ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd26l01 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X95257.1|HVXYLISOP H.vulgare mRNA for xylose isomerase Length = 1710 Score = 1275 bits (643), Expect = 0.0 Identities = 660/663 (99%), Gaps = 2/663 (0%) Strand = Plus / Plus Query: 12 ggagttgaaaggtggtgcttccatgacagggnacatcgcccctgatggcaaaacactcgc 71 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 487 ggagttgaaaggtggtgcttccatgacaggg-acatcgcccctgatggcaaaacactcgc 545 Query: 72 ggaaacaaatgctaacttggatgagatagttgagctggcaaagcaactccagagtgagac 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 546 ggaaacaaatgctaacttggatgagatagttgagctggcaaagcaactccagagtgagac 605 Query: 132 caatataaagccattatggggaactgcacaacttttcatgcatccacgttacatgcacgg 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 606 caatataaagccattatggggaactgcacaacttttcatgcatccacgttacatgcacgg 665 Query: 192 agctgctactagcccagaggtcaaggtgtatgcttatgctgctgctcaagtgaagaaagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 666 agctgctactagcccagaggtcaaggtgtatgcttatgctgctgctcaagtgaagaaagc 725 Query: 252 tttggaggttactcactacctaggcggtgagaactacgtattctggggtggaagagaggg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 726 tttggaggttactcactacctaggcggtgagaactacgtattctggggtggaagagaggg 785 Query: 312 ttaccaaactcttctcaataccgatatgaagagggaacttgaacatttggctaactttct 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 786 ttaccaaactcttctcaataccgatatgaagagggaacttgaacatttggctaactttct 845 Query: 372 tcaagctgctgttaaccacaagaagaagatcggctttaacggaacattgttgatagagcc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 846 tcaagctgctgttaaccacaagaagaagatcggctttaacggaacattgttgatagagcc 905 Query: 432 taagccacaagaaccaacaaagcatcagtatgactgggatgttgcaactacattctcttt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 906 taagccacaagaaccaacaaagcatcagtatgactgggatgttgcaactacattctcttt 965 Query: 492 cctacagaagtttggtcttacaggggaattcaagataaatgttgagtgcaaccatgctac 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 966 cctacagaagtttggtcttacaggggaattcaagataaatgttgagtgcaaccatgctac 1025 Query: 552 tctctctggacatagctgccatcacgagcttgagactgcacgcattaatgacattcttgg 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1026 tctctctggacatagctgccatcacgagcttgagactgcacgcattaatgacattcttgg 1085 Query: 612 aaacattgatgcaaacactggtgatccacaagttggttgggacacgggatgagttcctta 671 |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 1086 aaacattgatgcaaacactggtgatccacaggttggttgggacac-ggatgagttcctta 1144 Query: 672 cag 674 ||| Sbjct: 1145 cag 1147
>gb|BT018392.1| Zea mays clone EL01N0319D07.d mRNA sequence Length = 1548 Score = 662 bits (334), Expect = 0.0 Identities = 569/646 (88%), Gaps = 1/646 (0%) Strand = Plus / Plus Query: 11 gggagttgaaaggtggtgcttccatgacagggnacatcgcccctgatggcaaaacactcg 70 ||||||||| | ||||||||||||||||||| | || ||||| ||||| || || || | Sbjct: 241 gggagttgacaaatggtgcttccatgacaggg-atattgccccggatgggaagactcttg 299 Query: 71 cggaaacaaatgctaacttggatgagatagttgagctggcaaagcaactccagagtgaga 130 ||||||||| ||||||||||||||||||| ||||||||||||| || ||| |||||| Sbjct: 300 aagaaacaaattctaacttggatgagatagtccagctggcaaagcagctgcagggtgaga 359 Query: 131 ccaatataaagccattatggggaactgcacaacttttcatgcatccacgttacatgcacg 190 |||||||||||||||| ||||| || ||||| || || |||||||||||||||||||| | Sbjct: 360 ccaatataaagccattgtggggtaccgcacagctctttatgcatccacgttacatgcatg 419 Query: 191 gagctgctactagcccagaggtcaaggtgtatgcttatgctgctgctcaagtgaagaaag 250 | |||||||| ||||||||||| || || ||||||||||| ||||| ||||| ||||||| Sbjct: 420 gcgctgctacgagcccagaggttaaagtatatgcttatgcggctgcacaagttaagaaag 479 Query: 251 ctttggaggttactcactacctaggcggtgagaactacgtattctggggtggaagagagg 310 |||||||||| |||||||||||||| ||||| ||||| || ||||||||||||||||||| Sbjct: 480 ctttggaggtcactcactacctaggtggtgaaaactatgtgttctggggtggaagagagg 539 Query: 311 gttaccaaactcttctcaataccgatatgaagagggaacttgaacatttggctaactttc 370 |||||||||||||||| ||||| ||||||||||| |||||||| ||| |||||||||||| Sbjct: 540 gttaccaaactcttctgaatactgatatgaagagagaacttgaccatctggctaactttc 599 Query: 371 ttcaagctgctgttaaccacaagaagaagatcggctttaacggaacattgttgatagagc 430 |||||||||||||| || ||||||||||||| || || ||||||||| | |||||||||| Sbjct: 600 ttcaagctgctgttgactacaagaagaagattggattcaacggaacactattgatagagc 659 Query: 431 ctaagccacaagaaccaacaaagcatcagtatgactgggatgttgcaactacattctctt 490 |||| ||||| ||||||||||| || |||||||||||||||||||| ||||| || ||| Sbjct: 660 ctaaaccacaggaaccaacaaaacaccagtatgactgggatgttgcgactacgtttgctt 719 Query: 491 tcctacagaagtttggtcttacaggggaattcaagataaatgttgagtgcaaccatgcta 550 | |||||||||| ||||||||||| || |||||||| |||||||||||||||||||||| Sbjct: 720 ttctacagaagtacggtcttacaggagagttcaagattaatgttgagtgcaaccatgcta 779 Query: 551 ctctctctggacatagctgccatcacgagcttgagactgcacgcattaatgacattcttg 610 |||| |||||||| ||||||||||| || | ||||||||||| ||||||| | |||||| Sbjct: 780 ctctatctggacacagctgccatcatgaattggagactgcacggattaatggccttcttg 839 Query: 611 gaaacattgatgcaaacactggtgatccacaagttggttgggacac 656 |||| || |||||||||||||||||||| ||||||||||||||||| Sbjct: 840 gaaatatcgatgcaaacactggtgatcctcaagttggttgggacac 885
>ref|XM_479446.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1760 Score = 656 bits (331), Expect = 0.0 Identities = 582/663 (87%), Gaps = 2/663 (0%) Strand = Plus / Plus Query: 12 ggagttgaaaggtggtgcttccatgacagggnacatcgcccctgatggcaaaacactcgc 71 |||||||| |||||||||||||||||||||| | || ||||||||||||||||||||| | Sbjct: 515 ggagttgacaggtggtgcttccatgacaggg-atattgcccctgatggcaaaacactcac 573 Query: 72 ggaaacaaatgctaacttggatgagatagttgagctggcaaagcaactccagagtgagac 131 |||||||||| || ||||||||||||||||| ||||||||| |||||||| ||||| Sbjct: 574 ggaaacaaataaaaatttggatgagatagttgaactggcaaagaaactccaggaggagac 633 Query: 132 caatataaagccattatggggaactgcacaacttttcatgcatccacgttacatgcacgg 191 ||||||||| ||| | ||||| |||||||| ||||||||||| || || ||||||||||| Sbjct: 634 caatataaaaccactgtgggggactgcacagcttttcatgcacccgcgctacatgcacgg 693 Query: 192 agctgctactagcccagaggtcaaggtgtatgcttatgctgctgctcaagtgaagaaagc 251 |||||||||||||||||||| || ||||||||||||| |||||||||||| |||||||| Sbjct: 694 tgctgctactagcccagaggttaaagtgtatgcttatggtgctgctcaagttaagaaagc 753 Query: 252 tttggaggttactcactacctaggcggtgagaactacgtattctggggtggaagagaggg 311 ||| ||||| || ||||||||||||||||| ||||| || |||||||| ||||||||||| Sbjct: 754 tttagaggtcacccactacctaggcggtgaaaactatgttttctggggaggaagagaggg 813 Query: 312 ttaccaaactcttctcaataccgatatgaagagggaacttgaacatttggctaactttct 371 ||||||||||||||| ||||| || |||||||| |||||||| |||||||||| ||||| Sbjct: 814 ttaccaaactcttcttaatactgacatgaagagagaacttgaccatttggctagttttct 873 Query: 372 tcaagctgctgttaaccacaagaagaagatcggctttaacggaacattgttgatagagcc 431 ||||||||| ||| || ||||||||||||| || ||||| |||||| | ||||||||||| Sbjct: 874 tcaagctgcagttgactacaagaagaagattggatttaatggaacactcttgatagagcc 933 Query: 432 taagccacaagaaccaacaaagcatcagtatgactgggatgttgcaactacattctcttt 491 ||| ||||||||||| ||||| || ||||| || |||||||||||||| ||||||||||| Sbjct: 934 taaaccacaagaacccacaaaacaccagtacgattgggatgttgcaaccacattctcttt 993 Query: 492 cctacagaagtttggtcttacaggggaattcaagataaatgttgagtgcaaccatgctac 551 ||||||||| | |||||| ||||| |||||||||||||||||||| |||||||| ||||| Sbjct: 994 cctacagaaatatggtctaacaggagaattcaagataaatgttgaatgcaaccacgctac 1053 Query: 552 tctctctggacatagctgccatcacgagcttgagactgcacgcattaatgacattcttgg 611 ||| ||||||||||||||||| || ||||||||||||||| | ||||||| | ||||| Sbjct: 1054 tctatctggacatagctgccaccatgagcttgagactgcaagaattaatggtctgcttgg 1113 Query: 612 aaacattgatgcaaacactggtgatccacaagttggttgggacacgggatgagttcctta 671 || |||||||| |||||||||||||| || | ||||||||||| ||| ||||||||| Sbjct: 1114 gaatattgatgccaacactggtgatccccagatcggttgggacac-cgatcagttcctta 1172 Query: 672 cag 674 ||| Sbjct: 1173 cag 1175
