||||| || |||||||||||||| ||||||||||| ||||||| ||||| || | Sbjct: 23125844 agagtcctgatggagacatcatagactgtgtgcacatctccaaccagcctgcctttgatc 23125903 Query: 513 accctttcctcaagaaccacaccatccag 541 |||||||||||||||||||||| |||||| Sbjct: 23125904 accctttcctcaagaaccacactatccag 23125932 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 386 aggtcgccggaggccaggatgcaccgccacctcaagcggctcaacaagccggccgtcaag 445 |||||||||| ||| ||| ||||||| ||||||||| ||||||||||||||||||||||| Sbjct: 5714512 aggtcgccggcggcgagggtgcaccggcacctcaagaggctcaacaagccggccgtcaag 5714571 Query: 446 agcat 450 ||||| Sbjct: 5714572 agcat 5714576 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Minus Query: 166 cggaggcggcgcggcggtaggtcgccggcggcga 199 ||||||||||||||| | || ||||||||||||| Sbjct: 12785902 cggaggcggcgcggctggagatcgccggcggcga 12785869 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 370 ggcggtggccgcggcgaggtcgccg 394 ||||||||| ||||||||||||||| Sbjct: 28832003 ggcggtggcggcggcgaggtcgccg 28832027 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 405 tgcaccgccacctcaagcggctcaacaag 433 ||||| ||||||||| ||||||||||||| Sbjct: 23125026 tgcacagccacctcaggcggctcaacaag 23125054
>dbj|AP003845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1699_E05 Length = 170666 Score = 97.6 bits (49), Expect = 4e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 453 agagccctgacggggacatcatagactgcgtgcacatctcgcaccagccggccttcgacc 512 |||| ||||| || |||||||||||||| ||||||||||| ||||||| ||||| || | Sbjct: 70028 agagtcctgatggagacatcatagactgtgtgcacatctccaaccagcctgcctttgatc 70087 Query: 513 accctttcctcaagaaccacaccatccag 541 |||||||||||||||||||||| |||||| Sbjct: 70088 accctttcctcaagaaccacactatccag 70116 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 405 tgcaccgccacctcaagcggctcaacaag 433 ||||| ||||||||| ||||||||||||| Sbjct: 69210 tgcacagccacctcaggcggctcaacaag 69238
>gb|AY112065.1| Zea mays CL4497_1 mRNA sequence Length = 930 Score = 93.7 bits (47), Expect = 6e-16 Identities = 74/83 (89%) Strand = Plus / Plus Query: 462 acggggacatcatagactgcgtgcacatctcgcaccagccggccttcgaccaccctttcc 521 |||| |||||||||||||||||||| ||||| ||||||| ||||| || || ||||||| Sbjct: 252 acggagacatcatagactgcgtgcatatctccaaccagcccgccttggatcatcctttcc 311 Query: 522 tcaagaaccacaccatccagatg 544 |||||||||||||| |||||||| Sbjct: 312 tcaagaaccacaccgtccagatg 334
>dbj|AP003943.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1119_B04 Length = 151721 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 386 aggtcgccggaggccaggatgcaccgccacctcaagcggctcaacaagccggccgtcaag 445 |||||||||| ||| ||| ||||||| ||||||||| ||||||||||||||||||||||| Sbjct: 21540 aggtcgccggcggcgagggtgcaccggcacctcaagaggctcaacaagccggccgtcaag 21599 Query: 446 agcat 450 ||||| Sbjct: 21600 agcat 21604
>ref|NM_189476.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1290 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 453 agagccctgacggggacatcatagactgcgtgcacatctcgcaccagccggccttcgacc 512 ||||||| || || || ||||||||||| ||||| ||||| | ||||| || ||||| | Sbjct: 275 agagcccagatggagatatcatagactgtgtgcatatctccaaacagcctgcgttcgatc 334 Query: 513 accctttcctcaagaaccacaccatccag 541 | ||| |||||||||||||||| |||||| Sbjct: 335 atcctctcctcaagaaccacacaatccag 363
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 453 agagccctgacggggacatcatagactgcgtgcacatctcgcaccagccggccttcgacc 512 ||||||| || || || ||||||||||| ||||| ||||| | ||||| || ||||| | Sbjct: 42952822 agagcccagatggagatatcatagactgtgtgcatatctccaaacagcctgcgttcgatc 42952881 Query: 513 accctttcctcaagaaccacaccatccag 541 | ||| |||||||||||||||| |||||| Sbjct: 42952882 atcctctcctcaagaaccacacaatccag 42952910 Score = 42.1 bits (21), Expect = 2.1 Identities = 57/69 (82%) Strand = Plus / Plus Query: 473 atagactgcgtgcacatctcgcaccagccggccttcgaccaccctttcctcaagaaccac 532 |||||||| ||||||||||| ||||| || ||||| || ||| ||||||||||||| Sbjct: 20647999 atagactgtgtgcacatctccagacagcctgcattcgatcatcctctcctcaagaaccat 20648058 Query: 533 accatccag 541 || |||||| Sbjct: 20648059 acaatccag 20648067 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 aggtcgccggcggcgagggg 203 |||||||||||||||||||| Sbjct: 42638495 aggtcgccggcggcgagggg 42638476
