ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd26k03 |
|---|---|
| Clone Library Name | barley_pub |
>VDAC1_WHEAT (P46274) Outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) Length = 275 Score = 301 bits (770), Expect(2) = 5e-86 Identities = 153/162 (94%), Positives = 156/162 (96%) Frame = +2 Query: 86 MGGPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILGEIQSQIK 265 MGGPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANG AITATSTKKADL +GEIQSQIK Sbjct: 1 MGGPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGPAITATSTKKADLTVGEIQSQIK 60 Query: 266 NKNITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINAS 445 NKNITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINAS Sbjct: 61 NKNITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINAS 120 Query: 446 IGLTANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNACV 571 IGLTANPVVNLS AFGTSALAVG DVSLDT+TKNF KYNA + Sbjct: 121 IGLTANPVVNLSGAFGTSALAVGADVSLDTATKNFAKYNAAL 162 Score = 37.0 bits (84), Expect(2) = 5e-86 Identities = 17/18 (94%), Positives = 17/18 (94%) Frame = +3 Query: 567 AFSYTNQDLIASLNLNNK 620 A SYTNQDLIASLNLNNK Sbjct: 161 ALSYTNQDLIASLNLNNK 178
>VDAC1_ORYSA (Q6K548) Outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) Length = 273 Score = 260 bits (664), Expect(2) = 8e-72 Identities = 131/158 (82%), Positives = 143/158 (90%) Frame = +2 Query: 92 GPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILGEIQSQIKNK 271 GPGLY IGKKA+DLLYRDYQTDHKFTLTTYT+NG AITATSTKKADLI GEIQSQIKNK Sbjct: 2 GPGLYPEIGKKARDLLYRDYQTDHKFTLTTYTSNGVAITATSTKKADLIFGEIQSQIKNK 61 Query: 272 NITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIG 451 NITVDVKANS SNV+TT+T D+L PGLK+ILSFAVPDQ+SGK ELQY HDYAG++ASIG Sbjct: 62 NITVDVKANSDSNVVTTVTVDEL-TPGLKSILSFAVPDQRSGKFELQYSHDYAGVSASIG 120 Query: 452 LTANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNA 565 LTA+PVVNLS+ FGT ALAVG DVSLDT+T N TKYNA Sbjct: 121 LTASPVVNLSSVFGTKALAVGADVSLDTATGNLTKYNA 158 Score = 30.4 bits (67), Expect(2) = 8e-72 Identities = 13/16 (81%), Positives = 15/16 (93%) Frame = +3 Query: 573 SYTNQDLIASLNLNNK 620 S++N DLIASLNLNNK Sbjct: 161 SFSNDDLIASLNLNNK 176
>VDAC1_SOLTU (P42055) 34 kDa outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) (POM 34) Length = 275 Score = 213 bits (543), Expect(2) = 4e-58 Identities = 100/158 (63%), Positives = 129/158 (81%) Frame = +2 Query: 92 GPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILGEIQSQIKNK 271 GPGLY+ IGKKA+DLLY+DYQ+DHKF++TTY+ G IT++ +KK DL L ++ +Q+KNK Sbjct: 3 GPGLYTEIGKKARDLLYKDYQSDHKFSITTYSPTGVVITSSGSKKGDLFLADVNTQLKNK 62 Query: 272 NITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIG 451 N+T D+K ++ SN+ TTIT D+ AAPGLKTILSF VPDQ+SGK+E+QYLHDYAGI S+G Sbjct: 63 NVTTDIKVDTNSNLFTTITVDE-AAPGLKTILSFRVPDQRSGKLEVQYLHDYAGICTSVG 121 Query: 452 LTANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNA 565 LTANP+VN S GT+ +A+G DVS DT T +FTK NA Sbjct: 122 LTANPIVNFSGVVGTNIIALGTDVSFDTKTGDFTKCNA 159 Score = 31.2 bits (69), Expect(2) = 4e-58 Identities = 13/16 (81%), Positives = 15/16 (93%) Frame = +3 Query: 573 SYTNQDLIASLNLNNK 620 S+TN DL+ASLNLNNK Sbjct: 162 SFTNADLVASLNLNNK 177
