ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd26j21 |
|---|---|
| Clone Library Name | barley_pub |
>WRBA_SALTI (Q8Z7N9) Flavoprotein wrbA (Trp repressor-binding protein)| Length = 197 Score = 81.6 bits (200), Expect = 1e-15 Identities = 41/71 (57%), Positives = 53/71 (74%), Gaps = 1/71 (1%) Frame = +3 Query: 18 TQLTHHGMVFVPVGYTFGAKMFDMDKVQGGSPYGAGTFAG-DGSRWPSEMELEHAFHQGK 194 T L HHGMV VP+GY+ ++FD+ +V+GG+PYGA T AG DGSR PS+ EL A +QG+ Sbjct: 128 TTLAHHGMVIVPIGYS-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGE 186 Query: 195 YFAGIAKKLKG 227 Y AG+A KL G Sbjct: 187 YVAGLAVKLNG 197
>WRBA_SHIFL (P0A8G8) Flavoprotein wrbA (Trp repressor-binding protein)| Length = 197 Score = 81.3 bits (199), Expect = 1e-15 Identities = 41/71 (57%), Positives = 52/71 (73%), Gaps = 1/71 (1%) Frame = +3 Query: 18 TQLTHHGMVFVPVGYTFGAKMFDMDKVQGGSPYGAGTFAG-DGSRWPSEMELEHAFHQGK 194 T L HHGMV VP+GY ++FD+ +V+GG+PYGA T AG DGSR PS+ EL A +QG+ Sbjct: 128 TTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGE 186 Query: 195 YFAGIAKKLKG 227 Y AG+A KL G Sbjct: 187 YVAGLAVKLNG 197
>WRBA_SALTY (Q8ZQ40) Flavoprotein wrbA (Trp repressor-binding protein)| Length = 197 Score = 81.3 bits (199), Expect = 1e-15 Identities = 41/71 (57%), Positives = 52/71 (73%), Gaps = 1/71 (1%) Frame = +3 Query: 18 TQLTHHGMVFVPVGYTFGAKMFDMDKVQGGSPYGAGTFAG-DGSRWPSEMELEHAFHQGK 194 T L HHGMV VP+GY ++FD+ +V+GG+PYGA T AG DGSR PS+ EL A +QG+ Sbjct: 128 TTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGE 186 Query: 195 YFAGIAKKLKG 227 Y AG+A KL G Sbjct: 187 YVAGLAVKLNG 197
>WRBA_SALPA (Q5PG91) Flavoprotein wrbA (Trp repressor-binding protein)| Length = 197 Score = 81.3 bits (199), Expect = 1e-15 Identities = 41/71 (57%), Positives = 52/71 (73%), Gaps = 1/71 (1%) Frame = +3 Query: 18 TQLTHHGMVFVPVGYTFGAKMFDMDKVQGGSPYGAGTFAG-DGSRWPSEMELEHAFHQGK 194 T L HHGMV VP+GY ++FD+ +V+GG+PYGA T AG DGSR PS+ EL A +QG+ Sbjct: 128 TTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGE 186 Query: 195 YFAGIAKKLKG 227 Y AG+A KL G Sbjct: 187 YVAGLAVKLNG 197
>WRBA_ECOLI (P0A8G6) Flavoprotein wrbA (Trp repressor-binding protein)| Length = 197 Score = 81.3 bits (199), Expect = 1e-15 Identities = 41/71 (57%), Positives = 52/71 (73%), Gaps = 1/71 (1%) Frame = +3 Query: 18 TQLTHHGMVFVPVGYTFGAKMFDMDKVQGGSPYGAGTFAG-DGSRWPSEMELEHAFHQGK 194 T L HHGMV VP+GY ++FD+ +V+GG+PYGA T AG DGSR PS+ EL A +QG+ Sbjct: 128 TTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGE 186 Query: 195 YFAGIAKKLKG 227 Y AG+A KL G Sbjct: 187 YVAGLAVKLNG 197
