ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd26l03 |
|---|---|
| Clone Library Name | barley_pub |
>SPS1_CRAPL (O04932) Sucrose-phosphate synthase 1 (EC 2.4.1.14)| (UDP-glucose-fructose-phosphate glucosyltransferase 1) Length = 1054 Score = 253 bits (645), Expect = 3e-67 Identities = 121/183 (66%), Positives = 139/183 (75%) Frame = +1 Query: 7 EMLVSTTFKNSKQEKGENSGGYIIRIPFGPRDMYLTKERLWPFIQEFVDGALSHIVRMSK 186 EML +N E GE+SG YI+RIPFGP+D Y+ KE LWP I EFVDGAL HI++MSK Sbjct: 234 EMLPPRNSENMMDEMGESSGSYIVRIPFGPKDKYVAKELLWPHIPEFVDGALGHIIQMSK 293 Query: 187 TIGEEIGCGHPVWPAVIHGHYXXXXXXXXXXXXXXNLPMAFTGHFLGKDKLEGLLKQGRQ 366 +GE+IG GHP+WPA IHGHY N+PM FTGH LG+DKLE LL+QGR Sbjct: 294 VLGEQIGNGHPIWPAAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLRQGRL 353 Query: 367 SREEINMTYKIMRRIEAEELSLDASEIVIASTRQEIEEQWNLYDGFEVILARKLRARVKR 546 SR+EIN TYKIMRRIEAEELSLDASE+VI STRQEIEEQW LYDGF+ IL RKLRAR+KR Sbjct: 354 SRDEINSTYKIMRRIEAEELSLDASEMVITSTRQEIEEQWRLYDGFDPILERKLRARIKR 413 Query: 547 GAN 555 + Sbjct: 414 NVS 416
>SPS_SPIOL (P31928) Sucrose-phosphate synthase (EC 2.4.1.14)| (UDP-glucose-fructose-phosphate glucosyltransferase) Length = 1056 Score = 249 bits (636), Expect = 4e-66 Identities = 120/183 (65%), Positives = 142/183 (77%) Frame = +1 Query: 7 EMLVSTTFKNSKQEKGENSGGYIIRIPFGPRDMYLTKERLWPFIQEFVDGALSHIVRMSK 186 EML S +NS ++ GE+SG YIIRIPFGP+D Y+ KE LWP+I EFVDGALSHI +MSK Sbjct: 242 EMLSSRNSENSTEQLGESSGAYIIRIPFGPKDKYVAKELLWPYIPEFVDGALSHIKQMSK 301 Query: 187 TIGEEIGCGHPVWPAVIHGHYXXXXXXXXXXXXXXNLPMAFTGHFLGKDKLEGLLKQGRQ 366 +GE+IG G PVWPA +HGHY N+PM FTGH LG+DKL+ LLKQGR Sbjct: 302 VLGEQIGGGLPVWPASVHGHYADAGDSAALLSGALNVPMVFTGHSLGRDKLDQLLKQGRL 361 Query: 367 SREEINMTYKIMRRIEAEELSLDASEIVIASTRQEIEEQWNLYDGFEVILARKLRARVKR 546 SREE++ TYKIMRRIEAEEL LDASEIVI STRQEIEEQW LY GF+++L RKLRAR++R Sbjct: 362 SREEVDATYKIMRRIEAEELCLDASEIVITSTRQEIEEQWQLYHGFDLVLERKLRARMRR 421 Query: 547 GAN 555 G + Sbjct: 422 GVS 424
>SPS_BETVU (P49031) Sucrose-phosphate synthase (EC 2.4.1.14)| (UDP-glucose-fructose-phosphate glucosyltransferase) Length = 1045 Score = 248 bits (632), Expect = 1e-65 Identities = 118/179 (65%), Positives = 137/179 (76%) Frame = +1 Query: 19 STTFKNSKQEKGENSGGYIIRIPFGPRDMYLTKERLWPFIQEFVDGALSHIVRMSKTIGE 198 S F + E GE+SG YI+RIPFGPRD Y+ KE LWP+I EFVDGAL+HIV+MSK +GE Sbjct: 236 SNGFDDDDDEMGESSGAYIVRIPFGPRDKYIAKEELWPYIPEFVDGALNHIVQMSKVLGE 295 Query: 199 EIGCGHPVWPAVIHGHYXXXXXXXXXXXXXXNLPMAFTGHFLGKDKLEGLLKQGRQSREE 378 +IG G VWP IHGHY N+PM TGH LG+DKLE LLKQGR S+++ Sbjct: 296 QIGSGETVWPVAIHGHYADAGDSAALLSGGLNVPMLLTGHSLGRDKLEQLLKQGRMSKDD 355 Query: 379 INMTYKIMRRIEAEELSLDASEIVIASTRQEIEEQWNLYDGFEVILARKLRARVKRGAN 555 IN TYKIMRRIEAEELSLDASEIVI STRQEIEEQW+LYDGF+ +L RKLRAR+KRG + Sbjct: 356 INNTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWHLYDGFDPVLERKLRARMKRGVS 414