>VDAC2_SOLTU (P42056) 36 kDa outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) (POM 36) Length = 275 Score = 216 bits (549), Expect(2) = 2e-56 Identities = 106/158 (67%), Positives = 127/158 (80%) Frame = +2 Query: 92 GPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILGEIQSQIKNK 271 GPGLYS IGKKA+DLLYRDY +DHKFT+TTY+ G AITA+ KK +L L ++ +Q+KNK Sbjct: 3 GPGLYSDIGKKARDLLYRDYVSDHKFTVTTYSTTGVAITASGLKKGELFLADVSTQLKNK 62 Query: 272 NITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIG 451 NIT DVK ++ SNV TTIT D+ APGLKTI SF VPDQKSGKVELQYLH+YAGIN SIG Sbjct: 63 NITTDVKVDTNSNVYTTITVDE-PAPGLKTIFSFVVPDQKSGKVELQYLHEYAGINTSIG 121 Query: 452 LTANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNA 565 LTA+P+VN S G + +A+G D+S DT+T NFTK NA Sbjct: 122 LTASPLVNFSGVAGNNTVALGTDLSFDTATGNFTKCNA 159 Score = 23.5 bits (49), Expect(2) = 2e-56 Identities = 10/16 (62%), Positives = 14/16 (87%) Frame = +3 Query: 573 SYTNQDLIASLNLNNK 620 S+++ DLIASL LN+K Sbjct: 162 SFSSSDLIASLALNDK 177
>VDAC_MAIZE (P42057) Outer plastidial membrane protein porin (Voltage-dependent| anion-selective channel protein) (VDAC) Length = 277 Score = 211 bits (538), Expect(2) = 7e-56 Identities = 101/163 (61%), Positives = 129/163 (79%) Frame = +2 Query: 98 GLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILGEIQSQIKNKNI 277 GLY+ IGKK +DLLY+DY T KF LTT + NG AITA T+K + I GE+ +QIKNK + Sbjct: 6 GLYTDIGKKTRDLLYKDYNTHQKFCLTTSSPNGVAITAAGTRKNESIFGELHTQIKNKKL 65 Query: 278 TVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIGLT 457 TVDVKANS S+++TTIT D+ PGLK+I++ VPDQ+SGK+E QYLH+YAG+NAS+GL Sbjct: 66 TVDVKANSESDLLTTITVDEFGTPGLKSIINLVVPDQRSGKLEFQYLHEYAGVNASVGLN 125 Query: 458 ANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNACV*LH*P 586 +NP+VNLS AFG+ AL+VG DVS DT+T +FTKYNA + L P Sbjct: 126 SNPMVNLSGAFGSKALSVGVDVSFDTATSDFTKYNAALSLTSP 168 Score = 25.8 bits (55), Expect(2) = 7e-56 Identities = 12/17 (70%), Positives = 14/17 (82%) Frame = +3 Query: 567 AFSYTNQDLIASLNLNN 617 A S T+ DLIASL+LNN Sbjct: 162 ALSLTSPDLIASLHLNN 178
>VDAC_PEA (P42054) Outer plastidial membrane protein porin (Voltage-dependent| anion-selective channel protein) (VDAC) Length = 275 Score = 203 bits (516), Expect = 4e-52 Identities = 96/160 (60%), Positives = 126/160 (78%) Frame = +2 Query: 92 GPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILGEIQSQIKNK 271 GPGLY+ IGKKA+DLLY+DY +D KFT++TY+ G AIT++ TKK +L LG++ +Q+KNK Sbjct: 3 GPGLYTDIGKKARDLLYKDYHSDKKFTISTYSPTGVAITSSGTKKGELFLGDVNTQLKNK 62 Query: 272 NITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIG 451 NIT D+K ++ SN+ TTIT ++ APG+K ILSF VP+Q SGKVELQYLH+YAGI++S+G Sbjct: 63 NITTDIKVDTNSNLFTTITVNE-PAPGVKAILSFKVPEQTSGKVELQYLHEYAGISSSVG 121 Query: 452 LTANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNACV 571 L ANP+VN S+ GT+ALA G D+S DT TK NA V Sbjct: 122 LKANPIVNFSSVIGTNALAFGADISFDTKLGELTKSNAAV 161
>VDAC1_ARATH (Q9SRH5) Outer mitochondrial membrane protein porin 1| (Voltage-dependent anion-selective channel protein 1) (VDAC 1) Length = 275 Score = 192 bits (488), Expect(2) = 6e-50 Identities = 94/158 (59%), Positives = 120/158 (75%) Frame = +2 Query: 92 GPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILGEIQSQIKNK 271 GPGLY+ IGKKA+DLLY+D+ +D KF++TT++ G AIT+T TKK DL+LG++ Q + K Sbjct: 3 GPGLYTEIGKKARDLLYKDHNSDQKFSITTFSPAGVAITSTGTKKGDLLLGDVAFQSRRK 62 Query: 272 NITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIG 