ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd26k23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_190836.1| Oryza sativa (japonica cultivar-group), predic... 214 2e-52
2dbj|AK101857.1| Oryza sativa (japonica cultivar-group) cDNA clon... 214 2e-52
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
4dbj|AP003345.3| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
5gb|AY110805.1| Zea mays CL31502_1 mRNA sequence 68 4e-08
6emb|AL731735.14| Mouse DNA sequence from clone RP23-139P21 on ch... 42 2.1
7ref|XM_476313.1| Oryza sativa (japonica cultivar-group), predic... 40 8.2
8ref|XM_628961.1| Dictyostelium discoideum putative protein kinas... 40 8.2
9gb|AC016792.5| Drosophila melanogaster clone BACR26A02, complete... 40 8.2
10ref|XM_459012.1| Debaryomyces hansenii CBS767 hypothetical prote... 40 8.2
11gb|AC114409.17| Mus musculus chromosome 5, clone RP23-148F6, com... 40 8.2
12emb|Z50152.1|DMTRXIII D.melanogaster DNA for trxI and trxII genes 40 8.2
13emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS... 40 8.2
14emb|AJ229043.1| Homo sapiens 959 kb contig between AML1 and CBR1... 40 8.2
15ref|NM_142095.2| Drosophila melanogaster CG12207-RB, transcript ... 40 8.2
16gb|AF015262.2|AF015262 Homo sapiens chromosome 21 clone Pac 255P... 40 8.2
17dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
18gb|AC016993.4|AC016993 Homo sapiens clone RP11-18J9, complete se... 40 8.2
19gb|AC087433.4|AC087433 Homo sapiens chromosome 15 clone RP11-101... 40 8.2
20gb|AC007904.6|AC007904 Drosophila melanogaster, chromosome 3R, r... 40 8.2
21gb|AC154592.2| Mus musculus BAC clone RP23-249J17 from chromosom... 40 8.2
22gb|AC018880.6| Homo sapiens BAC clone RP11-336P15 from 2, comple... 40 8.2
23dbj|AP003334.4| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
24dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
25dbj|BS000195.1| Pan troglodytes chromosome 22 clone:PTB-014E11, ... 40 8.2
26dbj|BS000194.1| Pan troglodytes chromosome 22 clone:PTB-063M23, ... 40 8.2
27dbj|AB046473.2| Eurypharynx pelecanoides mitochondrial DNA, comp... 40 8.2
28emb|AL163267.2|HS21C067 Homo sapiens chromosome 21 segment HS21C067 40 8.2
29dbj|AK066933.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.2
30gb|AE003704.3| Drosophila melanogaster chromosome 3R, section 42... 40 8.2
31gb|U23446.1|DMU23446 Drosophila melanogaster trithorax gene, reg... 40 8.2
32dbj|AP001721.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 8.2
33dbj|AB012766.1| Oryza sativa gene for ovp2, complete cds 40 8.2
34dbj|D45384.1| Oryza sativa mRNA for vacuolar H+-pyrophosphatase,... 40 8.2 
>ref|NM_190836.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2862

 Score =  214 bits (108), Expect = 2e-52
 Identities = 240/284 (84%)
 Strand = Plus / Plus

                                                                        
Query: 61   atttcaggggaaattgaaattgaaaaggtccagactcataatgtggaatcaaggtcaaag 120
            |||||||| ||| ||||||| |||||| |||||||||  ||| | ||||| |||||||||
Sbjct: 2434 atttcaggtgaacttgaaatagaaaagctccagactcgcaatattgaatctaggtcaaag 2493

                                                                        
Query: 121  aatctcataccggtctttgagtctcttcacacatctaggtttcaacagacaagggtgaac 180
            ||||| ||||| || ||||| |||||||| ||||| |||||||||||| ||||||||| |
Sbjct: 2494 aatcttataccagtatttgaatctcttcatacatccaggtttcaacagtcaagggtgagc 2553

                                                                        
Query: 181  acacctgatagtaacagaagtgggtttctgcagcgacataagtctggattttcagcagat 240
            |||||||||||||||| |  ||| || || ||||| || ||||| ||||||||||  || 
Sbjct: 2554 acacctgatagtaacaaatatggattgcttcagcgtcaaaagtccggattttcagaggac 2613

                                                                        
Query: 241  ggtagactctcttccagaagcagttgtagttctttggattgcatgtctgaagtcccaaat 300
            ||||||||||| | ||||||||||| ||| |||||||| ||||||||||||| ||||| |
Sbjct: 2614 ggtagactctcctgcagaagcagttctagctctttggactgcatgtctgaaggcccaatt 2673

