ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd26k11 |
|---|---|
| Clone Library Name | barley_pub |
>INO80_CANAL (Q59KI4) Putative DNA helicase INO80 (EC 3.6.1.-)| Length = 1387 Score = 32.0 bits (71), Expect = 1.6 Identities = 29/120 (24%), Positives = 54/120 (45%) Frame = +3 Query: 201 SHLHVWASPLQAAEDYPFFPGQETTLRGDVDFLLQCMDEARVDGALIVQPINHMFDHSLV 380 +H V +SPL+ + D P ++L+ D + ++ + P ++ FD+S Sbjct: 90 NHQPVNSSPLKHSVDENSNPTTISSLKKDTNSIIAS-----------ILPESYQFDNSYT 138 Query: 381 TSVLQKYPSKFIGCCLANPADDGSGIKQLEHLIVQEKYRAVRFNPNLWPSGQKMTNEVGR 560 ++ QKY S F N + +Q+ H + K+ V+ N L +GQ +N + R Sbjct: 139 PTIDQKYKSVFES--NINVINQLDQYQQMGHHLKLMKFDEVKLNNYLINTGQFASNYIDR 196
>PURA_WOLPM (Q73I44) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 425 Score = 31.2 bits (69), Expect = 2.7 Identities = 23/64 (35%), Positives = 30/64 (46%) Frame = +3 Query: 399 YPSKFIGCCLANPADDGSGIKQLEHLIVQEKYRAVRFNPNLWPSGQKMTNEVGRSLFAKA 578 YP +A+ A GSG+ ++I K R +P+ QK NEVG SLF Sbjct: 235 YPFVTSSNTVASQAITGSGLSSNAYIIGVVKAYTTRVGNGPFPTEQK--NEVGDSLFTIG 292 Query: 579 GELG 590 ELG Sbjct: 293 KELG 296
>HEXA_CAEEL (Q22492) Probable beta-hexosaminidase A precursor (EC 3.2.1.52)| (N-acetyl-beta-glucosaminidase) (Beta-N-acetylhexosaminidase) Length = 555 Score = 31.2 bits (69), Expect = 2.7 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 5/58 (8%) Frame = +3 Query: 258 PGQETTLRGDVDFLLQCMDEARVDGAL--IVQPINHM---FDHSLVTSVLQKYPSKFI 416 PG ++ RG FL +C DE V+ L +V P+N F + V + +P +F+ Sbjct: 262 PGHTSSWRGRKGFLTECFDEKGVETFLPNLVDPMNEANFDFISEFLEEVTETFPDQFL 319
>ODP2_NEUCR (P20285) Dihydrolipoyllysine-residue acetyltransferase component of| pyruvate dehydrogenase complex, mitochondrial precursor (EC 2.3.1.12) (E2) (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex) (PDC-E2) (MRP3) Length = 458 Score = 30.8 bits (68), Expect = 3.5 Identities = 16/64 (25%), Positives = 29/64 (45%) Frame = -2 Query: 317 FIHTLEQEVHITPERRLLAREKGVILGSLQRRGPDVEVGVHDLARSXXXXXXXXXXXXXG 138 F LE+E + P + LAREKG+ L +++ GP ++ D+ ++ Sbjct: 168 FQTALEREPNALPAAKRLAREKGIDLRNVKGSGPGGKITEEDVKKALASAPAAGAAAAAY 227 Query: 137 EEQP 126 + P Sbjct: 228 TDVP 231
>ACO32_ARATH (Q9LMI7) Putative acyl-coenzyme A oxidase 3.2, peroxisomal| precursor (EC 1.3.3.6) Length = 675 Score = 30.0 bits (66), Expect = 6.0 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = -2 Query: 329 VNSSFIHTLEQEVHITPERRLLAREKGVILGSLQRRGPDVEV 204 V+ + T+EQ+ I+ +R EKGV G L GP+ E+ Sbjct: 89 VSPDYNQTMEQQRQISMKRIFYLLEKGVFQGWLTETGPEAEL 130
>ADH_DROSL (P23278) Alcohol dehydrogenase (EC 1.1.1.1)| Length = 253 Score = 30.0 bits (66), Expect = 6.0 Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 7/50 (14%) Frame = -3 Query: 133 SSLLLVAAGVGGIYDSRVREVVASGVRNLQV-------AAAADEEAINER 5 +S ++ AG+GGI RE+V SG +NL V AA A+ +A+N + Sbjct: 4 NSNIIFVAGLGGIGLDTSREIVKSGPKNLVVLDRIDNPAAIAELKALNPK 53
>ADH_DROPL (P23277) Alcohol dehydrogenase (EC 1.1.1.1)| Length = 253 Score = 30.0 bits (66), Expect = 6.0 Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 7/50 (14%) Frame = -3 Query: 133 SSLLLVAAGVGGIYDSRVREVVASGVRNLQV-------AAAADEEAINER 5 +S ++ AG+GGI RE+V SG +NL V AA A+ +A+N + Sbjct: 4 NSNIIFVAGLGGIGLDTSREIVKSGPKNLVVLDRVDNPAAIAELKALNPK 53
>ADH_DROHE (P21898) Alcohol dehydrogenase (EC 1.1.1.1)| Length = 253 Score = 30.0 bits (66), Expect = 6.0 Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 7/50 (14%) Frame = -3 Query: 133 SSLLLVAAGVGGIYDSRVREVVASGVRNLQV-------AAAADEEAINER 5 +S ++ AG+GGI RE+V SG +NL V AA A+ +A+N + Sbjct: 4 NSNIIFVAGLGGIGLDTSREIVKSGPKNLVVLDRIDNPAAIAELKALNPK 53
