ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd27a04 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X91660.1|HVPM2GENE H.vulgare mRNA for xyloglucan endotransglycosylase-like protein Length = 1110 Score = 827 bits (417), Expect = 0.0 Identities = 417/417 (100%) Strand = Plus / Plus Query: 1 ggcaagaaggagcaccagttctacctctggttcgacccctccgccgacttccacacctac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 425 ggcaagaaggagcaccagttctacctctggttcgacccctccgccgacttccacacctac 484 Query: 61 aagatcacatggaacccaaagaacatcatattcgaggtggacggcgtgccggtgaggacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 485 aagatcacatggaacccaaagaacatcatattcgaggtggacggcgtgccggtgaggacc 544 Query: 121 ttcaagaagtacgacggcctgccgttcccgtcggcgcggccgatgacggtgcacgcgacg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 545 ttcaagaagtacgacggcctgccgttcccgtcggcgcggccgatgacggtgcacgcgacg 604 Query: 181 ctgtgggacggcagctactgggcgacgcagcacggcaccgtcaagatccactggcgccac 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 605 ctgtgggacggcagctactgggcgacgcagcacggcaccgtcaagatccactggcgccac 664 Query: 241 gaccccttcgtcgtcccctaccagggctaccacgccaacggctgcgtccacgacaaggcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 665 gaccccttcgtcgtcccctaccagggctaccacgccaacggctgcgtccacgacaaggcc 724 Query: 301 accaacaagacctcctgccccgccggcagcgacgcctggatgcaccgcgagctcgacgac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 725 accaacaagacctcctgccccgccggcagcgacgcctggatgcaccgcgagctcgacgac 784 Query: 361 ggcgagctcagcaccgtcgcgtgggccgagcgcaactgcctctcctacaactactgc 417 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 785 ggcgagctcagcaccgtcgcgtgggccgagcgcaactgcctctcctacaactactgc 841
>gb|AY589588.1| Triticum aestivum endotransglucosylase/hydrolase XTH4 mRNA, complete cds Length = 1100 Score = 605 bits (305), Expect = e-170 Identities = 389/417 (93%) Strand = Plus / Plus Query: 1 ggcaagaaggagcaccagttctacctctggttcgacccctccgccgacttccacacctac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 434 ggcaagaaggagcaccagttctacctctggttcgacccctccgccgacttccacacctac 493 Query: 61 aagatcacatggaacccaaagaacatcatattcgaggtggacggcgtgccggtgaggacc 120 |||||||| |||||||| ||||||||||| |||||||| ||||||||||| ||| | ||| Sbjct: 494 aagatcacctggaaccccaagaacatcatcttcgaggtcgacggcgtgcccgtgcgcacc 553 Query: 121 ttcaagaagtacgacggcctgccgttcccgtcggcgcggccgatgacggtgcacgcgacg 180 ||||||||||||||||||||||| ||||| || ||||| |||||||||||||| ||| Sbjct: 554 ttcaagaagtacgacggcctgcccttcccctccagccggcccatgacggtgcacgccacg 613 Query: 181 ctgtgggacggcagctactgggcgacgcagcacggcaccgtcaagatccactggcgccac 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 614 ctgtgggacggcagctactgggcgacgcagcacggcaccgtcaagatccactggcgccac 673 Query: 241 gaccccttcgtcgtcccctaccagggctaccacgccaacggctgcgtccacgacaaggcc 300 |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 674 caccccttcgtcgtcccctacaaggcctaccacgccaacggctgcgtccacgacaaggcc 733 Query: 301 accaacaagacctcctgccccgccggcagcgacgcctggatgcaccgcgagctcgacgac 360 ||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 734 accaacaagacggcctgccccgccggcagcgacgcctggatgcgccgcgagctcggcgag 793 Query: 361 ggcgagctcagcaccgtcgcgtgggccgagcgcaactgcctctcctacaactactgc 417 | ||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 794 gaggagctcaagaccgtcgcctgggccgagcgcaactgcctctcctacaactactgc 850
>emb|AJ295944.1|FPR295944 Festuca pratensis mRNA for Xet2 protein Length = 1189 Score = 347 bits (175), Expect = 2e-92 Identities = 259/287 (90%) Strand = Plus / Plus Query: 1 ggcaagaaggagcaccagttctacctctggttcgacccctccgccgacttccacacctac 60 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 442 ggcaagaaggagcaccagttctacctctggttcgatccctccgccgatttccacacctac 501 Query: 61 aagatcacatggaacccaaagaacatcatattcgaggtggacggcgtgccggtgaggacc 120 |||||||| |||||||| |||||||||||||||||||||||| |||| |||||||||| Sbjct: 502 aagatcacctggaaccccaagaacatcatattcgaggtggacaacgtggcggtgaggacg 561 Query: 121 ttcaagaagtacgacggcctgccgttcccgtcggcgcggccgatgacggtgcacgcgacg 180 |||||||| ||||| | ||||||||||||| || |||||||| ||||||||||||| Sbjct: 562 ttcaagaactacgatgacctgccgttcccgacgagcaggccgatggaggtgcacgcgacg 621 Query: 181 ctgtgggacggcagctactgggcgacgcagcacggcaccgtcaagatccactggcgccac 240 ||||||||||||||||||||||| ||||||||||||| |||||||||||||||| | ||| Sbjct: 622 ctgtgggacggcagctactgggcaacgcagcacggcaacgtcaagatccactggaggcac 681 Query: 241 gaccccttcgtcgtcccctaccagggctaccacgccaacggctgcgt 287 || |||||||| ||| |||||| | ||||||||||||||||||||| Sbjct: 682 gagcccttcgtggtctcctaccgcgcctaccacgccaacggctgcgt 728 Score = 93.7 bits (47), Expect = 4e-16 Identities = 89/103 (86%) Strand = Plus / Plus Query: 315 ctgccccgccggcagcgacgcctggatgcaccgcgagctcgacgacggcgagctcagcac 374 |||||||| |||| |||||||||||||||| | ||||||| ||||| |||||| ||| Sbjct: 750 ctgccccgacggctccgacgcctggatgcacagggagctcggcgacgaggagctcgacac 809 Query: 375 cgtcgcgtgggccgagcgcaactgcctctcctacaactactgc 417 |||||| ||| | |||||||||||||| ||||||||||||||| Sbjct: 810 cgtcgcctggacggagcgcaactgcctgtcctacaactactgc 852
>gb|AY589587.1| Triticum aestivum endotransglucosylase/hydrolase XTH3 mRNA, complete cds Length = 938 Score = 274 bits (138), Expect = 2e-70 Identities = 251/286 (87%), Gaps = 2/286 (0%) Strand = Plus / Plus Query: 4 aagaaggagcaccagttctacctctggttcgacccctccgccgacttccacacctacaag 63 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 440 aagaaggagcaccagttctacctctggttcgaccccaccgccgacttccacacctacaag 499 Query: 64 atcacatggaacccaaagaacatcatattcgaggtggacggcgtgccggtgaggaccttc 123 ||| |||||||| ||||||||||||||| |||| |||| ||||||||||||||||||| Sbjct: 500 atcgtctggaaccccaagaacatcatattccaggtcgacgacgtgccggtgaggaccttc 559 Query: 124 aagaagtacgacggcctgccgttcccg-tcggcgcggccgatgacggtgcacgcgacgct 182 ||||||||||||| |||||||| |||| | || | |||||||| ||||||||| ||||| Sbjct: 560 aagaagtacgacgacctgccgtacccgagcagc-cagccgatgatggtgcacgccacgct 618 Query: 183 gtgggacggcagctactgggcgacgcagcacggcaccgtcaagatccactggcgccacga 242 ||||||||||||||||||||||| | ||||||| |||||||||| ||||| |||| | Sbjct: 619 ctgggacggcagctactgggcgacccggcacggcgacgtcaagatcgactggagccaggc 678 Query: 243 ccccttcgtcgtcccctaccagggctaccacgccaacggctgcgtc 288 || ||||||||| ||||| |||||| | |||||||||||||| Sbjct: 679 gccgttcgtcgtcaactaccgcggctactcctccaacggctgcgtc 724 Score = 46.1 bits (23), Expect = 0.091 Identities = 26/27 (96%) Strand = Plus / Plus Query: 316 tgccccgccggcagcgacgcctggatg 342 |||||||||||||||||||| |||||| Sbjct: 746 tgccccgccggcagcgacgcgtggatg 772
>emb|X93173.1|HVXETPM5 H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (PM5) Length = 1188 Score = 272 bits (137), Expect = 8e-70 Identities = 253/289 (87%), Gaps = 2/289 (0%) Strand = Plus / Plus Query: 1 ggcaagaaggagcaccagttctacctctggttcgacccctccgccgacttccacacctac 60 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 449 ggcaagaaggagcaccagttctacctctggttcgaccccaccgccgacttccacacctac 508 Query: 61 aagatcacatggaacccaaagaacatcatattcgaggtggacggcgtgccggtgaggacc 120 |||||| |||||||| ||||||||||||||| ||||||||| ||||||||||||||| Sbjct: 509 aagatcgtctggaaccccaagaacatcatattccaggtggacgacgtgccggtgaggacg 568 Query: 121 ttcaagaagtacgacggcctgccgttcccg-tcggcgcggccgatgacggtgcacgcgac 179 |||||||||||||||| |||||||| |||| | || | |||||||||||||||||| || Sbjct: 569 ttcaagaagtacgacgacctgccgtacccgagcagc-cagccgatgacggtgcacgccac 627 Query: 180 gctgtgggacggcagctactgggcgacgcagcacggcaccgtcaagatccactggcgcca 239 ||| |||||||||||||||||||| || | |||||| |||||||||| ||||| ||| Sbjct: 628 gctctgggacggcagctactgggccacccgccacggcgacgtcaagatcgactggaccca 687 Query: 240 cgaccccttcgtcgtcccctaccagggctaccacgccaacggctgcgtc 288 | |||||||||||| ||||| |||||| | |||||||||||||| Sbjct: 688 ggcgcccttcgtcgtcaactaccgcggctacacctccaacggctgcgtc 736 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 316 tgccccgccggcagcgacgcctggatg 342 ||||||||||||||||||||||||||| Sbjct: 758 tgccccgccggcagcgacgcctggatg 784