>dbj|AK072249.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001E09, full insert sequence Length = 1760 Score = 656 bits (331), Expect = 0.0 Identities = 582/663 (87%), Gaps = 2/663 (0%) Strand = Plus / Plus Query: 12 ggagttgaaaggtggtgcttccatgacagggnacatcgcccctgatggcaaaacactcgc 71 |||||||| |||||||||||||||||||||| | || ||||||||||||||||||||| | Sbjct: 515 ggagttgacaggtggtgcttccatgacaggg-atattgcccctgatggcaaaacactcac 573 Query: 72 ggaaacaaatgctaacttggatgagatagttgagctggcaaagcaactccagagtgagac 131 |||||||||| || ||||||||||||||||| ||||||||| |||||||| ||||| Sbjct: 574 ggaaacaaataaaaatttggatgagatagttgaactggcaaagaaactccaggaggagac 633 Query: 132 caatataaagccattatggggaactgcacaacttttcatgcatccacgttacatgcacgg 191 ||||||||| ||| | ||||| |||||||| ||||||||||| || || ||||||||||| Sbjct: 634 caatataaaaccactgtgggggactgcacagcttttcatgcacccgcgctacatgcacgg 693 Query: 192 agctgctactagcccagaggtcaaggtgtatgcttatgctgctgctcaagtgaagaaagc 251 |||||||||||||||||||| || ||||||||||||| |||||||||||| |||||||| Sbjct: 694 tgctgctactagcccagaggttaaagtgtatgcttatggtgctgctcaagttaagaaagc 753 Query: 252 tttggaggttactcactacctaggcggtgagaactacgtattctggggtggaagagaggg 311 ||| ||||| || ||||||||||||||||| ||||| || |||||||| ||||||||||| Sbjct: 754 tttagaggtcacccactacctaggcggtgaaaactatgttttctggggaggaagagaggg 813 Query: 312 ttaccaaactcttctcaataccgatatgaagagggaacttgaacatttggctaactttct 371 ||||||||||||||| ||||| || |||||||| |||||||| |||||||||| ||||| Sbjct: 814 ttaccaaactcttcttaatactgacatgaagagagaacttgaccatttggctagttttct 873 Query: 372 tcaagctgctgttaaccacaagaagaagatcggctttaacggaacattgttgatagagcc 431 ||||||||| ||| || ||||||||||||| || ||||| |||||| | ||||||||||| Sbjct: 874 tcaagctgcagttgactacaagaagaagattggatttaatggaacactcttgatagagcc 933 Query: 432 taagccacaagaaccaacaaagcatcagtatgactgggatgttgcaactacattctcttt 491 ||| ||||||||||| ||||| || ||||| || |||||||||||||| ||||||||||| Sbjct: 934 taaaccacaagaacccacaaaacaccagtacgattgggatgttgcaaccacattctcttt 993 Query: 492 cctacagaagtttggtcttacaggggaattcaagataaatgttgagtgcaaccatgctac 551 ||||||||| | |||||| ||||| |||||||||||||||||||| |||||||| ||||| Sbjct: 994 cctacagaaatatggtctaacaggagaattcaagataaatgttgaatgcaaccacgctac 1053 Query: 552 tctctctggacatagctgccatcacgagcttgagactgcacgcattaatgacattcttgg 611 ||| ||||||||||||||||| || ||||||||||||||| | ||||||| | ||||| Sbjct: 1054 tctatctggacatagctgccaccatgagcttgagactgcaagaattaatggtctgcttgg 1113 Query: 612 aaacattgatgcaaacactggtgatccacaagttggttgggacacgggatgagttcctta 671 || |||||||| |||||||||||||| || | ||||||||||| ||| ||||||||| Sbjct: 1114 gaatattgatgccaacactggtgatccccagatcggttgggacac-cgatcagttcctta 1172 Query: 672 cag 674 ||| Sbjct: 1173 cag 1175
>gb|AY104014.1| Zea mays PCO103489 mRNA sequence Length = 2135 Score = 646 bits (326), Expect = 0.0 Identities = 567/646 (87%), Gaps = 1/646 (0%) Strand = Plus / Plus Query: 11 gggagttgaaaggtggtgcttccatgacagggnacatcgcccctgatggcaaaacactcg 70 ||||||||| | ||||||||||||||||||| | || ||||| ||||| || || || | Sbjct: 819 gggagttgacaaatggtgcttccatgacaggg-atattgccccggatgggaagactcttg 877 Query: 71 cggaaacaaatgctaacttggatgagatagttgagctggcaaagcaactccagagtgaga 130 ||||||||| ||||||||||||||||||| ||||||||||||| || ||| |||||| Sbjct: 878 aagaaacaaattctaacttggatgagatagtccagctggcaaagcagctgcagggtgaga 937 Query: 131 ccaatataaagccattatggggaactgcacaacttttcatgcatccacgttacatgcacg 190 |||||||||||||||| ||||| || ||||| || || |||||||||||||||||||| | Sbjct: 938 ccaatataaagccattgtggggtaccgcacagctctttatgcatccacgttacatgcatg 997 Query: 191 gagctgctactagcccagaggtcaaggtgtatgcttatgctgctgctcaagtgaagaaag 250 | |||||||| ||||||||||| || || ||||||||||| ||||| ||||| ||||||| Sbjct: 998 gcgctgctacgagcccagaggttaaagtatatgcttatgcggctgcacaagttaagaaag 1057 Query: 251 ctttggaggttactcactacctaggcggtgagaactacgtattctggggtggaagagagg 310 |||||||||| |||||||||||||| ||||| ||||| || ||||||||||||||||||| Sbjct: 1058 ctttggaggtcactcactacctaggtggtgaaaactatgtgttctggggtggaagagagg 1117 Query: 311 gttaccaaactcttctcaataccgatatgaagagggaacttgaacatttggctaactttc 370 |||||||||||||||| ||||| ||||||||||| |||||||| ||| |||||||||||| Sbjct: 1118 gttaccaaactcttctgaatactgatatgaagagagaacttgaccatctggctaactttc 1177 Query: 371 ttcaagctgctgttaaccacaagaagaagatcggctttaacggaacattgttgatagagc 430 |||||||||||||| || ||||||||||||| || || ||||||||| | |||||||||| Sbjct: 1178 ttcaagctgctgttgactacaagaagaagattggattcaacggaacactattgatagagc 1237 Query: 431 ctaagccacaagaaccaacaaagcatcagtatgactgggatgttgcaactacattctctt 490 |||| ||||| ||||||||||| || |||||||||||||||||||| ||||| || ||| Sbjct: 1238 ctaaaccacaggaaccaacaaaacaccagtatgactgggatgttgcgactacgtttgctt 1297 Query: 491 tcctacagaagtttggtcttacaggggaattcaagataaatgttgagtgcaaccatgcta 550 | |||||||||| ||||||||||| || |||||||| |||||||||||||||||||||| Sbjct: 1298 ttctacagaagtacggtcttacaggagagttcaagattaatgttgagtgcaaccatgcta 1357 Query: 551 ctctctctggacatagctgccatcacgagcttgagactgcacgcattaatgacattcttg 610 |||| |||||||| ||||||||||| || | ||||||||||| ||||||| | |||| Sbjct: 1358 ctctatctggacacagctgccatcatgaattggagactgcacggattaatgggctgcttg 1417 Query: 611 gaaacattgatgcaaacactggtgatccacaagttggttgggacac 656 |||| || |||||||||||||||||||| ||||||||||||||||| Sbjct: 1418 gaaatatcgatgcaaacactggtgatcctcaagttggttgggacac 1463
