ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd26k21 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_196821.1| Oryza sativa (japonica cultivar-group) putative PGPD14 protein (pollen germination related protein) (OSJNBa0018F16.5), mRNA Length = 1263 Score = 496 bits (250), Expect = e-137 Identities = 403/454 (88%) Strand = Plus / Plus Query: 152 gagcagcacggctgcgagcattacacgaggaggtgcaggatacgggcgccctgctgcggc 211 |||||||||||||||||||||||||||||| | |||||||| ||||||| ||||||||| Sbjct: 153 gagcagcacggctgcgagcattacacgaggggatgcaggatcagggcgccgtgctgcggc 212 Query: 212 gaggtcttcggctgccggcattgccacaaccaagctaagaattcgctcgaggtggacgtc 271 ||||| ||||||||| |||||||||||||| | || ||||||||||||||| | | || Sbjct: 213 gaggtgttcggctgcaggcattgccacaacgaggccaagaattcgctcgagatccatctc 272 Query: 272 ctcgaccggcacgacatcccccgccacgaaatcagcaaggtcatctgctctctctgcaac 331 ||||| ||||| ||||||||||||||||||| ||||| ||||||||||||||| || Sbjct: 273 aatgaccgtcacgagatcccccgccacgaaatcaagaaggttatctgctctctctgcgac 332 Query: 332 aaagaacaggatgtgcagaagaactgctccggttgtggggcatgcatggggaaatacttc 391 |||||||||||||| || || |||| || |||||||||||||||||||||||||||||| Sbjct: 333 aaagaacaggatgtacaacagtactgttctggttgtggggcatgcatggggaaatacttc 392 Query: 392 tgtgaaaaatgcaacttctttgacgatgatatctcaaagaaccagtatcactgcgatgga 451 || |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| Sbjct: 393 tgcgaaaaatgcaacttctttgatgatgatgtctcaaagaaccagtatcactgcgatgga 452 Query: 452 tgcggcatctgcagaactggtggcatggacaatttcttccactgcgaaaaatgcgggtgt 511 |||||||| |||||||||||||| |||| || ||||| |||||||| |||||||||||| Sbjct: 453 tgcggcatatgcagaactggtggtgtggataagttctttcactgcgacaaatgcgggtgt 512 Query: 512 tgctacagcaatgttttgaaggactctcatcattgtgtagagagagcaatgcatcaaaac 571 |||||||| ||||| |||| ||| |||||||| |||||||| ||||||||||||| ||| Sbjct: 513 tgctacagtaatgtcttgagggattctcatcactgtgtagaaggagcaatgcatcacaac 572 Query: 572 tgccctgtctgctacgagtatctatttgactcga 605 || |||||||||| |||||| ||||||||||||| Sbjct: 573 tgtcctgtctgcttcgagtacctatttgactcga 606
>dbj|AK104810.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-G01, full insert sequence Length = 1284 Score = 496 bits (250), Expect = e-137 Identities = 403/454 (88%) Strand = Plus / Plus Query: 152 gagcagcacggctgcgagcattacacgaggaggtgcaggatacgggcgccctgctgcggc 211 |||||||||||||||||||||||||||||| | |||||||| ||||||| ||||||||| Sbjct: 163 gagcagcacggctgcgagcattacacgaggggatgcaggatcagggcgccgtgctgcggc 222 Query: 212 gaggtcttcggctgccggcattgccacaaccaagctaagaattcgctcgaggtggacgtc 271 ||||| ||||||||| |||||||||||||| | || ||||||||||||||| | | || Sbjct: 223 gaggtgttcggctgcaggcattgccacaacgaggccaagaattcgctcgagatccatctc 282 Query: 272 ctcgaccggcacgacatcccccgccacgaaatcagcaaggtcatctgctctctctgcaac 331 ||||| ||||| ||||||||||||||||||| ||||| ||||||||||||||| || Sbjct: 283 aatgaccgtcacgagatcccccgccacgaaatcaagaaggttatctgctctctctgcgac 342 Query: 332 aaagaacaggatgtgcagaagaactgctccggttgtggggcatgcatggggaaatacttc 391 |||||||||||||| || || |||| || |||||||||||||||||||||||||||||| Sbjct: 343 aaagaacaggatgtacaacagtactgttctggttgtggggcatgcatggggaaatacttc 402 Query: 392 tgtgaaaaatgcaacttctttgacgatgatatctcaaagaaccagtatcactgcgatgga 451 || |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| Sbjct: 403 tgcgaaaaatgcaacttctttgatgatgatgtctcaaagaaccagtatcactgcgatgga 462 Query: 452 tgcggcatctgcagaactggtggcatggacaatttcttccactgcgaaaaatgcgggtgt 511 |||||||| |||||||||||||| |||| || ||||| |||||||| |||||||||||| Sbjct: 463 tgcggcatatgcagaactggtggtgtggataagttctttcactgcgacaaatgcgggtgt 522 Query: 512 tgctacagcaatgttttgaaggactctcatcattgtgtagagagagcaatgcatcaaaac 571 |||||||| ||||| |||| ||| |||||||| |||||||| ||||||||||||| ||| Sbjct: 523 tgctacagtaatgtcttgagggattctcatcactgtgtagaaggagcaatgcatcacaac 582 Query: 572 tgccctgtctgctacgagtatctatttgactcga 605 || |||||||||| |||||| ||||||||||||| Sbjct: 583 tgtcctgtctgcttcgagtacctatttgactcga 616
>dbj|AK072693.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023142C17, full insert sequence Length = 1095 Score = 496 bits (250), Expect = e-137 Identities = 403/454 (88%) Strand = Plus / Plus Query: 152 gagcagcacggctgcgagcattacacgaggaggtgcaggatacgggcgccctgctgcggc 211 |||||||||||||||||||||||||||||| | |||||||| ||||||| ||||||||| Sbjct: 164 gagcagcacggctgcgagcattacacgaggggatgcaggatcagggcgccgtgctgcggc 223 Query: 212 gaggtcttcggctgccggcattgccacaaccaagctaagaattcgctcgaggtggacgtc 271 ||||| ||||||||| |||||||||||||| | || ||||||||||||||| | | || Sbjct: 224 gaggtgttcggctgcaggcattgccacaacgaggccaagaattcgctcgagatccatctc 283 Query: 272 ctcgaccggcacgacatcccccgccacgaaatcagcaaggtcatctgctctctctgcaac 331 ||||| ||||| ||||||||||||||||||| ||||| ||||||||||||||| || Sbjct: 284 aatgaccgtcacgagatcccccgccacgaaatcaagaaggttatctgctctctctgcgac 343 Query: 332 aaagaacaggatgtgcagaagaactgctccggttgtggggcatgcatggggaaatacttc 391 |||||||||||||| || || |||| || |||||||||||||||||||||||||||||| Sbjct: 344 aaagaacaggatgtacaacagtactgttctggttgtggggcatgcatggggaaatacttc 403 Query: 392 tgtgaaaaatgcaacttctttgacgatgatatctcaaagaaccagtatcactgcgatgga 451 || |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| Sbjct: 404 tgcgaaaaatgcaacttctttgatgatgatgtctcaaagaaccagtatcactgcgatgga 463 Query: 452 tgcggcatctgcagaactggtggcatggacaatttcttccactgcgaaaaatgcgggtgt 511 |||||||| |||||||||||||| |||| || ||||| |||||||| |||||||||||| Sbjct: 464 tgcggcatatgcagaactggtggtgtggataagttctttcactgcgacaaatgcgggtgt 523 Query: 512 tgctacagcaatgttttgaaggactctcatcattgtgtagagagagcaatgcatcaaaac 571 |||||||| ||||| |||| ||| |||||||| |||||||| ||||||||||||| ||| Sbjct: 524 tgctacagtaatgtcttgagggattctcatcactgtgtagaaggagcaatgcatcacaac 583 Query: 572 tgccctgtctgctacgagtatctatttgactcga 605 || |||||||||| |||||| ||||||||||||| Sbjct: 584 tgtcctgtctgcttcgagtacctatttgactcga 617