>gb|AY589586.1| Triticum aestivum endotransglucosylase/hydrolase XTH2 mRNA, complete cds Length = 1107 Score = 272 bits (137), Expect = 8e-70 Identities = 253/289 (87%), Gaps = 2/289 (0%) Strand = Plus / Plus Query: 1 ggcaagaaggagcaccagttctacctctggttcgacccctccgccgacttccacacctac 60 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 438 ggcaagaaggagcaccagttctacctctggttcgaccccaccgccgacttccacacctac 497 Query: 61 aagatcacatggaacccaaagaacatcatattcgaggtggacggcgtgccggtgaggacc 120 |||||| |||||||| ||||||||||||||| ||||||||| ||||||||||||||| Sbjct: 498 aagatcgtctggaaccccaagaacatcatattccaggtggacgacgtgccggtgaggacg 557 Query: 121 ttcaagaagtacgacggcctgccgttcccg-tcggcgcggccgatgacggtgcacgcgac 179 |||||||||||||||| |||||||| |||| | || | |||||||||||||||||| || Sbjct: 558 ttcaagaagtacgacgacctgccgtacccgagcagc-cagccgatgacggtgcacgccac 616 Query: 180 gctgtgggacggcagctactgggcgacgcagcacggcaccgtcaagatccactggcgcca 239 ||| |||||||||||||||||||| || | |||||| |||||||||| ||||| ||| Sbjct: 617 gctctgggacggcagctactgggccacccgccacggcgacgtcaagatcgactggaccca 676 Query: 240 cgaccccttcgtcgtcccctaccagggctaccacgccaacggctgcgtc 288 | |||||||||||| ||||| |||||| | |||||||||||||| Sbjct: 677 ggcgcccttcgtcgtcaactaccgcggctactcctccaacggctgcgtc 725 Score = 56.0 bits (28), Expect = 9e-05 Identities = 85/104 (81%) Strand = Plus / Plus Query: 314 cctgccccgccggcagcgacgcctggatgcaccgcgagctcgacgacggcgagctcagca 373 |||||||||||||||||||||| |||||| || |||||||||| | | ||| ||| Sbjct: 745 cctgccccgccggcagcgacgcgtggatgaacacggagctcgacggcaaggccctcggca 804 Query: 374 ccgtcgcgtgggccgagcgcaactgcctctcctacaactactgc 417 ||||||| ||||||||| |||| | | | |||||| |||||||| Sbjct: 805 ccgtcgcctgggccgagagcaagtacatgtcctacgactactgc 848
>gb|AY589585.1| Triticum aestivum endotransglucosylase/hydrolase XTH1 mRNA, complete cds Length = 958 Score = 272 bits (137), Expect = 8e-70 Identities = 253/289 (87%), Gaps = 2/289 (0%) Strand = Plus / Plus Query: 1 ggcaagaaggagcaccagttctacctctggttcgacccctccgccgacttccacacctac 60 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 438 ggcaagaaggagcaccagttctacctctggttcgaccccaccgccgacttccacacctac 497 Query: 61 aagatcacatggaacccaaagaacatcatattcgaggtggacggcgtgccggtgaggacc 120 |||||| |||||||| ||||||||||||||| ||||||||| |||||||||||||||| Sbjct: 498 aagatcgtctggaaccccaagaacatcatattccaggtggacgacgtgccggtgaggacc 557 Query: 121 ttcaagaagtacgacggcctgccgttcccg-tcggcgcggccgatgacggtgcacgcgac 179 |||||||||||||||| |||||||| |||| | || | ||| |||||||||||||| || Sbjct: 558 ttcaagaagtacgacgacctgccgtacccgagcagc-cagcccatgacggtgcacgccac 616 Query: 180 gctgtgggacggcagctactgggcgacgcagcacggcaccgtcaagatccactggcgcca 239 ||| |||||||||||||||||||| || | |||||| |||||||||| ||||| |||| Sbjct: 617 gctctgggacggcagctactgggccacccgccacggcgacgtcaagatcgactggagcca 676 Query: 240 cgaccccttcgtcgtcccctaccagggctaccacgccaacggctgcgtc 288 | |||||||||||| ||||| |||||| | |||| ||||||||| Sbjct: 677 ggcgcccttcgtcgtcaactaccgcggctactcctccaatggctgcgtc 725 Score = 52.0 bits (26), Expect = 0.001 Identities = 83/102 (81%) Strand = Plus / Plus Query: 316 tgccccgccggcagcgacgcctggatgcaccgcgagctcgacgacggcgagctcagcacc 375 |||||||||||||||||||| |||||| || |||||||||| | | ||| ||||| Sbjct: 747 tgccccgccggcagcgacgcgtggatgaacacagagctcgacggcaaggccctcggcacc 806 Query: 376 gtcgcgtgggccgagcgcaactgcctctcctacaactactgc 417 ||||| ||||||||| |||| | | | |||||| |||||||| Sbjct: 807 gtcgcctgggccgagagcaagtacatgtcctacgactactgc 848
>ref|XM_507172.1| PREDICTED Oryza sativa (japonica cultivar-group), P0682A06.17 mRNA Length = 1127 Score = 252 bits (127), Expect = 8e-64 Identities = 210/235 (89%), Gaps = 2/235 (0%) Strand = Plus / Plus Query: 1 ggcaagaaggagcaccagttctacctctggttcgacccctccgccgacttccacacctac 60 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 437 ggcaagaaggagcaccagttctacctctggttcgaccccaccgccgacttccacacctac 496 Query: 61 aagatcacatggaacccaaagaacatcatattcgaggtggacggcgtgccggtgaggacc 120 ||||||| ||||| || | |||||||||||| ||||||||| ||||||||||||||| Sbjct: 497 aagatcatctggaatccccaaaacatcatattccaggtggacgacgtgccggtgaggacg 556 Query: 121 ttcaagaagtacgacggcctgccgttcccgtcggcgc-ggccgatgacggtgcacgcgac 179 |||||||||||||||| |||| ||| |||| | | || |||||||| | |||||||||| Sbjct: 557 ttcaagaagtacgacgacctggcgtacccg-cagagcaagccgatgaggctgcacgcgac 615 Query: 180 gctgtgggacggcagctactgggcgacgcagcacggcaccgtcaagatccactgg 234 |||||||||||||||||||||||||||| ||||||| |||||||||| ||||| Sbjct: 616 gctgtgggacggcagctactgggcgacgaggcacggcgacgtcaagatcgactgg 670 Score = 105 bits (53), Expect = 1e-19 Identities = 74/81 (91%) Strand = Plus / Plus Query: 337 tggatgcaccgcgagctcgacgacggcgagctcagcaccgtcgcgtgggccgagcgcaac 396 ||||| |||||||||||||||| || ||||||| |||||||||||||||||||||||||| Sbjct: 782 tggatccaccgcgagctcgacggcgccgagctcggcaccgtcgcgtgggccgagcgcaac 841 Query: 397 tgcctctcctacaactactgc 417 | | | ||||||||||||||| Sbjct: 842 tacatgtcctacaactactgc 862
>ref|XM_480868.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1111 Score = 252 bits (127), Expect = 8e-64 Identities = 210/235 (89%), Gaps = 2/235 (0%) Strand = Plus / Plus Query: 1 ggcaagaaggagcaccagttctacctctggttcgacccctccgccgacttccacacctac 60 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 442 ggcaagaaggagcaccagttctacctctggttcgaccccaccgccgacttccacacctac 501 Query: 61 aagatcacatggaacccaaagaacatcatattcgaggtggacggcgtgccggtgaggacc 120 ||||||| ||||| || | |||||||||||| ||||||||| ||||||||||||||| Sbjct: 502 aagatcatctggaatccccaaaacatcatattccaggtggacgacgtgccggtgaggacg 561 Query: 121 ttcaagaagtacgacggcctgccgttcccgtcggcgc-ggccgatgacggtgcacgcgac 179 |||||||||||||||| |||| ||| |||| | | || |||||||| | |||||||||| Sbjct: 562 ttcaagaagtacgacgacctggcgtacccg-cagagcaagccgatgaggctgcacgcgac 620 Query: 180 gctgtgggacggcagctactgggcgacgcagcacggcaccgtcaagatccactgg 234 |||||||||||||||||||||||||||| ||||||| |||||||||| ||||| Sbjct: 621 gctgtgggacggcagctactgggcgacgaggcacggcgacgtcaagatcgactgg 675 Score = 105 bits (53), Expect = 1e-19 Identities = 74/81 (91%) Strand = Plus / Plus Query: 337 tggatgcaccgcgagctcgacgacggcgagctcagcaccgtcgcgtgggccgagcgcaac 396 ||||| |||||||||||||||| || ||||||| |||||||||||||||||||||||||| Sbjct: 787 tggatccaccgcgagctcgacggcgccgagctcggcaccgtcgcgtgggccgagcgcaac 846 Query: 397 tgcctctcctacaactactgc 417 | | | ||||||||||||||| Sbjct: 847 tacatgtcctacaactactgc 867
