ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd26j05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF508969.1| Triticum aestivum translation initiation factor mRNA, complete cds Length = 742 Score = 424 bits (214), Expect = e-115 Identities = 307/333 (92%), Gaps = 10/333 (3%) Strand = Plus / Plus Query: 179 tccagggtgatcagaggaagaacgtctcaaacttccttgtccaggcgggcattgtgaaga 238 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 395 tccagggtgatcagaggaagaacgtctcaaacttccttgtccaggccggcattgtgaaga 454 Query: 239 aggaacacatcaagattcatggtttctgagcaactgccagctccttatcagagtctgcat 298 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 455 aggaacacatcaagattcatggtttctgagcaactgccagctccatatcagagtctacat 514 Query: 299 gcaaagcagctaatatatattggtggtgcagtatatttagttgtgtgctagcgctagcag 358 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 515 gcaaagcagc---tatatattggtggtgcagtatatttagttgtgtgctagcgctagcag 571 Query: 359 gcgccac--gcttgcgccttctgagtatacacaaagtctagcatag-ccacctctctgcg 415 ||| || |||||||| |||||||||||| ||| |||||||||| |||||||||| Sbjct: 572 gcgttaccagcttgcgcgctctgagtatacagaaaatctagcatagtccacctctct--- 628 Query: 416 tgcgtatatgcttactacccgttgtgttgaagctttgtaaggagcaccatcgttagatgg 475 ||||| ||||||| || ||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 629 tgcgtgtatgcttgtta-ccgttgtgttgaaactttgtaaggagcaccatctttagatgg 687 Query: 476 cttgttaccctctcccatcaaggttgaataata 508 |||||||||||||||| |||||||||| ||||| Sbjct: 688 cttgttaccctctcccgtcaaggttgagtaata 720 Score = 232 bits (117), Expect = 9e-58 Identities = 123/125 (98%) Strand = Plus / Plus Query: 62 ctgcctttgacccctttgccgaggcgaatgctggggacgctggtgcagctgccggatcaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 ctgcctttgacccctttgccgaggcgaatgctggggacgctggtgcagctgccggatcaa 223 Query: 122 aggactacgtgcatgtacgcatccagcagcgtaatggtcgcaagagcctgaccactgtcc 181 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 224 aagactacgttcatgtacgcatccagcagcgtaatggtcgcaagagcctgaccactgtcc 283 Query: 182 agggt 186 ||||| Sbjct: 284 agggt 288 Score = 113 bits (57), Expect = 6e-22 Identities = 64/65 (98%), Gaps = 1/65 (1%) Strand = Plus / Plus Query: 1 gggtctgaagaaggagttcagctacagcaagnatcctcaaagacctcaagaaagagtttt 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 285 gggtctgaagaaggagttcagctacagcaag-atcctcaaagacctcaagaaagagtttt 343 Query: 61 gctgc 65 ||||| Sbjct: 344 gctgc 348
>emb|AJ249397.1|PPR249397 Phleum pratense mRNA for putative protein translation factor SUI (SUI1 gene), partial Length = 560 Score = 202 bits (102), Expect = 8e-49 Identities = 123/130 (94%) Strand = Plus / Plus Query: 179 tccagggtgatcagaggaagaacgtctcaaacttccttgtccaggcgggcattgtgaaga 238 ||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||| | Sbjct: 200 tccagggtgatcagaggaagaacgtctcaaatttcctcgtccaggctggcattgtgaaaa 259 Query: 239 aggaacacatcaagattcatggtttctgagcaactgccagctccttatcagagtctgcat 298 |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 260 aggaacacatcaagattcatggtttctgagcaactgccagctccatatcaaagtctgcat 319 Query: 299 gcaaagcagc 308 ||||| |||| Sbjct: 320 gcaaatcagc 329 Score = 127 bits (64), Expect = 4e-26 Identities = 85/92 (92%) Strand = Plus / Plus Query: 94 ggggacgctggtgcagctgccggatcaaaggactacgtgcatgtacgcatccagcagcgt 153 ||||||||||||||||| || |||||||| |||||||| ||||||||||||||||||||| Sbjct: 1 ggggacgctggtgcagcggcaggatcaaaagactacgtccatgtacgcatccagcagcgt 60 Query: 154 aatggtcgcaagagcctgaccactgtccaggg 185 ||||| |||||||| ||||| ||||||||||| Sbjct: 61 aatggccgcaagagtctgactactgtccaggg 92 Score = 79.8 bits (40), Expect = 8e-12 Identities = 56/60 (93%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 6 tgaagaaggagttcagctacagcaagnatcctcaaagacctcaagaaagagttttgctgc 65 |||||||||| ||||||||||| ||| ||||||||||| ||||||||||||||||||||| Sbjct: 95 tgaagaaggaattcagctacagtaag-atcctcaaagatctcaagaaagagttttgctgc 153 Score = 71.9 bits (36), Expect = 2e-09 Identities = 151/184 (82%), Gaps = 9/184 (4%) Strand = Plus / Plus Query: 328 agtatatttagttgtgtgctagcgctagcaggcgccacgcttgcgccttctgagtataca 387 |||||||| ||||||||||||| |||||||| |||||||| | || ||||| |||| Sbjct: 346 agtatattcggttgtgtgctagcaatagcaggcattacgcttgcacgtt-tgagtttaca 404 Query: 388 caaa--gtctagcatagccacctctctgcgtgcgtatatgcttactacccgttgtgttga 445 |||| | |||||||||| ||||||||||||| ||||||| | |||||||||||| Sbjct: 405 caaaaagcctagcatagcgacctctctgcgtg----tatgcttgtttaccgttgtgttga 460 Query: 446 agctttgtaaggagcaccatcgttagatggcttgttaccctctcccatcaaggttgaata 505 | | | ||||| |||||||||||||||| ||||||| || ||| | ||||||||||||| Sbjct: 461 aacct-gtaagaagcaccatcgttagat-gcttgtttccttctactgtcaaggttgaata 518 Query: 506 ataa 509 |||| Sbjct: 519 ataa 522
>ref|XM_478516.1| Oryza sativa (japonica cultivar-group), mRNA Length = 348 Score = 159 bits (80), Expect = 1e-35 Identities = 113/124 (91%) Strand = Plus / Plus Query: 62 ctgcctttgacccctttgccgaggcgaatgctggggacgctggtgcagctgccggatcaa 121 ||||||| || |||||||| ||||| |||||||| ||| ||||||| ||||| ||||||| Sbjct: 29 ctgccttcgatccctttgctgaggccaatgctggagactctggtgcggctgcaggatcaa 88 Query: 122 aggactacgtgcatgtacgcatccagcagcgtaatggtcgcaagagcctgaccactgtcc 181 |||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 89 aggactacgttcatgtacgcatccagcagcgtaatggccgtaagagcctgaccactgtcc 148 Query: 182 aggg 185 |||| Sbjct: 149 aggg 152 Score = 125 bits (63), Expect = 2e-25 Identities = 81/87 (93%) Strand = Plus / Plus Query: 181 cagggtgatcagaggaagaacgtctcaaacttccttgtccaggcgggcattgtgaagaag 240 ||||||||||||||||| ||||| ||||| || ||||| ||||| ||||||||||||||| Sbjct: 262 cagggtgatcagaggaaaaacgtatcaaattttcttgttcaggccggcattgtgaagaag 321 Query: 241 gaacacatcaagattcatggtttctga 267 ||||||||||||||||||||||||||| Sbjct: 322 gaacacatcaagattcatggtttctga 348 Score = 79.8 bits (40), Expect = 8e-12 Identities = 56/60 (93%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 6 tgaagaaggagttcagctacagcaagnatcctcaaagacctcaagaaagagttttgctgc 65 |||||||||| |||||||||| |||| ||||||||||| ||||||||||||||||||||| Sbjct: 155 tgaagaaggaattcagctacaacaag-atcctcaaagatctcaagaaagagttttgctgc 213