>WRBA_ECOL6 (P0A8G7) Flavoprotein wrbA (Trp repressor-binding protein)| Length = 197 Score = 81.3 bits (199), Expect = 1e-15 Identities = 41/71 (57%), Positives = 52/71 (73%), Gaps = 1/71 (1%) Frame = +3 Query: 18 TQLTHHGMVFVPVGYTFGAKMFDMDKVQGGSPYGAGTFAG-DGSRWPSEMELEHAFHQGK 194 T L HHGMV VP+GY ++FD+ +V+GG+PYGA T AG DGSR PS+ EL A +QG+ Sbjct: 128 TTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGE 186 Query: 195 YFAGIAKKLKG 227 Y AG+A KL G Sbjct: 187 YVAGLAVKLNG 197
>WRBA_ECO57 (Q8X4B4) Flavoprotein wrbA (Trp repressor-binding protein)| Length = 197 Score = 81.3 bits (199), Expect = 1e-15 Identities = 41/71 (57%), Positives = 52/71 (73%), Gaps = 1/71 (1%) Frame = +3 Query: 18 TQLTHHGMVFVPVGYTFGAKMFDMDKVQGGSPYGAGTFAG-DGSRWPSEMELEHAFHQGK 194 T L HHGMV VP+GY ++FD+ +V+GG+PYGA T AG DGSR PS+ EL A +QG+ Sbjct: 128 TTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGE 186 Query: 195 YFAGIAKKLKG 227 Y AG+A KL G Sbjct: 187 YVAGLAVKLNG 197
>WRBA_PHOLL (Q7N5I5) Flavoprotein wrbA (Trp repressor-binding protein)| Length = 199 Score = 73.6 bits (179), Expect = 3e-13 Identities = 38/70 (54%), Positives = 51/70 (72%), Gaps = 1/70 (1%) Frame = +3 Query: 18 TQLTHHGMVFVPVGYTFGAKMFDMDKVQGGSPYGAGTFA-GDGSRWPSEMELEHAFHQGK 194 T L HHG + VP+GY ++ D+ ++QGG+PYGA T A GDGSR P+E EL+ A +QG+ Sbjct: 130 TTLAHHGFIIVPIGYGI-PEIGDISQMQGGTPYGASTIADGDGSRIPNENELKIARYQGE 188 Query: 195 YFAGIAKKLK 224 + A IAKKLK Sbjct: 189 HVAKIAKKLK 198
>WRBA_YERPS (Q66BP3) Flavoprotein wrbA (Trp repressor-binding protein)| Length = 199 Score = 72.0 bits (175), Expect = 9e-13 Identities = 40/72 (55%), Positives = 49/72 (68%), Gaps = 2/72 (2%) Frame = +3 Query: 18 TQLTHHGMVFVPVGYTFGAK-MFDMDKVQGGSPYGAGTFAG-DGSRWPSEMELEHAFHQG 191 T L HHG + VP+GY GAK +FD+ + +GG+PYGA T AG DGSR PS EL A QG Sbjct: 130 TTLAHHGFIIVPIGY--GAKELFDVSQTRGGTPYGATTIAGGDGSRQPSAEELAIARFQG 187 Query: 192 KYFAGIAKKLKG 227 ++ A I KLKG Sbjct: 188 EHVAKITAKLKG 199
>WRBA_YERPE (Q8ZF61) Flavoprotein wrbA (Trp repressor-binding protein)| Length = 199 Score = 72.0 bits (175), Expect = 9e-13 Identities = 40/72 (55%), Positives = 49/72 (68%), Gaps = 2/72 (2%) Frame = +3 Query: 18 TQLTHHGMVFVPVGYTFGAK-MFDMDKVQGGSPYGAGTFAG-DGSRWPSEMELEHAFHQG 191 T L HHG + VP+GY GAK +FD+ + +GG+PYGA T AG DGSR PS EL A QG Sbjct: 130 TTLAHHGFIIVPIGY--GAKELFDVSQTRGGTPYGATTIAGGDGSRQPSAEELAIARFQG 187 Query: 192 KYFAGIAKKLKG 227 ++ A I KLKG Sbjct: 188 EHVAKITAKLKG 199