>SPS_SOLTU (Q43845) Sucrose-phosphate synthase (EC 2.4.1.14)| (UDP-glucose-fructose-phosphate glucosyltransferase) Length = 1053 Score = 246 bits (627), Expect = 4e-65 Identities = 115/170 (67%), Positives = 136/170 (80%) Frame = +1 Query: 46 EKGENSGGYIIRIPFGPRDMYLTKERLWPFIQEFVDGALSHIVRMSKTIGEEIGCGHPVW 225 E GE+SG YIIRIPFGPR+ Y+ KE+LWP+I EFVDGAL+HI++MSK +GE+IG G+PVW Sbjct: 246 EMGESSGAYIIRIPFGPREKYIPKEQLWPYIPEFVDGALNHIIQMSKVLGEQIGSGYPVW 305 Query: 226 PAVIHGHYXXXXXXXXXXXXXXNLPMAFTGHFLGKDKLEGLLKQGRQSREEINMTYKIMR 405 P IHGHY N+PM FTGH LG+DKLE LL QGR+S++EIN TYKIMR Sbjct: 306 PVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLAQGRKSKDEINSTYKIMR 365 Query: 406 RIEAEELSLDASEIVIASTRQEIEEQWNLYDGFEVILARKLRARVKRGAN 555 RIEAEEL+LDASEIVI STRQEI+EQW LYDGF+ IL RKLRAR+KR + Sbjct: 366 RIEAEELTLDASEIVITSTRQEIDEQWRLYDGFDPILERKLRARIKRNVS 415
>SPS1_CITUN (O22060) Sucrose-phosphate synthase 1 (EC 2.4.1.14)| (UDP-glucose-fructose-phosphate glucosyltransferase 1) Length = 1057 Score = 245 bits (625), Expect = 7e-65 Identities = 119/183 (65%), Positives = 135/183 (73%) Frame = +1 Query: 7 EMLVSTTFKNSKQEKGENSGGYIIRIPFGPRDMYLTKERLWPFIQEFVDGALSHIVRMSK 186 EML + + GE+SG YIIRIPFGP+D Y+ KE LWP I EFVDGAL+HI+RMS Sbjct: 234 EMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSN 293 Query: 187 TIGEEIGCGHPVWPAVIHGHYXXXXXXXXXXXXXXNLPMAFTGHFLGKDKLEGLLKQGRQ 366 +GE+IG G PVWP IHGHY N+PM FTGH LG+DKLE LLKQ R Sbjct: 294 VLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARL 353 Query: 367 SREEINMTYKIMRRIEAEELSLDASEIVIASTRQEIEEQWNLYDGFEVILARKLRARVKR 546 SR+EIN TYKIMRRIEAEELSLDASEIVI STRQEIEEQW LYDGF+ +L RKLRAR+KR Sbjct: 354 SRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKR 413 Query: 547 GAN 555 + Sbjct: 414 NVS 416
>SPS2_CRAPL (O04933) Sucrose-phosphate synthase 2 (EC 2.4.1.14)| (UDP-glucose-fructose-phosphate glucosyltransferase 2) Length = 1081 Score = 240 bits (612), Expect = 2e-63 Identities = 115/175 (65%), Positives = 134/175 (76%) Frame = +1 Query: 31 KNSKQEKGENSGGYIIRIPFGPRDMYLTKERLWPFIQEFVDGALSHIVRMSKTIGEEIGC 210 + +++ GE SG YIIRIPFGPRD YL KE LWP IQEFVDGALSHIV MSK +G++IG Sbjct: 260 EEEEEDLGEGSGAYIIRIPFGPRDKYLRKELLWPHIQEFVDGALSHIVNMSKALGDQIGG 319 Query: 211 GHPVWPAVIHGHYXXXXXXXXXXXXXXNLPMAFTGHFLGKDKLEGLLKQGRQSREEINMT 390 G PVWP VIHGHY N+PM TGH LG++KLE LLKQGRQ++E+IN Sbjct: 320 GQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQTKEDINSM 379 Query: 391 YKIMRRIEAEELSLDASEIVIASTRQEIEEQWNLYDGFEVILARKLRARVKRGAN 555 Y+IMRRIEAEELSLDA+E+VI ST+QEIEEQW LYDGF+V L R LRAR +RG N Sbjct: 380 YRIMRRIEAEELSLDAAELVITSTKQEIEEQWGLYDGFDVKLERVLRARARRGVN 434