>gb|DQ083224.1| Oryza sativa (indica cultivar-group) clone 5B11F72 mRNA sequence Length = 358 Score = 159 bits (80), Expect = 1e-35 Identities = 113/124 (91%) Strand = Plus / Plus Query: 62 ctgcctttgacccctttgccgaggcgaatgctggggacgctggtgcagctgccggatcaa 121 ||||||| || |||||||| ||||| |||||||| ||| ||||||| ||||| ||||||| Sbjct: 172 ctgccttcgatccctttgctgaggccaatgctggagactctggtgcggctgcaggatcaa 231 Query: 122 aggactacgtgcatgtacgcatccagcagcgtaatggtcgcaagagcctgaccactgtcc 181 |||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 232 aggactacgttcatgtacgcatccagcagcgtaatggccgtaagagcctgaccactgtcc 291 Query: 182 aggg 185 |||| Sbjct: 292 aggg 295 Score = 71.9 bits (36), Expect = 2e-09 Identities = 55/60 (91%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 6 tgaagaaggagttcagctacagcaagnatcctcaaagacctcaagaaagagttttgctgc 65 |||||||||| |||||||||| |||| ||||| ||||| ||||||||||||||||||||| Sbjct: 298 tgaagaaggaattcagctacaacaag-atccttaaagatctcaagaaagagttttgctgc 356
>gb|AF380357.1|AF380357 Porteresia coarctata translational initiation factor eIF1 mRNA, complete cds Length = 773 Score = 159 bits (80), Expect = 1e-35 Identities = 113/124 (91%) Strand = Plus / Plus Query: 62 ctgcctttgacccctttgccgaggcgaatgctggggacgctggtgcagctgccggatcaa 121 ||||||| || |||||||| ||||| |||||||| ||| ||||||| ||||| ||||||| Sbjct: 184 ctgccttcgatccctttgctgaggccaatgctggagactctggtgcggctgcaggatcaa 243 Query: 122 aggactacgtgcatgtacgcatccagcagcgtaatggtcgcaagagcctgaccactgtcc 181 |||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 244 aggactacgttcatgtacgcatccagcagcgtaatggccgtaagagcctgaccactgtcc 303 Query: 182 aggg 185 |||| Sbjct: 304 aggg 307 Score = 131 bits (66), Expect = 3e-27 Identities = 84/90 (93%) Strand = Plus / Plus Query: 181 cagggtgatcagaggaagaacgtctcaaacttccttgtccaggcgggcattgtgaagaag 240 ||||||||||||||||| ||||| ||||| || ||||| ||||| ||||||||||||||| Sbjct: 417 cagggtgatcagaggaaaaacgtatcaaattttcttgttcaggccggcattgtgaagaag 476 Query: 241 gaacacatcaagattcatggtttctgagca 270 |||||||||||||||||||||||||||||| Sbjct: 477 gaacacatcaagattcatggtttctgagca 506 Score = 79.8 bits (40), Expect = 8e-12 Identities = 56/60 (93%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 6 tgaagaaggagttcagctacagcaagnatcctcaaagacctcaagaaagagttttgctgc 65 |||||||||| |||||||||| |||| ||||||||||| ||||||||||||||||||||| Sbjct: 310 tgaagaaggaattcagctacaacaag-atcctcaaagatctcaagaaagagttttgctgc 368
>dbj|AK120697.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170I05, full insert sequence Length = 752 Score = 159 bits (80), Expect = 1e-35 Identities = 113/124 (91%) Strand = Plus / Plus Query: 62 ctgcctttgacccctttgccgaggcgaatgctggggacgctggtgcagctgccggatcaa 121 ||||||| || |||||||| ||||| |||||||| ||| ||||||| ||||| ||||||| Sbjct: 207 ctgccttcgatccctttgctgaggccaatgctggagactctggtgcggctgcaggatcaa 266 Query: 122 aggactacgtgcatgtacgcatccagcagcgtaatggtcgcaagagcctgaccactgtcc 181 |||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 267 aggactacgttcatgtacgcatccagcagcgtaatggccgtaagagcctgaccactgtcc 326 Query: 182 aggg 185 |||| Sbjct: 327 aggg 330 Score = 145 bits (73), Expect = 2e-31 Identities = 91/97 (93%) Strand = Plus / Plus Query: 181 cagggtgatcagaggaagaacgtctcaaacttccttgtccaggcgggcattgtgaagaag 240 ||||||||||||||||| ||||| ||||| || ||||| ||||| ||||||||||||||| Sbjct: 440 cagggtgatcagaggaaaaacgtatcaaattttcttgttcaggccggcattgtgaagaag 499 Query: 241 gaacacatcaagattcatggtttctgagcaactgcca 277 ||||||||||||||||||||||||||||||||||||| Sbjct: 500 gaacacatcaagattcatggtttctgagcaactgcca 536 Score = 79.8 bits (40), Expect = 8e-12 Identities = 56/60 (93%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 6 tgaagaaggagttcagctacagcaagnatcctcaaagacctcaagaaagagttttgctgc 65 |||||||||| |||||||||| |||| ||||||||||| ||||||||||||||||||||| Sbjct: 333 tgaagaaggaattcagctacaacaag-atcctcaaagatctcaagaaagagttttgctgc 391
>dbj|AK105037.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-C07, full insert sequence Length = 1275 Score = 159 bits (80), Expect = 1e-35 Identities = 113/124 (91%) Strand = Plus / Plus Query: 62 ctgcctttgacccctttgccgaggcgaatgctggggacgctggtgcagctgccggatcaa 121 ||||||| || |||||||| ||||| |||||||| ||| ||||||| ||||| ||||||| Sbjct: 730 ctgccttcgatccctttgctgaggccaatgctggagactctggtgcggctgcaggatcaa 789 Query: 122 aggactacgtgcatgtacgcatccagcagcgtaatggtcgcaagagcctgaccactgtcc 181 |||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 790 aggactacgttcatgtacgcatccagcagcgtaatggccgtaagagcctgaccactgtcc 849 Query: 182 aggg 185 |||| Sbjct: 850 aggg 853 Score = 145 bits (73), Expect = 2e-31 Identities = 91/97 (93%) Strand = Plus / Plus Query: 181 cagggtgatcagaggaagaacgtctcaaacttccttgtccaggcgggcattgtgaagaag 240 ||||||||||||||||| ||||| ||||| || ||||| ||||| ||||||||||||||| Sbjct: 963 cagggtgatcagaggaaaaacgtatcaaattttcttgttcaggccggcattgtgaagaag 1022 Query: 241 gaacacatcaagattcatggtttctgagcaactgcca 277 ||||||||||||||||||||||||||||||||||||| Sbjct: 1023 gaacacatcaagattcatggtttctgagcaactgcca 1059 Score = 79.8 bits (40), Expect = 8e-12 Identities = 56/60 (93%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 6 tgaagaaggagttcagctacagcaagnatcctcaaagacctcaagaaagagttttgctgc 65 |||||||||| |||||||||| |||| ||||||||||| ||||||||||||||||||||| Sbjct: 856 tgaagaaggaattcagctacaacaag-atcctcaaagatctcaagaaagagttttgctgc 914
>gb|AF094774.1|AF094774 Oryza sativa translation initiation factor (GOS2) mRNA, complete cds Length = 744 Score = 159 bits (80), Expect = 1e-35 Identities = 113/124 (91%) Strand = Plus / Plus Query: 62 ctgcctttgacccctttgccgaggcgaatgctggggacgctggtgcagctgccggatcaa 121 ||||||| || |||||||| ||||| |||||||| ||| ||||||| ||||| ||||||| Sbjct: 187 ctgccttcgatccctttgctgaggccaatgctggagactctggtgcggctgcaggatcaa 246 Query: 122 aggactacgtgcatgtacgcatccagcagcgtaatggtcgcaagagcctgaccactgtcc 181 |||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 247 aggactacgttcatgtacgcatccagcagcgtaatggccgtaagagcctgaccactgtcc 306 Query: 182 aggg 185 |||| Sbjct: 307 aggg 310 Score = 145 bits (73), Expect = 2e-31 Identities = 91/97 (93%) Strand = Plus / Plus Query: 181 cagggtgatcagaggaagaacgtctcaaacttccttgtccaggcgggcattgtgaagaag 240 ||||||||||||||||| ||||| ||||| || ||||| ||||| ||||||||||||||| Sbjct: 420 cagggtgatcagaggaaaaacgtatcaaattttcttgttcaggccggcattgtgaagaag 479 Query: 241 gaacacatcaagattcatggtttctgagcaactgcca 277 ||||||||||||||||||||||||||||||||||||| Sbjct: 480 gaacacatcaagattcatggtttctgagcaactgcca 516 Score = 79.8 bits (40), Expect = 8e-12 Identities = 56/60 (93%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 6 tgaagaaggagttcagctacagcaagnatcctcaaagacctcaagaaagagttttgctgc 65 |||||||||| |||||||||| |||| ||||||||||| ||||||||||||||||||||| Sbjct: 313 tgaagaaggaattcagctacaacaag-atcctcaaagatctcaagaaagagttttgctgc 371