>dbj|AB110604.1| Oryza sativa (japonica cultivar-group) OsXRT5 mRNA for xyloglucan endotransglycosylase-related protein 5, complete cds Length = 1280 Score = 252 bits (127), Expect = 8e-64 Identities = 210/235 (89%), Gaps = 2/235 (0%) Strand = Plus / Plus Query: 1 ggcaagaaggagcaccagttctacctctggttcgacccctccgccgacttccacacctac 60 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 433 ggcaagaaggagcaccagttctacctctggttcgaccccaccgccgacttccacacctac 492 Query: 61 aagatcacatggaacccaaagaacatcatattcgaggtggacggcgtgccggtgaggacc 120 ||||||| ||||| || | |||||||||||| ||||||||| ||||||||||||||| Sbjct: 493 aagatcatctggaatccccaaaacatcatattccaggtggacgacgtgccggtgaggacg 552 Query: 121 ttcaagaagtacgacggcctgccgttcccgtcggcgc-ggccgatgacggtgcacgcgac 179 |||||||||||||||| |||| ||| |||| | | || |||||||| | |||||||||| Sbjct: 553 ttcaagaagtacgacgacctggcgtacccg-cagagcaagccgatgaggctgcacgcgac 611 Query: 180 gctgtgggacggcagctactgggcgacgcagcacggcaccgtcaagatccactgg 234 |||||||||||||||||||||||||||| ||||||| |||||||||| ||||| Sbjct: 612 gctgtgggacggcagctactgggcgacgaggcacggcgacgtcaagatcgactgg 666 Score = 105 bits (53), Expect = 1e-19 Identities = 74/81 (91%) Strand = Plus / Plus Query: 337 tggatgcaccgcgagctcgacgacggcgagctcagcaccgtcgcgtgggccgagcgcaac 396 ||||| |||||||||||||||| || ||||||| |||||||||||||||||||||||||| Sbjct: 778 tggatccaccgcgagctcgacggcgccgagctcggcaccgtcgcgtgggccgagcgcaac 837 Query: 397 tgcctctcctacaactactgc 417 | | | ||||||||||||||| Sbjct: 838 tacatgtcctacaactactgc 858
>dbj|AK104451.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-F05, full insert sequence Length = 1111 Score = 252 bits (127), Expect = 8e-64 Identities = 210/235 (89%), Gaps = 2/235 (0%) Strand = Plus / Plus Query: 1 ggcaagaaggagcaccagttctacctctggttcgacccctccgccgacttccacacctac 60 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 442 ggcaagaaggagcaccagttctacctctggttcgaccccaccgccgacttccacacctac 501 Query: 61 aagatcacatggaacccaaagaacatcatattcgaggtggacggcgtgccggtgaggacc 120 ||||||| ||||| || | |||||||||||| ||||||||| ||||||||||||||| Sbjct: 502 aagatcatctggaatccccaaaacatcatattccaggtggacgacgtgccggtgaggacg 561 Query: 121 ttcaagaagtacgacggcctgccgttcccgtcggcgc-ggccgatgacggtgcacgcgac 179 |||||||||||||||| |||| ||| |||| | | || |||||||| | |||||||||| Sbjct: 562 ttcaagaagtacgacgacctggcgtacccg-cagagcaagccgatgaggctgcacgcgac 620 Query: 180 gctgtgggacggcagctactgggcgacgcagcacggcaccgtcaagatccactgg 234 |||||||||||||||||||||||||||| ||||||| |||||||||| ||||| Sbjct: 621 gctgtgggacggcagctactgggcgacgaggcacggcgacgtcaagatcgactgg 675 Score = 105 bits (53), Expect = 1e-19 Identities = 74/81 (91%) Strand = Plus / Plus Query: 337 tggatgcaccgcgagctcgacgacggcgagctcagcaccgtcgcgtgggccgagcgcaac 396 ||||| |||||||||||||||| || ||||||| |||||||||||||||||||||||||| Sbjct: 787 tggatccaccgcgagctcgacggcgccgagctcggcaccgtcgcgtgggccgagcgcaac 846 Query: 397 tgcctctcctacaactactgc 417 | | | ||||||||||||||| Sbjct: 847 tacatgtcctacaactactgc 867
>dbj|AK060654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H12, full insert sequence Length = 1127 Score = 252 bits (127), Expect = 8e-64 Identities = 210/235 (89%), Gaps = 2/235 (0%) Strand = Plus / Plus Query: 1 ggcaagaaggagcaccagttctacctctggttcgacccctccgccgacttccacacctac 60 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 437 ggcaagaaggagcaccagttctacctctggttcgaccccaccgccgacttccacacctac 496 Query: 61 aagatcacatggaacccaaagaacatcatattcgaggtggacggcgtgccggtgaggacc 120 ||||||| ||||| || | |||||||||||| ||||||||| ||||||||||||||| Sbjct: 497 aagatcatctggaatccccaaaacatcatattccaggtggacgacgtgccggtgaggacg 556 Query: 121 ttcaagaagtacgacggcctgccgttcccgtcggcgc-ggccgatgacggtgcacgcgac 179 |||||||||||||||| |||| ||| |||| | | || |||||||| | |||||||||| Sbjct: 557 ttcaagaagtacgacgacctggcgtacccg-cagagcaagccgatgaggctgcacgcgac 615 Query: 180 gctgtgggacggcagctactgggcgacgcagcacggcaccgtcaagatccactgg 234 |||||||||||||||||||||||||||| ||||||| |||||||||| ||||| Sbjct: 616 gctgtgggacggcagctactgggcgacgaggcacggcgacgtcaagatcgactgg 670 Score = 105 bits (53), Expect = 1e-19 Identities = 74/81 (91%) Strand = Plus / Plus Query: 337 tggatgcaccgcgagctcgacgacggcgagctcagcaccgtcgcgtgggccgagcgcaac 396 ||||| |||||||||||||||| || ||||||| |||||||||||||||||||||||||| Sbjct: 782 tggatccaccgcgagctcgacggcgccgagctcggcaccgtcgcgtgggccgagcgcaac 841 Query: 397 tgcctctcctacaactactgc 417 | | | ||||||||||||||| Sbjct: 842 tacatgtcctacaactactgc 862
>gb|AY105107.1| Zea mays PCO140468 mRNA sequence Length = 1297 Score = 135 bits (68), Expect = 1e-28 Identities = 173/208 (83%) Strand = Plus / Plus Query: 1 ggcaagaaggagcaccagttctacctctggttcgacccctccgccgacttccacacctac 60 |||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||| Sbjct: 501 ggcaagaaggagcaccagttctacctgtggttcgacccggccgccgacttccacaaatac 560 Query: 61 aagatcacatggaacccaaagaacatcatattcgaggtggacggcgtgccggtgaggacc 120 |||||| |||||| ||||||||||| ||| ||||||||| |||| ||||| | | Sbjct: 561 aagatcgtctggaacgacaagaacatcatcttccaggtggacgacgtgacggtgcgcgtc 620 Query: 121 ttcaagaagtacgacggcctgccgttcccgtcggcgcggccgatgacggtgcacgcgacg 180 |||||| ||||| | |||||||| |||| || ||| ||| |||||||||| ||| Sbjct: 621 ttcaagcgctacgatgacctgccgtacccggacgccaagcccatggcggtgcacgccacg 680 Query: 181 ctgtgggacggcagctactgggcgacgc 208 ||||||||||||||||||||||| |||| Sbjct: 681 ctgtgggacggcagctactgggccacgc 708
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 131 bits (66), Expect = 2e-27 Identities = 128/146 (87%), Gaps = 2/146 (1%) Strand = Plus / Plus Query: 90 attcgaggtggacggcgtgccggtgaggaccttcaagaagtacgacggcctgccgttccc 149 |||| ||||||||| ||||||||||||||| |||||||||||||||| |||| ||| ||| Sbjct: 8322297 attccaggtggacgacgtgccggtgaggacgttcaagaagtacgacgacctggcgtaccc 8322356 Query: 150 gtcggcgcg-gccgatgacggtgcacgcgacgctgtgggacggcagctactgggcgacgc 208 | | | || |||||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 8322357 g-cagagcaagccgatgaggctgcacgcgacgctgtgggacggcagctactgggcgacga 8322415 Query: 209 agcacggcaccgtcaagatccactgg 234 ||||||| |||||||||| ||||| Sbjct: 8322416 ggcacggcgacgtcaagatcgactgg 8322441 Score = 125 bits (63), Expect = 1e-25 Identities = 66/67 (98%) Strand = Plus / Plus Query: 1 ggcaagaaggagcaccagttctacctctggttcgacccctccgccgacttccacacctac 60 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 8322110 ggcaagaaggagcaccagttctacctctggttcgaccccaccgccgacttccacacctac 8322169 Query: 61 aagatca 67 ||||||| Sbjct: 8322170 aagatca 8322176 Score = 105 bits (53), Expect = 1e-19 Identities = 74/81 (91%) Strand = Plus / Plus Query: 337 tggatgcaccgcgagctcgacgacggcgagctcagcaccgtcgcgtgggccgagcgcaac 396 ||||| |||||||||||||||| || ||||||| |||||||||||||||||||||||||| Sbjct: 8322553 tggatccaccgcgagctcgacggcgccgagctcggcaccgtcgcgtgggccgagcgcaac 8322612 Query: 397 tgcctctcctacaactactgc 417 | | | ||||||||||||||| Sbjct: 8322613 tacatgtcctacaactactgc 8322633 Score = 69.9 bits (35), Expect = 6e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 10 gagcaccagttctacctctggttcgacccctccgccgacttccacacctac 60 ||||| |||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 8378907 gagcagcagttccgcctctggttcgaccccaccgccgacttccacacctac 8378857
>dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0682A06 Length = 142023 Score = 131 bits (66), Expect = 2e-27 Identities = 128/146 (87%), Gaps = 2/146 (1%) Strand = Plus / Plus Query: 90 attcgaggtggacggcgtgccggtgaggaccttcaagaagtacgacggcctgccgttccc 149 |||| ||||||||| ||||||||||||||| |||||||||||||||| |||| ||| ||| Sbjct: 62406 attccaggtggacgacgtgccggtgaggacgttcaagaagtacgacgacctggcgtaccc 62465 Query: 150 gtcggcgcg-gccgatgacggtgcacgcgacgctgtgggacggcagctactgggcgacgc 208 | | | || |||||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 62466 g-cagagcaagccgatgaggctgcacgcgacgctgtgggacggcagctactgggcgacga 62524 Query: 209 agcacggcaccgtcaagatccactgg 234 ||||||| |||||||||| ||||| Sbjct: 62525 ggcacggcgacgtcaagatcgactgg 62550 Score = 125 bits (63), Expect = 1e-25 Identities = 66/67 (98%) Strand = Plus / Plus Query: 1 ggcaagaaggagcaccagttctacctctggttcgacccctccgccgacttccacacctac 60 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 62219 ggcaagaaggagcaccagttctacctctggttcgaccccaccgccgacttccacacctac 62278 Query: 61 aagatca 67 ||||||| Sbjct: 62279 aagatca 62285 Score = 105 bits (53), Expect = 1e-19 Identities = 74/81 (91%) Strand = Plus / Plus Query: 337 tggatgcaccgcgagctcgacgacggcgagctcagcaccgtcgcgtgggccgagcgcaac 396 ||||| |||||||||||||||| || ||||||| |||||||||||||||||||||||||| Sbjct: 62662 tggatccaccgcgagctcgacggcgccgagctcggcaccgtcgcgtgggccgagcgcaac 62721 Query: 397 tgcctctcctacaactactgc 417 | | | ||||||||||||||| Sbjct: 62722 tacatgtcctacaactactgc 62742 Score = 69.9 bits (35), Expect = 6e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 10 gagcaccagttctacctctggttcgacccctccgccgacttccacacctac 60 ||||| |||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 119016 gagcagcagttccgcctctggttcgaccccaccgccgacttccacacctac 118966
>gb|BT017812.1| Zea mays clone EL01N0507B07.c mRNA sequence Length = 1156 Score = 127 bits (64), Expect = 3e-26 Identities = 172/208 (82%) Strand = Plus / Plus Query: 1 ggcaagaaggagcaccagttctacctctggttcgacccctccgccgacttccacacctac 60 ||||| |||||||||||||||||||| ||||||||||| ||||||||||||||| ||| Sbjct: 337 ggcaataaggagcaccagttctacctgtggttcgacccggccgccgacttccacaaatac 396 Query: 61 aagatcacatggaacccaaagaacatcatattcgaggtggacggcgtgccggtgaggacc 120 |||||| |||||| ||||||||||| ||| ||||||||| |||| ||||| | | Sbjct: 397 aagatcgtctggaacgacaagaacatcatcttccaggtggacgacgtgacggtgcgcgtc 456 Query: 121 ttcaagaagtacgacggcctgccgttcccgtcggcgcggccgatgacggtgcacgcgacg 180 |||||| ||||| | |||||||| |||| || ||| ||| |||||||||| ||| Sbjct: 457 ttcaagcgctacgatgacctgccgtacccggacgccaagcccatggcggtgcacgccacg 516 Query: 181 ctgtgggacggcagctactgggcgacgc 208 ||||||||||||||||||||||| |||| Sbjct: 517 ctgtgggacggcagctactgggccacgc 544
>emb|AJ875021.1| Zea mays mRNA for xyloglucan endo-transglycosylase/hydrolase (xth1 gene), cultivated variety W64A Length = 1225 Score = 125 bits (63), Expect = 1e-25 Identities = 168/203 (82%) Strand = Plus / Plus Query: 1 ggcaagaaggagcaccagttctacctctggttcgacccctccgccgacttccacacctac 60 ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| Sbjct: 481 ggcaagaaggagcaccagttcgacctctggttcgacccctccgccgactaccacacctac 540 Query: 61 aagatcacatggaacccaaagaacatcatattcgaggtggacggcgtgccggtgaggacc 120 | |||| |||||||| | |||||| | ||| |||||||||||| | | || | Sbjct: 541 accatcatctggaacccgaccaacatcctgttcaaggtggacggcgacgtgatccggtgc 600 Query: 121 ttcaagaagtacgacggcctgccgttcccgtcggcgcggccgatgacggtgcacgcgacg 180 |||||| |||| || |||||||| |||| ||| |||| ||| || ||||||| ||| Sbjct: 601 ttcaagcgctacgccgacctgccgtacccgagcgcgaggcccatggcgctgcacgccacg 660 Query: 181 ctgtgggacggcagctactgggc 203 ||||||||||||||||||||||| Sbjct: 661 ctgtgggacggcagctactgggc 683 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Plus Query: 244 cccttcgtcgtcccctaccagggctaccacgccaacggctgcgtc 288 |||||||||||| |||||| ||||||| |||||||| ||||||| Sbjct: 724 cccttcgtcgtctcctaccggggctactccgccaacgcctgcgtc 768
>gb|AY107002.1| Zea mays PCO111646 mRNA sequence Length = 776 Score = 107 bits (54), Expect = 3e-20 Identities = 93/106 (87%) Strand = Plus / Plus Query: 1 ggcaagaaggagcaccagttctacctctggttcgacccctccgccgacttccacacctac 60 ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| Sbjct: 506 ggcaagaaggagcaccagttcgacctctggttcgacccctccgccgactaccacacctac 565 Query: 61 aagatcacatggaacccaaagaacatcatattcgaggtggacggcg 106 | |||| |||||||| |||||| | ||| |||||||||||| Sbjct: 566 accatcatctggaacccggccaacatcctgttcaaggtggacggcg 611
>gb|AY106744.1| Zea mays PCO111647 mRNA sequence Length = 1267 Score = 105 bits (53), Expect = 1e-19 Identities = 59/61 (96%) Strand = Plus / Plus Query: 1 ggcaagaaggagcaccagttctacctctggttcgacccctccgccgacttccacacctac 60 ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| Sbjct: 477 ggcaagaaggagcaccagttcgacctctggttcgacccctccgccgactaccacacctac 536 Query: 61 a 61 | Sbjct: 537 a 537 Score = 67.9 bits (34), Expect = 2e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 158 ggccgatgacggtgcacgcgacgctgtgggacggcagctactgggc 203 |||| |||||| ||||||| |||||||||||||||||||||||||| Sbjct: 634 ggcccatgacgctgcacgccacgctgtgggacggcagctactgggc 679
>gb|AY106262.1| Zea mays PCO111648 mRNA sequence Length = 1257 Score = 101 bits (51), Expect = 2e-18 Identities = 90/103 (87%) Strand = Plus / Plus Query: 1 ggcaagaaggagcaccagttctacctctggttcgacccctccgccgacttccacacctac 60 |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 520 ggcaagaaggagcaccagttctacctgtggttcgacccggccgccgacttccacacctac 579 Query: 61 aagatcacatggaacccaaagaacatcatattcgaggtggacg 103 | |||| |||||| |||||| |||| ||| ||||||||| Sbjct: 580 accatcatctggaacgacaagaacgtcatcttcaaggtggacg 622 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Plus Query: 167 cggtgcacgcgacgctgtgggacggcagctactgggcgacgcagca 212 |||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 686 cggtgcacgccacgctgtgggacggcagctactgggccacgcagca 731 Score = 48.1 bits (24), Expect = 0.023 Identities = 63/76 (82%) Strand = Plus / Plus Query: 312 ctcctgccccgccggcagcgacgcctggatgcaccgcgagctcgacgacggcgagctcag 371 ||||||||||||||||| |||| ||||||| |||| ||||||||| || |||| | Sbjct: 831 ctcctgccccgccggcaccgaccgctggatgagccgccagctcgacgccgccgagtgggg 890 Query: 372 caccgtcgcgtgggcc 387 ||||||||| |||||| Sbjct: 891 caccgtcgcctgggcc 906
>gb|BT017380.1| Zea mays clone EL01N0326D06.c mRNA sequence Length = 781 Score = 93.7 bits (47), Expect = 4e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 5 agaaggagcaccagttctacctctggttcgacccctccgccgacttccacacctacaaga 64 |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| | Sbjct: 46 agaaggagcaccagttctacctgtggttcgacccggccgccgacttccacacctacacca 105 Query: 65 tcacatggaacccaaagaacatcatattcgaggtggacg 103 ||| |||||| |||||| |||| ||| ||||||||| Sbjct: 106 tcatctggaacgacaagaacgtcatcttcaaggtggacg 144 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Plus Query: 167 cggtgcacgcgacgctgtgggacggcagctactgggcgacgcagca 212 |||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 208 cggtgcacgccacgctgtgggacggcagctactgggccacgcagca 253 Score = 48.1 bits (24), Expect = 0.023 Identities = 63/76 (82%) Strand = Plus / Plus Query: 312 ctcctgccccgccggcagcgacgcctggatgcaccgcgagctcgacgacggcgagctcag 371 ||||||||||||||||| |||| ||||||| |||| ||||||||| || |||| | Sbjct: 353 ctcctgccccgccggcaccgaccgctggatgagccgccagctcgacgccgccgagtgggg 412 Query: 372 caccgtcgcgtgggcc 387 ||||||||| |||||| Sbjct: 413 caccgtcgcctgggcc 428
>ref|XM_473793.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 966 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 9 ggagcaccagttctacctctggttcgacccctccgccgacttccacacctaca 61 |||||| |||||||||||||||||||||||| ||||||||||||||| ||||| Sbjct: 429 ggagcagcagttctacctctggttcgaccccaccgccgacttccacaactaca 481 Score = 40.1 bits (20), Expect = 5.6 Identities = 41/48 (85%) Strand = Plus / Plus Query: 161 cgatgacggtgcacgcgacgctgtgggacggcagctactgggcgacgc 208 |||||| ||||||||||| |||||| ||||| || ||||||||||| Sbjct: 587 cgatgagggtgcacgcgagcctgtggaacggcgacttctgggcgacgc 634