>ALTA7_ALTAL (P42058) Minor allergen Alt a 7 (Alt a VII)| Length = 204 Score = 70.9 bits (172), Expect = 2e-12 Identities = 37/73 (50%), Positives = 52/73 (71%), Gaps = 3/73 (4%) Frame = +3 Query: 6 LTAVTQLTHHGMVFVPVGYTFGAKMF-DMDKVQGGSPYGAGTF-AGDGSRWPSEMELEHA 179 +T+++ L HG ++VP+GY M ++D+V GGSP+GAGTF AGDGSR PSE+EL A Sbjct: 129 ITSMSTLVDHGFIYVPLGYKTAFSMLANLDEVHGGSPWGAGTFSAGDGSRQPSELELNIA 188 Query: 180 FHQGK-YFAGIAK 215 QGK ++ +AK Sbjct: 189 QAQGKAFYEAVAK 201
>PST2_YEAST (Q12335) Protoplast secreted protein 2 precursor| Length = 198 Score = 68.2 bits (165), Expect = 1e-11 Identities = 35/67 (52%), Positives = 49/67 (73%), Gaps = 2/67 (2%) Frame = +3 Query: 6 LTAVTQLTHHGMVFVPVGY-TFGAKMFDMDKVQGGSPYGAGTFAG-DGSRWPSEMELEHA 179 + +++ L HHG++FVP+GY A++ +MD+V GGSP+GAGT AG DGSR PS +EL+ Sbjct: 125 MNSLSTLAHHGIIFVPLGYKNVFAELTNMDEVHGGSPWGAGTIAGSDGSRSPSALELQVH 184 Query: 180 FHQGKYF 200 QGK F Sbjct: 185 EIQGKTF 191
>WRBA_RHOPA (Q6NBB9) Flavoprotein wrbA| Length = 199 Score = 66.6 bits (161), Expect = 4e-11 Identities = 39/72 (54%), Positives = 46/72 (63%), Gaps = 1/72 (1%) Frame = +3 Query: 15 VTQLTHHGMVFVPVGYTFGAKMFDMDKVQGGSPYGAGTFAG-DGSRWPSEMELEHAFHQG 191 +T L H GMV V + Y FG +M +D+V GG+PYGA T G DGSR PSE EL A +QG Sbjct: 129 ITNLLHFGMVVVGLNYGFGDQM-RLDQVTGGAPYGATTITGGDGSRQPSETELAGARYQG 187 Query: 192 KYFAGIAKKLKG 227 K A A KL G Sbjct: 188 KTIAETAIKLHG 199
>YCP4_YEAST (P25349) Hypothetical 26.4 kDa protein in CDC10-CIT2 intergenic| region Length = 247 Score = 66.2 bits (160), Expect = 5e-11 Identities = 36/71 (50%), Positives = 49/71 (69%), Gaps = 2/71 (2%) Frame = +3 Query: 15 VTQLTHHGMVFVPVGYTFG-AKMFDMDKVQGGSPYGAGTFAG-DGSRWPSEMELEHAFHQ 188 ++ L HHG++F+P+GY A++ +++V GGSP+GAGT AG DGSR S +EL A Q Sbjct: 130 LSYLAHHGIIFLPLGYKNSFAELASIEEVHGGSPWGAGTLAGPDGSRTASPLELRIAEIQ 189 Query: 189 GKYFAGIAKKL 221 GK F AKKL Sbjct: 190 GKTFYETAKKL 200
>WRBA1_RHIME (Q92PU3) Flavoprotein wrbA 1| Length = 199 Score = 65.1 bits (157), Expect = 1e-10 Identities = 37/73 (50%), Positives = 47/73 (64%), Gaps = 1/73 (1%) Frame = +3 Query: 6 LTAVTQLTHHGMVFVPVGYTFGAKMFDMDKVQGGSPYGAGTFAG-DGSRWPSEMELEHAF 182 L + + HHGMV V + Y F +M +++V+GGSPYGA T G DGSR PS +ELE A Sbjct: 126 LGLIPTMMHHGMVVVGLPYAFQGQM-GVEEVKGGSPYGASTITGGDGSRQPSAVELEAAR 184 Query: 183 HQGKYFAGIAKKL 221 QG + A IA KL Sbjct: 185 FQGAHVARIAAKL 197