>dbj|AK104085.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-F02, full insert sequence Length = 1177 Score = 583 bits (294), Expect = e-163 Identities = 514/586 (87%), Gaps = 1/586 (0%) Strand = Plus / Plus Query: 89 tggatgagatagttgagctggcaaagcaactccagagtgagaccaatataaagccattat 148 |||||||||||||||| ||||||||| |||||||| |||||||||||||| ||| | | Sbjct: 1 tggatgagatagttgaactggcaaagaaactccaggaggagaccaatataaaaccactgt 60 Query: 149 ggggaactgcacaacttttcatgcatccacgttacatgcacggagctgctactagcccag 208 |||| |||||||| ||||||||||| || || ||||||||||| |||||||||||||||| Sbjct: 61 gggggactgcacagcttttcatgcacccgcgctacatgcacggtgctgctactagcccag 120 Query: 209 aggtcaaggtgtatgcttatgctgctgctcaagtgaagaaagctttggaggttactcact 268 |||| || ||||||||||||| |||||||||||| ||||||||||| ||||| || |||| Sbjct: 121 aggttaaagtgtatgcttatggtgctgctcaagttaagaaagctttagaggtcacccact 180 Query: 269 acctaggcggtgagaactacgtattctggggtggaagagagggttaccaaactcttctca 328 ||||||||||||| ||||| || |||||||| |||||||||||||||||||||||||| | Sbjct: 181 acctaggcggtgaaaactatgttttctggggaggaagagagggttaccaaactcttctta 240 Query: 329 ataccgatatgaagagggaacttgaacatttggctaactttcttcaagctgctgttaacc 388 |||| || |||||||| |||||||| |||||||||| |||||||||||||| ||| || Sbjct: 241 atactgacatgaagagagaacttgaccatttggctagttttcttcaagctgcagttgact 300 Query: 389 acaagaagaagatcggctttaacggaacattgttgatagagcctaagccacaagaaccaa 448 ||||||||||||| || ||||| |||||| | |||||||||||||| ||||||||||| | Sbjct: 301 acaagaagaagattggatttaatggaacactcttgatagagcctaaaccacaagaaccca 360 Query: 449 caaagcatcagtatgactgggatgttgcaactacattctctttcctacagaagtttggtc 508 |||| || ||||| || |||||||||||||| |||||||||||||||||||| | ||||| Sbjct: 361 caaaacaccagtacgattgggatgttgcaaccacattctctttcctacagaaatatggtc 420 Query: 509 ttacaggggaattcaagataaatgttgagtgcaaccatgctactctctctggacatagct 568 | ||||| |||||||||||||||||||| |||||||| |||||||| ||||||||||||| Sbjct: 421 taacaggagaattcaagataaatgttgaatgcaaccacgctactctatctggacatagct 480 Query: 569 gccatcacgagcttgagactgcacgcattaatgacattcttggaaacattgatgcaaaca 628 |||| || ||||||||||||||| | ||||||| | ||||| || |||||||| |||| Sbjct: 481 gccaccatgagcttgagactgcaagaattaatggtctgcttgggaatattgatgccaaca 540 Query: 629 ctggtgatccacaagttggttgggacacgggatgagttccttacag 674 |||||||||| || | ||||||||||| ||| |||||||||||| Sbjct: 541 ctggtgatccccagatcggttgggacac-cgatcagttccttacag 585
>gb|AF140230.1|AF140230 Oryza sativa xylose isomerase mRNA, partial cds Length = 510 Score = 458 bits (231), Expect = e-125 Identities = 388/439 (88%), Gaps = 1/439 (0%) Strand = Plus / Plus Query: 14 agttgaaaggtggtgcttccatgacagggnacatcgcccctgatggcaaaacactcgcgg 73 |||||| |||||||||||||||||||||| | || ||||||||||||||||||||| ||| Sbjct: 65 agttgacaggtggtgcttccatgacaggg-atattgcccctgatggcaaaacactcacgg 123 Query: 74 aaacaaatgctaacttggatgagatagttgagctggcaaagcaactccagagtgagacca 133 |||||||| || ||||||||||||||||| ||||||||| |||||||| ||||||| Sbjct: 124 aaacaaataaaaatttggatgagatagttgaactggcaaagaaactccaggaggagacca 183 Query: 134 atataaagccattatggggaactgcacaacttttcatgcatccacgttacatgcacggag 193 ||||||| ||| | ||||| |||||||| ||||||||||| || || ||||||||||| | Sbjct: 184 atataaaaccactgtgggggactgcacagcttttcatgcacccgcgctacatgcacggtg 243 Query: 194 ctgctactagcccagaggtcaaggtgtatgcttatgctgctgctcaagtgaagaaagctt 253 ||||||||||||||||||| || ||||||||||||| |||||||||||| |||||||||| Sbjct: 244 ctgctactagcccagaggttaaagtgtatgcttatggtgctgctcaagttaagaaagctt 303 Query: 254 tggaggttactcactacctaggcggtgagaactacgtattctggggtggaagagagggtt 313 | ||||| || ||||||||||||||||| ||||| || |||||||| ||||||||||||| Sbjct: 304 tagaggtcacccactacctaggcggtgaaaactatgttttctggggaggaagagagggtt 363 Query: 314 accaaactcttctcaataccgatatgaagagggaacttgaacatttggctaactttcttc 373 ||||||||||||| ||||| || |||||||| |||||||| |||||||||| ||||||| Sbjct: 364 accaaactcttcttaatactgacatgaagagagaacttgaccatttggctagttttcttc 423 Query: 374 aagctgctgttaaccacaagaagaagatcggctttaacggaacattgttgatagagccta 433 ||||||| ||| || ||||||||||||| || ||||| |||||| | ||||||||||||| Sbjct: 424 aagctgcagttgactacaagaagaagattggatttaatggaacactcttgatagagccta 483 Query: 434 agccacaagaaccaacaaa 452 | ||||||||||| ||||| Sbjct: 484 aaccacaagaacccacaaa 502
>emb|X95256.1|HVXYLISOG H.vulgare xylose isomerase gene Length = 4473 Score = 208 bits (105), Expect = 2e-50 Identities = 105/105 (100%) Strand = Plus / Plus Query: 257 aggttactcactacctaggcggtgagaactacgtattctggggtggaagagagggttacc 316 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2317 aggttactcactacctaggcggtgagaactacgtattctggggtggaagagagggttacc 2376 Query: 317 aaactcttctcaataccgatatgaagagggaacttgaacatttgg 361 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2377 aaactcttctcaataccgatatgaagagggaacttgaacatttgg 2421 Score = 163 bits (82), Expect = 9e-37 Identities = 82/82 (100%) Strand = Plus / Plus Query: 122 agagtgagaccaatataaagccattatggggaactgcacaacttttcatgcatccacgtt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2031 agagtgagaccaatataaagccattatggggaactgcacaacttttcatgcatccacgtt 2090 Query: 182 acatgcacggagctgctactag 203 |||||||||||||||||||||| Sbjct: 2091 acatgcacggagctgctactag 2112 Score = 159 bits (80), Expect = 1e-35 Identities = 83/84 (98%) Strand = Plus / Plus Query: 565 agctgccatcacgagcttgagactgcacgcattaatgacattcttggaaacattgatgca 624 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3218 agctgccatcacgagcttgagactgcacgcattaatgacattcttggaaacattgatgca 3277 Query: 625 aacactggtgatccacaagttggt 648 ||||||||||||||||| |||||| Sbjct: 3278 aacactggtgatccacaggttggt 3301 Score = 117 bits (59), Expect = 5e-23 Identities = 59/59 (100%) Strand = Plus / Plus Query: 202 agcccagaggtcaaggtgtatgcttatgctgctgctcaagtgaagaaagctttggaggt 260 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2188 agcccagaggtcaaggtgtatgcttatgctgctgctcaagtgaagaaagctttggaggt 2246 Score = 113 bits (57), Expect = 8e-22 Identities = 57/57 (100%) Strand = Plus / Plus Query: 459 gtatgactgggatgttgcaactacattctctttcctacagaagtttggtcttacagg 515 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2836 gtatgactgggatgttgcaactacattctctttcctacagaagtttggtcttacagg 2892 Score = 109 bits (55), Expect = 1e-20 Identities = 55/55 (100%) Strand = Plus / Plus Query: 512 caggggaattcaagataaatgttgagtgcaaccatgctactctctctggacatag 566 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3079 caggggaattcaagataaatgttgagtgcaaccatgctactctctctggacatag 3133 Score = 107 bits (54), Expect = 5e-20 Identities = 54/54 (100%) Strand = Plus / Plus Query: 360 ggctaactttcttcaagctgctgttaaccacaagaagaagatcggctttaacgg 413 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2520 ggctaactttcttcaagctgctgttaaccacaagaagaagatcggctttaacgg 2573 Score = 107 bits (54), Expect = 5e-20 Identities = 61/62 (98%), Gaps = 1/62 (1%) Strand = Plus / Plus Query: 12 ggagttgaaaggtggtgcttccatgacagggnacatcgcccctgatggcaaaacactcgc 71 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1296 ggagttgaaaggtggtgcttccatgacaggg-acatcgcccctgatggcaaaacactcgc 1354 Query: 72 gg 73 || Sbjct: 1355 gg 1356 Score = 103 bits (52), Expect = 7e-19 Identities = 52/52 (100%) Strand = Plus / Plus Query: 72 ggaaacaaatgctaacttggatgagatagttgagctggcaaagcaactccag 123 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1883 ggaaacaaatgctaacttggatgagatagttgagctggcaaagcaactccag 1934 Score = 99.6 bits (50), Expect = 1e-17 Identities = 50/50 (100%) Strand = Plus / Plus Query: 412 ggaacattgttgatagagcctaagccacaagaaccaacaaagcatcagta 461 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2710 ggaacattgttgatagagcctaagccacaagaaccaacaaagcatcagta 2759 Score = 42.1 bits (21), Expect = 2.3 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 646 ggttgggacacgggatgagttccttacag 674 ||||||||||||| ||||||||||||||| Sbjct: 3390 ggttgggacacgg-atgagttccttacag 3417