451 NIT D+K + S + T T D+ AAPGL++I SF VPDQ SGKVELQYLH+YAGI+ S+G Sbjct: 63 NITTDLKVCTDSTFLITATVDE-AAPGLRSIFSFKVPDQNSGKVELQYLHEYAGISTSMG 121 Query: 452 LTANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNA 565 LT NP VN S G++ LAVG DVS DT + NFTK NA Sbjct: 122 LTQNPTVNFSGVIGSNVLAVGTDVSFDTKSGNFTKINA 159 Score = 25.0 bits (53), Expect(2) = 6e-50 Identities = 10/16 (62%), Positives = 14/16 (87%) Frame = +3 Query: 573 SYTNQDLIASLNLNNK 620 S+T +DLIASL +N+K Sbjct: 162 SFTKEDLIASLTVNDK 177
>VDAC2_ARATH (Q9SMX3) Outer mitochondrial membrane protein porin 2| (Voltage-dependent anion-selective channel protein 2) (VDAC 2) Length = 273 Score = 186 bits (472), Expect(2) = 1e-47 Identities = 87/158 (55%), Positives = 117/158 (74%) Frame = +2 Query: 92 GPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILGEIQSQIKNK 271 GPGLY+ IGKKA+DLLYRDYQ D KF++TTY++ G AIT T T K L LG++ +Q+KN Sbjct: 3 GPGLYTEIGKKARDLLYRDYQGDQKFSVTTYSSTGVAITTTGTNKGSLFLGDVATQVKNN 62 Query: 272 NITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIG 451 N T DVK ++ S+++TT+T D+ APGLK I+ +PD KSGK E+QY HDYAGI+ S+G Sbjct: 63 NFTADVKVSTDSSLLTTLTFDE-PAPGLKVIVQAKLPDHKSGKAEVQYFHDYAGISTSVG 121 Query: 452 LTANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNA 565 TA P+VN S GT+ L++G DV+ +T + NF +NA Sbjct: 122 FTATPIVNFSGVVGTNGLSLGTDVAYNTESGNFKHFNA 159 Score = 23.5 bits (49), Expect(2) = 1e-47 Identities = 10/17 (58%), Positives = 13/17 (76%) Frame = +3 Query: 570 FSYTNQDLIASLNLNNK 620 F++T DL ASL LN+K Sbjct: 161 FNFTKDDLTASLILNDK 177
>VDAC_DROME (Q94920) Voltage-dependent anion-selective channel (Porin) (DmVDAC)| Length = 281 Score = 57.4 bits (137), Expect = 3e-08 Identities = 42/165 (25%), Positives = 77/165 (46%), Gaps = 9/165 (5%) Frame = +2 Query: 95 PGLYSGIGKKAKDLLYRDYQTD-HKFTLTTYTANGAAITAT--STKKADLILGEIQS--Q 259 P YS +GK+A+D+ + Y K L T T++G S +++ + G +++ + Sbjct: 2 PPSYSDLGKQARDIFSKGYNFGLWKLDLKTKTSSGIEFNTAGHSNQESGKVFGSLETKYK 61 Query: 260 IKNKNITVDVKANSASNVITTITADDLAAPGLKTIL--SFAVPD-QKSGKVELQYLHDYA 430 +K+ +T+ K N+ + + T + D GLK L +FA K+GK ++ Y H+ Sbjct: 62 VKDYGLTLTEKWNTDNTLFTEVAVQDQLLEGLKLSLEGNFAPQSGNKNGKFKVAYGHENV 121 Query: 431 GINASIGL-TANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYN 562 ++ + + P++N SA G G + DT T N Sbjct: 122 KADSDVNIDLKGPLINASAVLGYQGWLAGYQTAFDTQQSKLTTNN 166
>VDAC_CAEEL (Q21752) Probable voltage-dependent anion-selective channel| Length = 283 Score = 57.0 bits (136), Expect = 4e-08 Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 10/159 (6%) Frame = +2 Query: 95 PGLYSGIGKKAKDLLYRDYQTDH-KFTLTTYTANGAAITATSTKKADLILG------EIQ 253 P ++ +GK AKDL + Y K TT + + S ++ G +++ Sbjct: 3 PPTFADLGKSAKDLFNKGYNFGFLKIDSTTRAGDNKEVEFKSAASHNIGSGKLGGNLDVK 62 Query: 254 SQIKNKNITVDVKANSASNVITTITADDLAAPGLKTIL-SFAVPD--QKSGKVELQYLHD 424 +I IT+ K N+ + + T I ++ GLK L S P ++SGKV+L + Sbjct: 63 YKIPQYGITLTEKWNTENQLGTVIEVNEQFGRGLKVTLDSLYAPHAGKRSGKVKLDWALP 122 Query: 425 YAGINASIGLTANPVVNLSAAFGTSALAVGGDVSLDTST 541 A + A +G+T+ PV+N + F +G + D+S+ Sbjct: 123 TARVTADVGVTSAPVINAAGVFSRDGWLIGAAATFDSSS 161