>SPS_VICFA (Q43876) Sucrose-phosphate synthase (EC 2.4.1.14)| (UDP-glucose-fructose-phosphate glucosyltransferase) Length = 1059 Score = 238 bits (607), Expect = 9e-63 Identities = 112/183 (61%), Positives = 134/183 (73%) Frame = +1 Query: 7 EMLVSTTFKNSKQEKGENSGGYIIRIPFGPRDMYLTKERLWPFIQEFVDGALSHIVRMSK 186 EML + GE+SG YIIRIPFGPR+ Y+ KE LWP+I EFVDGA+ HI++MSK Sbjct: 235 EMLAPRNTDEFGDDMGESSGAYIIRIPFGPRNKYIPKEELWPYIPEFVDGAMGHIIQMSK 294 Query: 187 TIGEEIGCGHPVWPAVIHGHYXXXXXXXXXXXXXXNLPMAFTGHFLGKDKLEGLLKQGRQ 366 +GE+IG GH VWP IHGHY N+PM FTGH LG+DKLE LLKQGR Sbjct: 295 ALGEQIGSGHAVWPVAIHGHYADAGDSAALLSGALNVPMIFTGHSLGRDKLEQLLKQGRL 354 Query: 367 SREEINMTYKIMRRIEAEELSLDASEIVIASTRQEIEEQWNLYDGFEVILARKLRARVKR 546 S +EIN TYKIMRRIEAEEL+LD +EIVI STRQEIEEQW LY+GF+ +L RK+RAR++R Sbjct: 355 STDEINSTYKIMRRIEAEELALDGTEIVITSTRQEIEEQWRLYNGFDPVLERKIRARIRR 414 Query: 547 GAN 555 + Sbjct: 415 NVS 417
>SPS_MAIZE (P31927) Sucrose-phosphate synthase (EC 2.4.1.14)| (UDP-glucose-fructose-phosphate glucosyltransferase) Length = 1068 Score = 226 bits (577), Expect = 3e-59 Identities = 108/174 (62%), Positives = 130/174 (74%) Frame = +1 Query: 34 NSKQEKGENSGGYIIRIPFGPRDMYLTKERLWPFIQEFVDGALSHIVRMSKTIGEEIGCG 213 N + GE+ G YI+RIP GPRD YL KE LWP++QEFVDGAL+HI+ MSK +GE++G G Sbjct: 251 NDGEGMGESGGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQVGNG 310 Query: 214 HPVWPAVIHGHYXXXXXXXXXXXXXXNLPMAFTGHFLGKDKLEGLLKQGRQSREEINMTY 393 PV P VIHGHY N+PM TGH LG++KLE LLKQGR S+EEI+ TY Sbjct: 311 RPVLPYVIHGHYADAGDVAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRMSKEEIDSTY 370 Query: 394 KIMRRIEAEELSLDASEIVIASTRQEIEEQWNLYDGFEVILARKLRARVKRGAN 555 KIMRRIE EEL+LDASE+VI STRQEI+EQW LYDGF+V L + LRAR +RG + Sbjct: 371 KIMRRIEGEELALDASELVITSTRQEIDEQWGLYDGFDVKLEKVLRARARRGVS 424
>SPS_ORYSA (Q43802) Sucrose-phosphate synthase (EC 2.4.1.14)| (UDP-glucose-fructose-phosphate glucosyltransferase) Length = 1049 Score = 147 bits (370), Expect = 3e-35 Identities = 72/128 (56%), Positives = 90/128 (70%) Frame = +1 Query: 172 VRMSKTIGEEIGCGHPVWPAVIHGHYXXXXXXXXXXXXXXNLPMAFTGHFLGKDKLEGLL 351 + MSK +GE++ G V P VIHGHY N+PM TGH LG++KLE ++ Sbjct: 298 LNMSKALGEQVSNGKLVLPYVIHGHYADAGDVAALLSGALNVPMVLTGHSLGRNKLEQIM 357 Query: 352 KQGRQSREEINMTYKIMRRIEAEELSLDASEIVIASTRQEIEEQWNLYDGFEVILARKLR 531 KQGR S+EEI+ TYKIMRRIE EEL+LDA+E VI STRQE +EQW LYDGF+V L + LR Sbjct: 358 KQGRMSKEEIDSTYKIMRRIEGEELALDATEPVITSTRQENDEQWGLYDGFDVKLEKVLR 417 Query: 532 ARVKRGAN 555 AR +RG + Sbjct: 418 ARARRGVS 425
>SUS1_DAUCA (P49035) Sucrose synthase isoform I (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase 1) (Susy*Dc1) Length = 808 Score = 33.9 bits (76), Expect = 0.32 Identities = 31/157 (19%), Positives = 61/157 (38%), Gaps = 4/157 (2%) Frame = +1 Query: 16 VSTTFKNSKQEKGENSGGYIIRIPF----GPRDMYLTKERLWPFIQEFVDGALSHIVRMS 183 V TT ++ +I+R+PF G ++++ +WP+I+ F + Sbjct: 345 VGTTCNQRLEKVFGAEHAHILRVPFRTEKGILRKWISRFEVWPYIETF-----------T 393 Query: 184 KTIGEEIGCGHPVWPAVIHGHYXXXXXXXXXXXXXXNLPMAFTGHFLGKDKLEGLLKQGR 363 + + +EI P +I G+Y + H L K K Sbjct: 394 EDVAKEIALELQAKPDLIIGNYSEGNLVASLLAHKLGVTQCTIAHALEKTK----YPDSD 449 Query: 364 QSREEINMTYKIMRRIEAEELSLDASEIVIASTRQEI 474 E+ + Y + A+ ++++ ++ +I ST QEI Sbjct: 450 IYWEKFDKKYHFSSQFTADLIAMNHTDFIITSTFQEI 486