>emb|X51910.1|OSGOS2G O.sativa (rice) constitutive GOS2 gene Length = 3192 Score = 153 bits (77), Expect = 7e-34 Identities = 104/113 (92%) Strand = Plus / Plus Query: 73 ccctttgccgaggcgaatgctggggacgctggtgcagctgccggatcaaaggactacgtg 132 |||||||| ||||| |||||||| ||| ||||||| ||||| ||||||||||||||||| Sbjct: 2324 ccctttgctgaggccaatgctggagactctggtgcggctgcaggatcaaaggactacgtt 2383 Query: 133 catgtacgcatccagcagcgtaatggtcgcaagagcctgaccactgtccaggg 185 |||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 2384 catgtacgcatccagcagcgtaatggccgtaagagcctgaccactgtccaggg 2436 Score = 105 bits (53), Expect = 1e-19 Identities = 56/57 (98%) Strand = Plus / Plus Query: 220 caggcgggcattgtgaagaaggaacacatcaagattcatggtttctgagcaactgcc 276 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2782 caggccggcattgtgaagaaggaacacatcaagattcatggtttctgagcaactgcc 2838 Score = 71.9 bits (36), Expect = 2e-09 Identities = 55/60 (91%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 6 tgaagaaggagttcagctacagcaagnatcctcaaagacctcaagaaagagttttgctgc 65 |||||||||| |||||||||| |||| ||||| ||||| ||||||||||||||||||||| Sbjct: 2439 tgaagaaggaattcagctacaacaag-atccttaaagatctcaagaaagagttttgctgc 2497 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 181 cagggtgatcagaggaagaacgtctcaaacttccttgtccagg 223 ||||||||||||||||||||||| ||||| || ||||| |||| Sbjct: 2637 cagggtgatcagaggaagaacgtatcaaattttcttgttcagg 2679
>gb|DQ083223.1| Oryza sativa (indica cultivar-group) clone 5B12A69 mRNA sequence Length = 209 Score = 153 bits (77), Expect = 7e-34 Identities = 92/97 (94%) Strand = Plus / Plus Query: 181 cagggtgatcagaggaagaacgtctcaaacttccttgtccaggcgggcattgtgaagaag 240 ||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||||||||| Sbjct: 43 cagggtgatcagaggaagaacgtatcaaattttcttgttcaggccggcattgtgaagaag 102 Query: 241 gaacacatcaagattcatggtttctgagcaactgcca 277 ||||||||||||||||||||||||||||||||||||| Sbjct: 103 gaacacatcaagattcatggtttctgagcaactgcca 139
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 153 bits (77), Expect = 7e-34 Identities = 104/113 (92%) Strand = Plus / Minus Query: 73 ccctttgccgaggcgaatgctggggacgctggtgcagctgccggatcaaaggactacgtg 132 |||||||| ||||| |||||||| ||| ||||||| ||||| ||||||||||||||||| Sbjct: 20680388 ccctttgctgaggccaatgctggagactctggtgcggctgcaggatcaaaggactacgtt 20680329 Query: 133 catgtacgcatccagcagcgtaatggtcgcaagagcctgaccactgtccaggg 185 |||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 20680328 catgtacgcatccagcagcgtaatggccgtaagagcctgaccactgtccaggg 20680276 Score = 107 bits (54), Expect = 4e-20 Identities = 57/58 (98%) Strand = Plus / Minus Query: 220 caggcgggcattgtgaagaaggaacacatcaagattcatggtttctgagcaactgcca 277 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20679930 caggccggcattgtgaagaaggaacacatcaagattcatggtttctgagcaactgcca 20679873 Score = 79.8 bits (40), Expect = 8e-12 Identities = 56/60 (93%), Gaps = 1/60 (1%) Strand = Plus / Minus Query: 6 tgaagaaggagttcagctacagcaagnatcctcaaagacctcaagaaagagttttgctgc 65 |||||||||| |||||||||| |||| ||||||||||| ||||||||||||||||||||| Sbjct: 20680273 tgaagaaggaattcagctacaacaag-atcctcaaagatctcaagaaagagttttgctgc 20680215 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Minus Query: 181 cagggtgatcagaggaagaacgtctcaaacttccttgtccagg 223 ||||||||||||||||| ||||| ||||| || ||||| |||| Sbjct: 20680075 cagggtgatcagaggaaaaacgtatcaaattttcttgttcagg 20680033
>dbj|AP004674.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0681F05 Length = 144741 Score = 153 bits (77), Expect = 7e-34 Identities = 104/113 (92%) Strand = Plus / Minus Query: 73 ccctttgccgaggcgaatgctggggacgctggtgcagctgccggatcaaaggactacgtg 132 |||||||| ||||| |||||||| ||| ||||||| ||||| ||||||||||||||||| Sbjct: 33138 ccctttgctgaggccaatgctggagactctggtgcggctgcaggatcaaaggactacgtt 33079 Query: 133 catgtacgcatccagcagcgtaatggtcgcaagagcctgaccactgtccaggg 185 |||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 33078 catgtacgcatccagcagcgtaatggccgtaagagcctgaccactgtccaggg 33026 Score = 107 bits (54), Expect = 4e-20 Identities = 57/58 (98%) Strand = Plus / Minus Query: 220 caggcgggcattgtgaagaaggaacacatcaagattcatggtttctgagcaactgcca 277 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32680 caggccggcattgtgaagaaggaacacatcaagattcatggtttctgagcaactgcca 32623 Score = 79.8 bits (40), Expect = 8e-12 Identities = 56/60 (93%), Gaps = 1/60 (1%) Strand = Plus / Minus Query: 6 tgaagaaggagttcagctacagcaagnatcctcaaagacctcaagaaagagttttgctgc 65 |||||||||| |||||||||| |||| ||||||||||| ||||||||||||||||||||| Sbjct: 33023 tgaagaaggaattcagctacaacaag-atcctcaaagatctcaagaaagagttttgctgc 32965 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Minus Query: 181 cagggtgatcagaggaagaacgtctcaaacttccttgtccagg 223 ||||||||||||||||| ||||| ||||| || ||||| |||| Sbjct: 32825 cagggtgatcagaggaaaaacgtatcaaattttcttgttcagg 32783