>dbj|AP003298.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0698H10 Length = 153449 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 453 agagccctgacggggacatcatagactgcgtgcacatctcgcaccagccggccttcgacc 512 ||||||| || || || ||||||||||| ||||| ||||| | ||||| || ||||| | Sbjct: 53701 agagcccagatggagatatcatagactgtgtgcatatctccaaacagcctgcgttcgatc 53760 Query: 513 accctttcctcaagaaccacaccatccag 541 | ||| |||||||||||||||| |||||| Sbjct: 53761 atcctctcctcaagaaccacacaatccag 53789
>dbj|AP003277.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518C01 Length = 173555 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 453 agagccctgacggggacatcatagactgcgtgcacatctcgcaccagccggccttcgacc 512 ||||||| || || || ||||||||||| ||||| ||||| | ||||| || ||||| | Sbjct: 146556 agagcccagatggagatatcatagactgtgtgcatatctccaaacagcctgcgttcgatc 146615 Query: 513 accctttcctcaagaaccacaccatccag 541 | ||| |||||||||||||||| |||||| Sbjct: 146616 atcctctcctcaagaaccacacaatccag 146644
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 406 gcaccgccacctcaagcggctcaacaagccggccgtcaagagcat 450 |||||| ||||| ||| |||||||||||||||| || |||||||| Sbjct: 4299294 gcaccggcacctgaaggggctcaacaagccggcggtgaagagcat 4299338 Score = 42.1 bits (21), Expect = 2.1 Identities = 72/89 (80%) Strand = Plus / Minus Query: 453 agagccctgacggggacatcatagactgcgtgcacatctcgcaccagccggccttcgacc 512 ||||||| || || || ||||||||||| ||||||||||| ||||| || ||||| | Sbjct: 9577480 agagcccagatggagatatcatagactgtgtgcacatctccagacagcctgcattcgatc 9577421 Query: 513 accctttcctcaagaaccacaccatccag 541 | ||| |||||||| |||| || |||||| Sbjct: 9577420 atcctctcctcaaggaccatacaatccag 9577392
>dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0554A06 Length = 165311 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 406 gcaccgccacctcaagcggctcaacaagccggccgtcaagagcat 450 |||||| ||||| ||| |||||||||||||||| || |||||||| Sbjct: 144515 gcaccggcacctgaaggggctcaacaagccggcggtgaagagcat 144559
>dbj|AK107760.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-133-A08, full insert sequence Length = 730 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 406 gcaccgccacctcaagcggctcaacaagccggccgtcaagagcat 450 |||||| ||||| ||| |||||||||||||||| || |||||||| Sbjct: 224 gcaccggcacctgaaggggctcaacaagccggcggtgaagagcat 268
>ref|NM_129986.2| Arabidopsis thaliana unknown protein AT2G44220 mRNA, complete cds Length = 1344 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 527 aaccacaccatccagatgagaccgag 552 ||||| |||||||||||||||||||| Sbjct: 215 aaccataccatccagatgagaccgag 240
>ref|NM_193406.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1020 Score = 44.1 bits (22), Expect = 0.52 Identities = 58/70 (82%) Strand = Plus / Plus Query: 473 atagactgcgtgcacatctcgcaccagccggccttcgaccaccctttcctcaagaaccac 532 |||||||| ||||||||||| ||||| || ||||| || ||| ||||||||||||| Sbjct: 196 atagactgtgtgcacatctccagacagcctgcattcgatcatcctctcctcaagaaccat 255 Query: 533 accatccaga 542 || ||||||| Sbjct: 256 acaatccaga 265
>gb|AC044860.11| Homo sapiens chromosome 15, clone RP11-561C5, complete sequence Length = 233775 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 123 ctcccccctccccgcattgttt 144 |||||||||||||||||||||| Sbjct: 107937 ctcccccctccccgcattgttt 107958
>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29 Length = 339650 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 372 cggtggccgcggcgaggtcgcc 393 |||||||||||||||||||||| Sbjct: 47208 cggtggccgcggcgaggtcgcc 47187
>gb|AC135995.7| Homo sapiens chromosome 15, clone RP13-608F4, complete sequence Length = 157246 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 123 ctcccccctccccgcattgttt 144 |||||||||||||||||||||| Sbjct: 32517 ctcccccctccccgcattgttt 32538
>gb|AC135735.2| Homo sapiens chromosome 15, clone RP11-1270F20, complete sequence Length = 175310 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 123 ctcccccctccccgcattgttt 144 |||||||||||||||||||||| Sbjct: 97651 ctcccccctccccgcattgttt 97630