>ADH_DROGR (P51551) Alcohol dehydrogenase (EC 1.1.1.1)| Length = 253 Score = 30.0 bits (66), Expect = 6.0 Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 7/50 (14%) Frame = -3 Query: 133 SSLLLVAAGVGGIYDSRVREVVASGVRNLQV-------AAAADEEAINER 5 +S ++ AG+GGI RE+V SG +NL V AA A+ +A+N + Sbjct: 4 NSNIIFVAGLGGIGLDTSREIVKSGPKNLVVLDRVDNPAAIAELKALNPK 53
>ADH_DRODI (P22245) Alcohol dehydrogenase (EC 1.1.1.1)| Length = 253 Score = 30.0 bits (66), Expect = 6.0 Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 7/50 (14%) Frame = -3 Query: 133 SSLLLVAAGVGGIYDSRVREVVASGVRNLQV-------AAAADEEAINER 5 +S ++ AG+GGI RE+V SG +NL V AA A+ +A+N + Sbjct: 4 NSNIIFVAGLGGIGLDTSREIVKSGPKNLVVLDRVDNPAAIAELKALNPK 53
>DDL_LEUME (Q48745) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-alanylalanine| synthetase) (D-Ala-D-Ala ligase) Length = 377 Score = 29.6 bits (65), Expect = 7.9 Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 7/142 (4%) Frame = +3 Query: 228 LQAAEDYP-FFP------GQETTLRGDVDFLLQCMDEARVDGALIVQPINHMFDHSLVTS 386 L++A D+ FFP G++ TL+G L + +D+ V L ++ FD +L Sbjct: 88 LKSAGDFDIFFPVVHGNLGEDGTLQG----LFKLLDKPYVGAPLRGHAVS--FDKALTKE 141 Query: 387 VLQKYPSKFIGCCLANPADDGSGIKQLEHLIVQEKYRAVRFNPNLWPSGQKMTNEVGRSL 566 +L +GI+ ++++V + + N W S K+ E+G + Sbjct: 142 LLTV-----------------NGIRNTKYIVVDPE------SANNW-SWDKIVAELGNIV 177 Query: 567 FAKAGELGAPVGIMVMKGISSY 632 F KA G+ VGI + Y Sbjct: 178 FVKAANQGSSVGISRVTNAEEY 199
>PURA_WOLTR (Q5GT12) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 435 Score = 29.6 bits (65), Expect = 7.9 Identities = 21/64 (32%), Positives = 29/64 (45%) Frame = +3 Query: 399 YPSKFIGCCLANPADDGSGIKQLEHLIVQEKYRAVRFNPNLWPSGQKMTNEVGRSLFAKA 578 YP +A+ GSG+ ++I K R +P+ Q+ NEVG SLF Sbjct: 235 YPFVTSSNTIASQVMTGSGLSSNAYVIGVAKAYTTRVGNGPFPTEQR--NEVGNSLFTIG 292 Query: 579 GELG 590 ELG Sbjct: 293 KELG 296
>ADH_DROAF (P21518) Alcohol dehydrogenase (EC 1.1.1.1)| Length = 253 Score = 29.6 bits (65), Expect = 7.9 Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 7/50 (14%) Frame = -3 Query: 133 SSLLLVAAGVGGIYDSRVREVVASGVRNLQV-------AAAADEEAINER 5 +S ++ AG+GGI RE+V SG +NL V AA A+ +A+N + Sbjct: 4 NSNVIFVAGLGGIGLDTSREIVKSGPKNLVVLDRVDNPAAIAELKALNPK 53
>ADH2_DROHY (P23237) Alcohol dehydrogenase 2 (EC 1.1.1.1)| Length = 253 Score = 29.6 bits (65), Expect = 7.9 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 7/47 (14%) Frame = -3 Query: 124 LLVAAGVGGIYDSRVREVVASGVRNLQV-------AAAADEEAINER 5 ++ AG+GGI RE+V SG +NL + AA A+ +AIN + Sbjct: 7 IIFVAGLGGIGLDTSREIVKSGPKNLVILDRIDNPAAIAELKAINPK 53
>ADH1_DROHY (P23236) Alcohol dehydrogenase 1 (EC 1.1.1.1)| Length = 253 Score = 29.6 bits (65), Expect = 7.9 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 7/47 (14%) Frame = -3 Query: 124 LLVAAGVGGIYDSRVREVVASGVRNLQV-------AAAADEEAINER 5 ++ AG+GGI RE+V SG +NL + AA A+ +AIN + Sbjct: 7 IIFVAGLGGIGLDTSREIVKSGPKNLVILDRIDNPAAIAELKAINPK 53
>Y815_METJA (Q58225) Hypothetical protein MJ0815 precursor| Length = 308 Score = 29.6 bits (65), Expect = 7.9 Identities = 19/73 (26%), Positives = 38/73 (52%) Frame = +3 Query: 297 LLQCMDEARVDGALIVQPINHMFDHSLVTSVLQKYPSKFIGCCLANPADDGSGIKQLEHL 476 L + +D AL+V P + ++L T +++ YP K +GC ++ A +G K L +L Sbjct: 88 LKSLLKSENIDYALVVAPEDEDILYNL-TKIIESYPVKNLGC--SSEAIKIAGNKYLTYL 144 Query: 477 IVQEKYRAVRFNP 515 +++ + + P Sbjct: 145 AIKDAVKTPKTFP 157 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 83,356,801 Number of Sequences: 219361 Number of extensions: 1600145 Number of successful extensions: 4403 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 4273 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4399 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5938641176 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