>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08, complete sequence Length = 129037 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Minus Query: 9 ggagcaccagttctacctctggttcgacccctccgccgacttccacacctaca 61 |||||| |||||||||||||||||||||||| ||||||||||||||| ||||| Sbjct: 32621 ggagcagcagttctacctctggttcgaccccaccgccgacttccacaactaca 32569 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 10 gagcaccagttctacctctggttcgacccctccgccgacttccacacctac 60 ||||| |||||| |||||||||||||||| ||||||||| |||||||||| Sbjct: 29252 gagcagcagttccgcctctggttcgaccccaccgccgactaccacacctac 29302 Score = 40.1 bits (20), Expect = 5.6 Identities = 41/48 (85%) Strand = Plus / Minus Query: 161 cgatgacggtgcacgcgacgctgtgggacggcagctactgggcgacgc 208 |||||| ||||||||||| |||||| ||||| || ||||||||||| Sbjct: 30652 cgatgagggtgcacgcgagcctgtggaacggcgacttctgggcgacgc 30605
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Minus Query: 9 ggagcaccagttctacctctggttcgacccctccgccgacttccacacctaca 61 |||||| |||||||||||||||||||||||| ||||||||||||||| ||||| Sbjct: 30556913 ggagcagcagttctacctctggttcgaccccaccgccgacttccacaactaca 30556861 Score = 69.9 bits (35), Expect = 6e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 10 gagcaccagttctacctctggttcgacccctccgccgacttccacacctac 60 ||||| |||||| ||||||||||||||||| || ||||||||||||||||| Sbjct: 30516931 gagcagcagttccacctctggttcgaccccaccaccgacttccacacctac 30516881 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 10 gagcaccagttctacctctggttcgacccctccgccgacttccacacctac 60 ||||| |||||| |||||||||||||||| ||||||||| |||||||||| Sbjct: 30553544 gagcagcagttccgcctctggttcgaccccaccgccgactaccacacctac 30553594 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 23 acctctggttcgacccctccgccgacttccacacctac 60 |||| |||||||||||| |||||||||||||||||||| Sbjct: 32180527 acctgtggttcgaccccaccgccgacttccacacctac 32180564 Score = 58.0 bits (29), Expect = 2e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 349 gagctcgacgacggcgagctcagcaccgtcgcgtgggccgagcgcaactgcctctcctac 408 ||||||||||||| | ||||| |||| ||||| | | |||||||||||| | | |||||| Sbjct: 33677737 gagctcgacgacgccaagctcggcactgtcgcctagcccgagcgcaactacatgtcctac 33677796 Query: 409 aactactgc 417 ||||||||| Sbjct: 33677797 aactactgc 33677805 Score = 40.1 bits (20), Expect = 5.6 Identities = 41/48 (85%) Strand = Plus / Minus Query: 161 cgatgacggtgcacgcgacgctgtgggacggcagctactgggcgacgc 208 |||||| ||||||||||| |||||| ||||| || ||||||||||| Sbjct: 30554944 cgatgagggtgcacgcgagcctgtggaacggcgacttctgggcgacgc 30554897
>dbj|AK059203.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-A11, full insert sequence Length = 1234 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 9 ggagcaccagttctacctctggttcgacccctccgccgacttccacacctaca 61 |||||| |||||||||||||||||||||||| ||||||||||||||| ||||| Sbjct: 497 ggagcagcagttctacctctggttcgaccccaccgccgacttccacaactaca 549 Score = 40.1 bits (20), Expect = 5.6 Identities = 41/48 (85%) Strand = Plus / Plus Query: 161 cgatgacggtgcacgcgacgctgtgggacggcagctactgggcgacgc 208 |||||| ||||||||||| |||||| ||||| || ||||||||||| Sbjct: 655 cgatgagggtgcacgcgagcctgtggaacggcgacttctgggcgacgc 702
>ref|XM_480875.1| Oryza sativa (japonica cultivar-group), mRNA Length = 906 Score = 75.8 bits (38), Expect = 1e-10 Identities = 86/102 (84%) Strand = Plus / Plus Query: 10 gagcaccagttctacctctggttcgacccctccgccgacttccacacctacaagatcaca 69 ||||| |||||| |||||||||||||||| |||||||||||||||||||| ||| Sbjct: 439 gagcagcagttccgcctctggttcgaccccaccgccgacttccacacctactccatcgtc 498 Query: 70 tggaacccaaagaacatcatattcgaggtggacggcgtgccg 111 |||||||| ||| |||||||| | |||||||||||||||| Sbjct: 499 tggaaccccaagcacatcataattctggtggacggcgtgccg 540
>gb|BT019084.1| Zea mays clone Contig673.F mRNA sequence Length = 977 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 9 ggagcaccagttctacctctggttcgacccctccgccgacttccacacctac 60 |||||| |||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 706 ggagcagcagttccgcctctggttcgaccccaccgccgacttccacacctac 655
>gb|AY106776.1| Zea mays PCO076978 mRNA sequence Length = 974 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 9 ggagcaccagttctacctctggttcgacccctccgccgacttccacacctac 60 |||||| |||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 498 ggagcagcagttccgcctctggttcgaccccaccgccgacttccacacctac 549
>gb|AY103775.1| Zea mays PCO076979 mRNA sequence Length = 1495 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 9 ggagcaccagttctacctctggttcgacccctccgccgacttccacacctac 60 |||||| |||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 527 ggagcagcagttccgcctctggttcgaccccaccgccgacttccacacctac 578
>ref|XM_473788.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 822 Score = 69.9 bits (35), Expect = 6e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 10 gagcaccagttctacctctggttcgacccctccgccgacttccacacctac 60 ||||| |||||| ||||||||||||||||| || ||||||||||||||||| Sbjct: 385 gagcagcagttccacctctggttcgaccccaccaccgacttccacacctac 435
>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02, complete sequence Length = 166804 Score = 69.9 bits (35), Expect = 6e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 10 gagcaccagttctacctctggttcgacccctccgccgacttccacacctac 60 ||||| |||||| ||||||||||||||||| || ||||||||||||||||| Sbjct: 150308 gagcagcagttccacctctggttcgaccccaccaccgacttccacacctac 150258
>gb|AF443603.1|AF443603 Oryza sativa xyloglucan endotransglycosylase mRNA, complete cds Length = 1162 Score = 69.9 bits (35), Expect = 6e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 10 gagcaccagttctacctctggttcgacccctccgccgacttccacacctac 60 ||||| |||||| ||||||||||||||||| || ||||||||||||||||| Sbjct: 457 gagcagcagttccacctctggttcgaccccaccaccgacttccacacctac 507
>dbj|AK070734.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062B10, full insert sequence Length = 1109 Score = 69.9 bits (35), Expect = 6e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 10 gagcaccagttctacctctggttcgacccctccgccgacttccacacctac 60 ||||| |||||| ||||||||||||||||| || ||||||||||||||||| Sbjct: 475 gagcagcagttccacctctggttcgaccccaccaccgacttccacacctac 525
>gb|BT017470.1| Zea mays clone EL01N0408C10.c mRNA sequence Length = 878 Score = 63.9 bits (32), Expect = 4e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 25 ctctggttcgacccctccgccgacttccacacctac 60 ||||||||||||||| |||||||||||||||||||| Sbjct: 262 ctctggttcgaccccaccgccgacttccacacctac 297
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 63.9 bits (32), Expect = 4e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 25 ctctggttcgacccctccgccgacttccacacctac 60 ||||||||||||||| |||||||||||||||||||| Sbjct: 28754822 ctctggttcgaccccaccgccgacttccacacctac 28754857 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 24 cctctggttcgacccctccgccgacttcca 53 |||||||||||||||| | ||||||||||| Sbjct: 7156118 cctctggttcgaccccgctgccgacttcca 7156089
>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0028E05 Length = 157631 Score = 63.9 bits (32), Expect = 4e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 25 ctctggttcgacccctccgccgacttccacacctac 60 ||||||||||||||| |||||||||||||||||||| Sbjct: 62597 ctctggttcgaccccaccgccgacttccacacctac 62632
>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0622F03 Length = 170064 Score = 63.9 bits (32), Expect = 4e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 25 ctctggttcgacccctccgccgacttccacacctac 60 ||||||||||||||| |||||||||||||||||||| Sbjct: 155388 ctctggttcgaccccaccgccgacttccacacctac 155423