                                                        
Query: 301  agttccgatgataacagtgtcggtcaatatttagtagaagatag 344
            ||  | ||||||||  || | ||||||| |||||||||||||||
Sbjct: 2674 agcactgatgataatggttttggtcaatgtttagtagaagatag 2717



 Score =  107 bits (54), Expect = 4e-20
 Identities = 84/94 (89%)
 Strand = Plus / Plus

                                                                        
Query: 392  ccgagcttgtaaataacactgagagcctgaacacggaggcccagctcggagttgtaaata 451
            |||||||||||||||| ||| ||||||| ||||| ||||||||||||||| |||||||||
Sbjct: 2759 ccgagcttgtaaataatactcagagccttaacacagaggcccagctcggatttgtaaata 2818

                                              
Query: 452  gcaaagacgattgtgaagatagtgagctactccc 485
             |||||| ||||||||||| || |||| ||||||
Sbjct: 2819 acaaagaggattgtgaagacagagagcaactccc 2852
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>dbj|AK101857.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069O17, full
            insert sequence
          Length = 3412

 Score =  214 bits (108), Expect = 2e-52
 Identities = 240/284 (84%)
 Strand = Plus / Plus

                                                                        
Query: 61   atttcaggggaaattgaaattgaaaaggtccagactcataatgtggaatcaaggtcaaag 120
            |||||||| ||| ||||||| |||||| |||||||||  ||| | ||||| |||||||||
Sbjct: 2683 atttcaggtgaacttgaaatagaaaagctccagactcgcaatattgaatctaggtcaaag 2742

                                                                        
Query: 121  aatctcataccggtctttgagtctcttcacacatctaggtttcaacagacaagggtgaac 180
            ||||| ||||| || ||||| |||||||| ||||| |||||||||||| ||||||||| |
Sbjct: 2743 aatcttataccagtatttgaatctcttcatacatccaggtttcaacagtcaagggtgagc 2802

                                                                        
Query: 181  acacctgatagtaacagaagtgggtttctgcagcgacataagtctggattttcagcagat 240
            |||||||||||||||| |  ||| || || ||||| || ||||| ||||||||||  || 
Sbjct: 2803 acacctgatagtaacaaatatggattgcttcagcgtcaaaagtccggattttcagaggac 2862

                                                                        
Query: 241  ggtagactctcttccagaagcagttgtagttctttggattgcatgtctgaagtcccaaat 300
            ||||||||||| | ||||||||||| ||| |||||||| ||||||||||||| ||||| |
Sbjct: 2863 ggtagactctcctgcagaagcagttctagctctttggactgcatgtctgaaggcccaatt 2922

                                                        
Query: 301  agttccgatgataacagtgtcggtcaatatttagtagaagatag 344
            ||  | ||||||||  || | ||||||| |||||||||||||||
Sbjct: 2923 agcactgatgataatggttttggtcaatgtttagtagaagatag 2966



 Score =  107 bits (54), Expect = 4e-20
 Identities = 84/94 (89%)
 Strand = Plus / Plus

                                                                        
Query: 392  ccgagcttgtaaataacactgagagcctgaacacggaggcccagctcggagttgtaaata 451
            |||||||||||||||| ||| ||||||| ||||| ||||||||||||||| |||||||||
Sbjct: 3008 ccgagcttgtaaataatactcagagccttaacacagaggcccagctcggatttgtaaata 3067

                                              
Query: 452  gcaaagacgattgtgaagatagtgagctactccc 485
             |||||| ||||||||||| || |||| ||||||
Sbjct: 3068 acaaagaggattgtgaagacagagagcaactccc 3101
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  121 bits (61), Expect = 3e-24
 Identities = 145/173 (83%)
 Strand = Plus / Minus

                                                                            
Query: 172      agggtgaacacacctgatagtaacagaagtgggtttctgcagcgacataagtctggattt 231
                ||||||| ||||||||||||||||| |  ||| || || ||||| || ||||| ||||||
Sbjct: 33363127 agggtgagcacacctgatagtaacaaatatggattgcttcagcgtcaaaagtccggattt 33363068

                                                                            
Query: 232      tcagcagatggtagactctcttccagaagcagttgtagttctttggattgcatgtctgaa 291
                ||||  || ||||||||||| | ||||||||||| ||| |||||||| ||||||||||||
Sbjct: 33363067 tcagaggacggtagactctcctgcagaagcagttctagctctttggactgcatgtctgaa 33363008