>gb|BT016285.1| Zea mays clone Contig118 mRNA sequence Length = 861 Score = 147 bits (74), Expect = 4e-32 Identities = 89/94 (94%) Strand = Plus / Plus Query: 179 tccagggtgatcagaggaagaacgtctcaaacttccttgtccaggcgggcattgtgaaga 238 |||||||||||||||||||||||||||| || ||||| |||||||| ||||||||||||| Sbjct: 505 tccagggtgatcagaggaagaacgtctcgaatttcctcgtccaggccggcattgtgaaga 564 Query: 239 aggaacacatcaagattcatggtttctgagcaac 272 |||| ||||||||||||||||||||||||||||| Sbjct: 565 aggagcacatcaagattcatggtttctgagcaac 598 Score = 127 bits (64), Expect = 4e-26 Identities = 109/124 (87%) Strand = Plus / Plus Query: 62 ctgcctttgacccctttgccgaggcgaatgctggggacgctggtgcagctgccggatcaa 121 ||||||| || ||||| || ||||| |||||||||||| ||||||| || || || |||| Sbjct: 274 ctgccttcgatcccttcgctgaggccaatgctggggactctggtgcggcagcagggtcaa 333 Query: 122 aggactacgtgcatgtacgcatccagcagcgtaatggtcgcaagagcctgaccactgtcc 181 |||||||||| || || ||||||||||||||||||||||||||||||||||| || |||| Sbjct: 334 aggactacgtacacgtgcgcatccagcagcgtaatggtcgcaagagcctgactaccgtcc 393 Query: 182 aggg 185 |||| Sbjct: 394 aggg 397 Score = 87.7 bits (44), Expect = 3e-14 Identities = 57/60 (95%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 6 tgaagaaggagttcagctacagcaagnatcctcaaagacctcaagaaagagttttgctgc 65 |||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||| Sbjct: 400 tgaagaaggagttcagctacagcaag-atcctcaaagatctcaagaaagagttctgctgc 458
>emb|AJ242801.1|SST242801 Sporobolus stapfianus partial mRNA for putative translation initiation factor eIF-1 Length = 796 Score = 147 bits (74), Expect = 4e-32 Identities = 92/98 (93%) Strand = Plus / Plus Query: 181 cagggtgatcagaggaagaacgtctcaaacttccttgtccaggcgggcattgtgaagaag 240 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| Sbjct: 429 cagggtgatcagaggaagaacgtctcaaatttccttgtccaggccggcattgtgaaaaag 488 Query: 241 gaacacatcaagattcatggtttctgagcaactgccag 278 || |||||||| ||||||||||| |||||||||||||| Sbjct: 489 gagcacatcaaaattcatggtttttgagcaactgccag 526 Score = 145 bits (73), Expect = 2e-31 Identities = 112/125 (89%) Strand = Plus / Plus Query: 62 ctgcctttgacccctttgccgaggcgaatgctggggacgctggtgcagctgccggatcaa 121 ||||||| || |||||| | ||||| |||||||||||| ||||||| ||||| ||||||| Sbjct: 196 ctgccttcgatcccttttctgaggccaatgctggggactctggtgcggctgcaggatcaa 255 Query: 122 aggactacgtgcatgtacgcatccagcagcgtaatggtcgcaagagcctgaccactgtcc 181 |||||||||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| | Sbjct: 256 aggactacgttcatgtgcgcatccagcagcgtaatggtcgcaagagtctgacgactgttc 315 Query: 182 agggt 186 ||||| Sbjct: 316 agggt 320 Score = 65.9 bits (33), Expect = 1e-07 Identities = 58/65 (89%), Gaps = 1/65 (1%) Strand = Plus / Plus Query: 1 gggtctgaagaaggagttcagctacagcaagnatcctcaaagacctcaagaaagagtttt 60 |||| |||||||||| |||||||||| |||| ||||| |||||||||||||| ||||| | Sbjct: 317 gggtttgaagaaggaattcagctacaacaag-atcctgaaagacctcaagaaggagttct 375 Query: 61 gctgc 65 ||||| Sbjct: 376 gctgc 380 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Plus Query: 462 ccatcgttagatggcttgttaccctctcccatcaaggttgaataa 506 |||||||| |||||||||||||||| || | ||||| |||||||| Sbjct: 718 ccatcgtttgatggcttgttaccctttctcgtcaagattgaataa 762
>gb|AY103847.1| Zea mays PCO105184 mRNA sequence Length = 1006 Score = 147 bits (74), Expect = 4e-32 Identities = 89/94 (94%) Strand = Plus / Plus Query: 179 tccagggtgatcagaggaagaacgtctcaaacttccttgtccaggcgggcattgtgaaga 238 |||||||||||||||||||||||||||| || ||||| |||||||| ||||||||||||| Sbjct: 623 tccagggtgatcagaggaagaacgtctcgaatttcctcgtccaggccggcattgtgaaga 682 Query: 239 aggaacacatcaagattcatggtttctgagcaac 272 |||| ||||||||||||||||||||||||||||| Sbjct: 683 aggagcacatcaagattcatggtttctgagcaac 716 Score = 127 bits (64), Expect = 4e-26 Identities = 109/124 (87%) Strand = Plus / Plus Query: 62 ctgcctttgacccctttgccgaggcgaatgctggggacgctggtgcagctgccggatcaa 121 ||||||| || ||||| || ||||| |||||||||||| ||||||| || || || |||| Sbjct: 392 ctgccttcgatcccttcgctgaggccaatgctggggactctggtgcggcagcagggtcaa 451 Query: 122 aggactacgtgcatgtacgcatccagcagcgtaatggtcgcaagagcctgaccactgtcc 181 |||||||||| || || ||||||||||||||||||||||||||||||||||| || |||| Sbjct: 452 aggactacgtacacgtgcgcatccagcagcgtaatggtcgcaagagcctgactaccgtcc 511 Query: 182 aggg 185 |||| Sbjct: 512 aggg 515 Score = 87.7 bits (44), Expect = 3e-14 Identities = 57/60 (95%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 6 tgaagaaggagttcagctacagcaagnatcctcaaagacctcaagaaagagttttgctgc 65 |||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||| Sbjct: 518 tgaagaaggagttcagctacagcaag-atcctcaaagatctcaagaaagagttctgctgc 576
>gb|AF034944.1|AF034944 Zea mays translation initiation factor GOS2 (TIF) mRNA, complete cds Length = 759 Score = 147 bits (74), Expect = 4e-32 Identities = 89/94 (94%) Strand = Plus / Plus Query: 179 tccagggtgatcagaggaagaacgtctcaaacttccttgtccaggcgggcattgtgaaga 238 |||||||||||||||||||||||||||| || ||||| |||||||| ||||||||||||| Sbjct: 395 tccagggtgatcagaggaagaacgtctcgaatttcctcgtccaggccggcattgtgaaga 454 Query: 239 aggaacacatcaagattcatggtttctgagcaac 272 |||| ||||||||||||||||||||||||||||| Sbjct: 455 aggagcacatcaagattcatggtttctgagcaac 488 Score = 135 bits (68), Expect = 2e-28 Identities = 110/124 (88%) Strand = Plus / Plus Query: 62 ctgcctttgacccctttgccgaggcgaatgctggggacgctggtgcagctgccggatcaa 121 ||||||| || ||||| || ||||| |||||||||||| ||||||| || || || |||| Sbjct: 164 ctgccttcgatcccttcgctgaggccaatgctggggactctggtgcggcagcagggtcaa 223 Query: 122 aggactacgtgcatgtacgcatccagcagcgtaatggtcgcaagagcctgaccactgtcc 181 |||||||||| || || |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 224 aggactacgtacacgtgcgcatccagcagcgtaatggtcgcaagagcctgaccaccgtcc 283 Query: 182 aggg 185 |||| Sbjct: 284 aggg 287 Score = 87.7 bits (44), Expect = 3e-14 Identities = 57/60 (95%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 6 tgaagaaggagttcagctacagcaagnatcctcaaagacctcaagaaagagttttgctgc 65 |||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||| Sbjct: 290 tgaagaaggagttcagctacagcaag-atcctcaaagatctcaagaaagagttctgctgc 348
>dbj|D10959.1|RIC407GS2 Oryza sativa mRNA for GOS2 Length = 366 Score = 125 bits (63), Expect = 2e-25 Identities = 90/99 (90%) Strand = Plus / Plus Query: 179 tccagggtgatcagaggaagaacgtctcaaacttccttgtccaggcgggcattgtgaaga 238 |||||||||| |||||||| ||||| |||| || ||||| ||||| ||||||||||||| Sbjct: 53 tccagggtgaacagaggaaaaacgtaccaaattttcttgttcaggccggcattgtgaaga 112 Query: 239 aggaacacatcaagattcatggtttctgagcaactgcca 277 ||||||||||||||| ||||||||||||||||||||||| Sbjct: 113 aggaacacatcaagaatcatggtttctgagcaactgcca 151