>gb|AC126605.4| Homo sapiens chromosome 15, clone RP11-606M5, complete sequence Length = 169125 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 123 ctcccccctccccgcattgttt 144 |||||||||||||||||||||| Sbjct: 104133 ctcccccctccccgcattgttt 104154
>gb|AC110291.6| Homo sapiens chromosome 15, clone RP11-379H8, complete sequence Length = 186812 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 123 ctcccccctccccgcattgttt 144 |||||||||||||||||||||| Sbjct: 58080 ctcccccctccccgcattgttt 58059
>gb|AC108000.5| Homo sapiens chromosome 15, clone CTD-2116G1, complete sequence Length = 167587 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 123 ctcccccctccccgcattgttt 144 |||||||||||||||||||||| Sbjct: 130623 ctcccccctccccgcattgttt 130644
>gb|AC127482.10| Homo sapiens chromosome 15, clone CTD-2547M4, complete sequence Length = 193680 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 123 ctcccccctccccgcattgttt 144 |||||||||||||||||||||| Sbjct: 189090 ctcccccctccccgcattgttt 189069 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 123 ctcccccctccccgcattgttt 144 |||||||||||||||||||||| Sbjct: 98844 ctcccccctccccgcattgttt 98823
>gb|AC005630.1| Homo sapiens PAC clone RP5-1129D5 from 15, complete sequence Length = 137699 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 123 ctcccccctccccgcattgttt 144 |||||||||||||||||||||| Sbjct: 103574 ctcccccctccccgcattgttt 103553
>gb|AC010725.5| Homo sapiens BAC clone RP11-156N7 from 15, complete sequence Length = 155351 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 123 ctcccccctccccgcattgttt 144 |||||||||||||||||||||| Sbjct: 55099 ctcccccctccccgcattgttt 55120
>gb|AC011295.3| Homo sapiens BAC clone RP11-96J23 from 15, complete sequence Length = 148698 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 123 ctcccccctccccgcattgttt 144 |||||||||||||||||||||| Sbjct: 144114 ctcccccctccccgcattgttt 144093 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 123 ctcccccctccccgcattgttt 144 |||||||||||||||||||||| Sbjct: 65100 ctcccccctccccgcattgttt 65079
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 375 tggccgcggcgaggtcgccgga 396 |||||||||||||||||||||| Sbjct: 5037428 tggccgcggcgaggtcgccgga 5037407
>gb|AC010724.6|AC010724 Homo sapiens BAC clone RP11-152F13 from 15, complete sequence Length = 157200 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 123 ctcccccctccccgcattgttt 144 |||||||||||||||||||||| Sbjct: 45446 ctcccccctccccgcattgttt 45467
>gb|AC012064.3|AC012064 Homo sapiens BAC clone RP11-123N1 from 15, complete sequence Length = 170520 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 123 ctcccccctccccgcattgttt 144 |||||||||||||||||||||| Sbjct: 165936 ctcccccctccccgcattgttt 165915
>gb|AC126339.6| Homo sapiens chromosome 15, clone RP13-98N21, complete sequence Length = 95499 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 123 ctcccccctccccgcattgttt 144 |||||||||||||||||||||| Sbjct: 66375 ctcccccctccccgcattgttt 66396
>gb|AC139425.3| Homo sapiens chromosome 15, clone RP13-996F3, complete sequence Length = 132528 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 123 ctcccccctccccgcattgttt 144 |||||||||||||||||||||| Sbjct: 86529 ctcccccctccccgcattgttt 86550
>gb|AC136698.6| Homo sapiens chromosome 15, clone RP13-262C2, complete sequence Length = 169605 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 123 ctcccccctccccgcattgttt 144 |||||||||||||||||||||| Sbjct: 128447 ctcccccctccccgcattgttt 128426
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 370 ggcggtggccgcggcgaggtcgccgg 395 |||| ||||||||||||||||||||| Sbjct: 4164041 ggcgatggccgcggcgaggtcgccgg 4164066 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 ggcggtggccgcggcgaggt 389 |||||||||||||||||||| Sbjct: 3276923 ggcggtggccgcggcgaggt 3276942
>dbj|AP005325.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0710F09 Length = 198867 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Minus Query: 166 cggaggcggcgcggcggtaggtcgccggcggcga 199 ||||||||||||||| | || ||||||||||||| Sbjct: 44026 cggaggcggcgcggctggagatcgccggcggcga 43993