                                                                     
Query: 292      gtcccaaatagttccgatgataacagtgtcggtcaatatttagtagaagatag 344
                | ||||| |||  | ||||||||  || | ||||||| |||||||||||||||
Sbjct: 33363007 ggcccaattagcactgatgataatggttttggtcaatgtttagtagaagatag 33362955



 Score =  107 bits (54), Expect = 4e-20
 Identities = 84/94 (89%)
 Strand = Plus / Minus

                                                                            
Query: 392      ccgagcttgtaaataacactgagagcctgaacacggaggcccagctcggagttgtaaata 451
                |||||||||||||||| ||| ||||||| ||||| ||||||||||||||| |||||||||
Sbjct: 33362913 ccgagcttgtaaataatactcagagccttaacacagaggcccagctcggatttgtaaata 33362854

                                                  
Query: 452      gcaaagacgattgtgaagatagtgagctactccc 485
                 |||||| ||||||||||| || |||| ||||||
Sbjct: 33362853 acaaagaggattgtgaagacagagagcaactccc 33362820



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 98/114 (85%)
 Strand = Plus / Minus

                                                                            
Query: 61       atttcaggggaaattgaaattgaaaaggtccagactcataatgtggaatcaaggtcaaag 120
                |||||||| ||| ||||||| |||||| |||||||||  ||| | ||||| |||||||||
Sbjct: 33363421 atttcaggtgaacttgaaatagaaaagctccagactcgcaatattgaatctaggtcaaag 33363362

                                                                      
Query: 121      aatctcataccggtctttgagtctcttcacacatctaggtttcaacagacaagg 174
                ||||| ||||| || ||||| |||||||| ||||| |||||||||||| |||||
Sbjct: 33363361 aatcttataccagtatttgaatctcttcatacatccaggtttcaacagtcaagg 33363308



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 49       gccactgataatatttcagg 68
                ||||||||||||||||||||
Sbjct: 21834659 gccactgataatatttcagg 21834678
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>dbj|AP003345.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0415A04
          Length = 160669

 Score =  121 bits (61), Expect = 3e-24
 Identities = 145/173 (83%)
 Strand = Plus / Minus

                                                                         
Query: 172   agggtgaacacacctgatagtaacagaagtgggtttctgcagcgacataagtctggattt 231
             ||||||| ||||||||||||||||| |  ||| || || ||||| || ||||| ||||||
Sbjct: 39293 agggtgagcacacctgatagtaacaaatatggattgcttcagcgtcaaaagtccggattt 39234

                                                                         
Query: 232   tcagcagatggtagactctcttccagaagcagttgtagttctttggattgcatgtctgaa 291
             ||||  || ||||||||||| | ||||||||||| ||| |||||||| ||||||||||||
Sbjct: 39233 tcagaggacggtagactctcctgcagaagcagttctagctctttggactgcatgtctgaa 39174

                                                                  
Query: 292   gtcccaaatagttccgatgataacagtgtcggtcaatatttagtagaagatag 344
             | ||||| |||  | ||||||||  || | ||||||| |||||||||||||||
Sbjct: 39173 ggcccaattagcactgatgataatggttttggtcaatgtttagtagaagatag 39121



 Score =  107 bits (54), Expect = 4e-20
 Identities = 84/94 (89%)
 Strand = Plus / Minus

                                                                         
Query: 392   ccgagcttgtaaataacactgagagcctgaacacggaggcccagctcggagttgtaaata 451
             |||||||||||||||| ||| ||||||| ||||| ||||||||||||||| |||||||||
Sbjct: 39079 ccgagcttgtaaataatactcagagccttaacacagaggcccagctcggatttgtaaata 39020

                                               
Query: 452   gcaaagacgattgtgaagatagtgagctactccc 485
              |||||| ||||||||||| || |||| ||||||
Sbjct: 39019 acaaagaggattgtgaagacagagagcaactccc 38986



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 98/114 (85%)
 Strand = Plus / Minus

                                                                         
Query: 61    atttcaggggaaattgaaattgaaaaggtccagactcataatgtggaatcaaggtcaaag 120
             |||||||| ||| ||||||| |||||| |||||||||  ||| | ||||| |||||||||
Sbjct: 39587 atttcaggtgaacttgaaatagaaaagctccagactcgcaatattgaatctaggtcaaag 39528