>dbj|AK071137.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023077E12, full insert sequence Length = 1283 Score = 496 bits (250), Expect = e-137 Identities = 403/454 (88%) Strand = Plus / Plus Query: 152 gagcagcacggctgcgagcattacacgaggaggtgcaggatacgggcgccctgctgcggc 211 |||||||||||||||||||||||||||||| | |||||||| ||||||| ||||||||| Sbjct: 167 gagcagcacggctgcgagcattacacgaggggatgcaggatcagggcgccgtgctgcggc 226 Query: 212 gaggtcttcggctgccggcattgccacaaccaagctaagaattcgctcgaggtggacgtc 271 ||||| ||||||||| |||||||||||||| | || ||||||||||||||| | | || Sbjct: 227 gaggtgttcggctgcaggcattgccacaacgaggccaagaattcgctcgagatccatctc 286 Query: 272 ctcgaccggcacgacatcccccgccacgaaatcagcaaggtcatctgctctctctgcaac 331 ||||| ||||| ||||||||||||||||||| ||||| ||||||||||||||| || Sbjct: 287 aatgaccgtcacgagatcccccgccacgaaatcaagaaggttatctgctctctctgcgac 346 Query: 332 aaagaacaggatgtgcagaagaactgctccggttgtggggcatgcatggggaaatacttc 391 |||||||||||||| || || |||| || |||||||||||||||||||||||||||||| Sbjct: 347 aaagaacaggatgtacaacagtactgttctggttgtggggcatgcatggggaaatacttc 406 Query: 392 tgtgaaaaatgcaacttctttgacgatgatatctcaaagaaccagtatcactgcgatgga 451 || |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| Sbjct: 407 tgcgaaaaatgcaacttctttgatgatgatgtctcaaagaaccagtatcactgcgatgga 466 Query: 452 tgcggcatctgcagaactggtggcatggacaatttcttccactgcgaaaaatgcgggtgt 511 |||||||| |||||||||||||| |||| || ||||| |||||||| |||||||||||| Sbjct: 467 tgcggcatatgcagaactggtggtgtggataagttctttcactgcgacaaatgcgggtgt 526 Query: 512 tgctacagcaatgttttgaaggactctcatcattgtgtagagagagcaatgcatcaaaac 571 |||||||| ||||| |||| ||| |||||||| |||||||| ||||||||||||| ||| Sbjct: 527 tgctacagtaatgtcttgagggattctcatcactgtgtagaaggagcaatgcatcacaac 586 Query: 572 tgccctgtctgctacgagtatctatttgactcga 605 || |||||||||| |||||| ||||||||||||| Sbjct: 587 tgtcctgtctgcttcgagtacctatttgactcga 620
>gb|BT016752.1| Zea mays clone Contig585 mRNA sequence Length = 1421 Score = 278 bits (140), Expect = 2e-71 Identities = 341/408 (83%) Strand = Plus / Plus Query: 196 ggcgccctgctgcggcgaggtcttcggctgccggcattgccacaaccaagctaagaattc 255 |||||||||||||||| ||| |||||||||||| |||||||||||| | || ||||| || Sbjct: 382 ggcgccctgctgcggccaggccttcggctgccgccattgccacaacgacgccaagaactc 441 Query: 256 gctcgaggtggacgtcctcgaccggcacgacatcccccgccacgaaatcagcaaggtcat 315 ||| ||||| ||| | |||||||||||| ||||||||||||||||| | ||||| || Sbjct: 442 gctggaggtcgacccgcgcgaccggcacgagatcccccgccacgaaataaagaaggtgat 501 Query: 316 ctgctctctctgcaacaaagaacaggatgtgcagaagaactgctccggttgtggggcatg 375 ||| ||||||||| |||||||||||| ||||| ||||||||||| | |||||||| || Sbjct: 502 ctgttctctctgctccaaagaacaggacgtgcaacagaactgctccagctgtggggcctg 561 Query: 376 catggggaaatacttctgtgaaaaatgcaacttctttgacgatgatatctcaaagaacca 435 |||||| || ||||||||| || |||||| ||||| || |||||| |||||||| ||| Sbjct: 562 catgggcaagtacttctgtaaagtatgcaagttcttcgatgatgatgtctcaaagggcca 621 Query: 436 gtatcactgcgatggatgcggcatctgcagaactggtggcatggacaatttcttccactg 495 ||| ||||| || ||||| || || || |||||||| ||| |||| || || |||||||| Sbjct: 622 gtaccactgtgacggatgtggaatatgtagaactggcggcgtggagaactttttccactg 681 Query: 496 cgaaaaatgcgggtgttgctacagcaatgttttgaaggactctcatcattgtgtagagag 555 || ||||| |||||||| ||||||||||| |||||||| || || || || || || || Sbjct: 682 tgataaatgtgggtgttgttacagcaatgtcttgaaggattcccaccactgcgtggaaag 741 Query: 556 agcaatgcatcaaaactgccctgtctgctacgagtatctatttgactc 603 |||||||||||| |||||||| ||||||| ||||||||| || ||||| Sbjct: 742 agcaatgcatcacaactgccccgtctgcttcgagtatctgttcgactc 789
>dbj|AK120297.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013051O08, full insert sequence Length = 2604 Score = 228 bits (115), Expect = 2e-56 Identities = 250/295 (84%) Strand = Plus / Plus Query: 309 aggtcatctgctctctctgcaacaaagaacaggatgtgcagaagaactgctccggttgtg 368 |||| |||||||||||||||||||||||||||||||| || || | |||||| ||||| Sbjct: 1675 aggttatctgctctctctgcaacaaagaacaggatgtacaacaggattgctccaattgtg 1734 Query: 369 gggcatgcatggggaaatacttctgtgaaaaatgcaacttctttgacgatgatatctcaa 428 |||||||| |||| ||||| ||||| | |||||||||||| | ||| || ||| | |||| Sbjct: 1735 gggcatgcttgggtaaatatttctgcgcaaaatgcaacttttatgatgacgatgtatcaa 1794 Query: 429 agaaccagtatcactgcgatggatgcggcatctgcagaactggtggcatggacaatttct 488 ||||||| | ||||||||||||||| ||||| |||||||||||||| || || |||| Sbjct: 1795 agaaccaatttcactgcgatggatgtggcatatgcagaactggtggtgcagagaacttct 1854 Query: 489 tccactgcgaaaaatgcgggtgttgctacagcaatgttttgaaggactctcatcattgtg 548 | ||||| || |||||||| || ||||||||| |||| ||||||| || |||||||||| Sbjct: 1855 ttcactgtgacaaatgcggatgctgctacagctatgtgctgaaggattcccatcattgtg 1914 Query: 549 tagagagagcaatgcatcaaaactgccctgtctgctacgagtatctatttgactc 603 | || ||||||||||| || ||||||||||| |||| |||||||||||||||||| Sbjct: 1915 tggaaagagcaatgcaccataactgccctgtatgcttcgagtatctatttgactc 1969 Score = 83.8 bits (42), Expect = 6e-13 Identities = 126/154 (81%) Strand = Plus / Plus Query: 152 gagcagcacggctgcgagcattacacgaggaggtgcaggatacgggcgccctgctgcggc 211 |||||| |||| |||| |||||||| ||||| |||| |||| ||||||||||||||||| Sbjct: 281 gagcagtacggatgcgtgcattacaggaggaaatgcaagataagggcgccctgctgcggc 340 Query: 212 gaggtcttcggctgccggcattgccacaaccaagctaagaattcgctcgaggtggacgtc 271 ||| |||||| ||| |||| ||||||||| |||| ||| | ||| | ||||| | || Sbjct: 341 gagatcttcgattgcaggcactgccacaacgaagcgaaggactcgttggaggtcagcatc 400 Query: 272 ctcgaccggcacgacatcccccgccacgaaatca 305 |||||||||||| ||||| ||||| ||||||| Sbjct: 401 agcgaccggcacgagatccctcgccatgaaatca 434
>ref|XM_476180.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 384 Score = 182 bits (92), Expect = 9e-43 Identities = 107/112 (95%) Strand = Plus / Plus Query: 354 actgctccggttgtggggcatgcatggggaaatacttctgtgaaaaatgcaacttctttg 413 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37 actgctctggttgtggggcatgcatggggaaatacttctgtgaaaaatgcaacttctttg 96 Query: 414 acgatgatatctcaaagaaccagtatcactgcgatggatgcggcatctgcag 465 | |||||| |||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 97 atgatgatgtctcaaagaaccagtatcactgtgatggatgcggcatatgcag 148 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 463 cagaactggtggcatggacaatttcttccactgcgaaaaatgcgg 507 |||||||||||| |||| || ||||| |||||||| |||||||| Sbjct: 236 cagaactggtggtgtggataagttctttcactgcgacaaatgcgg 280