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 121 bits (61), Expect = 3e-24 Identities = 88/97 (90%) Strand = Plus / Minus Query: 265 cactacctaggcggtgagaactacgtattctggggtggaagagagggttaccaaactctt 324 ||||||||||||||||| ||||| || |||||||| |||||||||||||||||||||||| Sbjct: 28220882 cactacctaggcggtgaaaactatgttttctggggaggaagagagggttaccaaactctt 28220823 Query: 325 ctcaataccgatatgaagagggaacttgaacatttgg 361 || ||||| || |||||||| |||||||| ||||||| Sbjct: 28220822 cttaatactgacatgaagagagaacttgaccatttgg 28220786 Score = 81.8 bits (41), Expect = 3e-12 Identities = 68/77 (88%) Strand = Plus / Minus Query: 127 gagaccaatataaagccattatggggaactgcacaacttttcatgcatccacgttacatg 186 |||||||||||||| ||| | ||||| |||||||| ||||||||||| || || |||||| Sbjct: 28221177 gagaccaatataaaaccactgtgggggactgcacagcttttcatgcacccgcgctacatg 28221118 Query: 187 cacggagctgctactag 203 ||||| ||||||||||| Sbjct: 28221117 cacggtgctgctactag 28221101 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 510 tacaggggaattcaagataaatgttgagtgcaaccatgctactctctctggacatag 566 |||||| |||||||||||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 28220199 tacaggagaattcaagataaatgttgaatgcaaccacgctactctatctggacatag 28220143 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 202 agcccagaggtcaaggtgtatgcttatgctgctgctcaagtgaagaaagctttggaggt 260 ||||||||||| || ||||||||||||| |||||||||||| ||||||||||| ||||| Sbjct: 28221023 agcccagaggttaaagtgtatgcttatggtgctgctcaagttaagaaagctttagaggt 28220965 Score = 75.8 bits (38), Expect = 2e-10 Identities = 54/58 (93%), Gaps = 1/58 (1%) Strand = Plus / Minus Query: 12 ggagttgaaaggtggtgcttccatgacagggnacatcgcccctgatggcaaaacactc 69 |||||||| |||||||||||||||||||||| | || ||||||||||||||||||||| Sbjct: 28221801 ggagttgacaggtggtgcttccatgacaggg-atattgcccctgatggcaaaacactc 28221745 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 466 tgggatgttgcaactacattctctttcctacagaagtttggtcttacagg 515 |||||||||||||| |||||||||||||||||||| | |||||| ||||| Sbjct: 28220424 tgggatgttgcaaccacattctctttcctacagaaatatggtctaacagg 28220375 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Minus Query: 565 agctgccatcacgagcttgagactgcacgcattaatgacattcttggaaacattgatgca 624 |||||||| || ||||||||||||||| | ||||||| | ||||| || |||||||| Sbjct: 28220068 agctgccaccatgagcttgagactgcaagaattaatggtctgcttgggaatattgatgcc 28220009 Query: 625 aacactggtgatcc 638 |||||||||||||| Sbjct: 28220008 aacactggtgatcc 28219995 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 88 ttggatgagatagttgagctggcaaagcaactccag 123 ||||||||||||||||| ||||||||| |||||||| Sbjct: 28221306 ttggatgagatagttgaactggcaaagaaactccag 28221271 Score = 56.0 bits (28), Expect = 2e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 412 ggaacattgttgatagagcctaagccacaagaaccaacaaagcatcagtatg 463 |||||| | |||||||||||||| ||||||||||| ||||| || ||||||| Sbjct: 28220552 ggaacactcttgatagagcctaaaccacaagaacccacaaaacaccagtatg 28220501 Score = 48.1 bits (24), Expect = 0.038 Identities = 39/44 (88%) Strand = Plus / Minus Query: 367 tttcttcaagctgctgttaaccacaagaagaagatcggctttaa 410 |||||||||||||| ||| || ||||||||||||| || ||||| Sbjct: 28220676 tttcttcaagctgcagttgactacaagaagaagattggatttaa 28220633
>dbj|AP004570.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0625E02 Length = 153921 Score = 121 bits (61), Expect = 3e-24 Identities = 88/97 (90%) Strand = Plus / Minus Query: 265 cactacctaggcggtgagaactacgtattctggggtggaagagagggttaccaaactctt 324 ||||||||||||||||| ||||| || |||||||| |||||||||||||||||||||||| Sbjct: 76427 cactacctaggcggtgaaaactatgttttctggggaggaagagagggttaccaaactctt 76368 Query: 325 ctcaataccgatatgaagagggaacttgaacatttgg 361 || ||||| || |||||||| |||||||| ||||||| Sbjct: 76367 cttaatactgacatgaagagagaacttgaccatttgg 76331 Score = 81.8 bits (41), Expect = 3e-12 Identities = 68/77 (88%) Strand = Plus / Minus Query: 127 gagaccaatataaagccattatggggaactgcacaacttttcatgcatccacgttacatg 186 |||||||||||||| ||| | ||||| |||||||| ||||||||||| || || |||||| Sbjct: 76722 gagaccaatataaaaccactgtgggggactgcacagcttttcatgcacccgcgctacatg 76663 Query: 187 cacggagctgctactag 203 ||||| ||||||||||| Sbjct: 76662 cacggtgctgctactag 76646 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 510 tacaggggaattcaagataaatgttgagtgcaaccatgctactctctctggacatag 566 |||||| |||||||||||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 75744 tacaggagaattcaagataaatgttgaatgcaaccacgctactctatctggacatag 75688 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 202 agcccagaggtcaaggtgtatgcttatgctgctgctcaagtgaagaaagctttggaggt 260 ||||||||||| || ||||||||||||| |||||||||||| ||||||||||| ||||| Sbjct: 76568 agcccagaggttaaagtgtatgcttatggtgctgctcaagttaagaaagctttagaggt 76510 Score = 75.8 bits (38), Expect = 2e-10 Identities = 54/58 (93%), Gaps = 1/58 (1%) Strand = Plus / Minus Query: 12 ggagttgaaaggtggtgcttccatgacagggnacatcgcccctgatggcaaaacactc 69 |||||||| |||||||||||||||||||||| | || ||||||||||||||||||||| Sbjct: 77346 ggagttgacaggtggtgcttccatgacaggg-atattgcccctgatggcaaaacactc 77290 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 466 tgggatgttgcaactacattctctttcctacagaagtttggtcttacagg 515 |||||||||||||| |||||||||||||||||||| | |||||| ||||| Sbjct: 75969 tgggatgttgcaaccacattctctttcctacagaaatatggtctaacagg 75920 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Minus Query: 565 agctgccatcacgagcttgagactgcacgcattaatgacattcttggaaacattgatgca 624 |||||||| || ||||||||||||||| | ||||||| | ||||| || |||||||| Sbjct: 75613 agctgccaccatgagcttgagactgcaagaattaatggtctgcttgggaatattgatgcc 75554 Query: 625 aacactggtgatcc 638 |||||||||||||| Sbjct: 75553 aacactggtgatcc 75540 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 88 ttggatgagatagttgagctggcaaagcaactccag 123 ||||||||||||||||| ||||||||| |||||||| Sbjct: 76851 ttggatgagatagttgaactggcaaagaaactccag 76816 Score = 56.0 bits (28), Expect = 2e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 412 ggaacattgttgatagagcctaagccacaagaaccaacaaagcatcagtatg 463 |||||| | |||||||||||||| ||||||||||| ||||| || ||||||| Sbjct: 76097 ggaacactcttgatagagcctaaaccacaagaacccacaaaacaccagtatg 76046 Score = 48.1 bits (24), Expect = 0.038 Identities = 39/44 (88%) Strand = Plus / Minus Query: 367 tttcttcaagctgctgttaaccacaagaagaagatcggctttaa 410 |||||||||||||| ||| || ||||||||||||| || ||||| Sbjct: 76221 tttcttcaagctgcagttgactacaagaagaagattggatttaa 76178
>gb|AY084958.1| Arabidopsis thaliana clone 122798 mRNA, complete sequence Length = 1649 Score = 89.7 bits (45), Expect = 1e-14 Identities = 132/161 (81%) Strand = Plus / Plus Query: 142 ccattatggggaactgcacaacttttcatgcatccacgttacatgcacggagctgctact 201 ||||| |||||||| || || |||||| ||||||| |||||||||||||||| || || Sbjct: 549 ccattgtggggaacagctcagcttttcttgcatcctcgttacatgcacggaggagcgacc 608 Query: 202 agcccagaggtcaaggtgtatgcttatgctgctgctcaagtgaagaaagctttggaggtt 261 ||| | || || ||||||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 609 agctctgaagttggagtgtatgcttacgctgctgctcaggtgaagaaagccatggaggta 668 Query: 262 actcactacctaggcggtgagaactacgtattctggggtgg 302 || || ||| |||| ||||| |||||||| || |||||||| Sbjct: 669 acacattacttaggtggtgaaaactacgttttttggggtgg 709 Score = 71.9 bits (36), Expect = 3e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 533 ttgagtgcaaccatgctactctctctggacatagctgccatcacgagcttgagactgcac 592 ||||||| |||||||| || |||||||| || | || |||||||||||||| |||||| Sbjct: 940 ttgagtgtaaccatgccacgctctctggtcacacttgtcatcacgagcttgaaactgcaa 999 Query: 593 gcattaatgacattcttggaaacattgatgcaaacactgg 632 | ||||||| | ||||| |||||||||||||||||||| Sbjct: 1000 gaattaatggtttacttggcaacattgatgcaaacactgg 1039 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 427 gagcctaagccacaagaaccaacaaagcatcagtatgactgggatgttgcaac 479 ||||| ||||| |||||||| || ||||| |||||||||||||||| |||||| Sbjct: 834 gagcccaagcctcaagaacccaccaagcaccagtatgactgggatgctgcaac 886