>VDAC2_XENLA (P81004) Voltage-dependent anion-selective channel protein 2 (Outer| mitochondrial membrane protein porin) Length = 282 Score = 57.0 bits (136), Expect = 4e-08 Identities = 44/168 (26%), Positives = 73/168 (43%), Gaps = 9/168 (5%) Frame = +2 Query: 95 PGLYSGIGKKAKDLLYRDYQTD-HKFTLTTYTANGAAITATSTKKAD--LILGEIQSQIK 265 P Y+ +GK A+D+ + Y K + T +A G T + T D + G ++++ K Sbjct: 3 PPSYADLGKSARDIFNKGYGFGLVKLDVKTKSATGVEFTTSGTSNTDSGKVNGSLETKYK 62 Query: 266 --NKNITVDVKANSASNVITTITADDLAAPGLKTILSFAV---PDQKSGKVELQYLHDYA 430 +T K N+ + + T I +D A GLK +KSGKV+ Y +Y Sbjct: 63 WGEYGLTFTEKWNTDNTLGTEIAIEDQIAKGLKLTFDTTFSPNTGKKSGKVKAAYKQEYV 122 Query: 431 GINASIGLT-ANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNACV 571 + + A P ++ SA G G ++ D++ TK N V Sbjct: 123 NLGCDVDFDFAGPAIHGSAVVGYEGWLAGYQMTFDSAKSKLTKNNFAV 170
>VDAC2_MELGA (P82013) Voltage-dependent anion-selective channel protein 2| (VDAC-2) (Outer mitochondrial membrane protein porin 2) Length = 282 Score = 52.8 bits (125), Expect = 8e-07 Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 9/168 (5%) Frame = +2 Query: 95 PGLYSGIGKKAKDLLYRDYQTD-HKFTLTTYTANGAAITATSTKKADL--ILGEIQSQIK 265 P Y+ +GK A+D+ + Y K + T +A+G T + + D + G ++++ K Sbjct: 3 PPSYADLGKSARDIFNKGYGFGLVKLDVKTKSASGVEFTTSGSSNTDTGKVNGSLETKYK 62 Query: 266 --NKNITVDVKANSASNVITTITADDLAAPGLKTILSFAV---PDQKSGKVELQYLHDYA 430 +T K N+ + + T I +D A GLK +KSGK++ Y + Sbjct: 63 WAEYGLTFTEKWNTDNTLGTEIAIEDQIAKGLKLTFDTTFSPNTGKKSGKIKSAYKRECL 122 Query: 431 GINASIGLT-ANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNACV 571 + + A P ++ SA FG G ++ D++ T+ N V Sbjct: 123 NLGCDVDFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNFSV 170
>VDAC1_MOUSE (Q60932) Voltage-dependent anion-selective channel protein 1| (VDAC-1) (mVDAC1) (mVDAC5) (Outer mitochondrial membrane protein porin 1) (Plasmalemmal porin) Length = 296 Score = 47.0 bits (110), Expect = 5e-05 Identities = 41/171 (23%), Positives = 77/171 (45%), Gaps = 9/171 (5%) Frame = +2 Query: 86 MGGPGLYSGIGKKAKDLLYRDYQTD-HKFTLTTYTANGAAITATSTKKADL--ILGEIQS 256 M P Y+ +GK A+D+ + Y K L T + NG T++ + + + G +++ Sbjct: 14 MAVPPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVNGSLET 73 Query: 257 QIK--NKNITVDVKANSASNVITTITADDLAAPGLK-TILSFAVPD--QKSGKVELQYLH 421 + + +T K N+ + + T IT +D A GLK T S P+ +K+ K++ Y Sbjct: 74 KYRWTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTFDSSFSPNTGKKNAKIKTGYKR 133 Query: 422 DYAGINASIGL-TANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNACV 571 ++ + + A P + + G G ++ +TS T+ N V Sbjct: 134 EHINLGCDVDFDIAGPSIRGALVLGYEGWLAGYQMNFETSKSRVTQSNFAV 184
>VDAC1_RAT (Q9Z2L0) Voltage-dependent anion-selective channel protein 1| (VDAC-1) (rVDAC1) (Outer mitochondrial membrane protein porin 1) Length = 282 Score = 46.2 bits (108), Expect = 8e-05 Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 9/168 (5%) Frame = +2 Query: 95 PGLYSGIGKKAKDLLYRDYQTD-HKFTLTTYTANGAAITATSTKKADL--ILGEIQSQIK 265 P Y+ +GK A+D+ + Y K L T + NG T++ + + + G ++++ + Sbjct: 3 PPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVNGSLETKYR 62 Query: 266 --NKNITVDVKANSASNVITTITADDLAAPGLK-TILSFAVPD--QKSGKVELQYLHDYA 430 +T K N+ + + T IT +D A GLK T S P+ +K+ K++ Y ++ Sbjct: 63 WTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTFDSSFSPNTGKKNAKIKTGYKREHI 122 Query: 431 GINASIGL-TANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNACV 571 + + A P + + G G ++ +TS T+ N V Sbjct: 123 NLGCDVDFDIAGPSIRGALVLGYEGWLAGYQMNFETSKSRVTQSNFAV 170