>gb|AY105408.1| Zea mays PCO132099 mRNA sequence Length = 795 Score = 167 bits (84), Expect = 5e-38 Identities = 234/284 (82%) Strand = Plus / Plus Query: 320 tctctctgcaacaaagaacaggatgtgcagaagaactgctccggttgtggggcatgcatg 379 ||||||||| ||| |||||||| ||||| ||||||||||| | |||||||| |||||| Sbjct: 6 tctctctgctccaaggaacaggacgtgcaacagaactgctccagctgtggggcctgcatg 65 Query: 380 gggaaatacttctgtgaaaaatgcaacttctttgacgatgatatctcaaagaaccagtat 439 || || ||||||||| || |||||| ||||| || |||||| |||||||| |||||| Sbjct: 66 ggcaagtacttctgtaaagtatgcaagttcttcgatgatgatgtctcaaagggccagtac 125 Query: 440 cactgcgatggatgcggcatctgcagaactggtggcatggacaatttcttccactgcgaa 499 ||||| || ||||| || || || ||||| || ||| |||| || || |||||||| || Sbjct: 126 cactgtgacggatgtggaatatgtagaaccggcggcgtggagaactttttccactgtgat 185 Query: 500 aaatgcgggtgttgctacagcaatgttttgaaggactctcatcattgtgtagagagagca 559 ||||| |||||||||||||||||||| |||||||| || || || || || || |||||| Sbjct: 186 aaatgtgggtgttgctacagcaatgtcttgaaggattcccaccactgcgtcgaaagagca 245 Query: 560 atgcatcaaaactgccctgtctgctacgagtatctatttgactc 603 |||||||| |||||||| ||||||| |||||||| || ||||| Sbjct: 246 atgcatcacaactgccccgtctgctttgagtatctgttcgactc 289
>gb|BT009109.1| Triticum aestivum clone wl1.pk0003.h12:fis, full insert mRNA sequence Length = 1084 Score = 123 bits (62), Expect = 7e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 422 atctcaaagaaccagtatcactgcgatggatgcggcatctgcagaactggtggcatggac 481 ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 107 atctcaaagaagcagtatcactacgatggatgcggcatctgcagaactggtggcatggac 166 Query: 482 aatttcttccactg 495 || ||||||||||| Sbjct: 167 aacttcttccactg 180
>gb|AC137001.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0012L23, complete sequence Length = 121659 Score = 119 bits (60), Expect = 1e-23 Identities = 66/68 (97%) Strand = Plus / Plus Query: 354 actgctccggttgtggggcatgcatggggaaatacttctgtgaaaaatgcaacttctttg 413 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5205 actgctctggttgtggggcatgcatggggaaatacttctgtgaaaaatgcaacttctttg 5264 Query: 414 acgatgat 421 | |||||| Sbjct: 5265 atgatgat 5272 Score = 69.9 bits (35), Expect = 9e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 423 tctcaaagaaccagtatcactgcgatggatgcggcatctgcag 465 |||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 5382 tctcaaagaaccagtatcactgtgatggatgcggcatatgcag 5424 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 463 cagaactggtggcatggacaatttcttccactgcgaaaaatgcgg 507 |||||||||||| |||| || ||||| |||||||| |||||||| Sbjct: 5512 cagaactggtggtgtggataagttctttcactgcgacaaatgcgg 5556
>gb|AC108498.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1076_H08, complete sequence Length = 148348 Score = 119 bits (60), Expect = 1e-23 Identities = 66/68 (97%) Strand = Plus / Plus Query: 354 actgctccggttgtggggcatgcatggggaaatacttctgtgaaaaatgcaacttctttg 413 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100040 actgctctggttgtggggcatgcatggggaaatacttctgtgaaaaatgcaacttctttg 100099 Query: 414 acgatgat 421 | |||||| Sbjct: 100100 atgatgat 100107 Score = 69.9 bits (35), Expect = 9e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 423 tctcaaagaaccagtatcactgcgatggatgcggcatctgcag 465 |||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 100217 tctcaaagaaccagtatcactgtgatggatgcggcatatgcag 100259 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 463 cagaactggtggcatggacaatttcttccactgcgaaaaatgcgg 507 |||||||||||| |||| || ||||| |||||||| |||||||| Sbjct: 100347 cagaactggtggtgtggataagttctttcactgcgacaaatgcgg 100391
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 119 bits (60), Expect = 1e-23 Identities = 66/68 (97%) Strand = Plus / Plus Query: 354 actgctccggttgtggggcatgcatggggaaatacttctgtgaaaaatgcaacttctttg 413 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7145191 actgctctggttgtggggcatgcatggggaaatacttctgtgaaaaatgcaacttctttg 7145250 Query: 414 acgatgat 421 | |||||| Sbjct: 7145251 atgatgat 7145258 Score = 69.9 bits (35), Expect = 9e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 423 tctcaaagaaccagtatcactgcgatggatgcggcatctgcag 465 |||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 7145368 tctcaaagaaccagtatcactgtgatggatgcggcatatgcag 7145410 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 463 cagaactggtggcatggacaatttcttccactgcgaaaaatgcgg 507 |||||||||||| |||| || ||||| |||||||| |||||||| Sbjct: 7145498 cagaactggtggtgtggataagttctttcactgcgacaaatgcgg 7145542
>ref|XM_470211.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1050 Score = 109 bits (55), Expect = 1e-20 Identities = 103/119 (86%) Strand = Plus / Plus Query: 485 ttcttccactgcgaaaaatgcgggtgttgctacagcaatgttttgaaggactctcatcat 544 ||||| ||||| || |||||||| || ||||||||| |||| ||||||| || |||||| Sbjct: 547 ttctttcactgtgacaaatgcggatgctgctacagctatgtgctgaaggattcccatcat 606 Query: 545 tgtgtagagagagcaatgcatcaaaactgccctgtctgctacgagtatctatttgactc 603 ||||| || ||||||||||| || ||||||||||| |||| |||||||||||||||||| Sbjct: 607 tgtgtggaaagagcaatgcaccataactgccctgtatgcttcgagtatctatttgactc 665 Score = 93.7 bits (47), Expect = 6e-16 Identities = 83/95 (87%) Strand = Plus / Plus Query: 314 atctgctctctctgcaacaaagaacaggatgtgcagaagaactgctccggttgtggggca 373 |||||||||||||||||||||||||||||||| || || | |||||| |||||||||| Sbjct: 336 atctgctctctctgcaacaaagaacaggatgtacaacaggattgctccaattgtggggca 395 Query: 374 tgcatggggaaatacttctgtgaaaaatgcaactt 408 ||| |||| ||||| ||||| | |||||||||||| Sbjct: 396 tgcttgggtaaatatttctgcgcaaaatgcaactt 430
>gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0018F16, complete sequence Length = 179157 Score = 103 bits (52), Expect = 7e-19 Identities = 73/80 (91%) Strand = Plus / Minus Query: 162 gctgcgagcattacacgaggaggtgcaggatacgggcgccctgctgcggcgaggtcttcg 221 |||||||||||||||||||| | |||||||| ||||||| |||||||||||||| |||| Sbjct: 72889 gctgcgagcattacacgaggggatgcaggatcagggcgccgtgctgcggcgaggtgttcg 72830 Query: 222 gctgccggcattgccacaac 241 ||||| |||||||||||||| Sbjct: 72829 gctgcaggcattgccacaac 72810 Score = 103 bits (52), Expect = 7e-19 Identities = 58/60 (96%) Strand = Plus / Minus Query: 362 ggttgtggggcatgcatggggaaatacttctgtgaaaaatgcaacttctttgacgatgat 421 |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 71512 ggttgtggggcatgcatggggaaatacttctgcgaaaaatgcaacttctttgatgatgat 71453 Score = 87.7 bits (44), Expect = 4e-14 Identities = 74/84 (88%) Strand = Plus / Minus Query: 506 gggtgttgctacagcaatgttttgaaggactctcatcattgtgtagagagagcaatgcat 