>GPDA_XYLFT (Q87CK3) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)| (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) Length = 346 Score = 31.2 bits (69), Expect = 2.1 Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 1/72 (1%) Frame = +1 Query: 313 GHFLGKDK-LEGLLKQGRQSREEINMTYKIMRRIEAEELSLDASEIVIASTRQEIEEQWN 489 G LG+ + L +++ Q E + + ++MR E + L SE V A R+EI Sbjct: 263 GFALGRGQSLSDAIREIGQVVESVQTSDEVMRHAEQNGVELPISEAVRAVLREEITP--- 319 Query: 490 LYDGFEVILARK 525 Y G +V+LAR+ Sbjct: 320 -YAGMKVLLARE 330
>PROP1_BOVIN (Q8MJI9) Homeobox protein prophet of Pit-1 (PROP-1)| (Pituitary-specific homeodomain factor) Length = 226 Score = 30.8 bits (68), Expect = 2.7 Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Frame = -1 Query: 255 AGIMPMNHSRPYWMPTADFFTNCF*HPHNMAECTINKFLNERPQTFFS*VHISWSK-WYP 79 +G +P S PY PT CF HP+N A L +P T S S+ WYP Sbjct: 144 SGFLPEPPSCPYSYPTPPPPMTCFPHPYNRA-------LPSQPSTGSSFARPYQSEDWYP 196 Query: 78 N 76 N Sbjct: 197 N 197
>GPDA_XYLFA (Q9PCH7) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)| (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) Length = 346 Score = 30.0 bits (66), Expect = 4.6 Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 1/72 (1%) Frame = +1 Query: 313 GHFLGKDK-LEGLLKQGRQSREEINMTYKIMRRIEAEELSLDASEIVIASTRQEIEEQWN 489 G LG+ + L +++ Q E + + ++MR+ E + L SE V A R+EI Sbjct: 263 GFALGRGQSLSDAIREIGQVVESVQTSDEVMRQAEQHGVELPISEAVRAVLREEITP--- 319 Query: 490 LYDGFEVILARK 525 Y G + +LAR+ Sbjct: 320 -YAGMKALLARE 330
>CP3A4_HUMAN (P08684) Cytochrome P450 3A4 (EC 1.14.13.67) (Quinine| 3-monooxygenase) (CYPIIIA4) (Nifedipine oxidase) (Taurochenodeoxycholate 6-alpha-hydroxylase) (EC 1.14.13.97) (NF-25) (P450-PCN1) Length = 502 Score = 29.3 bits (64), Expect = 7.9 Identities = 16/47 (34%), Positives = 24/47 (51%) Frame = -1 Query: 429 RQFLRLDSAHYFVCHIYFFP*LTPLLEKPFQFIFPKEMSRECHRQVK 289 ++ LR D F I FP L P+LE +FP+E++ + VK Sbjct: 207 KKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVK 253
>CILA_KLEPN (P45413) Citrate lyase alpha chain (EC 4.1.3.6) (Citrase alpha| chain) (Citrate (pro-3S)-lyase alpha chain) (Citrate CoA-transferase subunit) (EC 2.8.3.10) Length = 508 Score = 29.3 bits (64), Expect = 7.9 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 6/58 (10%) Frame = +1 Query: 91 GPRDMYLTKERL----WPFIQEFVDGALSHIVR--MSKTIGEEIGCGHPVWPAVIHGH 246 G RD+ L L WP I+ +G + I + +GEEI G P IH H Sbjct: 85 GFRDLTLASSSLIDAHWPLIEHIKNGVIRQIYTSGLRGKLGEEISAGLMENPVQIHSH 142 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 81,858,957 Number of Sequences: 219361 Number of extensions: 1678446 Number of successful extensions: 4266 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 4162 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4266 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4545742239 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