>WRBA_GEOSL (Q74F05) Flavoprotein wrbA| Length = 203 Score = 63.9 bits (154), Expect = 2e-10 Identities = 38/75 (50%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Frame = +3 Query: 6 LTAVTQLTHHGMVFVPVGYTFGAKMFDMDKVQGGSPYGAGTFAG-DGSRWPSEMELEHAF 182 LT T L H GMV V + Y F + +D++ GGSPYGA T AG G R PSE +L A Sbjct: 130 LTFHTFLLHQGMVIVGLPYAFAGQT-RIDEITGGSPYGASTIAGGQGERLPSENDLAGAR 188 Query: 183 HQGKYFAGIAKKLKG 227 QG+Y A IA KL G Sbjct: 189 FQGRYVAQIAAKLNG 203
>WRBA_BRUSU (Q8G0P0) Flavoprotein wrbA| Length = 199 Score = 63.9 bits (154), Expect = 2e-10 Identities = 35/70 (50%), Positives = 45/70 (64%), Gaps = 1/70 (1%) Frame = +3 Query: 21 QLTHHGMVFVPVGYTFGAKMFDMDKVQGGSPYGAGTFA-GDGSRWPSEMELEHAFHQGKY 197 Q+ HHGM+ VP+ Y + +M + D V+GG+PYG T A GDGSR PS EL+ A QG+ Sbjct: 131 QMQHHGMIIVPLSYAYREQMGN-DVVRGGAPYGMTTTADGDGSRQPSAQELDGARFQGRR 189 Query: 198 FAGIAKKLKG 227 A I KL G Sbjct: 190 VAEITAKLHG 199
>WRBA_BRUME (Q8YH68) Flavoprotein wrbA| Length = 199 Score = 63.9 bits (154), Expect = 2e-10 Identities = 35/70 (50%), Positives = 45/70 (64%), Gaps = 1/70 (1%) Frame = +3 Query: 21 QLTHHGMVFVPVGYTFGAKMFDMDKVQGGSPYGAGTFA-GDGSRWPSEMELEHAFHQGKY 197 Q+ HHGM+ VP+ Y + +M + D V+GG+PYG T A GDGSR PS EL+ A QG+ Sbjct: 131 QMQHHGMIIVPLSYAYREQMGN-DVVRGGAPYGMTTTADGDGSRQPSAQELDGARFQGRR 189 Query: 198 FAGIAKKLKG 227 A I KL G Sbjct: 190 VAEITAKLHG 199
>WRBA_BRAJA (Q89D74) Flavoprotein wrbA| Length = 199 Score = 63.9 bits (154), Expect = 2e-10 Identities = 36/72 (50%), Positives = 45/72 (62%), Gaps = 1/72 (1%) Frame = +3 Query: 15 VTQLTHHGMVFVPVGYTFGAKMFDMDKVQGGSPYGAGTFAG-DGSRWPSEMELEHAFHQG 191 +T L H GMV V + Y F +M +D+V GG+PYGA T G DGSR PS EL A +QG Sbjct: 129 ITNLLHFGMVVVGMNYGFAGQM-KLDEVTGGAPYGATTITGGDGSRQPSANELAGARYQG 187 Query: 192 KYFAGIAKKLKG 227 + A A+KL G Sbjct: 188 RQIAETARKLHG 199
>P25_SCHPO (P30821) P25 protein (Brefeldin A resistance protein)| Length = 202 Score = 63.5 bits (153), Expect = 3e-10 Identities = 36/68 (52%), Positives = 49/68 (72%), Gaps = 3/68 (4%) Frame = +3 Query: 6 LTAVTQLTHHGMVFVPVGY--TFGAKMFDMDKVQGGSPYGAGTFAG-DGSRWPSEMELEH 176 LTA+T HHGM+FVP+GY TF + M +++ + GGS +GAG++AG DGSR S+ ELE Sbjct: 129 LTAMTSFVHHGMIFVPLGYKNTF-SLMANVESIHGGSSWGAGSYAGADGSRNVSDDELEI 187 Query: 177 AFHQGKYF 200 A QG+ F Sbjct: 188 ARIQGETF 195