565 |||||||||||||| ||||| |||| ||| |||||||| |||||||| ||||||||||| Sbjct: 71025 gggtgttgctacagtaatgtcttgagggattctcatcactgtgtagaaggagcaatgcat 70966 Query: 566 caaaactgccctgtctgctacgag 589 || ||||| |||||||||| |||| Sbjct: 70965 cacaactgtcctgtctgcttcgag 70942 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Minus Query: 423 tctcaaagaaccagtatcactgcgatggatgcggcatctgcag 465 ||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 71324 tctcaaagaaccagtatcactgcgatggatgcggcatatgcag 71282 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 309 aggtcatctgctctctctgcaacaaagaacaggatgt 345 |||| ||||||||||||||| |||||||||||||||| Sbjct: 71687 aggttatctgctctctctgcgacaaagaacaggatgt 71651 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 275 gaccggcacgacatcccccgccacgaaatca 305 ||||| ||||| ||||||||||||||||||| Sbjct: 72636 gaccgtcacgagatcccccgccacgaaatca 72606 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Minus Query: 463 cagaactggtggcatggacaatttcttccactgcgaaaaatgcgg 507 |||||||||||| |||| || ||||| |||||||| |||||||| Sbjct: 71193 cagaactggtggtgtggataagttctttcactgcgacaaatgcgg 71149
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 103 bits (52), Expect = 7e-19 Identities = 73/80 (91%) Strand = Plus / Minus Query: 162 gctgcgagcattacacgaggaggtgcaggatacgggcgccctgctgcggcgaggtcttcg 221 |||||||||||||||||||| | |||||||| ||||||| |||||||||||||| |||| Sbjct: 16194000 gctgcgagcattacacgaggggatgcaggatcagggcgccgtgctgcggcgaggtgttcg 16193941 Query: 222 gctgccggcattgccacaac 241 ||||| |||||||||||||| Sbjct: 16193940 gctgcaggcattgccacaac 16193921 Score = 103 bits (52), Expect = 7e-19 Identities = 58/60 (96%) Strand = Plus / Minus Query: 362 ggttgtggggcatgcatggggaaatacttctgtgaaaaatgcaacttctttgacgatgat 421 |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 16192623 ggttgtggggcatgcatggggaaatacttctgcgaaaaatgcaacttctttgatgatgat 16192564 Score = 87.7 bits (44), Expect = 4e-14 Identities = 74/84 (88%) Strand = Plus / Minus Query: 506 gggtgttgctacagcaatgttttgaaggactctcatcattgtgtagagagagcaatgcat 565 |||||||||||||| ||||| |||| ||| |||||||| |||||||| ||||||||||| Sbjct: 16192136 gggtgttgctacagtaatgtcttgagggattctcatcactgtgtagaaggagcaatgcat 16192077 Query: 566 caaaactgccctgtctgctacgag 589 || ||||| |||||||||| |||| Sbjct: 16192076 cacaactgtcctgtctgcttcgag 16192053 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Minus Query: 423 tctcaaagaaccagtatcactgcgatggatgcggcatctgcag 465 ||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 16192435 tctcaaagaaccagtatcactgcgatggatgcggcatatgcag 16192393 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 309 aggtcatctgctctctctgcaacaaagaacaggatgt 345 |||| ||||||||||||||| |||||||||||||||| Sbjct: 16192798 aggttatctgctctctctgcgacaaagaacaggatgt 16192762 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 275 gaccggcacgacatcccccgccacgaaatca 305 ||||| ||||| ||||||||||||||||||| Sbjct: 16193747 gaccgtcacgagatcccccgccacgaaatca 16193717 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Minus Query: 463 cagaactggtggcatggacaatttcttccactgcgaaaaatgcgg 507 |||||||||||| |||| || ||||| |||||||| |||||||| Sbjct: 16192304 cagaactggtggtgtggataagttctttcactgcgacaaatgcgg 16192260
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 103 bits (52), Expect = 7e-19 Identities = 73/80 (91%) Strand = Plus / Minus Query: 162 gctgcgagcattacacgaggaggtgcaggatacgggcgccctgctgcggcgaggtcttcg 221 |||||||||||||||||||| | |||||||| ||||||| |||||||||||||| |||| Sbjct: 16202241 gctgcgagcattacacgaggggatgcaggatcagggcgccgtgctgcggcgaggtgttcg 16202182 Query: 222 gctgccggcattgccacaac 241 ||||| |||||||||||||| Sbjct: 16202181 gctgcaggcattgccacaac 16202162 Score = 103 bits (52), Expect = 7e-19 Identities = 58/60 (96%) Strand = Plus / Minus Query: 362 ggttgtggggcatgcatggggaaatacttctgtgaaaaatgcaacttctttgacgatgat 421 |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 16200864 ggttgtggggcatgcatggggaaatacttctgcgaaaaatgcaacttctttgatgatgat 16200805 Score = 87.7 bits (44), Expect = 4e-14 Identities = 74/84 (88%) Strand = Plus / Minus Query: 506 gggtgttgctacagcaatgttttgaaggactctcatcattgtgtagagagagcaatgcat 565 |||||||||||||| ||||| |||| ||| |||||||| |||||||| ||||||||||| Sbjct: 16200377 gggtgttgctacagtaatgtcttgagggattctcatcactgtgtagaaggagcaatgcat 16200318 Query: 566 caaaactgccctgtctgctacgag 589 || ||||| |||||||||| |||| Sbjct: 16200317 cacaactgtcctgtctgcttcgag 16200294 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Minus Query: 423 tctcaaagaaccagtatcactgcgatggatgcggcatctgcag 465 ||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 16200676 tctcaaagaaccagtatcactgcgatggatgcggcatatgcag 16200634 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 309 aggtcatctgctctctctgcaacaaagaacaggatgt 345 |||| ||||||||||||||| |||||||||||||||| Sbjct: 16201039 aggttatctgctctctctgcgacaaagaacaggatgt 16201003 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 275 gaccggcacgacatcccccgccacgaaatca 305 ||||| ||||| ||||||||||||||||||| Sbjct: 16201988 gaccgtcacgagatcccccgccacgaaatca 16201958 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Minus Query: 463 cagaactggtggcatggacaatttcttccactgcgaaaaatgcgg 507 |||||||||||| |||| || ||||| |||||||| |||||||| Sbjct: 16200545 cagaactggtggtgtggataagttctttcactgcgacaaatgcgg 16200501
>dbj|AK104287.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-D07, full insert sequence Length = 1252 Score = 83.8 bits (42), Expect = 6e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 156 agcacggctgcgagcattacacgaggaggtgcaggatacgggcgccctgctgcggcgagg 215 ||||||| ||||||||||||| |||||| |||| ||| |||||||||||||||||||| Sbjct: 190 agcacgggtgcgagcattacaggaggagatgcaagatcgtggcgccctgctgcggcgagg 249 Query: 216 tcttcggctgccggcattgccacaac 241 | |||| ||||| |||||||||||| Sbjct: 250 tgttcgcttgccgccattgccacaac 275
>dbj|AK104170.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-F09, full insert sequence Length = 1203 Score = 83.8 bits (42), Expect = 6e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 156 agcacggctgcgagcattacacgaggaggtgcaggatacgggcgccctgctgcggcgagg 215 ||||||| ||||||||||||| |||||| |||| ||| |||||||||||||||||||| Sbjct: 193 agcacgggtgcgagcattacaggaggagatgcaagatcgtggcgccctgctgcggcgagg 252 Query: 216 tcttcggctgccggcattgccacaac 241 | |||| ||||| |||||||||||| Sbjct: 253 tgttcgcttgccgccattgccacaac 278