>ref|XM_473792.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 570 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 10 gagcaccagttctacctctggttcgacccctccgccgacttccacacctac 60 ||||| |||||| |||||||||||||||| ||||||||| |||||||||| Sbjct: 418 gagcagcagttccgcctctggttcgaccccaccgccgactaccacacctac 468
>ref|XM_468468.1| Oryza sativa (japonica cultivar-group), mRNA Length = 984 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 17 agttctacctctggttcgacccctccgccgacttccac 54 ||||| ||||||||||||||||| |||||||||||||| Sbjct: 497 agttccacctctggttcgaccccaccgccgacttccac 534
>emb|AL606650.5|OSJN00097 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015D13, complete sequence Length = 127135 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 23 acctctggttcgacccctccgccgacttccacacctac 60 |||| |||||||||||| |||||||||||||||||||| Sbjct: 76216 acctgtggttcgaccccaccgccgacttccacacctac 76253
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 17 agttctacctctggttcgacccctccgccgacttccac 54 ||||| ||||||||||||||||| |||||||||||||| Sbjct: 35396754 agttccacctctggttcgaccccaccgccgacttccac 35396717
>dbj|AP003989.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1063_D06 Length = 102439 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 17 agttctacctctggttcgacccctccgccgacttccac 54 ||||| ||||||||||||||||| |||||||||||||| Sbjct: 8275 agttccacctctggttcgaccccaccgccgacttccac 8238
>dbj|AP004026.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C04 Length = 103194 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 17 agttctacctctggttcgacccctccgccgacttccac 54 ||||| ||||||||||||||||| |||||||||||||| Sbjct: 57302 agttccacctctggttcgaccccaccgccgacttccac 57265
>dbj|AK099331.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024P08, full insert sequence Length = 1199 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 23 acctctggttcgacccctccgccgacttccacacctac 60 |||| |||||||||||| |||||||||||||||||||| Sbjct: 438 acctgtggttcgaccccaccgccgacttccacacctac 475
>dbj|AK059277.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-C07, full insert sequence Length = 1279 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 23 acctctggttcgacccctccgccgacttccacacctac 60 |||| |||||||||||| |||||||||||||||||||| Sbjct: 442 acctgtggttcgaccccaccgccgacttccacacctac 479
>emb|AL732336.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0105C05, complete sequence Length = 62215 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 23 acctctggttcgacccctccgccgacttccacacctac 60 |||| |||||||||||| |||||||||||||||||||| Sbjct: 31703 acctgtggttcgaccccaccgccgacttccacacctac 31740
>ref|NM_187656.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 783 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 18 gttctacctctggttcgacccctccgccgacttccac 54 |||| ||||||||||||||||| |||||||||||||| Sbjct: 348 gttccacctctggttcgaccccaccgccgacttccac 384
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 18 gttctacctctggttcgacccctccgccgacttccac 54 |||| ||||||||||||||||| |||||||||||||| Sbjct: 471775 gttccacctctggttcgaccccaccgccgacttccac 471739
>emb|AL662953.3|OSJN00153 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011F23, complete sequence Length = 149353 Score = 58.0 bits (29), Expect = 2e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 349 gagctcgacgacggcgagctcagcaccgtcgcgtgggccgagcgcaactgcctctcctac 408 ||||||||||||| | ||||| |||| ||||| | | |||||||||||| | | |||||| Sbjct: 108797 gagctcgacgacgccaagctcggcactgtcgcctagcccgagcgcaactacatgtcctac 108856 Query: 409 aactactgc 417 ||||||||| Sbjct: 108857 aactactgc 108865
>emb|AL606608.3|OSJN00056 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0015K02, complete sequence Length = 153623 Score = 58.0 bits (29), Expect = 2e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 349 gagctcgacgacggcgagctcagcaccgtcgcgtgggccgagcgcaactgcctctcctac 408 ||||||||||||| | ||||| |||| ||||| | | |||||||||||| | | |||||| Sbjct: 28180 gagctcgacgacgccaagctcggcactgtcgcctagcccgagcgcaactacatgtcctac 28239 Query: 409 aactactgc 417 ||||||||| Sbjct: 28240 aactactgc 28248
>gb|AF480497.1| Oryza sativa clone BAC 24K23, complete sequence Length = 181577 Score = 58.0 bits (29), Expect = 2e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 349 gagctcgacgacggcgagctcagcaccgtcgcgtgggccgagcgcaactgcctctcctac 408 ||||||||||||| | ||||| |||| ||||| | | |||||||||||| | | |||||| Sbjct: 108915 gagctcgacgacgccaagctcggcactgtcgcctagcccgagcgcaactacatgtcctac 108974 Query: 409 aactactgc 417 ||||||||| Sbjct: 108975 aactactgc 108983
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 18 gttctacctctggttcgacccctccgccgacttccac 54 |||| ||||||||||||||||| |||||||||||||| Sbjct: 471773 gttccacctctggttcgaccccaccgccgacttccac 471737
>dbj|AK119538.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-C03, full insert sequence Length = 1281 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 18 gttctacctctggttcgacccctccgccgacttccac 54 |||| ||||||||||||||||| |||||||||||||| Sbjct: 668 gttccacctctggttcgaccccaccgccgacttccac 704
>dbj|AK104060.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-G01, full insert sequence Length = 1186 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 18 gttctacctctggttcgacccctccgccgacttccac 54 |||| ||||||||||||||||| |||||||||||||| Sbjct: 573 gttccacctctggttcgaccccaccgccgacttccac 609
>dbj|AK061126.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-G12, full insert sequence Length = 1193 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 18 gttctacctctggttcgacccctccgccgacttccac 54 |||| ||||||||||||||||| |||||||||||||| Sbjct: 580 gttccacctctggttcgaccccaccgccgacttccac 616
>gb|AC113930.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1384D03, complete sequence Length = 116214 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 18 gttctacctctggttcgacccctccgccgacttccac 54 |||| ||||||||||||||||| |||||||||||||| Sbjct: 70235 gttccacctctggttcgaccccaccgccgacttccac 70199
>ref|NM_187323.1| Oryza sativa (japonica cultivar-group), mRNA Length = 906 Score = 56.0 bits (28), Expect = 9e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 23 acctctggttcgacccctccgccgacttccac 54 ||||||||||||||||| |||||||||||||| Sbjct: 482 acctctggttcgaccccaccgccgacttccac 513
>emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEA) Length = 1174 Score = 56.0 bits (28), Expect = 9e-05 Identities = 97/120 (80%) Strand = Plus / Plus Query: 9 ggagcaccagttctacctctggttcgacccctccgccgacttccacacctacaagatcac 68 |||||| |||||| |||||||||||| ||| || |||||||||||||||| ||| Sbjct: 423 ggagcaacagttccgcctctggttcgatcccaccaacgacttccacacctactccatcct 482 Query: 69 atggaacccaaagaacatcatattcgaggtggacggcgtgccggtgaggaccttcaagaa 128 |||||||||||| ||||||| ||| |||||||| | ||||| | ||| ||||||||| Sbjct: 483 ctggaacccaaagcacatcatcttcatggtggacgacatgccgatcagggacttcaagaa 542
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 56.0 bits (28), Expect = 9e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 23 acctctggttcgacccctccgccgacttccac 54 ||||||||||||||||| |||||||||||||| Sbjct: 17438397 acctctggttcgaccccaccgccgacttccac 17438428 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 28 tggttcgacccctccgccgacttccacacctac 60 |||||||||||| |||||||||||||| ||||| Sbjct: 20676569 tggttcgaccccaccgccgacttccactcctac 20676601 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 agctcgacgacggcgagctc 369 |||||||||||||||||||| Sbjct: 21649002 agctcgacgacggcgagctc 21648983