>VDAC1_PIG (Q9MZ16) Voltage-dependent anion-selective channel protein 1| (VDAC-1) Length = 282 Score = 46.2 bits (108), Expect = 8e-05 Identities = 39/168 (23%), Positives = 76/168 (45%), Gaps = 9/168 (5%) Frame = +2 Query: 95 PGLYSGIGKKAKDLLYRDYQTD-HKFTLTTYTANGAAITATSTKKADL--ILGEIQSQIK 265 P Y+ +GK A+D+ + Y K L T + NG T++ + + + G ++++ + Sbjct: 3 PPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVTGSLETKYR 62 Query: 266 --NKNITVDVKANSASNVITTITADDLAAPGLK-TILSFAVPD--QKSGKVELQYLHDYA 430 +T K N+ + + T IT +D A GLK T S P+ +K+ K++ Y ++ Sbjct: 63 WTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTFDSSFSPNTGKKNAKIKTGYKREHV 122 Query: 431 GINASIGL-TANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNACV 571 + + A P + + G G ++ +T+ T+ N V Sbjct: 123 NLGCDVDFDIAGPSIRGALVLGYEGWLAGYQMNFETAKSRVTQSNFAV 170
>VDAC1_RABIT (Q9TT15) Voltage-dependent anion-selective channel protein 1| (VDAC-1) (Outer mitochondrial membrane protein porin 1) Length = 282 Score = 45.8 bits (107), Expect = 1e-04 Identities = 39/168 (23%), Positives = 76/168 (45%), Gaps = 9/168 (5%) Frame = +2 Query: 95 PGLYSGIGKKAKDLLYRDYQTD-HKFTLTTYTANGAAITATSTKKADL--ILGEIQSQIK 265 P Y+ +GK A+D+ + Y K L T + NG T++ + + + G ++++ + Sbjct: 3 PPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVTGSLETKYR 62 Query: 266 --NKNITVDVKANSASNVITTITADDLAAPGLK-TILSFAVPD--QKSGKVELQYLHDYA 430 +T K N+ + + T IT +D A GLK T S P+ +K+ K++ Y ++ Sbjct: 63 WTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTFDSSFSPNTGKKNAKIKTGYKREHI 122 Query: 431 GINASIGL-TANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNACV 571 + + A P + + G G ++ +T+ T+ N V Sbjct: 123 NLGCDVDFDIAGPSIRGALVLGYEGWLAGYQMNFETAKSRVTQSNFAV 170
>VDAC1_BOVIN (P45879) Voltage-dependent anion-selective channel protein 1| (VDAC-1) (Plasmalemmal porin) (Brain-derived voltage-dependent anion channel 1) (BR1-VDAC) Length = 282 Score = 45.8 bits (107), Expect = 1e-04 Identities = 39/168 (23%), Positives = 76/168 (45%), Gaps = 9/168 (5%) Frame = +2 Query: 95 PGLYSGIGKKAKDLLYRDYQTD-HKFTLTTYTANGAAITATSTKKADL--ILGEIQSQIK 265 P Y+ +GK A+D+ + Y K L T + NG T++ + + + G ++++ + Sbjct: 3 PPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVTGSLETKYR 62 Query: 266 --NKNITVDVKANSASNVITTITADDLAAPGLK-TILSFAVPD--QKSGKVELQYLHDYA 430 +T K N+ + + T IT +D A GLK T S P+ +K+ K++ Y ++ Sbjct: 63 WTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTFDSSFSPNTGKKNAKIKTGYKREHI 122 Query: 431 GINASIGL-TANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNACV 571 + + A P + + G G ++ +T+ T+ N V Sbjct: 123 NLGCDVDFDIAGPSIRGALVLGYEGWLAGYQMNFETAKSRVTQSNFAV 170
>VDAC1_HUMAN (P21796) Voltage-dependent anion-selective channel protein 1| (VDAC-1) (hVDAC1) (Outer mitochondrial membrane protein porin 1) (Plasmalemmal porin) (Porin 31HL) (Porin 31HM) Length = 282 Score = 45.1 bits (105), Expect = 2e-04 Identities = 39/168 (23%), Positives = 76/168 (45%), Gaps = 9/168 (5%) Frame = +2 Query: 95 PGLYSGIGKKAKDLLYRDYQTD-HKFTLTTYTANGAAITATSTKKADL--ILGEIQSQIK 265 P Y+ +GK A+D+ + Y K L T + NG T++ + + + G ++++ + Sbjct: 3 PPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVTGSLETKYR 62 Query: 266 --NKNITVDVKANSASNVITTITADDLAAPGLK-TILSFAVPD--QKSGKVELQYLHDYA 430 +T K N+ + + T IT +D A GLK T S P+ +K+ K++ Y ++ Sbjct: 63 WTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTFDSSFSPNTGKKNAKIKTGYKREHI 122 Query: 431 GINASIGL-TANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNACV 571 + + A P + + G G ++ +T+ T+ N V Sbjct: 123 NLGCDMDFDIAGPSIRGALVLGYEGWLAGYQMNFETAKSRVTQSNFAV 170