>dbj|AK069502.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020D18, full insert sequence Length = 1306 Score = 83.8 bits (42), Expect = 6e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 156 agcacggctgcgagcattacacgaggaggtgcaggatacgggcgccctgctgcggcgagg 215 ||||||| ||||||||||||| |||||| |||| ||| |||||||||||||||||||| Sbjct: 212 agcacgggtgcgagcattacaggaggagatgcaagatcgtggcgccctgctgcggcgagg 271 Query: 216 tcttcggctgccggcattgccacaac 241 | |||| ||||| |||||||||||| Sbjct: 272 tgttcgcttgccgccattgccacaac 297
>dbj|AK059316.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-H03, full insert sequence Length = 1334 Score = 83.8 bits (42), Expect = 6e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 156 agcacggctgcgagcattacacgaggaggtgcaggatacgggcgccctgctgcggcgagg 215 ||||||| ||||||||||||| |||||| |||| ||| |||||||||||||||||||| Sbjct: 190 agcacgggtgcgagcattacaggaggagatgcaagatcgtggcgccctgctgcggcgagg 249 Query: 216 tcttcggctgccggcattgccacaac 241 | |||| ||||| |||||||||||| Sbjct: 250 tgttcgcttgccgccattgccacaac 275
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 164 tgcgagcattacacgaggaggtgcaggatacgggcgccctgctgcggcgaggtcttcggc 223 ||||||||||||| |||||| |||| ||| ||||||||||||||||||||| |||| Sbjct: 21490548 tgcgagcattacaggaggagatgcaagatcgtggcgccctgctgcggcgaggtgttcgct 21490607 Query: 224 tgccggcattgccacaac 241 ||||| |||||||||||| Sbjct: 21490608 tgccgccattgccacaac 21490625
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 164 tgcgagcattacacgaggaggtgcaggatacgggcgccctgctgcggcgaggtcttcggc 223 ||||||||||||| |||||| |||| ||| ||||||||||||||||||||| |||| Sbjct: 21418869 tgcgagcattacaggaggagatgcaagatcgtggcgccctgctgcggcgaggtgttcgct 21418928 Query: 224 tgccggcattgccacaac 241 ||||| |||||||||||| Sbjct: 21418929 tgccgccattgccacaac 21418946
>emb|AL844497.4|CNS08CAU Oryza sativa chromosome 12, . BAC OSJNBa0085B23 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 158019 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Minus Query: 164 tgcgagcattacacgaggaggtgcaggatacgggcgccctgctgcggcgaggtcttcggc 223 ||||||||||||| |||||| |||| ||| ||||||||||||||||||||| |||| Sbjct: 155341 tgcgagcattacaggaggagatgcaagatcgtggcgccctgctgcggcgaggtgttcgct 155282 Query: 224 tgccggcattgccacaac 241 ||||| |||||||||||| Sbjct: 155281 tgccgccattgccacaac 155264
>ref|NM_191787.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 900 Score = 73.8 bits (37), Expect = 6e-10 Identities = 118/145 (81%) Strand = Plus / Plus Query: 363 gttgtggggcatgcatggggaaatacttctgtgaaaaatgcaacttctttgacgatgata 422 ||||||| | |||||||||||| |||||||||||| ||||| ||||||| |||||| Sbjct: 371 gttgtggtgtatgcatggggaagtacttctgtgaagtgtgcaagctctttgatgatgatg 430 Query: 423 tctcaaagaaccagtatcactgcgatggatgcggcatctgcagaactggtggcatggaca 482 | ||||| | || ||||| ||| |||| || || || ||||||| |||||||| ||| | Sbjct: 431 tttcaaaacagcaatatcattgcaatggttgtggaatatgcagaattggtggcaaggaga 490 Query: 483 atttcttccactgcgaaaaatgcgg 507 ||||||| |||||| ||||||||| Sbjct: 491 atttctttcactgctcaaaatgcgg 515
>gb|AY574990.1| Oryza sativa (japonica cultivar-group) zinc finger protein (Tranpr) mRNA, complete cds Length = 1393 Score = 73.8 bits (37), Expect = 6e-10 Identities = 118/145 (81%) Strand = Plus / Plus Query: 363 gttgtggggcatgcatggggaaatacttctgtgaaaaatgcaacttctttgacgatgata 422 ||||||| | |||||||||||| |||||||||||| ||||| ||||||| |||||| Sbjct: 427 gttgtggtgtatgcatggggaagtacttctgtgaagtgtgcaagctctttgatgatgatg 486 Query: 423 tctcaaagaaccagtatcactgcgatggatgcggcatctgcagaactggtggcatggaca 482 | ||||| | || ||||| ||| |||| || || || ||||||| |||||||| ||| | Sbjct: 487 tttcaaaacagcaatatcattgcaatggttgtggaatatgcagaattggtggcaaggaga 546 Query: 483 atttcttccactgcgaaaaatgcgg 507 ||||||| |||||| ||||||||| Sbjct: 547 atttctttcactgctcaaaatgcgg 571
>dbj|AK068005.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130E06, full insert sequence Length = 1843 Score = 73.8 bits (37), Expect = 6e-10 Identities = 118/145 (81%) Strand = Plus / Plus Query: 363 gttgtggggcatgcatggggaaatacttctgtgaaaaatgcaacttctttgacgatgata 422 ||||||| | |||||||||||| |||||||||||| ||||| ||||||| |||||| Sbjct: 734 gttgtggtgtatgcatggggaagtacttctgtgaagtgtgcaagctctttgatgatgatg 793 Query: 423 tctcaaagaaccagtatcactgcgatggatgcggcatctgcagaactggtggcatggaca 482 | ||||| | || ||||| ||| |||| || || || ||||||| |||||||| ||| | Sbjct: 794 tttcaaaacagcaatatcattgcaatggttgtggaatatgcagaattggtggcaaggaga 853 Query: 483 atttcttccactgcgaaaaatgcgg 507 ||||||| |||||| ||||||||| Sbjct: 854 atttctttcactgctcaaaatgcgg 878
>dbj|AK062155.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-H12, full insert sequence Length = 1692 Score = 73.8 bits (37), Expect = 6e-10 Identities = 118/145 (81%) Strand = Plus / Plus Query: 363 gttgtggggcatgcatggggaaatacttctgtgaaaaatgcaacttctttgacgatgata 422 ||||||| | |||||||||||| |||||||||||| ||||| ||||||| |||||| Sbjct: 617 gttgtggtgtatgcatggggaagtacttctgtgaagtgtgcaagctctttgatgatgatg 676 Query: 423 tctcaaagaaccagtatcactgcgatggatgcggcatctgcagaactggtggcatggaca 482 | ||||| | || ||||| ||| |||| || || || ||||||| |||||||| ||| | Sbjct: 677 tttcaaaacagcaatatcattgcaatggttgtggaatatgcagaattggtggcaaggaga 736 Query: 483 atttcttccactgcgaaaaatgcgg 507 ||||||| |||||| ||||||||| Sbjct: 737 atttctttcactgctcaaaatgcgg 761