>gb|BT013323.1| Lycopersicon esculentum clone 135043R, mRNA sequence Length = 787 Score = 89.7 bits (45), Expect = 9e-15 Identities = 78/89 (87%) Strand = Plus / Plus Query: 179 tccagggtgatcagaggaagaacgtctcaaacttccttgtccaggcgggcattgtgaaga 238 |||||||||||||||| |||||||| || | || ||||||||||| || || ||||||| Sbjct: 423 tccagggtgatcagagaaagaacgtttctacatttcttgtccaggctggaatcgtgaaga 482 Query: 239 aggaacacatcaagattcatggtttctga 267 | ||||||||||| ||||||||||||||| Sbjct: 483 aagaacacatcaaaattcatggtttctga 511 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 42 gacctcaagaaagagttttgctgc 65 ||||| |||||||||||||||||| Sbjct: 353 gaccttaagaaagagttttgctgc 376
>dbj|AB003378.1| Salix bakko mRNA for SUI1 homolog, complete cds Length = 700 Score = 89.7 bits (45), Expect = 9e-15 Identities = 75/85 (88%) Strand = Plus / Plus Query: 181 cagggtgatcagaggaagaacgtctcaaacttccttgtccaggcgggcattgtgaagaag 240 ||||||||||| |||||||||||||| |||||| || ||||| || |||||||||||| Sbjct: 394 cagggtgatcaaaggaagaacgtctcctccttcctcgtgcaggctggtattgtgaagaag 453 Query: 241 gaacacatcaagattcatggtttct 265 ||| | ||||||||||||||||||| Sbjct: 454 gaaaatatcaagattcatggtttct 478 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 42 gacctcaagaaagagttttgctgc 65 ||||||||||||||||| |||||| Sbjct: 322 gacctcaagaaagagttctgctgc 345
>gb|BT013262.1| Lycopersicon esculentum clone 134804F, mRNA sequence Length = 1343 Score = 85.7 bits (43), Expect = 1e-13 Identities = 76/87 (87%) Strand = Plus / Plus Query: 181 cagggtgatcagaggaagaacgtctcaaacttccttgtccaggcgggcattgtgaagaag 240 |||||||| |||||||||||||| || | ||| ||||||||||| || || |||||||| Sbjct: 1028 cagggtgaccagaggaagaacgtttctacctttcttgtccaggctggaatcgtgaagaaa 1087 Query: 241 gaacacatcaagattcatggtttctga 267 || |||||||| ||||||||||||||| Sbjct: 1088 gagcacatcaaaattcatggtttctga 1114
>ref|NM_118847.2| Arabidopsis thaliana translation initiation factor AT4G27130 mRNA, complete cds Length = 811 Score = 79.8 bits (40), Expect = 8e-12 Identities = 73/84 (86%) Strand = Plus / Plus Query: 187 gatcagaggaagaacgtctcaaacttccttgtccaggcgggcattgtgaagaaggaacac 246 |||||||||||||||||||| | ||||| |||||||| || |||||||||| || || Sbjct: 512 gatcagaggaagaacgtctccacgttcctagtccaggctgggcttgtgaagaaagataac 571 Query: 247 atcaagattcatggtttctgagca 270 |||||||| ||||||||||||||| Sbjct: 572 atcaagatccatggtttctgagca 595 Score = 50.1 bits (25), Expect = 0.007 Identities = 53/61 (86%), Gaps = 1/61 (1%) Strand = Plus / Plus Query: 5 ctgaagaaggagttcagctacagcaagnatcctcaaagacctcaagaaagagttttgctg 64 |||||||| |||| |||||||| |||| || || || |||||||||||||| |||||||| Sbjct: 398 ctgaagaaagagtacagctacaccaag-atacttaaggacctcaagaaagaattttgctg 456 Query: 65 c 65 | Sbjct: 457 c 457
>gb|DQ083225.1| Oryza sativa (indica cultivar-group) clone 5B11G73 mRNA sequence Length = 268 Score = 79.8 bits (40), Expect = 8e-12 Identities = 67/76 (88%) Strand = Plus / Plus Query: 62 ctgcctttgacccctttgccgaggcgaatgctggggacgctggtgcagctgccggatcaa 121 ||||||| || |||||||| ||||| |||||||| ||| ||||||| ||||| ||||||| Sbjct: 193 ctgccttcgatccctttgctgaggccaatgctggagactctggtgcggctgcaggatcaa 252 Query: 122 aggactacgtgcatgt 137 |||||||||| ||||| Sbjct: 253 aggactacgttcatgt 268
>gb|AY037234.1| Arabidopsis thaliana AT4g27130/T24A18_80 mRNA, complete cds Length = 737 Score = 79.8 bits (40), Expect = 8e-12 Identities = 73/84 (86%) Strand = Plus / Plus Query: 187 gatcagaggaagaacgtctcaaacttccttgtccaggcgggcattgtgaagaaggaacac 246 |||||||||||||||||||| | ||||| |||||||| || |||||||||| || || Sbjct: 464 gatcagaggaagaacgtctccacgttcctagtccaggctgggcttgtgaagaaagataac 523 Query: 247 atcaagattcatggtttctgagca 270 |||||||| ||||||||||||||| Sbjct: 524 atcaagatccatggtttctgagca 547 Score = 50.1 bits (25), Expect = 0.007 Identities = 53/61 (86%), Gaps = 1/61 (1%) Strand = Plus / Plus Query: 5 ctgaagaaggagttcagctacagcaagnatcctcaaagacctcaagaaagagttttgctg 64 |||||||| |||| |||||||| |||| || || || |||||||||||||| |||||||| Sbjct: 350 ctgaagaaagagtacagctacaccaag-atacttaaggacctcaagaaagaattttgctg 408 Query: 65 c 65 | Sbjct: 409 c 409
>emb|BX828314.1|CNS0A3U9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH75ZH04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 738 Score = 79.8 bits (40), Expect = 8e-12 Identities = 73/84 (86%) Strand = Plus / Plus Query: 187 gatcagaggaagaacgtctcaaacttccttgtccaggcgggcattgtgaagaaggaacac 246 |||||||||||||||||||| | ||||| |||||||| || |||||||||| || || Sbjct: 441 gatcagaggaagaacgtctccacgttcctagtccaggctgggcttgtgaagaaagataac 500 Query: 247 atcaagattcatggtttctgagca 270 |||||||| ||||||||||||||| Sbjct: 501 atcaagatccatggtttctgagca 524 Score = 50.1 bits (25), Expect = 0.007 Identities = 53/61 (86%), Gaps = 1/61 (1%) Strand = Plus / Plus Query: 5 ctgaagaaggagttcagctacagcaagnatcctcaaagacctcaagaaagagttttgctg 64 |||||||| |||| |||||||| |||| || || || |||||||||||||| |||||||| Sbjct: 327 ctgaagaaagagtacagctacaccaag-atacttaaggacctcaagaaagaattttgctg 385 Query: 65 c 65 | Sbjct: 386 c 386
>emb|BX828730.1|CNS0A3GG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL33ZF02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 735 Score = 79.8 bits (40), Expect = 8e-12 Identities = 73/84 (86%) Strand = Plus / Plus Query: 187 gatcagaggaagaacgtctcaaacttccttgtccaggcgggcattgtgaagaaggaacac 246 |||||||||||||||||||| | ||||| |||||||| || |||||||||| || || Sbjct: 442 gatcagaggaagaacgtctccacgttcctagtccaggctgggcttgtgaagaaagataac 501 Query: 247 atcaagattcatggtttctgagca 270 |||||||| ||||||||||||||| Sbjct: 502 atcaagatccatggtttctgagca 525 Score = 50.1 bits (25), Expect = 0.007 Identities = 53/61 (86%), Gaps = 1/61 (1%) Strand = Plus / Plus Query: 5 ctgaagaaggagttcagctacagcaagnatcctcaaagacctcaagaaagagttttgctg 64 |||||||| |||| |||||||| |||| || || || |||||||||||||| |||||||| Sbjct: 328 ctgaagaaagagtacagctacaccaag-atacttaaggacctcaagaaagaattttgctg 386 Query: 65 c 65 | Sbjct: 387 c 387