>gb|AY954838.1| Arabidopsis thaliana hypothetical protein (At2g44220) mRNA, complete cds Length = 1182 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 527 aaccacaccatccagatgagaccgag 552 ||||| |||||||||||||||||||| Sbjct: 196 aaccataccatccagatgagaccgag 221
>ref|NM_129989.3| Arabidopsis thaliana unknown protein AT2G44250 mRNA, complete cds Length = 1352 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 515 cctttcctcaagaaccacaccatccagatgagaccga 551 ||||| ||||| ||||||||||| |||||||| |||| Sbjct: 223 cctttactcaaaaaccacaccattcagatgaggccga 259
>ref|XM_480349.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4178 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 117 gcgtgcctcccccctccccgc 137 ||||||||||||||||||||| Sbjct: 102 gcgtgcctcccccctccccgc 122
>ref|XM_470240.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 873 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 cccggaggcggcgcggcggta 184 ||||||||||||||||||||| Sbjct: 312 cccggaggcggcgcggcggta 292
>ref|XM_479552.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1581 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 370 ggcggtggccgcggcgaggtcgccg 394 ||||||||| ||||||||||||||| Sbjct: 901 ggcggtggcggcggcgaggtcgccg 925
>gb|AC126217.3| Rattus norvegicus 1 BAC CH230-9L4 (Children's Hospital Oakland Research Institute) complete sequence Length = 243051 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 gttcttgaagttgtagccggagcaa 256 |||||||||||| |||||||||||| Sbjct: 154986 gttcttgaagttctagccggagcaa 155010
>gb|AC131341.3| Mus musculus BAC clone RP24-263O10 from chromosome 17, complete sequence Length = 152220 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 517 tttcctcaagaaccacaccat 537 ||||||||||||||||||||| Sbjct: 144501 tttcctcaagaaccacaccat 144521
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 4 caacgcggccgggttgcgcac 24 ||||||||||||||||||||| Sbjct: 3689120 caacgcggccgggttgcgcac 3689140
>gb|AC119640.13| Rattus norvegicus 13 BAC CH230-444B7 (Children's Hospital Oakland Research Institute) complete sequence Length = 120319 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 gttcttgaagttgtagccggagcaa 256 |||||||||||||||||| |||||| Sbjct: 64219 gttcttgaagttgtagccagagcaa 64243
>gb|AC114699.5| Rattus norvegicus 19 BAC CH230-235A3 (Children's Hospital Oakland Research Institute) complete sequence Length = 224930 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 gttcttgaagttgtagccggagcaa 256 |||||||||||| |||||||||||| Sbjct: 51623 gttcttgaagttctagccggagcaa 51647
>gb|AE011954.1| Xanthomonas axonopodis pv. citri str. 306, section 332 of 469 of the complete genome Length = 12615 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 4 caacgcggccgggttgcgcac 24 ||||||||||||||||||||| Sbjct: 1393 caacgcggccgggttgcgcac 1413
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 117 gcgtgcctcccccctccccgc 137 ||||||||||||||||||||| Sbjct: 4532273 gcgtgcctcccccctccccgc 4532253
>gb|AC154787.2| Mus musculus BAC clone RP24-468J5 from chromosome 17, complete sequence Length = 217844 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 517 tttcctcaagaaccacaccat 537 ||||||||||||||||||||| Sbjct: 110343 tttcctcaagaaccacaccat 110323
>dbj|AP004258.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0024F24 Length = 172642 Score = 42.1 bits (21), Expect = 2.1 Identities = 57/69 (82%) Strand = Plus / Plus Query: 473 atagactgcgtgcacatctcgcaccagccggccttcgaccaccctttcctcaagaaccac 532 |||||||| ||||||||||| ||||| || ||||| || ||| ||||||||||||| Sbjct: 109975 atagactgtgtgcacatctccagacagcctgcattcgatcatcctctcctcaagaaccat 110034 Query: 533 accatccag 541 || |||||| Sbjct: 110035 acaatccag 110043
>gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0038D20, from chromosome 3, complete sequence Length = 165395 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 164 cccggaggcggcgcggcggta 184 ||||||||||||||||||||| Sbjct: 31053 cccggaggcggcgcggcggta 31073