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 69.9 bits (35), Expect = 9e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 164 tgcgagcattacacgaggaggtgcaggatacgggcgccctgctgcggcgaggtcttcggc 223 |||| |||||||| ||||| |||| |||| |||||||||||||||||||| |||||| Sbjct: 2531063 tgcgtgcattacaggaggaaatgcaagataagggcgccctgctgcggcgagatcttcgat 2531122 Query: 224 tgccggcattgccacaaccaagc 246 ||| |||| ||||||||| |||| Sbjct: 2531123 tgcaggcactgccacaacgaagc 2531145 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 168 agcattacacgaggaggtgcaggatacgggcgccctgctgcggcgaggtcttcggctgcc 227 |||| |||| ||||||||||||||| |||||||| |||||| ||| |||||| ||||| Sbjct: 13072459 agcactacaggaggaggtgcaggatccgggcgccgtgctgcaacgacgtcttccactgcc 13072400 Query: 228 ggcattgccacaac 241 | |||||||||||| Sbjct: 13072399 gccattgccacaac 13072386 Score = 67.9 bits (34), Expect = 4e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 512 tgctacagcaatgttttgaaggactctcatcattgtgtagagagagcaatgcatcaaaac 571 ||||||||| |||| ||||||| || ||||||||||| || ||||||||||| || ||| Sbjct: 2533162 tgctacagctatgtgctgaaggattcccatcattgtgtggaaagagcaatgcaccataac 2533221 Query: 572 tgccctgtctgctacgag 589 |||||||| |||| |||| Sbjct: 2533222 tgccctgtatgcttcgag 2533239 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 309 aggtcatctgctctctctgcaacaaagaacaggatgt 345 |||| |||||||||||||||||||||||||||||||| Sbjct: 2532540 aggttatctgctctctctgcaacaaagaacaggatgt 2532576 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 425 tcaaagaaccagtatcactgcgatggatgcggcatctgcag 465 ||||||||||| | ||||||||||||||| ||||| ||||| Sbjct: 2532908 tcaaagaaccaatttcactgcgatggatgtggcatatgcag 2532948 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 364 ttgtggggcatgcatggggaaatacttctgtgaaaaatgcaactt 408 ||||||||||||| |||| ||||| ||||| | |||||||||||| Sbjct: 2532723 ttgtggggcatgcttgggtaaatatttctgcgcaaaatgcaactt 2532767 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 ttcttccactgcgaaaaatg 504 |||||||||||||||||||| Sbjct: 13071691 ttcttccactgcgaaaaatg 13071672 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 274 cgaccggcacgacatcccccgccacgaaatca 305 |||||||||||| ||||| ||||| ||||||| Sbjct: 2531267 cgaccggcacgagatccctcgccatgaaatca 2531298
>gb|AC090485.3|AC090485 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0067N01, from chromosome 3, complete sequence Length = 159636 Score = 69.9 bits (35), Expect = 9e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 164 tgcgagcattacacgaggaggtgcaggatacgggcgccctgctgcggcgaggtcttcggc 223 |||| |||||||| ||||| |||| |||| |||||||||||||||||||| |||||| Sbjct: 139031 tgcgtgcattacaggaggaaatgcaagataagggcgccctgctgcggcgagatcttcgat 138972 Query: 224 tgccggcattgccacaaccaagc 246 ||| |||| ||||||||| |||| Sbjct: 138971 tgcaggcactgccacaacgaagc 138949 Score = 67.9 bits (34), Expect = 4e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 512 tgctacagcaatgttttgaaggactctcatcattgtgtagagagagcaatgcatcaaaac 571 ||||||||| |||| ||||||| || ||||||||||| || ||||||||||| || ||| Sbjct: 136932 tgctacagctatgtgctgaaggattcccatcattgtgtggaaagagcaatgcaccataac 136873 Query: 572 tgccctgtctgctacgag 589 |||||||| |||| |||| Sbjct: 136872 tgccctgtatgcttcgag 136855 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 309 aggtcatctgctctctctgcaacaaagaacaggatgt 345 |||| |||||||||||||||||||||||||||||||| Sbjct: 137554 aggttatctgctctctctgcaacaaagaacaggatgt 137518 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Minus Query: 364 ttgtggggcatgcatggggaaatacttctgtgaaaaatgcaactt 408 ||||||||||||| |||| ||||| ||||| | |||||||||||| Sbjct: 137371 ttgtggggcatgcttgggtaaatatttctgcgcaaaatgcaactt 137327 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 425 tcaaagaaccagtatcactgcgatggatgcggcatctgcag 465 ||||||||||| | ||||||||||||||| ||||| ||||| Sbjct: 137186 tcaaagaaccaatttcactgcgatggatgtggcatatgcag 137146 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 274 cgaccggcacgacatcccccgccacgaaatca 305 |||||||||||| ||||| ||||| ||||||| Sbjct: 138827 cgaccggcacgagatccctcgccatgaaatca 138796
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 69.9 bits (35), Expect = 9e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 164 tgcgagcattacacgaggaggtgcaggatacgggcgccctgctgcggcgaggtcttcggc 223 |||| |||||||| ||||| |||| |||| |||||||||||||||||||| |||||| Sbjct: 2531173 tgcgtgcattacaggaggaaatgcaagataagggcgccctgctgcggcgagatcttcgat 2531232 Query: 224 tgccggcattgccacaaccaagc 246 ||| |||| ||||||||| |||| Sbjct: 2531233 tgcaggcactgccacaacgaagc 2531255 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 168 agcattacacgaggaggtgcaggatacgggcgccctgctgcggcgaggtcttcggctgcc 227 |||| |||| ||||||||||||||| |||||||| |||||| ||| |||||| ||||| Sbjct: 13069234 agcactacaggaggaggtgcaggatccgggcgccgtgctgcaacgacgtcttccactgcc 13069175 Query: 228 ggcattgccacaac 241 | |||||||||||| Sbjct: 13069174 gccattgccacaac 13069161 Score = 67.9 bits (34), Expect = 4e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 512 tgctacagcaatgttttgaaggactctcatcattgtgtagagagagcaatgcatcaaaac 571 ||||||||| |||| ||||||| || ||||||||||| || ||||||||||| || ||| Sbjct: 2533272 tgctacagctatgtgctgaaggattcccatcattgtgtggaaagagcaatgcaccataac 2533331 Query: 572 tgccctgtctgctacgag 589 |||||||| |||| |||| Sbjct: 2533332 tgccctgtatgcttcgag 2533349 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 309 aggtcatctgctctctctgcaacaaagaacaggatgt 345 |||| |||||||||||||||||||||||||||||||| Sbjct: 2532650 aggttatctgctctctctgcaacaaagaacaggatgt 2532686 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 425 tcaaagaaccagtatcactgcgatggatgcggcatctgcag 465 ||||||||||| | ||||||||||||||| ||||| ||||| Sbjct: 2533018 tcaaagaaccaatttcactgcgatggatgtggcatatgcag 2533058 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 364 ttgtggggcatgcatggggaaatacttctgtgaaaaatgcaactt 408 ||||||||||||| |||| ||||| ||||| | |||||||||||| Sbjct: 2532833 ttgtggggcatgcttgggtaaatatttctgcgcaaaatgcaactt 2532877 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 ttcttccactgcgaaaaatg 504 |||||||||||||||||||| Sbjct: 13068466 ttcttccactgcgaaaaatg 13068447 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 274 cgaccggcacgacatcccccgccacgaaatca 305 |||||||||||| ||||| ||||| ||||||| Sbjct: 2531377 cgaccggcacgagatccctcgccatgaaatca 2531408