>VDAC_SCHPO (Q9P544) Probable outer mitochondrial membrane protein porin| Length = 282 Score = 35.4 bits (80), Expect = 0.14 Identities = 36/167 (21%), Positives = 66/167 (39%), Gaps = 8/167 (4%) Frame = +2 Query: 95 PGLYSGIGKKAKDLLYRDYQTDHK-FTLTTYTANGAAITATSTKKA-DLILGEIQSQIKN 268 P Y+ I K DLL RD+ ++ T NG + + A +I G++++ + Sbjct: 3 PPAYAAINKLCNDLLQRDFPVGATLLSVRTTAPNGVVFNVSGNQDAKGVISGKLETSFND 62 Query: 269 K--NITVDVKANSASNVITTITADDLAAPGL----KTILSFAVPDQKSGKVELQYLHDYA 430 K +T+ +A+ + + + + APGL T S A K+ + L++ H Sbjct: 63 KANGLTISQGWTTANVLESKVGLSEQFAPGLHLNVNTTFSPATA-AKTAILNLEHQHPLI 121 Query: 431 GINASIGLTANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNACV 571 +AS+ + G G + D N + Y A + Sbjct: 122 HTHASVNALERKFLG-DFTVGHEGFLAGAEFGYDVQKGNVSNYAATI 167
>VDAC_DICDI (Q01501) Outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) Length = 275 Score = 34.7 bits (78), Expect = 0.23 Identities = 38/148 (25%), Positives = 56/148 (37%), Gaps = 20/148 (13%) Frame = +2 Query: 95 PGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILGEIQ------- 253 PGLY+ + K D + +D+ K TT+ +I A + K ++ IQ Sbjct: 3 PGLYADLTKPTADFIKKDFAETFKLD-TTFKGKYGSIVAVTDIKDSGVVASIQPKADFTK 61 Query: 254 --SQIKNKNITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSG-KVELQYL-- 418 ++ N N TVD N TI + PGLK + A D K E QY Sbjct: 62 YLGKVSNGNFTVD--TNGVKKGEFTI---ENIIPGLKAV---ANGDSKQNFSTEFQYKKD 113 Query: 419 --------HDYAGINASIGLTANPVVNL 478 H+ N S+ NP ++ Sbjct: 114 KIAFTLFGHNNKSFNTSLAFLINPTFSV 141
>POLG_TEV (P04517) Genome polyprotein [Contains: P1 proteinase (N-terminal| protein); Helper component proteinase (EC 3.4.22.45) (HC-pro); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (EC 3.6.1.-) (CI); 6 kDa protein 2 (6K2); Viral geno Length = 3054 Score = 32.7 bits (73), Expect = 0.88 Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 3/136 (2%) Frame = +2 Query: 104 YSGIGKKAKDLLYRDYQTDHKFTLTTYTANGAAITA--TSTKKADLILGEIQSQIKNK-N 274 Y+ + K L+ + Y+ K T + G I TS KK ++ I I+N Sbjct: 1420 YNDVDSLGKLLVQKGYKVS-KIDGRTMKSGGTEIITEGTSVKKHFIVATNI---IENGVT 1475 Query: 275 ITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIGL 454 I +DV + + V+ + D+ A KT++S+ QK G+V G+ IG Sbjct: 1476 IDIDVVVDFGTKVVPVLDVDNRAVQYNKTVVSYGERIQKLGRVG----RHKEGVALRIGQ 1531 Query: 455 TANPVVNLSAAFGTSA 502 T +V + T A Sbjct: 1532 TNKTLVEIPEMVATEA 1547
>COAT_TRSV (Q88894) Coat protein precursor (Capsid protein)| Length = 515 Score = 31.6 bits (70), Expect = 2.0 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 18/78 (23%) Frame = +2 Query: 380 PDQKSGKVELQ---YLHDYAGINASIGLTANPVVNLSAAFG---------------TSAL 505 PD +G V Y+HD+A +A++ L +NP+ L AA G A Sbjct: 367 PDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAATGWHYGEVDLCISWSRSKQAQ 426 Query: 506 AVGGDVSLDTSTKNFTKY 559 A G VS+ T+ +++ Y Sbjct: 427 AQEGSVSITTNYRDWGAY 444
>RHLB_XANAC (Q8PFZ3) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 571 Score = 31.6 bits (70), Expect = 2.0 Identities = 16/42 (38%), Positives = 20/42 (47%) Frame = +1 Query: 43 RSSSGAGASQLTGGNGRARPLLRDRQEGQGSALQGLPDRPQV 168 RS SG G G +G+ RP + R EGQ A + P V Sbjct: 443 RSGSGGGRRDGAGADGKPRPRRKPRVEGQAPAAAASTEHPVV 484