>gb|AY088288.1| Arabidopsis thaliana clone 5206 mRNA, complete sequence Length = 805 Score = 79.8 bits (40), Expect = 8e-12 Identities = 73/84 (86%) Strand = Plus / Plus Query: 187 gatcagaggaagaacgtctcaaacttccttgtccaggcgggcattgtgaagaaggaacac 246 |||||||||||||||||||| | ||||| |||||||| || |||||||||| || || Sbjct: 512 gatcagaggaagaacgtctccacgttcctagtccaggctgggcttgtgaagaaagataac 571 Query: 247 atcaagattcatggtttctgagca 270 |||||||| ||||||||||||||| Sbjct: 572 atcaagatccatggtttctgagca 595 Score = 50.1 bits (25), Expect = 0.007 Identities = 53/61 (86%), Gaps = 1/61 (1%) Strand = Plus / Plus Query: 5 ctgaagaaggagttcagctacagcaagnatcctcaaagacctcaagaaagagttttgctg 64 |||||||| |||| |||||||| |||| || || || |||||||||||||| |||||||| Sbjct: 398 ctgaagaaagagtacagctacaccaag-atacttaaggacctcaagaaagaattttgctg 456 Query: 65 c 65 | Sbjct: 457 c 457
>gb|AF098672.1|AF098672 Brassica oleracea translation initiation factor nps45 mRNA, complete cds Length = 560 Score = 79.8 bits (40), Expect = 8e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 190 cagaggaagaacgtctcaaacttccttgtccaggcgggcattgtgaagaaggaacacatc 249 ||||||||||||||||| | |||||||||||||| || ||||||||||||| ||||| Sbjct: 292 cagaggaagaacgtctccacgttccttgtccaggctgggcttgtgaagaaggacgacatc 351 Query: 250 aagattcatggtttctgagc 269 |||| |||||||||||||| Sbjct: 352 cagatccatggtttctgagc 371 Score = 42.1 bits (21), Expect = 1.8 Identities = 49/57 (85%), Gaps = 1/57 (1%) Strand = Plus / Plus Query: 5 ctgaagaaggagttcagctacagcaagnatcctcaaagacctcaagaaagagttttg 61 |||||||| |||| |||||||| |||| || || || || ||||||||||||||||| Sbjct: 175 ctgaagaaagagtacagctacaccaag-atacttaaggatctcaagaaagagttttg 230 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 145 cagcagcgtaatggtcgcaagagcctgaccactgtccaggg 185 ||||||||||||||| | || ||| |||| ||||||||||| Sbjct: 133 cagcagcgtaatggtaggaaaagcttgacaactgtccaggg 173
>gb|AY060537.1| Arabidopsis thaliana AT4g27130/T24A18_80 mRNA, complete cds Length = 342 Score = 73.8 bits (37), Expect = 5e-10 Identities = 70/81 (86%) Strand = Plus / Plus Query: 187 gatcagaggaagaacgtctcaaacttccttgtccaggcgggcattgtgaagaaggaacac 246 |||||||||||||||||||| | ||||| |||||||| || |||||||||| || || Sbjct: 262 gatcagaggaagaacgtctccacgttcctagtccaggctgggcttgtgaagaaagataac 321 Query: 247 atcaagattcatggtttctga 267 |||||||| |||||||||||| Sbjct: 322 atcaagatccatggtttctga 342 Score = 50.1 bits (25), Expect = 0.007 Identities = 53/61 (86%), Gaps = 1/61 (1%) Strand = Plus / Plus Query: 5 ctgaagaaggagttcagctacagcaagnatcctcaaagacctcaagaaagagttttgctg 64 |||||||| |||| |||||||| |||| || || || |||||||||||||| |||||||| Sbjct: 148 ctgaagaaagagtacagctacaccaag-atacttaaggacctcaagaaagaattttgctg 206 Query: 65 c 65 | Sbjct: 207 c 207
>gb|DQ222518.1| Solanum tuberosum clone 120A06 unknown mRNA Length = 699 Score = 69.9 bits (35), Expect = 8e-09 Identities = 74/87 (85%) Strand = Plus / Plus Query: 181 cagggtgatcagaggaagaacgtctcaaacttccttgtccaggcgggcattgtgaagaag 240 |||| ||| ||| |||||||||| || | || ||||||||||| || ||||||||||| Sbjct: 401 caggatgaccagcggaagaacgtttctacatttcttgtccaggctggaattgtgaagaaa 460 Query: 241 gaacacatcaagattcatggtttctga 267 || |||||||| ||||||||||||||| Sbjct: 461 gagcacatcaaaattcatggtttctga 487
>emb|AJ519839.1|CAR519839 Coffea arabica mRNA for SUI1 protein Length = 678 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 187 gatcagaggaagaacgtctcaaacttccttgtccaggcgggcattgtgaagaaggaacac 246 |||||| | ||||| || |||| ||||||||| ||||| || || || |||||||||||| Sbjct: 396 gatcagcgtaagaatgtttcaagcttccttgttcaggctgggatcgtaaagaaggaacac 455 Query: 247 atcaagattcatggttt 263 || |||||||||||||| Sbjct: 456 ataaagattcatggttt 472 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 33 atcctcaaagacctcaagaaagagttttgctgc 65 ||||| || |||||||||||||||||||||||| Sbjct: 309 atcctgaaggacctcaagaaagagttttgctgc 341
>gb|AY104121.1| Zea mays PCO141133 mRNA sequence Length = 815 Score = 65.9 bits (33), Expect = 1e-07 Identities = 102/125 (81%) Strand = Plus / Plus Query: 62 ctgcctttgacccctttgccgaggcgaatgctggggacgctggtgcagctgccggatcaa 121 |||||||||| || ||||| ||||| ||||||| |||| ||||||| | | | ||| | | Sbjct: 194 ctgcctttgatccgtttgctgaggcaaatgctgaggactctggtgctggtcctggaacga 253 Query: 122 aggactacgtgcatgtacgcatccagcagcgtaatggtcgcaagagcctgaccactgtcc 181 |||| || |||||||| |||||||||||||| || || | ||||| ||||| || |||| Sbjct: 254 aggattatgtgcatgtgcgcatccagcagcgcaacggcagaaagagtctgactacagtcc 313 Query: 182 agggt 186 ||||| Sbjct: 314 agggt 318 Score = 42.1 bits (21), Expect = 1.8 Identities = 55/65 (84%), Gaps = 1/65 (1%) Strand = Plus / Plus Query: 1 gggtctgaagaaggagttcagctacagcaagnatcctcaaagacctcaagaaagagtttt 60 |||||||||||| ||||||||||| | |||| |||||||| || || ||||| || || | Sbjct: 315 gggtctgaagaaagagttcagctataacaag-atcctcaaggatctgaagaaggaattct 373 Query: 61 gctgc 65 ||||| Sbjct: 374 gctgc 378
>ref|NM_104307.3| Arabidopsis thaliana translation initiation factor AT1G54290 mRNA, complete cds Length = 811 Score = 63.9 bits (32), Expect = 5e-07 Identities = 74/88 (84%) Strand = Plus / Plus Query: 184 ggtgatcagaggaagaacgtctcaaacttccttgtccaggcgggcattgtgaagaaggaa 243 |||||||||||||||||||| || | |||||||| ||||| || ||||||||||||| Sbjct: 503 ggtgatcagaggaagaacgtatctacgttccttgttcaggctgggcttgtgaagaaggat 562 Query: 244 cacatcaagattcatggtttctgagcaa 271 |||| || || |||||||| ||||||| Sbjct: 563 aacataaaaatccatggtttttgagcaa 590 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 145 cagcagcgtaatggtcgcaagagcctgaccactgtccaggg 185 ||||||||||||||| | || ||| |||| ||||||||||| Sbjct: 350 cagcagcgtaatggtagaaaaagcttgacaactgtccaggg 390
>gb|AF372910.1|AF372910 Arabidopsis thaliana At1g54290/F20D21_53 mRNA, complete cds Length = 742 Score = 63.9 bits (32), Expect = 5e-07 Identities = 74/88 (84%) Strand = Plus / Plus Query: 184 ggtgatcagaggaagaacgtctcaaacttccttgtccaggcgggcattgtgaagaaggaa 243 |||||||||||||||||||| || | |||||||| ||||| || ||||||||||||| Sbjct: 441 ggtgatcagaggaagaacgtatctacgttccttgttcaggctgggcttgtgaagaaggat 500 Query: 244 cacatcaagattcatggtttctgagcaa 271 |||| || || |||||||| ||||||| Sbjct: 501 aacataaaaatccatggtttttgagcaa 528 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 145 cagcagcgtaatggtcgcaagagcctgaccactgtccaggg 185 ||||||||||||||| | || ||| |||| ||||||||||| Sbjct: 288 cagcagcgtaatggtagaaaaagcttgacaactgtccaggg 328