                                                                   
Query: 121   aatctcataccggtctttgagtctcttcacacatctaggtttcaacagacaagg 174
             ||||| ||||| || ||||| |||||||| ||||| |||||||||||| |||||
Sbjct: 39527 aatcttataccagtatttgaatctcttcatacatccaggtttcaacagtcaagg 39474
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>gb|AY110805.1| Zea mays CL31502_1 mRNA sequence
          Length = 923

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                       
Query: 391 gccgagcttgtaaataacactgagagcctgaacacggaggcccagctcggagttgtaaat 450
           ||||||||||||||||| |||| |||||| ||  | ||||||||||||||| ||||||||
Sbjct: 351 gccgagcttgtaaataatactgggagcctcaagtcagaggcccagctcggatttgtaaat 292

             
Query: 451 ag 452
           ||
Sbjct: 291 ag 290



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 208 ctgcagcgacataagtctggattttcagcagatggtagac 247
           ||||||||||| || |||||  |||||| |||||||||||
Sbjct: 528 ctgcagcgacagaaatctgggatttcagaagatggtagac 489
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>emb|AL731735.14| Mouse DNA sequence from clone RP23-139P21 on chromosome X, complete
              sequence
          Length = 201223

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 578    taactgttaattctttcattt 598
              |||||||||||||||||||||
Sbjct: 185559 taactgttaattctttcattt 185539
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>ref|XM_476313.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2304

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 516 atcactggttatggtcctggtgga 539
           |||||||||||||||| |||||||
Sbjct: 682 atcactggttatggtcttggtgga 705
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>ref|XM_628961.1| Dictyostelium discoideum putative protein kinase (DDB0229346),
           partial mRNA
          Length = 1188

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 578 taactgttaattctttcatt 597
           ||||||||||||||||||||
Sbjct: 259 taactgttaattctttcatt 240
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>gb|AC016792.5| Drosophila melanogaster clone BACR26A02, complete sequence
          Length = 164971

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 241    ggtagactctcttccagaag 260
              ||||||||||||||||||||
Sbjct: 149996 ggtagactctcttccagaag 150015
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>ref|XM_459012.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0D13684g)
            partial mRNA
          Length = 2628

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 66   aggggaaattgaaattgaaa 85
            ||||||||||||||||||||
Sbjct: 1563 aggggaaattgaaattgaaa 1544
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>gb|AC114409.17| Mus musculus chromosome 5, clone RP23-148F6, complete sequence
          Length = 222692

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 364   aataagaacttgaacgttaaccac 387
             |||||||||||||||| |||||||
Sbjct: 84311 aataagaacttgaacgctaaccac 84288
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>emb|Z50152.1|DMTRXIII D.melanogaster DNA for trxI and trxII genes
          Length = 26618

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 241 ggtagactctcttccagaag 260
           ||||||||||||||||||||
Sbjct: 621 ggtagactctcttccagaag 640
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>emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS767 of Debaryomyces
               hansenii
          Length = 1602771

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 66      aggggaaattgaaattgaaa 85
               ||||||||||||||||||||
Sbjct: 1046817 aggggaaattgaaattgaaa 1046798
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>emb|AJ229043.1| Homo sapiens 959 kb contig between AML1 and CBR1 on chromosome 21q22,
              segment 3/3
          Length = 288002

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 49     gccactgataatatttcagg 68
              ||||||||||||||||||||
Sbjct: 189976 gccactgataatatttcagg 189995
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>ref|NM_142095.2| Drosophila melanogaster CG12207-RB, transcript variant B (CG12207),
           mRNA
          Length = 2312

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 241 ggtagactctcttccagaag 260
           ||||||||||||||||||||
Sbjct: 146 ggtagactctcttccagaag 127
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>gb|AF015262.2|AF015262 Homo sapiens chromosome 21 clone Pac 255P7 map 21q-AML, complete
             sequence
          Length = 250598

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    gccactgataatatttcagg 68
             ||||||||||||||||||||
Sbjct: 98027 gccactgataatatttcagg 98008
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 516     atcactggttatggtcctggtgga 539
               |||||||||||||||| |||||||
Sbjct: 3932531 atcactggttatggtcttggtgga 3932554
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>gb|AC016993.4|AC016993 Homo sapiens clone RP11-18J9, complete sequence
          Length = 172241

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 74   ttgaaattgaaaaggtccagactc 97
            |||||| |||||||||||||||||
Sbjct: 6879 ttgaaactgaaaaggtccagactc 6856
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>gb|AC087433.4|AC087433 Homo sapiens chromosome 15 clone RP11-101J17 and RP11-501G11 map
             15q21.1, complete sequence
          Length = 185145