>POL2_TRSV (Q6UR06) RNA2 polyprotein (P2) [Contains: P2A protein (2A); Movement| protein (2B-MP); Coat protein (2C-CP)] Length = 1101 Score = 31.6 bits (70), Expect = 2.0 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 18/78 (23%) Frame = +2 Query: 380 PDQKSGKVELQ---YLHDYAGINASIGLTANPVVNLSAAFG---------------TSAL 505 PD +G V Y+HD+A +A++ L +NP+ L AA G A Sbjct: 953 PDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAATGWHYGEVDLCISWPRSKQAQ 1012 Query: 506 AVGGDVSLDTSTKNFTKY 559 A G VS+ T+ +++ Y Sbjct: 1013 AQEGSVSITTNYRDWGAY 1030
>LEU2_MYCSM (Q938C9) 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 422 Score = 31.6 bits (70), Expect = 2.0 Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 1/71 (1%) Frame = +2 Query: 344 APGLKTILSFAVPDQKSGKVELQYLHDYAGINASIGLTANPVVNLSAAFGTSALAVG-GD 520 APG++ I++ A + L YL D A A I + A FG VG G+ Sbjct: 315 APGVRLIVTPASQQVYRDAMRLGYLQDIADAGAVITNST-----CGACFGYHMGVVGPGE 369 Query: 521 VSLDTSTKNFT 553 V L +ST+NFT Sbjct: 370 VCLTSSTRNFT 380
>VDAC1_YEAST (P04840) Outer mitochondrial membrane protein porin 1| (Voltage-dependent anion-selective channel protein 1) (VDAC 1) Length = 282 Score = 30.4 bits (67), Expect = 4.4 Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 6/97 (6%) Frame = +2 Query: 95 PGLYSGIGKKAKDLLYRDY--QTDHKFTLTTYTANGA--AITATSTKKADLILGEIQSQI 262 P +YS I + DLL +D+ T F + T TANG ++ A K + +++++ Sbjct: 2 PPVYSDISRNINDLLNKDFYHATPAAFDVQTTTANGIKFSLKAKQPVKDGPLSTNVEAKL 61 Query: 263 KNKNITVDVKA--NSASNVITTITADDLAAPGLKTIL 367 +K + + ++ +N+ T + +L PGLK L Sbjct: 62 NDKQTGLGLTQGWSNTNNLQTKLEFANL-TPGLKNEL 97
>SRP_DROME (P52172) Box A-binding factor (ABF) (GATA-binding factor-B)| (Transcription factor GATA-B) (dGATA-B) (Protein serpent) Length = 1264 Score = 30.4 bits (67), Expect = 4.4 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%) Frame = -2 Query: 536 MYQATHHHQQLEH*FQTQQRG*L--QDWQSSQCLH*YQHNHVSTGA 405 ++Q HHHQQ H Q QQ+ Q Q Q H + HN+ ++ A Sbjct: 406 LHQQQHHHQQQLHHHQQQQQQLYHQQQQQQQQQQHHHHHNNSTSSA 451
>GTFB_STRMU (P08987) Glucosyltransferase-I precursor (EC 2.4.1.5) (GTF-I)| (Dextransucrase) (Sucrose 6-glucosyltransferase) Length = 1476 Score = 30.0 bits (66), Expect = 5.7 Identities = 21/58 (36%), Positives = 28/58 (48%) Frame = +2 Query: 173 LTTYTANGAAITATSTKKADLILGEIQSQIKNKNITVDVKANSASNVITTITADDLAA 346 +T T +G + A S E +SQI N + T V AN SNV T +T+ AA Sbjct: 26 MTLTTLSGGLVKADSN--------ESKSQISNDSNTSVVTANEESNVTTEVTSKQEAA 75
>RBF1_CANAL (Q00312) Transcription factor RBF1 (RPG-box-binding factor)| (Repressor-activator protein 1) Length = 527 Score = 30.0 bits (66), Expect = 5.7 Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 3/60 (5%) Frame = -2 Query: 530 QATHHHQQLEH*FQTQQRG*LQDWQSSQCL---H*YQHNHVSTGAPPFQISDQEQQSSRW 360 QA HQQL+H +Q QQ+ Q Q SQ L H QH HV + E SR+ Sbjct: 122 QAQREHQQLQHAYQQQQQ-LHQLGQLSQQLAQPHLSQHEHVRDALTTDEFDTNEDLRSRY 180
>LEU2_CAMJR (Q5HS78) 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 468 Score = 30.0 bits (66), Expect = 5.7 Identities = 18/70 (25%), Positives = 32/70 (45%) Frame = +2 Query: 116 GKKAKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILGEIQSQIKNKNITVDVKA 295 GK +LY D H+ T + +G + +ADL L I + K++ ++ + Sbjct: 18 GKNELPILYIDRHLIHEVT-SPQAFSGLKMAKRRMARADLTLATIDHDVSTKSVDLNACS 76 Query: 296 NSASNVITTI 325 + A ITT+ Sbjct: 77 DMAKEQITTL 86