>gb|AC105734.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0050N02, complete sequence Length = 133373 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 164 cccggaggcggcgcggcggta 184 ||||||||||||||||||||| Sbjct: 104016 cccggaggcggcgcggcggta 104036
>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome Length = 1669695 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 436 ggccgtcaagagcatagagag 456 ||||||||||||||||||||| Sbjct: 1315323 ggccgtcaagagcatagagag 1315303
>dbj|AP003878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1120_C08 Length = 150300 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 117 gcgtgcctcccccctccccgc 137 ||||||||||||||||||||| Sbjct: 56121 gcgtgcctcccccctccccgc 56101
>dbj|AP005099.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0008J01 Length = 159900 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 370 ggcggtggccgcggcgaggtcgccg 394 ||||||||| ||||||||||||||| Sbjct: 89689 ggcggtggcggcggcgaggtcgccg 89713
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 162 tccccggaggcggcgcggcgg 182 ||||||||||||||||||||| Sbjct: 901175 tccccggaggcggcgcggcgg 901195
>dbj|AP003540.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0450D12 Length = 176431 Score = 42.1 bits (21), Expect = 2.1 Identities = 72/89 (80%) Strand = Plus / Minus Query: 453 agagccctgacggggacatcatagactgcgtgcacatctcgcaccagccggccttcgacc 512 ||||||| || || || ||||||||||| ||||||||||| ||||| || ||||| | Sbjct: 36097 agagcccagatggagatatcatagactgtgtgcacatctccagacagcctgcattcgatc 36038 Query: 513 accctttcctcaagaaccacaccatccag 541 | ||| |||||||| |||| || |||||| Sbjct: 36037 atcctctcctcaaggaccatacaatccag 36009
>dbj|AK109394.3| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-E06, full insert sequence Length = 1144 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 cccggaggcggcgcggcggta 184 ||||||||||||||||||||| Sbjct: 350 cccggaggcggcgcggcggta 330
>dbj|AP004619.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0583B06 Length = 134442 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 117 gcgtgcctcccccctccccgc 137 ||||||||||||||||||||| Sbjct: 98163 gcgtgcctcccccctccccgc 98143
>dbj|AK101719.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033060P10, full insert sequence Length = 4177 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 117 gcgtgcctcccccctccccgc 137 ||||||||||||||||||||| Sbjct: 102 gcgtgcctcccccctccccgc 122
>dbj|AK063414.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-B07, full insert sequence Length = 3278 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 117 gcgtgcctcccccctccccgc 137 ||||||||||||||||||||| Sbjct: 145 gcgtgcctcccccctccccgc 165
>dbj|AP000679.7| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-21E14, complete sequence Length = 132641 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 58 agcgccagcgtcccgagtccc 78 ||||||||||||||||||||| Sbjct: 97826 agcgccagcgtcccgagtccc 97846
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 336 gcctgctggcggcggtgatatgcct 360 ||||||||||||||||||| ||||| Sbjct: 3907313 gcctgctggcggcggtgatctgcct 3907289
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 231 cgttcttgaagttgtagccgg 251 ||||||||||||||||||||| Sbjct: 115121 cgttcttgaagttgtagccgg 115101
>ref|NM_127493.2| Arabidopsis thaliana unknown protein AT2G19360 mRNA, complete cds Length = 1281 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 522 tcaagaaccacaccatccagatgagacc 549 |||| ||||||||||| ||||||||||| Sbjct: 221 tcaaaaaccacaccattcagatgagacc 248
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 caaggtgctgggcgacagaa 273 |||||||||||||||||||| Sbjct: 774973 caaggtgctgggcgacagaa 774992
>gb|AC102219.11| Mus musculus chromosome 15, clone RP24-96K14, complete sequence Length = 194425 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 ccccctccccgcattgtttc 145 |||||||||||||||||||| Sbjct: 172435 ccccctccccgcattgtttc 172454