>dbj|AP004299.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0434A03 Length = 146505 Score = 56.0 bits (28), Expect = 9e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 23 acctctggttcgacccctccgccgacttccac 54 ||||||||||||||||| |||||||||||||| Sbjct: 106621 acctctggttcgaccccaccgccgacttccac 106652
>ref|XM_478514.1| Oryza sativa (japonica cultivar-group), mRNA Length = 930 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 28 tggttcgacccctccgccgacttccacacctac 60 |||||||||||| |||||||||||||| ||||| Sbjct: 454 tggttcgaccccaccgccgacttccactcctac 486
>ref|XM_478515.1| Oryza sativa (japonica cultivar-group), mRNA Length = 657 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 28 tggttcgacccctccgccgacttccacacctac 60 |||||||||||| |||||||||||||| ||||| Sbjct: 546 tggttcgaccccaccgccgacttccactcctac 578
>emb|X93175.1|HVXETXEB H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEB) Length = 1226 Score = 50.1 bits (25), Expect = 0.006 Identities = 79/97 (81%) Strand = Plus / Plus Query: 9 ggagcaccagttctacctctggttcgacccctccgccgacttccacacctacaagatcac 68 |||||| |||||| |||||||||||||||| || | ||||||||||||| |||| Sbjct: 484 ggagcagcagttccgcctctggttcgaccccaccaaggccttccacacctactccatcat 543 Query: 69 atggaacccaaagaacatcatattcgaggtggacggc 105 |||||||| || || ||||||||| |||||||||| Sbjct: 544 ctggaacccgcagcacgtcatattcgcggtggacggc 580
>gb|AY589589.1| Triticum aestivum endotransglucosylase/hydrolase XTH5 mRNA, complete cds Length = 1056 Score = 50.1 bits (25), Expect = 0.006 Identities = 79/97 (81%) Strand = Plus / Plus Query: 9 ggagcaccagttctacctctggttcgacccctccgccgacttccacacctacaagatcac 68 |||||| |||||| |||||||||||||||| || | ||||||||||||| |||| Sbjct: 378 ggagcagcagttccgcctctggttcgaccccaccaaggccttccacacctactccatcat 437 Query: 69 atggaacccaaagaacatcatattcgaggtggacggc 105 |||||||| || || ||||||||| |||||||||| Sbjct: 438 ctggaacccgcagcacgtcatattcgcggtggacggc 474
>dbj|AP004674.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0681F05 Length = 144741 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 28 tggttcgacccctccgccgacttccacacctac 60 |||||||||||| |||||||||||||| ||||| Sbjct: 29319 tggttcgaccccaccgccgacttccactcctac 29351
>dbj|AK111340.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-F07, full insert sequence Length = 658 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 28 tggttcgacccctccgccgacttccacacctac 60 |||||||||||| |||||||||||||| ||||| Sbjct: 546 tggttcgaccccaccgccgacttccactcctac 578
>dbj|AK073731.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033064P12, full insert sequence Length = 1707 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 28 tggttcgacccctccgccgacttccacacctac 60 |||||||||||| |||||||||||||| ||||| Sbjct: 640 tggttcgaccccaccgccgacttccactcctac 672
>ref|NM_197613.1| Oryza sativa (japonica cultivar-group) putative cellulase (OSJNBa0001O14.5), mRNA Length = 969 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Plus Query: 23 acctctggttcgacccctccgccgacttccac 54 ||||||||||||||||| |||||| ||||||| Sbjct: 539 acctctggttcgaccccaccgccggcttccac 570
>gb|AC025783.10| Oryza sativa chromosome 10 BAC OSJNBa0001O14 genomic sequence, complete sequence Length = 178022 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Plus Query: 23 acctctggttcgacccctccgccgacttccac 54 ||||||||||||||||| |||||| ||||||| Sbjct: 64150 acctctggttcgaccccaccgccggcttccac 64181
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Plus Query: 23 acctctggttcgacccctccgccgacttccac 54 ||||||||||||||||| |||||| ||||||| Sbjct: 20801751 acctctggttcgaccccaccgccggcttccac 20801782
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Plus Query: 23 acctctggttcgacccctccgccgacttccac 54 ||||||||||||||||| |||||| ||||||| Sbjct: 20813015 acctctggttcgaccccaccgccggcttccac 20813046
>gb|BT014685.1| Oryza sativa AK104912 mRNA sequence Length = 807 Score = 46.1 bits (23), Expect = 0.091 Identities = 77/95 (81%) Strand = Plus / Plus Query: 10 gagcaccagttctacctctggttcgacccctccgccgacttccacacctacaagatcaca 69 ||||| |||||| |||||||||||||||| || ||||||||||||| |||| Sbjct: 373 gagcagcagttccgcctctggttcgaccccacccagtccttccacacctactccatcatc 432 Query: 70 tggaacccaaagaacatcatattcgaggtggacgg 104 ||||||||| || || ||||||||| ||||||||| Sbjct: 433 tggaacccacagcacgtcatattcgcggtggacgg 467
>gb|AY043237.1| Vitis vinifera putative xyloglucan endotransglycosylase XET1 mRNA, partial cds Length = 451 Score = 46.1 bits (23), Expect = 0.091 Identities = 29/31 (93%) Strand = Plus / Plus Query: 9 ggagcaccagttctacctctggttcgacccc 39 |||||| || ||||||||||||||||||||| Sbjct: 70 ggagcaacaattctacctctggttcgacccc 100
>dbj|AB197670.1| Cryptomeria japonica mRNA for pollen major allergen No.121 isoform 1, complete cds Length = 1155 Score = 46.1 bits (23), Expect = 0.091 Identities = 41/47 (87%) Strand = Plus / Plus Query: 10 gagcaccagttctacctctggttcgacccctccgccgacttccacac 56 ||||| || ||||||||||||||||| ||| | || ||||||||||| Sbjct: 521 gagcagcaattctacctctggttcgatcccactgcagacttccacac 567
>dbj|AK104912.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C02, full insert sequence Length = 1208 Score = 46.1 bits (23), Expect = 0.091 Identities = 77/95 (81%) Strand = Plus / Plus Query: 10 gagcaccagttctacctctggttcgacccctccgccgacttccacacctacaagatcaca 69 ||||| |||||| |||||||||||||||| || ||||||||||||| |||| Sbjct: 481 gagcagcagttccgcctctggttcgaccccacccagtccttccacacctactccatcatc 540 Query: 70 tggaacccaaagaacatcatattcgaggtggacgg 104 ||||||||| || || ||||||||| ||||||||| Sbjct: 541 tggaacccacagcacgtcatattcgcggtggacgg 575
>dbj|AK066125.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059H08, full insert sequence Length = 1208 Score = 46.1 bits (23), Expect = 0.091 Identities = 77/95 (81%) Strand = Plus / Plus Query: 10 gagcaccagttctacctctggttcgacccctccgccgacttccacacctacaagatcaca 69 ||||| |||||| |||||||||||||||| || ||||||||||||| |||| Sbjct: 481 gagcagcagttccgcctctggttcgaccccacccagtccttccacacctactccatcatc 540 Query: 70 tggaacccaaagaacatcatattcgaggtggacgg 104 ||||||||| || || ||||||||| ||||||||| Sbjct: 541 tggaacccacagcacgtcatattcgcggtggacgg 575
>gb|L22162.1|SOYMER5HOM Glycine max brassinosteroid-regulated protein mRNA, complete cds Length = 1063 Score = 46.1 bits (23), Expect = 0.091 Identities = 29/31 (93%) Strand = Plus / Plus Query: 9 ggagcaccagttctacctctggttcgacccc 39 |||||| |||||||| ||||||||||||||| Sbjct: 428 ggagcaacagttctatctctggttcgacccc 458
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 343 caccgcgagctcgacgacggcg 364 |||||||||||||||||||||| Sbjct: 2315338 caccgcgagctcgacgacggcg 2315359
>emb|BX842578.1| Mycobacterium tuberculosis H37Rv complete genome; segment 7/13 Length = 346186 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 343 caccgcgagctcgacgacggcg 364 |||||||||||||||||||||| Sbjct: 234302 caccgcgagctcgacgacggcg 234323
>emb|BX248341.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 8/14 Length = 306050 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 343 caccgcgagctcgacgacggcg 364 |||||||||||||||||||||| Sbjct: 91918 caccgcgagctcgacgacggcg 91939
>dbj|AP001204.1| Rhodococcus equi plasmid pREAT701 DNA, complete sequence Length = 80610 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 367 ctcagcaccgtcgcgtgggccg 388 |||||||||||||||||||||| Sbjct: 72522 ctcagcaccgtcgcgtgggccg 72543