>gb|AY084800.1| Arabidopsis thaliana clone 118282 mRNA, complete sequence Length = 1838 Score = 89.7 bits (45), Expect = 1e-14 Identities = 132/161 (81%) Strand = Plus / Plus Query: 142 ccattatggggaactgcacaacttttcatgcatccacgttacatgcacggagctgctact 201 ||||| |||||||| || || |||||| ||||||| |||||||||||||||| || || Sbjct: 686 ccattgtggggaacagctcagcttttcttgcatcctcgttacatgcacggaggagcgacc 745 Query: 202 agcccagaggtcaaggtgtatgcttatgctgctgctcaagtgaagaaagctttggaggtt 261 ||| | || || ||||||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 746 agctctgaagttggagtgtatgcttacgctgctgctcaggtgaagaaagccatggaggta 805 Query: 262 actcactacctaggcggtgagaactacgtattctggggtgg 302 || || ||| |||| ||||| |||||||| || |||||||| Sbjct: 806 acacattacttaggtggtgaaaactacgttttttggggtgg 846 Score = 71.9 bits (36), Expect = 3e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 533 ttgagtgcaaccatgctactctctctggacatagctgccatcacgagcttgagactgcac 592 ||||||| |||||||| || |||||||| || | || |||||||||||||| |||||| Sbjct: 1154 ttgagtgtaaccatgccacgctctctggtcacacttgtcatcacgagcttgaaactgcaa 1213 Query: 593 gcattaatgacattcttggaaacattgatgcaaacactgg 632 | ||||||| | ||||| |||||||||||||||||||| Sbjct: 1214 gaattaatggtttacttggcaacattgatgcaaacactgg 1253 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 427 gagcctaagccacaagaaccaacaaagcatcagtatgactgggatgttgcaac 479 ||||| ||||| |||||||| || ||||| |||||||||||||||| |||||| Sbjct: 1048 gagcccaagcctcaagaacccaccaagcaccagtatgactgggatgctgcaac 1100
>ref|NM_180872.1| Arabidopsis thaliana xylose isomerase AT5G57655 transcript variant AT5G57655.1 mRNA, complete cds Length = 1863 Score = 81.8 bits (41), Expect = 3e-12 Identities = 131/161 (81%) Strand = Plus / Plus Query: 142 ccattatggggaactgcacaacttttcatgcatccacgttacatgcacggagctgctact 201 ||||| |||||||| || || |||||| ||||||| ||||| |||||||||| || || Sbjct: 686 ccattgtggggaacagctcagcttttcttgcatcctcgttatatgcacggaggagcgacc 745 Query: 202 agcccagaggtcaaggtgtatgcttatgctgctgctcaagtgaagaaagctttggaggtt 261 ||| | || || ||||||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 746 agctctgaagttggagtgtatgcttacgctgctgctcaggtgaagaaagccatggaggta 805 Query: 262 actcactacctaggcggtgagaactacgtattctggggtgg 302 || || ||| |||| ||||| |||||||| || |||||||| Sbjct: 806 acacattacttaggtggtgaaaactacgttttttggggtgg 846 Score = 71.9 bits (36), Expect = 3e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 533 ttgagtgcaaccatgctactctctctggacatagctgccatcacgagcttgagactgcac 592 ||||||| |||||||| || |||||||| || | || |||||||||||||| |||||| Sbjct: 1154 ttgagtgtaaccatgccacgctctctggtcacacttgtcatcacgagcttgaaactgcaa 1213 Query: 593 gcattaatgacattcttggaaacattgatgcaaacactgg 632 | ||||||| | ||||| |||||||||||||||||||| Sbjct: 1214 gaattaatggtttacttggcaacattgatgcaaacactgg 1253 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 427 gagcctaagccacaagaaccaacaaagcatcagtatgactgggatgttgcaac 479 ||||| ||||| |||||||| || ||||| |||||||||||||||| |||||| Sbjct: 1048 gagcccaagcctcaagaacccaccaagcaccagtatgactgggatgctgcaac 1100
>ref|NM_125147.3| Arabidopsis thaliana xylose isomerase AT5G57655 transcript variant AT5G57655.2 mRNA, complete cds Length = 1902 Score = 81.8 bits (41), Expect = 3e-12 Identities = 131/161 (81%) Strand = Plus / Plus Query: 142 ccattatggggaactgcacaacttttcatgcatccacgttacatgcacggagctgctact 201 ||||| |||||||| || || |||||| ||||||| ||||| |||||||||| || || Sbjct: 801 ccattgtggggaacagctcagcttttcttgcatcctcgttatatgcacggaggagcgacc 860 Query: 202 agcccagaggtcaaggtgtatgcttatgctgctgctcaagtgaagaaagctttggaggtt 261 ||| | || || ||||||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 861 agctctgaagttggagtgtatgcttacgctgctgctcaggtgaagaaagccatggaggta 920 Query: 262 actcactacctaggcggtgagaactacgtattctggggtgg 302 || || ||| |||| ||||| |||||||| || |||||||| Sbjct: 921 acacattacttaggtggtgaaaactacgttttttggggtgg 961 Score = 71.9 bits (36), Expect = 3e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 533 ttgagtgcaaccatgctactctctctggacatagctgccatcacgagcttgagactgcac 592 ||||||| |||||||| || |||||||| || | || |||||||||||||| |||||| Sbjct: 1192 ttgagtgtaaccatgccacgctctctggtcacacttgtcatcacgagcttgaaactgcaa 1251 Query: 593 gcattaatgacattcttggaaacattgatgcaaacactgg 632 | ||||||| | ||||| |||||||||||||||||||| Sbjct: 1252 gaattaatggtttacttggcaacattgatgcaaacactgg 1291 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 427 gagcctaagccacaagaaccaacaaagcatcagtatgactgggatgttgcaac 479 ||||| ||||| |||||||| || ||||| |||||||||||||||| |||||| Sbjct: 1086 gagcccaagcctcaagaacccaccaagcaccagtatgactgggatgctgcaac 1138
>gb|AY136469.1| Arabidopsis thaliana expressed protein; supported by full length cDNA: Ceres: 122798 (At5g57655) mRNA, complete cds Length = 1823 Score = 81.8 bits (41), Expect = 3e-12 Identities = 131/161 (81%) Strand = Plus / Plus Query: 142 ccattatggggaactgcacaacttttcatgcatccacgttacatgcacggagctgctact 201 ||||| |||||||| || || |||||| ||||||| ||||| |||||||||| || || Sbjct: 799 ccattgtggggaacagctcagcttttcttgcatcctcgttatatgcacggaggagcgacc 858 Query: 202 agcccagaggtcaaggtgtatgcttatgctgctgctcaagtgaagaaagctttggaggtt 261 ||| | || || ||||||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 859 agctctgaagttggagtgtatgcttacgctgctgctcaggtgaagaaagccatggaggta 918 Query: 262 actcactacctaggcggtgagaactacgtattctggggtgg 302 || || ||| |||| ||||| |||||||| || |||||||| Sbjct: 919 acacattacttaggtggtgaaaactacgttttttggggtgg 959 Score = 71.9 bits (36), Expect = 3e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 533 ttgagtgcaaccatgctactctctctggacatagctgccatcacgagcttgagactgcac 592 ||||||| |||||||| || |||||||| || | || |||||||||||||| |||||| Sbjct: 1190 ttgagtgtaaccatgccacgctctctggtcacacttgtcatcacgagcttgaaactgcaa 1249 Query: 593 gcattaatgacattcttggaaacattgatgcaaacactgg 632 | ||||||| | ||||| |||||||||||||||||||| Sbjct: 1250 gaattaatggtttacttggcaacattgatgcaaacactgg 1289 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 427 gagcctaagccacaagaaccaacaaagcatcagtatgactgggatgttgcaac 479 ||||| ||||| |||||||| || ||||| |||||||||||||||| |||||| Sbjct: 1084 gagcccaagcctcaagaacccaccaagcaccagtatgactgggatgctgcaac 1136