>WRBA_AGRT5 (P58795) Flavoprotein wrbA| Length = 199 Score = 62.8 bits (151), Expect = 5e-10 Identities = 33/65 (50%), Positives = 44/65 (67%), Gaps = 1/65 (1%) Frame = +3 Query: 30 HHGMVFVPVGYTFGAKMFDMDKVQGGSPYGAGTFA-GDGSRWPSEMELEHAFHQGKYFAG 206 HHGM V + Y F +M +D+++GGSPYGA T GDGSR PS +EL+ A +QG + A Sbjct: 134 HHGMAVVGLPYAFQGQM-GVDEIKGGSPYGASTITDGDGSRQPSAIELDAARYQGAHVAK 192 Query: 207 IAKKL 221 +A KL Sbjct: 193 LAAKL 197
>WRBA_METMA (Q8PUV4) Flavoprotein wrbA| Length = 209 Score = 62.4 bits (150), Expect = 7e-10 Identities = 36/69 (52%), Positives = 45/69 (65%), Gaps = 1/69 (1%) Frame = +3 Query: 24 LTHHGMVFVPVGYTFGAKMFDMDKVQGGSPYGAGTFAG-DGSRWPSEMELEHAFHQGKYF 200 L H GMV V + Y + M+++ GGSPYGA T AG DGSR PSE ELE A +QG++ Sbjct: 141 LLHLGMVIVGLPYAEKRQTI-MNEITGGSPYGASTIAGGDGSRQPSENELEMARYQGRHV 199 Query: 201 AGIAKKLKG 227 IAKK+ G Sbjct: 200 TQIAKKIAG 208
>WRBA2_RHIME (Q930L2) Flavoprotein wrbA 2| Length = 202 Score = 62.4 bits (150), Expect = 7e-10 Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 1/70 (1%) Frame = +3 Query: 15 VTQLTHHGMVFVPVGYTFGAKMFDMDKVQGGSPYGAGTFAG-DGSRWPSEMELEHAFHQG 191 +T L H GMV V + Y+ +M +D++ GG+PYGA T AG DGSR PS+++L AFHQG Sbjct: 129 ITNLMHFGMVIVGLPYSHQGQM-SVDEIVGGAPYGATTVAGGDGSRQPSQIDLAGAFHQG 187 Query: 192 KYFAGIAKKL 221 + A A L Sbjct: 188 EIVARTAAAL 197
>WRBA_METAC (P58796) Flavoprotein wrbA| Length = 209 Score = 61.2 bits (147), Expect = 2e-09 Identities = 36/75 (48%), Positives = 46/75 (61%), Gaps = 1/75 (1%) Frame = +3 Query: 6 LTAVTQLTHHGMVFVPVGYTFGAKMFDMDKVQGGSPYGAGTFAG-DGSRWPSEMELEHAF 182 LT L H GM+ V + Y+ + MD++ GGSPYG T AG DGSR PSE EL A Sbjct: 135 LTFHVTLLHLGMILVGLPYS-EKRQTRMDEITGGSPYGVSTIAGGDGSRQPSENELAMAR 193 Query: 183 HQGKYFAGIAKKLKG 227 +QG++ IAKK+ G Sbjct: 194 YQGRHVTLIAKKIAG 208
>CLAH7_CLAHE (P42059) Minor allergen Cla h 7 (Cla h 5) (Cla h V)| Length = 204 Score = 59.3 bits (142), Expect = 6e-09 Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 2/72 (2%) Frame = +3 Query: 6 LTAVTQLTHHGMVFVPVGY-TFGAKMFDMDKVQGGSPYGAGTFA-GDGSRWPSEMELEHA 179 L A++ L+HHG+++VP+GY T + D +V+G + +GAGTF+ GDGSR PS+ ELE Sbjct: 129 LAAMSTLSHHGIIYVPLGYKTTFHLLGDNSEVRGAAVWGAGTFSGGDGSRQPSQKELELT 188 Query: 180 FHQGKYFAGIAK 215 ++ +AK Sbjct: 189 AQGKAFYEAVAK 200