>emb|BX817291.1|CNS0ACKO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL12ZC05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 748 Score = 63.9 bits (32), Expect = 5e-07 Identities = 74/88 (84%) Strand = Plus / Plus Query: 184 ggtgatcagaggaagaacgtctcaaacttccttgtccaggcgggcattgtgaagaaggaa 243 |||||||||||||||||||| || | |||||||| ||||| || ||||||||||||| Sbjct: 440 ggtgatcagaggaagaacgtatctacgttccttgttcaggctgggcttgtgaagaaggat 499 Query: 244 cacatcaagattcatggtttctgagcaa 271 |||| || || |||||||| ||||||| Sbjct: 500 aacataaaaatccatggtttttgagcaa 527 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 145 cagcagcgtaatggtcgcaagagcctgaccactgtccaggg 185 ||||||||||||||| | || ||| |||| ||||||||||| Sbjct: 287 cagcagcgtaatggtagaaaaagcttgacaactgtccaggg 327
>ref|NM_124857.2| Arabidopsis thaliana translation initiation factor AT5G54760 mRNA, complete cds Length = 706 Score = 60.0 bits (30), Expect = 8e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 196 aagaacgtctcaaacttccttgtccaggcgggcattgtgaagaaggaacacatcaagatt 255 ||||||||||| | |||||||||||||| || | ||||||||||| |||||||||| Sbjct: 417 aagaacgtctccacattccttgtccaggctggtttggtgaagaaggataacatcaagatc 476 Query: 256 catggtttct 265 |||||||||| Sbjct: 477 catggtttct 486 Score = 50.1 bits (25), Expect = 0.007 Identities = 53/61 (86%), Gaps = 1/61 (1%) Strand = Plus / Plus Query: 5 ctgaagaaggagttcagctacagcaagnatcctcaaagacctcaagaaagagttttgctg 64 |||||||| |||| |||||| | |||| || || || ||||||||||||||||||||||| Sbjct: 294 ctgaagaaagagtacagctataccaag-atacttaaggacctcaagaaagagttttgctg 352 Query: 65 c 65 | Sbjct: 353 c 353
>gb|BT005836.1| Arabidopsis thaliana At5g54760 gene, complete cds Length = 342 Score = 60.0 bits (30), Expect = 8e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 196 aagaacgtctcaaacttccttgtccaggcgggcattgtgaagaaggaacacatcaagatt 255 ||||||||||| | |||||||||||||| || | ||||||||||| |||||||||| Sbjct: 271 aagaacgtctccacattccttgtccaggctggtttggtgaagaaggataacatcaagatc 330 Query: 256 catggtttct 265 |||||||||| Sbjct: 331 catggtttct 340 Score = 50.1 bits (25), Expect = 0.007 Identities = 53/61 (86%), Gaps = 1/61 (1%) Strand = Plus / Plus Query: 5 ctgaagaaggagttcagctacagcaagnatcctcaaagacctcaagaaagagttttgctg 64 |||||||| |||| |||||| | |||| || || || ||||||||||||||||||||||| Sbjct: 148 ctgaagaaagagtacagctataccaag-atacttaaggacctcaagaaagagttttgctg 206 Query: 65 c 65 | Sbjct: 207 c 207
>gb|BT000649.1| Arabidopsis thaliana putative protein translation factor Sui1 homolog (At1g54290/F20D21_53) mRNA, complete cds Length = 342 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 184 ggtgatcagaggaagaacgtctcaaacttccttgtccaggcgggcattgtgaagaaggaa 243 |||||||||||||||||||| || | |||||||| ||||| || ||||||||||||| Sbjct: 259 ggtgatcagaggaagaacgtatctacgttccttgttcaggctgggcttgtgaagaaggat 318 Query: 244 cacatcaagattcatggttt 263 |||| || || |||||||| Sbjct: 319 aacataaaaatccatggttt 338 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 145 cagcagcgtaatggtcgcaagagcctgaccactgtccaggg 185 ||||||||||||||| | || ||| |||| ||||||||||| Sbjct: 106 cagcagcgtaatggtagaaaaagcttgacaactgtccaggg 146
>gb|L41693.1|PS300016E Eucalyptus globulus bicostata symbiont (F00058) mRNA, ESTun016 Length = 256 Score = 56.0 bits (28), Expect = 1e-04 Identities = 56/64 (87%), Gaps = 1/64 (1%) Strand = Plus / Plus Query: 2 ggtctgaagaaggagttcagctacagcaagnatcctcaaagacctcaagaaagagttttg 61 ||||||||||||||||||||||| | |||| || ||||| ||||| |||||| | ||||| Sbjct: 170 ggtctgaagaaggagttcagctataacaag-atactcaaggacctgaagaaacaattttg 228 Query: 62 ctgc 65 |||| Sbjct: 229 ctgc 232
>gb|AC146555.5| Medicago truncatula clone mth2-10p14, complete sequence Length = 127640 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 220 caggcgggcattgtgaagaaggaacacatcaagattcatggtttctgagca 270 ||||| || |||||||||||||| || || || |||||||||||||||||| Sbjct: 54724 caggctggaattgtgaagaaggagcatattaaaattcatggtttctgagca 54774 Score = 42.1 bits (21), Expect = 1.8 Identities = 57/69 (82%) Strand = Plus / Plus Query: 117 atcaaaggactacgtgcatgtacgcatccagcagcgtaatggtcgcaagagcctgaccac 176 ||||||||| ||||| ||| | || || |||||||| |||||| | || ||| |||| || Sbjct: 53528 atcaaaggagtacgtccatattcgtatacagcagcgaaatggtagaaaaagcttgacaac 53587 Query: 177 tgtccaggg 185 ||||||||| Sbjct: 53588 tgtccaggg 53596
>emb|AJ718439.1| Nicotiana tabacum cDNA-AFLP-fragment BSTC1-12-240, cultivar Bright Yellow 2 Length = 188 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 214 cttgtccaggcgggcattgtgaagaaggaacacatcaagattcatggtttctga 267 ||||||||||| | || |||||||| || |||||||| ||||||||||||||| Sbjct: 41 cttgtccaggctgaaatcgtgaagaaagagcacatcaaaattcatggtttctga 94
>gb|AY365040.1| Zea mays translation initiation factor-like gene, partial sequence Length = 656 Score = 50.1 bits (25), Expect = 0.007 Identities = 56/65 (86%), Gaps = 1/65 (1%) Strand = Plus / Plus Query: 1 gggtctgaagaaggagttcagctacagcaagnatcctcaaagacctcaagaaagagtttt 60 |||||||||||||||||||||||| | |||| |||||||| || || ||||| || || | Sbjct: 450 gggtctgaagaaggagttcagctataacaag-atcctcaaggatctgaagaaggaattct 508 Query: 61 gctgc 65 ||||| Sbjct: 509 gctgc 513 Score = 46.1 bits (23), Expect = 0.12 Identities = 89/111 (80%) Strand = Plus / Plus Query: 76 tttgccgaggcgaatgctggggacgctggtgcagctgccggatcaaaggactacgtgcat 135 ||||| ||||| ||||||| || | ||||||| | | | ||| | ||||| || |||||| Sbjct: 343 tttgctgaggcaaatgctgagggctctggtgctggtcctggaacgaaggattatgtgcat 402 Query: 136 gtacgcatccagcagcgtaatggtcgcaagagcctgaccactgtccagggt 186 || |||||||||||||| || || | ||||| ||||| || ||||||||| Sbjct: 403 gtgcgcatccagcagcgcaacggcagaaagagtctgactacagtccagggt 453
>emb|AL161566.2|ATCHRIV66 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 66 Length = 198372 Score = 50.1 bits (25), Expect = 0.007 Identities = 53/61 (86%), Gaps = 1/61 (1%) Strand = Plus / Minus Query: 5 ctgaagaaggagttcagctacagcaagnatcctcaaagacctcaagaaagagttttgctg 64 |||||||| |||| |||||||| |||| || || || |||||||||||||| |||||||| Sbjct: 109067 ctgaagaaagagtacagctacaccaag-atacttaaggacctcaagaaagaattttgctg 109009 Query: 65 c 65 | Sbjct: 109008 c 109008 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 230 ttgtgaagaaggaacacatcaagattcatggtttctgagca 270 |||||||||| || |||||||||| ||||||||||||||| Sbjct: 108706 ttgtgaagaaagataacatcaagatccatggtttctgagca 108666 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Minus Query: 187 gatcagaggaagaacgtctcaaacttccttgtccagg 223 |||||||||||||||||||| | ||||| ||||||| Sbjct: 108829 gatcagaggaagaacgtctccacgttcctagtccagg 108793