>gb|AF116907.2|AF116907 Rhodococcus equi virulence plasmid, complete sequence Length = 80609 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 367 ctcagcaccgtcgcgtgggccg 388 |||||||||||||||||||||| Sbjct: 72521 ctcagcaccgtcgcgtgggccg 72542
>dbj|AP004995.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0068B06 Length = 143712 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 24 cctctggttcgacccctccgccgacttcca 53 |||||||||||||||| | ||||||||||| Sbjct: 33529 cctctggttcgaccccgctgccgacttcca 33500
>gb|AY103552.1| Zea mays PCO075057 mRNA sequence Length = 1380 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Plus Query: 23 acctctggttcgacccctccgccgacttccacac 56 |||| |||||||||||| | |||||||||||||| Sbjct: 497 acctgtggttcgaccccacggccgacttccacac 530
>gb|AF153720.1|AF153720 Onchocerca volvulus calcium-binding protein CBP-1 (cbp-1) mRNA, complete cds Length = 1683 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 59 acaagatcacatggaacccaaagaa 83 ||||||| ||||||||||||||||| Sbjct: 1214 acaagatgacatggaacccaaagaa 1238
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 320 ccgccggcagcgacgcctgga 340 ||||||||||||||||||||| Sbjct: 5450065 ccgccggcagcgacgcctgga 5450085
>ref|NM_185720.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1464 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 agctcgacgacggcgagctc 369 |||||||||||||||||||| Sbjct: 962 agctcgacgacggcgagctc 943
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 341 tgcaccgcgagctcgacgacggcg 364 ||||||||||||||| |||||||| Sbjct: 2565189 tgcaccgcgagctcgccgacggcg 2565212
>gb|AY207496.1| Chlamydomonas reinhardtii CR051 protein gene, complete cds Length = 6868 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 cgccggcagcgacgcctgga 340 |||||||||||||||||||| Sbjct: 2502 cgccggcagcgacgcctgga 2483
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 tctacctctggttcgacccc 39 |||||||||||||||||||| Sbjct: 113577 tctacctctggttcgacccc 113596
>gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007D07, complete sequence Length = 133930 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 tctacctctggttcgacccc 39 |||||||||||||||||||| Sbjct: 13196 tctacctctggttcgacccc 13215
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 cccgccggcagcgacgcctg 338 |||||||||||||||||||| Sbjct: 178937 cccgccggcagcgacgcctg 178918
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 341 tgcaccgcgagctcgacgacggcg 364 ||||||||||||||| |||||||| Sbjct: 1817035 tgcaccgcgagctcgccgacggcg 1817012
>gb|DQ100337.1| Eucalyptus globulus putative xyloglucan endotransglycosylase/hydrolase (XTH1) mRNA, partial cds Length = 746 Score = 40.1 bits (20), Expect = 5.6 Identities = 41/48 (85%) Strand = Plus / Plus Query: 9 ggagcaccagttctacctctggttcgacccctccgccgacttccacac 56 |||||| || ||||| |||||||||||||| | ||||| |||||||| Sbjct: 87 ggagcagcaattctatctctggttcgacccgacagccgatttccacac 134
>gb|AC147484.21| Medicago truncatula clone mth2-52b4, complete sequence Length = 119559 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 ttctacctctggttcgaccc 38 |||||||||||||||||||| Sbjct: 109353 ttctacctctggttcgaccc 109372 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 ttctacctctggttcgaccc 38 |||||||||||||||||||| Sbjct: 105134 ttctacctctggttcgaccc 105153
>gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, complete sequence Length = 168794 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 cgccggcagcgacgcctgga 340 |||||||||||||||||||| Sbjct: 99250 cgccggcagcgacgcctgga 99269
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 tctacctctggttcgacccc 39 |||||||||||||||||||| Sbjct: 19010379 tctacctctggttcgacccc 19010398
>dbj|AB196976.1| Sagittaria pygmaea SpXTH3 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1273 Score = 40.1 bits (20), Expect = 5.6 Identities = 44/52 (84%) Strand = Plus / Plus Query: 9 ggagcaccagttctacctctggttcgacccctccgccgacttccacacctac 60 |||||| |||||| ||| |||||||||||| || ||||||||||||||| Sbjct: 541 ggagcagcagttccgcctgtggttcgaccccaccaaggacttccacacctac 592
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 33 cgacccctccgccgacttccacacctac 60 |||| ||||||||||||||| ||||||| Sbjct: 5752562 cgacgcctccgccgacttcctcacctac 5752589
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 346 cgcgagctcgacgacggcgagctc 369 ||||||||||||||||| |||||| Sbjct: 1255214 cgcgagctcgacgacggagagctc 1255237
>dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F01, full insert sequence Length = 1253 Score = 40.1 bits (20), Expect = 5.6 Identities = 65/80 (81%) Strand = Plus / Plus Query: 24 cctctggttcgacccctccgccgacttccacacctacaagatcacatggaacccaaagaa 83 |||||||| ||||||| || ||||||||||||||| ||| |||||||| ||| | Sbjct: 502 cctctggtacgaccccaccaaggacttccacacctactccatcctctggaaccccaagca 561 Query: 84 catcatattcgaggtggacg 103 |||||||||| |||||||| Sbjct: 562 catcatattcatggtggacg 581
>dbj|AK071574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105D14, full insert sequence Length = 977 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 tctacctctggttcgacccc 39 |||||||||||||||||||| Sbjct: 446 tctacctctggttcgacccc 465
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 cggcgcggccgatgacggtg 171 |||||||||||||||||||| Sbjct: 2033045 cggcgcggccgatgacggtg 2033064
>dbj|AK061093.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-A02, full insert sequence Length = 1053 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 tctacctctggttcgacccc 39 |||||||||||||||||||| Sbjct: 443 tctacctctggttcgacccc 462
>dbj|AP003960.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1612_A04 Length = 124833 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 agctcgacgacggcgagctc 369 |||||||||||||||||||| Sbjct: 79458 agctcgacgacggcgagctc 79439
>gb|AY104207.1| Zea mays PCO111099 mRNA sequence Length = 1202 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 tctacctctggttcgacccc 39 |||||||||||||||||||| Sbjct: 466 tctacctctggttcgacccc 485
>gb|AY103891.1| Zea mays PCO065722 mRNA sequence Length = 1280 Score = 40.1 bits (20), Expect = 5.6 Identities = 44/52 (84%) Strand = Plus / Plus Query: 9 ggagcaccagttctacctctggttcgacccctccgccgacttccacacctac 60 |||||| |||||| ||||||||||||||| || | | ||||||||||||| Sbjct: 509 ggagcagcagttccgcctctggttcgaccctaccactgccttccacacctac 560
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 cgcgagctcgacgacggcga 365 |||||||||||||||||||| Sbjct: 899331 cgcgagctcgacgacggcga 899350
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 cgtcggcgcggccgatgacg 168 |||||||||||||||||||| Sbjct: 2652367 cgtcggcgcggccgatgacg 2652386
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 tctacctctggttcgacccc 39 |||||||||||||||||||| Sbjct: 19169028 tctacctctggttcgacccc 19169047 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,451,997 Number of Sequences: 3902068 Number of extensions: 2451997 Number of successful extensions: 50557 Number of sequences better than 10.0: 110 Number of HSP's better than 10.0 without gapping: 109 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 48909 Number of HSP's gapped (non-prelim): 1642 length of query: 417 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 395 effective length of database: 17,147,199,772 effective search space: 6773143909940 effective search space used: 6773143909940 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