>WRBA_CAUCR (Q9AA17) Flavoprotein wrbA| Length = 199 Score = 58.9 bits (141), Expect = 8e-09 Identities = 34/72 (47%), Positives = 43/72 (59%), Gaps = 1/72 (1%) Frame = +3 Query: 15 VTQLTHHGMVFVPVGYTFGAKMFDMDKVQGGSPYGAGTFAG-DGSRWPSEMELEHAFHQG 191 +T + H G V + Y +M +D++ GGSPYGA T AG DGSR PSE EL A +QG Sbjct: 129 ITNMLHFGTTIVGLDYGHAGQM-TLDEITGGSPYGATTIAGGDGSRQPSENELTGARYQG 187 Query: 192 KYFAGIAKKLKG 227 + A A KL G Sbjct: 188 RKIAETAIKLHG 199
>WRBA_ZYMMO (Q9XBR5) Flavoprotein wrbA| Length = 200 Score = 57.8 bits (138), Expect = 2e-08 Identities = 33/70 (47%), Positives = 46/70 (65%), Gaps = 1/70 (1%) Frame = +3 Query: 15 VTQLTHHGMVFVPVGYTFGAKMFDMDKVQGGSPYGAGTFAG-DGSRWPSEMELEHAFHQG 191 ++ L HHG+V + Y+F + +D+V GG+PYGA T A DGSR PS+ EL+ A G Sbjct: 129 MSSLLHHGLVISGLPYSFQGQG-RLDEVTGGAPYGATTIAASDGSRQPSKNELDGAKFLG 187 Query: 192 KYFAGIAKKL 221 K+ A +AKKL Sbjct: 188 KHVAELAKKL 197
>WRBA3_RHIME (Q92Y27) Flavoprotein wrbA 3| Length = 212 Score = 51.2 bits (121), Expect = 2e-06 Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 3/70 (4%) Frame = +3 Query: 24 LTHHGMVFVPVGYTFGAKMFDMDKVQGGSPYGAGTFAGDGS---RWPSEMELEHAFHQGK 194 + H GMV V + Y+F +M MD++ GGSPYGA T A D + R PS EL+ A QG+ Sbjct: 132 MLHLGMVIVGLPYSFKGQM-RMDEITGGSPYGASTLAEDENHRDRSPSANELDGARFQGR 190 Query: 195 YFAGIAKKLK 224 + A +A ++ Sbjct: 191 HVAEVAAAMQ 200
>YBQ2_YEAST (P38234) Hypothetical 22.9 kDa protein in REG2-YRO2 intergenic| region Length = 210 Score = 50.1 bits (118), Expect = 3e-06 Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 2/74 (2%) Frame = +3 Query: 6 LTAVTQLTHHGMVFVPVGYTFGAK-MFDMDKVQGGSPYGAGTFAG-DGSRWPSEMELEHA 179 + A++ L HHG+++VP+GY K + D++ V G +GAG +G DG R PS EL Sbjct: 137 MNAMSTLVHHGVIYVPLGYKNAYKELTDVEDVNGSCAWGAGCVSGIDGGRPPSLSELRVH 196 Query: 180 FHQGKYFAGIAKKL 221 QGK F K L Sbjct: 197 QLQGKAFYDRIKDL 210
>CAC1I_HUMAN (Q9P0X4) Voltage-dependent T-type calcium channel alpha-1I subunit| (Voltage-gated calcium channel alpha subunit Cav3.3) (Ca(v)3.3) Length = 2223 Score = 32.3 bits (72), Expect = 0.75 Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 1/29 (3%) Frame = -2 Query: 122 GPVRAAALHLVHVEHL-GAERVPHRHEHH 39 GP RAA LH H H+ + HRH HH Sbjct: 1025 GPPRAAPLHTPHAHHIHHGPHLAHRHRHH 1053
>DOS_MOUSE (Q66L44) Protein Dos (Downstream of Stk11 protein) (Fragment)| Length = 552 Score = 31.6 bits (70), Expect = 1.3 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = +2 Query: 2 AADSSDPADPPRHGVRAGGVHVRRQDVRHGQGA 100 AA + P PP HG+ G H ++QD + Q A Sbjct: 238 AAGGASPETPPEHGISLGPEHAQQQDPQQEQDA 270