>FLID_BACHD (Q9K6W0) Flagellar hook-associated protein 2 (HAP2) (Filament cap| protein) (Flagellar cap protein) Length = 532 Score = 30.0 bits (66), Expect = 5.7 Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 11/157 (7%) Frame = +2 Query: 125 AKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILGEIQSQIKNKNITVDVKANSA 304 A L DY FT+TTY ++GAA+ + T L + I + + V + NS Sbjct: 131 ADGLNIEDYH-GQTFTITTYNSSGAAVEKSFTIDTSKSLDSLFKDINSAGLGVRMSYNST 189 Query: 305 SNVI---TTITADDLAAPGLK--TILSFAVPDQKSGKVELQYLHDYAGINASIG-----L 454 + + T T AA G I+ + ++L ++ +G NA + + Sbjct: 190 YDKVIIERTETGAFNAADGSNDYQIVFGGDTGFLNDVLKLNQANEVSGTNAEVEFIDPIM 249 Query: 455 TANPVVNLSAAFGTSALAVGG-DVSLDTSTKNFTKYN 562 ++ P+V + T+ + VGG SL +T+ F N Sbjct: 250 SSEPIVVSDSR--TNRVTVGGITFSLTGTTEGFETLN 284
>DNM1L_BRARE (Q7SXN5) Dynamin-1-like protein (EC 3.6.5.5)| Length = 691 Score = 30.0 bits (66), Expect = 5.7 Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 4/55 (7%) Frame = +1 Query: 13 RRLPPSSTNPRSSSGAGASQLTGGNGRARPLLRDRQEGQG---SALQ-GLPDRPQ 165 R LP S + + GA A Q GG G R +L+ EGQG + LQ +P PQ Sbjct: 520 RELPTSVPRDKMAGGAQAEQ-EGGTGTWRGMLKKGDEGQGEEKTKLQSSIPASPQ 573
>SNT1_YEAST (P25357) Probable DNA-binding protein SNT1| Length = 1226 Score = 29.6 bits (65), Expect = 7.5 Identities = 18/54 (33%), Positives = 25/54 (46%) Frame = +1 Query: 13 RRLPPSSTNPRSSSGAGASQLTGGNGRARPLLRDRQEGQGSALQGLPDRPQVHP 174 + + P+ T PRSSS + GNG++ P R Q + QG P P P Sbjct: 1130 QEIKPNITTPRSSSISALLNPVNGNGQSNPDGRPLLPFQHAISQGTPTFPLPAP 1183
>IF2_THEFY (Q47RV1) Translation initiation factor IF-2| Length = 955 Score = 29.6 bits (65), Expect = 7.5 Identities = 18/50 (36%), Positives = 22/50 (44%) Frame = +1 Query: 13 RRLPPSSTNPRSSSGAGASQLTGGNGRARPLLRDRQEGQGSALQGLPDRP 162 R PP P +SS +G + GG G A P R G G+ G RP Sbjct: 258 RPTPPGGARPSTSSRSGGGRGRGGGGGAGP--RGGGAGGGAPRTGFGGRP 305
>LEU2_CAMJE (Q9PLW1) 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 470 Score = 29.3 bits (64), Expect = 9.8 Identities = 18/70 (25%), Positives = 32/70 (45%) Frame = +2 Query: 116 GKKAKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILGEIQSQIKNKNITVDVKA 295 GK +LY D H+ T + +G + +ADL L I + K++ ++ + Sbjct: 20 GKNELPILYIDRHLIHEVT-SPQAFSGLKMAKRRMARADLTLATIDHDVSTKSMDLNACS 78 Query: 296 NSASNVITTI 325 + A ITT+ Sbjct: 79 DMAKEQITTL 88
>TBP2_HAEIN (P44971) Probable transferrin-binding protein 2 precursor| Length = 625 Score = 29.3 bits (64), Expect = 9.8 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Frame = +2 Query: 119 KKAKDLLYRDYQTDHKFTLTTYTANGA-AITATSTKKADLILGEIQSQIKNKNITVDVKA 295 K K L R + F++ NG A T T+T K DL++ SQ KN I + K Sbjct: 510 KTLKGSLKRADSQNPVFSIEANFKNGGNAFTGTATAK-DLVIDGKNSQTKNTPINITTKV 568 Query: 296 NSA 304 N A Sbjct: 569 NGA 571 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 86,104,707 Number of Sequences: 219361 Number of extensions: 1742176 Number of successful extensions: 6084 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 5659 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6067 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5653129581 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