>gb|AC119796.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1172F09, complete sequence Length = 106057 Score = 69.9 bits (35), Expect = 9e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 164 tgcgagcattacacgaggaggtgcaggatacgggcgccctgctgcggcgaggtcttcggc 223 |||| |||||||| ||||| |||| |||| |||||||||||||||||||| |||||| Sbjct: 103559 tgcgtgcattacaggaggaaatgcaagataagggcgccctgctgcggcgagatcttcgat 103618 Query: 224 tgccggcattgccacaaccaagc 246 ||| |||| ||||||||| |||| Sbjct: 103619 tgcaggcactgccacaacgaagc 103641 Score = 67.9 bits (34), Expect = 4e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 512 tgctacagcaatgttttgaaggactctcatcattgtgtagagagagcaatgcatcaaaac 571 ||||||||| |||| ||||||| || ||||||||||| || ||||||||||| || ||| Sbjct: 105658 tgctacagctatgtgctgaaggattcccatcattgtgtggaaagagcaatgcaccataac 105717 Query: 572 tgccctgtctgctacgag 589 |||||||| |||| |||| Sbjct: 105718 tgccctgtatgcttcgag 105735 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 309 aggtcatctgctctctctgcaacaaagaacaggatgt 345 |||| |||||||||||||||||||||||||||||||| Sbjct: 105036 aggttatctgctctctctgcaacaaagaacaggatgt 105072 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 425 tcaaagaaccagtatcactgcgatggatgcggcatctgcag 465 ||||||||||| | ||||||||||||||| ||||| ||||| Sbjct: 105404 tcaaagaaccaatttcactgcgatggatgtggcatatgcag 105444 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 364 ttgtggggcatgcatggggaaatacttctgtgaaaaatgcaactt 408 ||||||||||||| |||| ||||| ||||| | |||||||||||| Sbjct: 105219 ttgtggggcatgcttgggtaaatatttctgcgcaaaatgcaactt 105263 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 274 cgaccggcacgacatcccccgccacgaaatca 305 |||||||||||| ||||| ||||| ||||||| Sbjct: 103763 cgaccggcacgagatccctcgccatgaaatca 103794
>gb|AC134231.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0006D11, complete sequence Length = 176637 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 168 agcattacacgaggaggtgcaggatacgggcgccctgctgcggcgaggtcttcggctgcc 227 |||| |||| ||||||||||||||| |||||||| |||||| ||| |||||| ||||| Sbjct: 150157 agcactacaggaggaggtgcaggatccgggcgccgtgctgcaacgacgtcttccactgcc 150098 Query: 228 ggcattgccacaac 241 | |||||||||||| Sbjct: 150097 gccattgccacaac 150084 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 ttcttccactgcgaaaaatg 504 |||||||||||||||||||| Sbjct: 149389 ttcttccactgcgaaaaatg 149370
>dbj|AK059950.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-B01, full insert sequence Length = 1059 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 168 agcattacacgaggaggtgcaggatacgggcgccctgctgcggcgaggtcttcggctgcc 227 |||| |||| ||||||||||||||| |||||||| |||||| ||| |||||| ||||| Sbjct: 101 agcactacaggaggaggtgcaggatccgggcgccgtgctgcaacgacgtcttccactgcc 160 Query: 228 ggcattgccacaac 241 | |||||||||||| Sbjct: 161 gccattgccacaac 174 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 452 tgcggcatctgcagaactggtggcatggacaatttcttccactgcgaaaaatg 504 ||||||||||||||| ||| || | ||| || |||||||||||||||||||| Sbjct: 364 tgcggcatctgcagagttggagggaaggataacttcttccactgcgaaaaatg 416
>gb|AY365035.1| Zea mays pollen germination-related protein-like mRNA sequence Length = 1106 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 314 atctgctctctctgcaacaaagaacaggatgt 345 |||||||||||||||||||||||||||||||| Sbjct: 13 atctgctctctctgcaacaaagaacaggatgt 44 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 428 aagaaccagtatcactgcgatggatgcggcatctgcagaactggtggc 475 |||||||| | |||||||||||| |||||||| ||||| ||||||||| Sbjct: 280 aagaaccaatttcactgcgatgggtgcggcatatgcaggactggtggc 327 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 555 gagcaatgcatcaaaactgccctgtctgctacgagtatctatttgactcga 605 |||| |||||||| ||||||||||||||| ||||||||||| ||||||| Sbjct: 407 gagctatgcatcacaactgccctgtctgcatggagtatctattcgactcga 457 Score = 40.1 bits (20), Expect = 8.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 383 aaatacttctgtgaaaaatgcaacttctttgacgatgata 422 ||||||||||| | |||||||||||||| ||||| |||| Sbjct: 179 aaatacttctgcgcgaaatgcaacttcttcgacgacgata 218
>dbj|AK073680.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033054M17, full insert sequence Length = 1232 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 168 agcattacacgaggaggtgcaggatacgggcgccctgctgcggcgaggtcttcggctgcc 227 |||| |||| ||||||||||| ||| |||||||| |||||| ||| |||||| ||||| Sbjct: 154 agcactacaggaggaggtgcacgatccgggcgccgtgctgcaacgacgtcttccactgcc 213 Query: 228 ggcattgccacaac 241 | |||||||||||| Sbjct: 214 gccattgccacaac 227 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Plus Query: 452 tgcggcatctgcagaactggtggcatggacaatttcttccactgcgaaaaatg 504 ||||||||||||| | ||| || | ||| || |||||||||||||||||||| Sbjct: 417 tgcggcatctgcatagttggagggaaggataacttcttccactgcgaaaaatg 469
>gb|AF049930.1|AF049930 Petunia x hybrida PGPD14 (PGPD14) mRNA, complete cds Length = 1620 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 544 ttgtgtagagagagcaatgcatcaaaactgccctgtctgctacgagtatctatttgac 601 ||||||||| ||||||||||| || || |||||||| |||| ||||||| | |||||| Sbjct: 649 ttgtgtagaaagagcaatgcaccataattgccctgtttgcttcgagtatgtttttgac 706
>gb|BC087404.1| Xenopus laevis hypothetical LOC496013, mRNA (cDNA clone MGC:99190 IMAGE:7207617), complete cds Length = 1181 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 428 aagaaccagtatcactgcgatggatgcggcatctgcag 465 ||||| ||||||||||| |||||||||||||| ||||| Sbjct: 473 aagaagcagtatcactgtgatggatgcggcatatgcag 510
>emb|CR859115.1| Pongo pygmaeus mRNA; cDNA DKFZp469L0620 (from clone DKFZp469L0620) Length = 3715 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 465 gaactggtggcatggacaatttctt 489 ||||||||||||||||||||||||| Sbjct: 2036 gaactggtggcatggacaatttctt 2012
>dbj|AK070809.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023072L02, full insert sequence Length = 2362 Score = 50.1 bits (25), Expect = 0.009 Identities = 91/113 (80%) Strand = Plus / Plus Query: 363 gttgtggggcatgcatggggaaatacttctgtgaaaaatgcaacttctttgacgatgata 422 ||||||| | |||||||||||| |||||||||||| ||||| ||||||| |||||| Sbjct: 2241 gttgtggtgtatgcatggggaagtacttctgtgaagtgtgcaagctctttgatgatgatg 2300 Query: 423 tctcaaagaaccagtatcactgcgatggatgcggcatctgcagaactggtggc 475 | ||||| | || ||||| ||| |||| || || || ||||||| ||||||| Sbjct: 2301 tttcaaaacagcaatatcattgcaatggttgtggaatatgcagaattggtggc 2353
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 363 gttgtggggcatgcatggggaaatacttctgtgaa 397 ||||||| | |||||||||||| |||||||||||| Sbjct: 29960765 gttgtggtgtatgcatggggaagtacttctgtgaa 29960731
>dbj|AP003453.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0480C01 Length = 151100 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 363 gttgtggggcatgcatggggaaatacttctgtgaa 397 ||||||| | |||||||||||| |||||||||||| Sbjct: 105323 gttgtggtgtatgcatggggaagtacttctgtgaa 105289