>PARM1_MOUSE (Q923D3) Protein PARM-1 precursor| Length = 296 Score = 31.6 bits (70), Expect = 1.3 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 2/47 (4%) Frame = -3 Query: 169 SSISDGHLDPSPA--NVPAPYGLPPCTLSMSNILAPNVYPTGTNTMP 35 S+ SDGHL P+P ++ +P P T S S +L + PT T P Sbjct: 106 STSSDGHLAPTPEEHSLGSPEATVPATGSQSPMLLSSQAPTSATTSP 152
>FTSK_TREPA (O83964) DNA translocase ftsK| Length = 799 Score = 29.6 bits (65), Expect = 4.9 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Frame = -3 Query: 235 AEEPFSFLAMPAKYLPWWKACSSSISDGHLDPSPANVPAPY-GLPPCTLSMSNILAPNVY 59 ++ PF L P S+ SD H SP ++P+ PC +++S I AP+V Sbjct: 249 SQAPFPLLPAPGLIQ------SNLPSDVHAPASPGSLPSVIPAQAPCVMALSPISAPSVA 302 Query: 58 PTGT 47 P T Sbjct: 303 PAET 306
>NLK_MOUSE (O54949) Serine/threonine kinase NLK (EC 2.7.11.24) (Nemo-like| kinase) Length = 515 Score = 28.9 bits (63), Expect = 8.3 Identities = 12/37 (32%), Positives = 16/37 (43%) Frame = -2 Query: 149 PRPVPGERAGPVRAAALHLVHVEHLGAERVPHRHEHH 39 P P PG+ GP AA + + H+H HH Sbjct: 83 PSPAPGQAPGPAAAAPAQVQAAAAATVKAHHHQHSHH 119
>NLK_HUMAN (Q9UBE8) Serine/threonine kinase NLK (EC 2.7.11.24) (Nemo-like| kinase) (LAK1 protein) Length = 515 Score = 28.9 bits (63), Expect = 8.3 Identities = 12/37 (32%), Positives = 16/37 (43%) Frame = -2 Query: 149 PRPVPGERAGPVRAAALHLVHVEHLGAERVPHRHEHH 39 P P PG+ GP AA + + H+H HH Sbjct: 83 PSPAPGQAPGPAAAAPAQVQAAAAATVKAHHHQHSHH 119
>HCN4_MOUSE (O70507) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 4 (Brain cyclic nucleotide gated channel 3) (BCNG-3) Length = 1186 Score = 23.5 bits (49), Expect(2) = 9.6 Identities = 15/46 (32%), Positives = 21/46 (45%) Frame = -3 Query: 139 SPANVPAPYGLPPCTLSMSNILAPNVYPTGTNTMPWWVSWVTAVSG 2 SP++ P G PP LS+ P+ P T P S++ SG Sbjct: 953 SPSSSPGQLGQPPGELSLGLAAGPSSTPE-TPPRPERPSFMAGASG 997 Score = 23.5 bits (49), Expect(2) = 9.6 Identities = 12/41 (29%), Positives = 16/41 (39%) Frame = -2 Query: 242 HSGRGAFQLLGDAGEVLALVEGVLQLHLRRPPRPVPGERAG 120 H G D+ + L G +PP P+PG R G Sbjct: 897 HKALGGSLSSSDSPLLTPLQPGARSPQAAQPPPPLPGARGG 937 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,435,853 Number of Sequences: 219361 Number of extensions: 1457968 Number of successful extensions: 5206 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 4819 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5147 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3696665728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