>gb|BT006607.1| Arabidopsis thaliana At5g57655 mRNA, complete cds Length = 1434 Score = 81.8 bits (41), Expect = 3e-12 Identities = 131/161 (81%) Strand = Plus / Plus Query: 142 ccattatggggaactgcacaacttttcatgcatccacgttacatgcacggagctgctact 201 ||||| |||||||| || || |||||| ||||||| ||||| |||||||||| || || Sbjct: 532 ccattgtggggaacagctcagcttttcttgcatcctcgttatatgcacggaggagcgacc 591 Query: 202 agcccagaggtcaaggtgtatgcttatgctgctgctcaagtgaagaaagctttggaggtt 261 ||| | || || ||||||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 592 agctctgaagttggagtgtatgcttacgctgctgctcaggtgaagaaagccatggaggta 651 Query: 262 actcactacctaggcggtgagaactacgtattctggggtgg 302 || || ||| |||| ||||| |||||||| || |||||||| Sbjct: 652 acacattacttaggtggtgaaaactacgttttttggggtgg 692 Score = 71.9 bits (36), Expect = 3e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 533 ttgagtgcaaccatgctactctctctggacatagctgccatcacgagcttgagactgcac 592 ||||||| |||||||| || |||||||| || | || |||||||||||||| |||||| Sbjct: 923 ttgagtgtaaccatgccacgctctctggtcacacttgtcatcacgagcttgaaactgcaa 982 Query: 593 gcattaatgacattcttggaaacattgatgcaaacactgg 632 | ||||||| | ||||| |||||||||||||||||||| Sbjct: 983 gaattaatggtttacttggcaacattgatgcaaacactgg 1022 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 427 gagcctaagccacaagaaccaacaaagcatcagtatgactgggatgttgcaac 479 ||||| ||||| |||||||| || ||||| |||||||||||||||| |||||| Sbjct: 817 gagcccaagcctcaagaacccaccaagcaccagtatgactgggatgctgcaac 869
>emb|BX831279.1|CNS09ZCJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS74ZE05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1649 Score = 81.8 bits (41), Expect = 3e-12 Identities = 131/161 (81%) Strand = Plus / Plus Query: 142 ccattatggggaactgcacaacttttcatgcatccacgttacatgcacggagctgctact 201 ||||| |||||||| || || |||||| ||||||| ||||| |||||||||| || || Sbjct: 620 ccattgtggggaacagctcagcttttcttgcatcctcgttatatgcacggaggagcgacc 679 Query: 202 agcccagaggtcaaggtgtatgcttatgctgctgctcaagtgaagaaagctttggaggtt 261 ||| | || || ||||||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 680 agctctgaagttggagtgtatgcttacgctgctgctcaggtgaagaaagccatggaggta 739 Query: 262 actcactacctaggcggtgagaactacgtattctggggtgg 302 || || ||| |||| ||||| |||||||| || |||||||| Sbjct: 740 acacattacttaggtggtgaaaactacgttttttggggtgg 780 Score = 63.9 bits (32), Expect = 6e-07 Identities = 83/100 (83%) Strand = Plus / Plus Query: 533 ttgagtgcaaccatgctactctctctggacatagctgccatcacgagcttgagactgcac 592 ||||||| |||||||| || |||||||| || | || |||||||||||||| |||||| Sbjct: 1011 ttgagtgtaaccatgccacgctctctggtcacacttgtcatcacgagcttgaaactgcaa 1070 Query: 593 gcattaatgacattcttggaaacattgatgcaaacactgg 632 | ||||||| | ||||| |||||||||||||| ||||| Sbjct: 1071 gaattaatggtttacttggcaacattgatgcaaatactgg 1110 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 427 gagcctaagccacaagaaccaacaaagcatcagtatgactgggatgttgcaac 479 ||||| ||||| |||||||| || ||||| |||||||||||||||| |||||| Sbjct: 905 gagcccaagcctcaagaacccaccaagcaccagtatgactgggatgctgcaac 957
>dbj|AB011482.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUA2 Length = 83478 Score = 81.8 bits (41), Expect = 3e-12 Identities = 131/161 (81%) Strand = Plus / Plus Query: 142 ccattatggggaactgcacaacttttcatgcatccacgttacatgcacggagctgctact 201 ||||| |||||||| || || |||||| ||||||| ||||| |||||||||| || || Sbjct: 79329 ccattgtggggaacagctcagcttttcttgcatcctcgttatatgcacggaggagcgacc 79388 Query: 202 agcccagaggtcaaggtgtatgcttatgctgctgctcaagtgaagaaagctttggaggtt 261 ||| | || || ||||||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 79389 agctctgaagttggagtgtatgcttacgctgctgctcaggtgaagaaagccatggaggta 79448 Query: 262 actcactacctaggcggtgagaactacgtattctggggtgg 302 || || ||| |||| ||||| |||||||| || |||||||| Sbjct: 79449 acacattacttaggtggtgaaaactacgttttttggggtgg 79489 Score = 71.9 bits (36), Expect = 3e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 533 ttgagtgcaaccatgctactctctctggacatagctgccatcacgagcttgagactgcac 592 ||||||| |||||||| || |||||||| || | || |||||||||||||| |||||| Sbjct: 79797 ttgagtgtaaccatgccacgctctctggtcacacttgtcatcacgagcttgaaactgcaa 79856 Query: 593 gcattaatgacattcttggaaacattgatgcaaacactgg 632 | ||||||| | ||||| |||||||||||||||||||| Sbjct: 79857 gaattaatggtttacttggcaacattgatgcaaacactgg 79896 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 427 gagcctaagccacaagaaccaacaaagcatcagtatgactgggatgttgcaac 479 ||||| ||||| |||||||| || ||||| |||||||||||||||| |||||| Sbjct: 79691 gagcccaagcctcaagaacccaccaagcaccagtatgactgggatgctgcaac 79743
>emb|BX834102.1|CNS0A1T5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL9ZA09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1087 Score = 75.8 bits (38), Expect = 2e-10 Identities = 74/86 (86%) Strand = Plus / Plus Query: 217 gtgtatgcttatgctgctgctcaagtgaagaaagctttggaggttactcactacctaggc 276 ||||||||||| ||||||||||| ||||||||||| ||||||| || || ||| |||| Sbjct: 149 gtgtatgcttacgctgctgctcaggtgaagaaagccatggaggtaacacattacttaggt 208 Query: 277 ggtgagaactacgtattctggggtgg 302 ||||| |||||||| || |||||||| Sbjct: 209 ggtgaaaactacgttttttggggtgg 234 Score = 71.9 bits (36), Expect = 3e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 533 ttgagtgcaaccatgctactctctctggacatagctgccatcacgagcttgagactgcac 592 ||||||| |||||||| || |||||||| || | || |||||||||||||| |||||| Sbjct: 466 ttgagtgtaaccatgccacgctctctggtcacacttgtcatcacgagcttgaaactgcaa 525 Query: 593 gcattaatgacattcttggaaacattgatgcaaacactgg 632 | ||||||| | ||||| |||||||||||||||||||| Sbjct: 526 gaattaatggtttacttggcaacattgatgcaaacactgg 565 Score = 40.1 bits (20), Expect = 9.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 440 aagaaccaacaaagcatcagtatgactgggatgttgcaac 479 ||||||| || ||||| |||| ||||||||||| |||||| Sbjct: 373 aagaacccaccaagcaccagtttgactgggatgctgcaac 412
>emb|BX833713.1|CNS09Z3Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL72ZD05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 966 Score = 75.8 bits (38), Expect = 2e-10 Identities = 74/86 (86%) Strand = Plus / Plus Query: 217 gtgtatgcttatgctgctgctcaagtgaagaaagctttggaggttactcactacctaggc 276 ||||||||||| ||||||||||| ||||||||||| ||||||| || || ||| |||| Sbjct: 12 gtgtatgcttacgctgctgctcaggtgaagaaagccatggaggtaacacattacttaggt 71 Query: 277 ggtgagaactacgtattctggggtgg 302 ||||| |||||||| || |||||||| Sbjct: 72 ggtgaaaactacgttttttggggtgg 97 Score = 71.9 bits (36), Expect = 3e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 533 ttgagtgcaaccatgctactctctctggacatagctgccatcacgagcttgagactgcac 592 ||||||| |||||||| || |||||||| || | || |||||||||||||| |||||| Sbjct: 328 ttgagtgtaaccatgccacgctctctggtcacacttgtcatcacgagcttgaaactgcaa 387 Query: 593 gcattaatgacattcttggaaacattgatgcaaacactgg 632 | ||||||| | ||||| |||||||||||||||||||| Sbjct: 388 gaattaatggtttacttggcaacattgatgcaaacactgg 427 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 427 gagcctaagccacaagaaccaacaaagcatcagtatgactgggatgttgcaac 479 ||||| ||||| |||||||| || ||||| |||||||||||||||| |||||| Sbjct: 222 gagcccaagcctcaagaacccaccaagcaccagtatgactgggatgctgcaac 274