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 492   atgtcagtgacgttatcaaa 511
             ||||||||||||||||||||
Sbjct: 61832 atgtcagtgacgttatcaaa 61851
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>gb|AC007904.6|AC007904 Drosophila melanogaster, chromosome 3R, region 88B-88B, BAC clone
              BACR01H04, complete sequence
          Length = 190325

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 241    ggtagactctcttccagaag 260
              ||||||||||||||||||||
Sbjct: 169391 ggtagactctcttccagaag 169372
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>gb|AC154592.2| Mus musculus BAC clone RP23-249J17 from chromosome 14, complete
             sequence
          Length = 211647

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 195   cagaagtgggtttctgcagc 214
             ||||||||||||||||||||
Sbjct: 78046 cagaagtgggtttctgcagc 78065
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>gb|AC018880.6| Homo sapiens BAC clone RP11-336P15 from 2, complete sequence
          Length = 127025

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 364   aataagaacttgaacgttaaccaccaag 391
             |||||||| ||||| |||||||||||||
Sbjct: 84270 aataagaagttgaatgttaaccaccaag 84297
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>dbj|AP003334.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1114B07
          Length = 148060

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    gccactgataatatttcagg 68
             ||||||||||||||||||||
Sbjct: 63952 gccactgataatatttcagg 63971
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>dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0035I03
          Length = 153749

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 516   atcactggttatggtcctggtgga 539
             |||||||||||||||| |||||||
Sbjct: 38407 atcactggttatggtcttggtgga 38430
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>dbj|BS000195.1| Pan troglodytes chromosome 22 clone:PTB-014E11, map 22, complete
             sequences
          Length = 251753

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    gccactgataatatttcagg 68
             ||||||||||||||||||||
Sbjct: 27513 gccactgataatatttcagg 27494
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>dbj|BS000194.1| Pan troglodytes chromosome 22 clone:PTB-063M23, map 22, partial
              sequences, complete sequence
          Length = 147891

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 49     gccactgataatatttcagg 68
              ||||||||||||||||||||
Sbjct: 111556 gccactgataatatttcagg 111537
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>dbj|AB046473.2| Eurypharynx pelecanoides mitochondrial DNA, compete genome
          Length = 18978

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 378   cgttaaccaccaagccgagc 397
             ||||||||||||||||||||
Sbjct: 17553 cgttaaccaccaagccgagc 17572
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>emb|AL163267.2|HS21C067 Homo sapiens chromosome 21 segment HS21C067
          Length = 340000

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 49  gccactgataatatttcagg 68
           ||||||||||||||||||||
Sbjct: 101 gccactgataatatttcagg 82
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>dbj|AK066933.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091F19, full
           insert sequence
          Length = 2738

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 516 atcactggttatggtcctggtgga 539
           |||||||||||||||| |||||||
Sbjct: 791 atcactggttatggtcttggtgga 814
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>gb|AE003704.3| Drosophila melanogaster chromosome 3R, section 42 of 118 of the
             complete sequence
          Length = 220679

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 241   ggtagactctcttccagaag 260
             ||||||||||||||||||||
Sbjct: 29124 ggtagactctcttccagaag 29105
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>gb|U23446.1|DMU23446 Drosophila melanogaster trithorax gene, regulatory 5' region
          Length = 2927

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 241 ggtagactctcttccagaag 260
           ||||||||||||||||||||
Sbjct: 621 ggtagactctcttccagaag 640
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>dbj|AP001721.1| Homo sapiens genomic DNA, chromosome 21q, section 65/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 49     gccactgataatatttcagg 68
              ||||||||||||||||||||
Sbjct: 339101 gccactgataatatttcagg 339082
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>dbj|AB012766.1| Oryza sativa gene for ovp2, complete cds
          Length = 5985

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 516  atcactggttatggtcctggtgga 539
            |||||||||||||||| |||||||
Sbjct: 3411 atcactggttatggtcttggtgga 3434
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>dbj|D45384.1| Oryza sativa mRNA for vacuolar H+-pyrophosphatase, complete cds
          Length = 2710

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 516 atcactggttatggtcctggtgga 539
           |||||||||||||||| |||||||
Sbjct: 776 atcactggttatggtcttggtgga 799


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,981,544
Number of Sequences: 3902068
Number of extensions: 4981544
Number of successful extensions: 87985
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87842
Number of HSP's gapped (non-prelim): 143
length of query: 599
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 576
effective length of database: 17,143,297,704
effective search space: 9874539477504
effective search space used: 9874539477504
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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