>ref|NM_193404.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1137 Score = 40.1 bits (20), Expect = 8.2 Identities = 65/80 (81%) Strand = Plus / Plus Query: 470 atcatagactgcgtgcacatctcgcaccagccggccttcgaccaccctttcctcaagaac 529 |||||||| || ||||||||||| | || || || |||||||| ||| | |||||| || Sbjct: 169 atcatagattgtgtgcacatctccaatcaacctgcattcgaccatcctcttctcaaggac 228 Query: 530 cacaccatccagatgagacc 549 || || ||||||||| |||| Sbjct: 229 catacaatccagatgcgacc 248
>gb|DQ149987.1| Streptomyces neyagawaensis concanamycin A biosynthetic gene cluster, complete sequence Length = 99892 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 gcggggcggtggccgcggcg 385 |||||||||||||||||||| Sbjct: 52967 gcggggcggtggccgcggcg 52948
>gb|AY102564.1| Arabidopsis thaliana hypothetical protein (At2g44220/F4I1.3) mRNA, complete cds Length = 1358 Score = 40.1 bits (20), Expect = 8.2 Identities = 24/26 (92%) Strand = Plus / Plus Query: 527 aaccacaccatccagatgagaccgag 552 ||||| |||||||||||||||| ||| Sbjct: 215 aaccataccatccagatgagacmgag 240
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gcgtcgtcgcgtgcctgctg 343 |||||||||||||||||||| Sbjct: 685192 gcgtcgtcgcgtgcctgctg 685173
>gb|AE011720.1| Xanthomonas axonopodis pv. citri str. 306, section 98 of 469 of the complete genome Length = 10983 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 ccggaggcggcgcggcggta 184 |||||||||||||||||||| Sbjct: 9097 ccggaggcggcgcggcggta 9116
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 cagacggcgagccgccccag 104 |||||||||||||||||||| Sbjct: 1008674 cagacggcgagccgccccag 1008655
>dbj|AP004365.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0458E05 Length = 193577 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 aggtcgccggcggcgagggg 203 |||||||||||||||||||| Sbjct: 159378 aggtcgccggcggcgagggg 159359
>emb|BX537257.4| Mouse DNA sequence from clone RP23-89C2 on chromosome 2, complete sequence Length = 79633 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 243 tgtagccggagcaaggtgctgggc 266 |||||| ||||||||||||||||| Sbjct: 59754 tgtagctggagcaaggtgctgggc 59731
>dbj|AK120690.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169H18, full insert sequence Length = 4054 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 aggtcgccggcggcgagggg 203 |||||||||||||||||||| Sbjct: 79 aggtcgccggcggcgagggg 60
>dbj|AK064194.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-D02, full insert sequence Length = 1552 Score = 40.1 bits (20), Expect = 8.2 Identities = 65/80 (81%) Strand = Plus / Plus Query: 470 atcatagactgcgtgcacatctcgcaccagccggccttcgaccaccctttcctcaagaac 529 |||||||| || ||||||||||| | || || || |||||||| ||| | |||||| || Sbjct: 217 atcatagattgtgtgcacatctccaatcaacctgcattcgaccatcctcttctcaaggac 276 Query: 530 cacaccatccagatgagacc 549 || || ||||||||| |||| Sbjct: 277 catacaatccagatgcgacc 296
>gb|AY111527.1| Zea mays CL34891_1 mRNA sequence Length = 586 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 519 tcctcaagaaccacaccatccagatgag 546 |||||||||||||||| || |||||||| Sbjct: 336 tcctcaagaaccacacaatacagatgag 363
>gb|AC165888.18| Mus musculus chromosome 3, clone RP24-352B14, complete sequence Length = 181505 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 gtgcctcccccctccccgca 138 |||||||||||||||||||| Sbjct: 113565 gtgcctcccccctccccgca 113546
>emb|AL807807.11| Mouse DNA sequence from clone RP23-284L15 on chromosome 4, complete sequence Length = 171570 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 gtgcctcccccctccccgca 138 |||||||||||||||||||| Sbjct: 166901 gtgcctcccccctccccgca 166920 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,228,599 Number of Sequences: 3902068 Number of extensions: 4228599 Number of successful extensions: 119096 Number of sequences better than 10.0: 91 Number of HSP's better than 10.0 without gapping: 95 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 116602 Number of HSP's gapped (non-prelim): 2490 length of query: 600 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 577 effective length of database: 17,143,297,704 effective search space: 9891682775208 effective search space used: 9891682775208 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)