>dbj|AK221134.1| Arabidopsis thaliana mRNA for xylose isomerase, partial cds, clone: RAFL22-92-O10 Length = 886 Score = 71.9 bits (36), Expect = 3e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 533 ttgagtgcaaccatgctactctctctggacatagctgccatcacgagcttgagactgcac 592 ||||||| |||||||| || |||||||| || | || |||||||||||||| |||||| Sbjct: 192 ttgagtgtaaccatgccacgctctctggtcacacttgtcatcacgagcttgaaactgcaa 251 Query: 593 gcattaatgacattcttggaaacattgatgcaaacactgg 632 | ||||||| | ||||| |||||||||||||||||||| Sbjct: 252 gaattaatggtttacttggcaacattgatgcaaacactgg 291 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 427 gagcctaagccacaagaaccaacaaagcatcagtatgactgggatgttgcaac 479 ||||| ||||| |||||||| || ||||| |||||||||||||||| |||||| Sbjct: 86 gagcccaagcctcaagaacccaccaagcaccagtatgactgggatgctgcaac 138
>gb|AC127169.13| Medicago truncatula clone mth2-36n3, complete sequence Length = 124554 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 217 gtgtatgcttatgctgctgctcaagtgaagaaagctttggaggt 260 |||||||| |||||||| ||||||||||||||||| |||||||| Sbjct: 87554 gtgtatgcatatgctgcggctcaagtgaagaaagccttggaggt 87511 Score = 44.1 bits (22), Expect = 0.59 Identities = 28/30 (93%) Strand = Plus / Minus Query: 619 gatgcaaacactggtgatccacaagttggt 648 |||||||| ||||||||||| ||||||||| Sbjct: 86084 gatgcaaatactggtgatcctcaagttggt 86055 Score = 42.1 bits (21), Expect = 2.3 Identities = 42/49 (85%) Strand = Plus / Minus Query: 512 caggggaattcaagataaatgttgagtgcaaccatgctactctctctgg 560 ||||||||||||| | || |||||||||||||||| ||||| ||||| Sbjct: 86299 caggggaattcaaacttaacattgagtgcaaccatgccactctatctgg 86251
>gb|U21678.1|TSU21678 Thermoanaerobacterium sp. xylose isomerase (xylA) gene, complete cds Length = 1320 Score = 61.9 bits (31), Expect = 3e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 274 ggcggtgagaactacgtattctggggtggaagagagggttaccaaactcttctcaatac 332 ||||| || |||||||||||||||||||||||||| || || |||| ||||||||||| Sbjct: 541 ggcggcgaaaactacgtattctggggtggaagagaaggatatgaaacacttctcaatac 599
>gb|J05650.1|CLOXYL C.thermosulfurogenes xylose isomerase (xylA) gene, complete cds Length = 1434 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 283 aactacgtattctggggtggaagagagggttaccaaactcttctcaataccgatatg 339 |||||||||||||||||||||||||| || || | || ||||||||||| |||||| Sbjct: 628 aactacgtattctggggtggaagagaaggatatgagacacttctcaatacagatatg 684
>gb|L09699.1|TEOXYLOSE Thermoanaerobacterium saccharolyticum (clone xylA) xylose isomerase mRNA, complete cds Length = 1601 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 283 aactacgtattctggggtggaagagagggttaccaaactcttctcaataccgatatg 339 ||||||||||| |||||||||||||| || ||| | || ||||||||||| |||||| Sbjct: 711 aactacgtattttggggtggaagagaagggtacgagacgcttctcaatacagatatg 767
>gb|AF282944.1|AF282944 Thermoanaerobacter yonseii xylose/glucose isomerase (xylA) gene, complete cds; and xylulose kinase (xylB) gene, partial cds Length = 2236 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 433 aagccacaagaaccaacaaagcatcagtatgact 466 |||||| |||| |||||||||||||||||||||| Sbjct: 884 aagccaaaagagccaacaaagcatcagtatgact 917 Score = 48.1 bits (24), Expect = 0.038 Identities = 27/28 (96%) Strand = Plus / Plus Query: 281 agaactacgtattctggggtggaagaga 308 ||||||||||||| |||||||||||||| Sbjct: 732 agaactacgtattttggggtggaagaga 759
>gb|AC124959.11| Medicago truncatula clone mth2-23l11, complete sequence Length = 125883 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Minus Query: 602 acattcttggaaacattgatgcaa 625 |||||||||||||||||||||||| Sbjct: 85975 acattcttggaaacattgatgcaa 85952 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 602 acattcttggaaacattgatgcaa 625 |||||||||||||||||| ||||| Sbjct: 65889 acattcttggaaacattgttgcaa 65866
>gb|AE012533.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 441 of 460 of the complete genome Length = 6066 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Plus Query: 274 ggcggtgagaactacgtattctgggg 299 ||||| |||||||||||||||||||| Sbjct: 4029 ggcggcgagaactacgtattctgggg 4054
>gb|AC003096.3| Arabidopsis thaliana chromosome 2 clone T29F13 map ve016, complete sequence Length = 69817 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Minus Query: 338 tgaagagggaacttgaacatttggct 363 |||||||| ||||||||||||||||| Sbjct: 63174 tgaagaggtaacttgaacatttggct 63149
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Plus Query: 274 ggcggtgagaactacgtattctgggg 299 ||||| |||||||||||||||||||| Sbjct: 4947533 ggcggcgagaactacgtattctgggg 4947558
>gb|AF020289.1|AF020289 Arabidopsis thaliana MgATP-energized glutathione S-conjugate pump (MRP2) gene, complete cds Length = 9650 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Plus Query: 338 tgaagagggaacttgaacatttggct 363 |||||||| ||||||||||||||||| Sbjct: 6229 tgaagaggtaacttgaacatttggct 6254
>gb|M91248.1|CLODXYISO C. thermosaccharolyticum D-xylose isomerase (xylA) gene, complete cds Length = 1488 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Plus Query: 283 aactacgtattctggggtggaagaga 308 ||||||||||||||||| |||||||| Sbjct: 685 aactacgtattctggggcggaagaga 710
>gb|CP000025.1| Campylobacter jejuni RM1221, complete genome Length = 1777831 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 244 aagaaagctttggaggttact 264 ||||||||||||||||||||| Sbjct: 177523 aagaaagctttggaggttact 177543
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 292 ttctggggtggaagagagggt 312 ||||||||||||||||||||| Sbjct: 2205509 ttctggggtggaagagagggt 2205489
>gb|AC007364.3| Homo sapiens BAC clone RP11-329H24 from 2, complete sequence Length = 200908 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 503 ttggtcttacaggggaattca 523 ||||||||||||||||||||| Sbjct: 51281 ttggtcttacaggggaattca 51261
>emb|AL139074.2|CJ11168X1 Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome; segment 1/6 Length = 314150 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 244 aagaaagctttggaggttact 264 ||||||||||||||||||||| Sbjct: 179494 aagaaagctttggaggttact 179514
>gb|AC145392.2| Mus musculus BAC clone RP24-171E5 from chromosome Y, complete sequence Length = 162238 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 518 aattcaagataaatgttgag 537 |||||||||||||||||||| Sbjct: 44781 aattcaagataaatgttgag 44800
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 9.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 422 tgatagagcctaagccacaagaaccaacaaagcatcagta 461 |||||||||| |||||||| || || || ||||||||||| Sbjct: 3459542 tgatagagcccaagccacaggagccgaccaagcatcagta 3459581
>emb|CR955037.3| Pan troglodytes chromosome X BAC RP43-016I09, complete sequence Length = 201964 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 aacaaagcatcagtatgact 466 |||||||||||||||||||| Sbjct: 57010 aacaaagcatcagtatgact 57029
>gb|AC132302.3| Mus musculus BAC clone RP24-279N5 from chromosome 3, complete sequence Length = 157307 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 tttcttcaagctgctgttaa 386 |||||||||||||||||||| Sbjct: 95972 tttcttcaagctgctgttaa 95953