>gb|BT014163.1| Lycopersicon esculentum clone 133283F, mRNA sequence Length = 1881 Score = 44.1 bits (22), Expect = 0.53 Identities = 97/122 (79%) Strand = Plus / Plus Query: 374 tgcatggggaaatacttctgtgaaaaatgcaacttctttgacgatgatatctcaaagaac 433 |||||||||| ||| |||||||||| || || | ||||| |||||||| || || | Sbjct: 894 tgcatggggagatatttctgtgaaacgtgtaagctatttgatgatgatatatccaaaaga 953 Query: 434 cagtatcactgcgatggatgcggcatctgcagaactggtggcatggacaatttcttccac 493 |||||||||||| ||| || || || ||||| | |||||| ||||| || ||||||||| Sbjct: 954 cagtatcactgcagtggttgtgggatatgcaggattggtgggatggagaacttcttccac 1013 Query: 494 tg 495 || Sbjct: 1014 tg 1015
>emb|AL357315.14| Human DNA sequence from clone RP11-809N15 on chromosome 6 Contains a putative novel gene and a novel gene. Contains a CpG island, complete sequence Length = 121129 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 383 aaatacttctgtgaaaaatgca 404 |||||||||||||||||||||| Sbjct: 8042 aaatacttctgtgaaaaatgca 8063
>ref|XM_320050.2| Anopheles gambiae str. PEST ENSANGP00000012255 (ENSANGG00000009766), partial mRNA Length = 759 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Plus Query: 434 cagtatcactgcgatggatgcggcatctgc 463 ||||||||||| ||||| |||||||||||| Sbjct: 250 cagtatcactgtgatgggtgcggcatctgc 279
>gb|AY104238.1| Zea mays PCO120536 mRNA sequence Length = 1630 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 374 tgcatggggaaatacttctgtg 395 |||||||||||||||||||||| Sbjct: 1584 tgcatggggaaatacttctgtg 1605
>gb|AC134569.4| Mus musculus BAC clone RP24-240H21 from chromosome 16, complete sequence Length = 168794 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 acccccgcctccttcctctct 81 ||||||||||||||||||||| Sbjct: 110450 acccccgcctccttcctctct 110430
>ref|NM_170742.1| Homo sapiens potassium inwardly-rectifying channel, subfamily J, member 16 (KCNJ16), transcript variant 3, mRNA Length = 4025 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 tggtggcatggacaatttctt 489 ||||||||||||||||||||| Sbjct: 2338 tggtggcatggacaatttctt 2318
>ref|NM_170741.1| Homo sapiens potassium inwardly-rectifying channel, subfamily J, member 16 (KCNJ16), transcript variant 2, mRNA Length = 3926 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 tggtggcatggacaatttctt 489 ||||||||||||||||||||| Sbjct: 2250 tggtggcatggacaatttctt 2230
>ref|NM_018658.1| Homo sapiens potassium inwardly-rectifying channel, subfamily J, member 16 (KCNJ16), transcript variant 1, mRNA Length = 4021 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 tggtggcatggacaatttctt 489 ||||||||||||||||||||| Sbjct: 2331 tggtggcatggacaatttctt 2311
>gb|AC126007.16| Medicago truncatula clone mth2-11o4, complete sequence Length = 106747 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 543 attgtgtagagagagcaatgcatca 567 |||||||||| |||||||||||||| Sbjct: 89717 attgtgtagaaagagcaatgcatca 89741
>gb|BC033038.2| Homo sapiens potassium inwardly-rectifying channel, subfamily J, member 16, transcript variant 3, mRNA (cDNA clone MGC:33717 IMAGE:5262150), complete cds Length = 4024 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 tggtggcatggacaatttctt 489 ||||||||||||||||||||| Sbjct: 2337 tggtggcatggacaatttctt 2317
>gb|AF153816.1|AF153816 Homo sapiens clone 2 inwardly-rectifying potassium channel Kir5.1 (KCNJ16) mRNA, complete cds Length = 4021 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 tggtggcatggacaatttctt 489 ||||||||||||||||||||| Sbjct: 2331 tggtggcatggacaatttctt 2311
>gb|AF153814.1|AF153809S6 Homo sapiens inwardly-rectifying potassium channel Kir5.1 (KCNJ16) gene, exon 5 and complete cds, alternatively spliced Length = 3642 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 tggtggcatggacaatttctt 489 ||||||||||||||||||||| Sbjct: 1950 tggtggcatggacaatttctt 1930
>gb|AC005208.1|AC005208 Homo sapiens chromosome 17, clone hRPK.1064_E_11, complete sequence Length = 123211 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 tggtggcatggacaatttctt 489 ||||||||||||||||||||| Sbjct: 109128 tggtggcatggacaatttctt 109108
>gb|AC123064.3| Mus musculus BAC clone RP23-220P13 from chromosome 10, complete sequence Length = 186172 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 atgcaacttctttgacgatg 419 |||||||||||||||||||| Sbjct: 36571 atgcaacttctttgacgatg 36590
>gb|AC122847.4| Mus musculus BAC clone RP23-163F2 from 6, complete sequence Length = 193343 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 310 ggtcatctgctctctctgcaacaa 333 |||||| ||||||||||||||||| Sbjct: 87761 ggtcatatgctctctctgcaacaa 87738
>ref|XM_541048.2| PREDICTED: Canis familiaris similar to Galanin receptor type 1 (GAL1-R) (GALR1) (LOC483928), mRNA Length = 1056 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 gacccccgcctccttcctct 79 |||||||||||||||||||| Sbjct: 837 gacccccgcctccttcctct 856
>gb|AC152414.7| Mus musculus BAC clone RP23-358O14 from chromosome 10, complete sequence Length = 230322 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 atgcaacttctttgacgatg 419 |||||||||||||||||||| Sbjct: 170655 atgcaacttctttgacgatg 170674
>gb|AC157351.11| Mus musculus chromosome 5, clone RP23-219K16, complete sequence Length = 196331 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 61 acccccgcctccttcctctcttcc 84 ||||||||||||||||| |||||| Sbjct: 122125 acccccgcctccttcctttcttcc 122102 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,639,853 Number of Sequences: 3902068 Number of extensions: 4639853 Number of successful extensions: 117930 Number of sequences better than 10.0: 59 Number of HSP's better than 10.0 without gapping: 60 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 117429 Number of HSP's gapped (non-prelim): 501 length of query: 605 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 582 effective length of database: 17,143,297,704 effective search space: 9977399263728 effective search space used: 9977399263728 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