>gb|AC149303.10| Medicago truncatula clone mth2-76a20, complete sequence Length = 141028 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 73 gaaacaaatgctaacttggatgag 96 |||||||||||||| ||||||||| Sbjct: 137351 gaaacaaatgctaagttggatgag 137328
>emb|AL050403.16|HSDJ697P8 Human DNA sequence from clone RP4-697P8 on chromosome 20 Contains two novel genes and the FAT1P1 gene for FAT tumour suppressor homolog 1 (Drosophila) pseudogene 1, complete sequence Length = 144924 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 ctgcacaacttttcatgcat 174 |||||||||||||||||||| Sbjct: 89157 ctgcacaacttttcatgcat 89138
>gb|AC103688.4| Homo sapiens chromosome 8, clone CTD-3046C4, complete sequence Length = 211222 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 ctgctgctcaagtgaagaaa 249 |||||||||||||||||||| Sbjct: 98256 ctgctgctcaagtgaagaaa 98237
>emb|AL662882.13| Mouse DNA sequence from clone RP23-187N13 on chromosome 11, complete sequence Length = 222359 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 616 attgatgcaaacactggtga 635 |||||||||||||||||||| Sbjct: 56525 attgatgcaaacactggtga 56506
>emb|CR855279.1| Human DNA sequence from clone XX-NCIH2171_16D15, complete sequence Length = 122131 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 ctgctgctcaagtgaagaaa 249 |||||||||||||||||||| Sbjct: 78326 ctgctgctcaagtgaagaaa 78307
>gb|AC156615.7| Mus musculus chromosome 3, clone RP23-1B20, complete sequence Length = 210003 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 tttcttcaagctgctgttaa 386 |||||||||||||||||||| Sbjct: 177195 tttcttcaagctgctgttaa 177176
>emb|BX510928.5| Zebrafish DNA sequence from clone DKEY-190G11 in linkage group 8, complete sequence Length = 197947 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 ttaccaaactcttctcaata 331 |||||||||||||||||||| Sbjct: 187101 ttaccaaactcttctcaata 187082
>dbj|AB224978.1| Aspergillus oryzae cDNA, contig sequence: AoEST1829 Length = 605 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 617 ttgatgcaaacactggtgat 636 |||||||||||||||||||| Sbjct: 535 ttgatgcaaacactggtgat 516
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 617 ttgatgcaaacactggtgat 636 |||||||||||||||||||| Sbjct: 2014267 ttgatgcaaacactggtgat 2014248
>gb|AC006065.3| Homo sapiens 12q24.2 BAC RPCI11-407A16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 191134 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 523 aagataaatgttgagtgcaa 542 |||||||||||||||||||| Sbjct: 122463 aagataaatgttgagtgcaa 122482
>gb|AC079177.21| Homo sapiens Xp BAC RP11-147B14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 155533 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 aacaaagcatcagtatgact 466 |||||||||||||||||||| Sbjct: 68962 aacaaagcatcagtatgact 68943
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 tgtatgcttatgctgctgct 237 |||||||||||||||||||| Sbjct: 23453108 tgtatgcttatgctgctgct 23453127
>gb|AC096728.3| Homo sapiens BAC clone RP11-53C16 from 4, complete sequence Length = 82696 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 335 atatgaagagggaacttgaacatt 358 |||||||||||||| ||||||||| Sbjct: 12087 atatgaagagggaaattgaacatt 12064
>gb|AC145068.8| Mus musculus chromosome 8, clone RP23-197G5, complete sequence Length = 195178 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 529 aatgttgagtgcaaccatgc 548 |||||||||||||||||||| Sbjct: 190800 aatgttgagtgcaaccatgc 190819
>dbj|AP005385.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1791_B03 Length = 166214 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 tgtatgcttatgctgctgct 237 |||||||||||||||||||| Sbjct: 18791 tgtatgcttatgctgctgct 18810
>dbj|AP005293.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1653_F07, complete sequence Length = 110109 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 tgtatgcttatgctgctgct 237 |||||||||||||||||||| Sbjct: 71783 tgtatgcttatgctgctgct 71802
>gb|AC006584.12|AC006584 Mus musculus BAC GSMB-407A4 (Genome Systems Mouse BAC Library) complete sequence Length = 160288 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 518 aattcaagataaatgttgag 537 |||||||||||||||||||| Sbjct: 57896 aattcaagataaatgttgag 57877
>gb|AC108811.12| Mus musculus chromosome 8, clone RP23-284C19, complete sequence Length = 212270 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 529 aatgttgagtgcaaccatgc 548 |||||||||||||||||||| Sbjct: 40635 aatgttgagtgcaaccatgc 40654
>gb|AC170734.3| Sorex araneus clone SA_Ba-257D3, complete sequence Length = 122469 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 agctggcaaagcaactccag 123 |||||||||||||||||||| Sbjct: 103285 agctggcaaagcaactccag 103304
>gb|AC109606.11| Mus musculus strain C57BL/6J chromosome 5 clone rp23-113m20, complete sequence Length = 210959 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 cgtattctggggtggaagagaggg 311 |||||||| ||||||||||||||| Sbjct: 115836 cgtattcttgggtggaagagaggg 115859
>dbj|D00756.1|CLOXYLA Clostridium thermohydrosulfuricum xylA gene for D-xylose ketol-isomerase, complete cds Length = 1476 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 281 agaactacgtattctggggtggaagaga 308 ||||||| ||||| |||||||||||||| Sbjct: 653 agaactatgtattttggggtggaagaga 680
>gb|AE000512.1| Thermotoga maritima MSB8, complete genome Length = 1860725 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 285 ctacgtattctggggtggaagaga 308 |||||| ||||||||||||||||| Sbjct: 1654011 ctacgtcttctggggtggaagaga 1654034
>gb|AF001974.1|AF001974 Thermoanaerobacter ethanolicus putative TrkG gene, partial cds, and putative TrkA, xylose isomerase (xylA) and xylulose kinase (xylB) genes, complete cds Length = 5271 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 281 agaactacgtattctggggtggaagaga 308 ||||||| ||||| |||||||||||||| Sbjct: 2615 agaactatgtattttggggtggaagaga 2642
>gb|L38994.1|TMOXYLA Thermotoga neapolitana 5068 xylose isomerase (xylA) gene, complete cds Length = 2522 Score = 40.1 bits (20), Expect = 9.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 286 tacgtattctggggtggaagagagggttaccaaactcttctcaa 329 ||||| ||||||||||||||||| || ||| |||| || ||||| Sbjct: 1168 tacgtcttctggggtggaagagaaggatacgaaacactcctcaa 1211 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,878,485 Number of Sequences: 3902068 Number of extensions: 5878485 Number of successful extensions: 110077 Number of sequences better than 10.0: 64 Number of HSP's better than 10.0 without gapping: 64 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 109770 Number of HSP's gapped (non-prelim): 297 length of query: 674 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 651 effective length of database: 17,143,297,704 effective search space: 11160286805304 effective search space used: 11160286805304 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