>emb|AL035680.1|ATT24A18 Arabidopsis thaliana DNA chromosome 4, BAC clone T24A18, partial sequence (ESSA project) Length = 45980 Score = 50.1 bits (25), Expect = 0.007 Identities = 53/61 (86%), Gaps = 1/61 (1%) Strand = Plus / Minus Query: 5 ctgaagaaggagttcagctacagcaagnatcctcaaagacctcaagaaagagttttgctg 64 |||||||| |||| |||||||| |||| || || || |||||||||||||| |||||||| Sbjct: 25556 ctgaagaaagagtacagctacaccaag-atacttaaggacctcaagaaagaattttgctg 25498 Query: 65 c 65 | Sbjct: 25497 c 25497 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 230 ttgtgaagaaggaacacatcaagattcatggtttctgagca 270 |||||||||| || |||||||||| ||||||||||||||| Sbjct: 25195 ttgtgaagaaagataacatcaagatccatggtttctgagca 25155 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Minus Query: 187 gatcagaggaagaacgtctcaaacttccttgtccagg 223 |||||||||||||||||||| | ||||| ||||||| Sbjct: 25318 gatcagaggaagaacgtctccacgttcctagtccagg 25282
>emb|AJ519840.1|CAR519840 Coffea arabica sui1 gene, exons 1-5 Length = 2677 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 33 atcctcaaagacctcaagaaagagttttgctgc 65 ||||| || |||||||||||||||||||||||| Sbjct: 2056 atcctgaaggacctcaagaaagagttttgctgc 2088 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Plus Query: 235 aagaaggaacacatcaagattcatggtt 262 |||||||||||||| ||||||||||||| Sbjct: 2605 aagaaggaacacataaagattcatggtt 2632
>dbj|AB005232.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBG8 Length = 80315 Score = 50.1 bits (25), Expect = 0.007 Identities = 53/61 (86%), Gaps = 1/61 (1%) Strand = Plus / Plus Query: 5 ctgaagaaggagttcagctacagcaagnatcctcaaagacctcaagaaagagttttgctg 64 |||||||| |||| |||||| | |||| || || || ||||||||||||||||||||||| Sbjct: 4070 ctgaagaaagagtacagctataccaag-atacttaaggacctcaagaaagagttttgctg 4128 Query: 65 c 65 | Sbjct: 4129 c 4129 Score = 44.1 bits (22), Expect = 0.46 Identities = 31/34 (91%) Strand = Plus / Plus Query: 232 gtgaagaaggaacacatcaagattcatggtttct 265 ||||||||||| |||||||||| |||||||||| Sbjct: 4485 gtgaagaaggataacatcaagatccatggtttct 4518
>gb|U81042.1|ATU81042 Arabidopsis thaliana translation initiation factor gene, complete cds Length = 1787 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 230 ttgtgaagaaggaacacatcaagattcatggtttctgagca 270 |||||||||| || |||||||||| ||||||||||||||| Sbjct: 1562 ttgtgaagaaagataacatcaagatccatggtttctgagca 1602 Score = 50.1 bits (25), Expect = 0.007 Identities = 53/61 (86%), Gaps = 1/61 (1%) Strand = Plus / Plus Query: 5 ctgaagaaggagttcagctacagcaagnatcctcaaagacctcaagaaagagttttgctg 64 |||||||| |||| |||||||| |||| || || || |||||||||||||| |||||||| Sbjct: 1201 ctgaagaaagagtacagctacaccaag-atacttaaggacctcaagaaagaattttgctg 1259 Query: 65 c 65 | Sbjct: 1260 c 1260 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Plus Query: 187 gatcagaggaagaacgtctcaaacttccttgtccagg 223 |||||||||||||||||||| | ||||| ||||||| Sbjct: 1439 gatcagaggaagaacgtctccacgttcctagtccagg 1475
>ref|XM_687061.1| PREDICTED: Danio rerio similar to beta-catenin 2 (LOC563701), mRNA Length = 3471 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Plus Query: 90 tgctggggacgctggtgcagctgc 113 |||||||||||||||||||||||| Sbjct: 1298 tgctggggacgctggtgcagctgc 1321
>gb|BC056276.1| Danio rerio catenin, beta 2, mRNA (cDNA clone MGC:65770 IMAGE:6789078), complete cds Length = 3600 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Plus Query: 90 tgctggggacgctggtgcagctgc 113 |||||||||||||||||||||||| Sbjct: 1363 tgctggggacgctggtgcagctgc 1386
>gb|AY617076.1| Bassia scoparia putative translation initiation factor mRNA, partial cds Length = 207 Score = 48.1 bits (24), Expect = 0.030 Identities = 55/64 (85%), Gaps = 1/64 (1%) Strand = Plus / Plus Query: 2 ggtctgaagaaggagttcagctacagcaagnatcctcaaagacctcaagaaagagttttg 61 |||||||||||||| ||||||||| ||| || |||||||||||||| || ||||| || Sbjct: 10 ggtctgaagaaggatttcagctacgagaag-atactcaaagacctcaaaaaggagttctg 68 Query: 62 ctgc 65 |||| Sbjct: 69 ctgc 72
>gb|AY108531.1| Zea mays PCO112988 mRNA sequence Length = 792 Score = 48.1 bits (24), Expect = 0.030 Identities = 99/124 (79%) Strand = Plus / Plus Query: 62 ctgcctttgacccctttgccgaggcgaatgctggggacgctggtgcagctgccggatcaa 121 |||| ||||| || ||||| ||||| ||||||| |||| | |||| | ||| ||||||| Sbjct: 201 ctgcttttgatccgtttgcagaggcaaatgctgaggactccagtgctggtgctggatcaa 260 Query: 122 aggactacgtgcatgtacgcatccagcagcgtaatggtcgcaagagcctgaccactgtcc 181 ||||||| ||||| || || || |||||||| || || | ||||| ||||| ||||| | Sbjct: 261 aggactatgtgcacgtgcgtattcagcagcgcaacggaaggaagagtctgacaactgttc 320 Query: 182 aggg 185 |||| Sbjct: 321 aggg 324
>ref|XM_475493.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 348 Score = 44.1 bits (22), Expect = 0.46 Identities = 31/34 (91%) Strand = Plus / Plus Query: 119 caaaggactacgtgcatgtacgcatccagcagcg 152 ||||||| || |||||||| |||||||||||||| Sbjct: 86 caaaggattatgtgcatgtgcgcatccagcagcg 119
>ref|XM_959252.1| Neurospora crassa OR74A hypothetical protein (NCU01981.1) partial mRNA Length = 510 Score = 44.1 bits (22), Expect = 0.46 Identities = 37/42 (88%) Strand = Plus / Plus Query: 145 cagcagcgtaatggtcgcaagagcctgaccactgtccagggt 186 |||||||||||||| ||||||| | |||| || ||||||||| Sbjct: 259 cagcagcgtaatggacgcaagaccttgactaccgtccagggt 300
>ref|XM_329170.1| Neurospora crassa OR74A hypothetical protein (NCU01981.1) partial mRNA Length = 510 Score = 44.1 bits (22), Expect = 0.46 Identities = 37/42 (88%) Strand = Plus / Plus Query: 145 cagcagcgtaatggtcgcaagagcctgaccactgtccagggt 186 |||||||||||||| ||||||| | |||| || ||||||||| Sbjct: 259 cagcagcgtaatggacgcaagaccttgactaccgtccagggt 300
>gb|AC130605.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0010D04, complete sequence Length = 122599 Score = 44.1 bits (22), Expect = 0.46 Identities = 31/34 (91%) Strand = Plus / Plus Query: 119 caaaggactacgtgcatgtacgcatccagcagcg 152 ||||||| || |||||||| |||||||||||||| Sbjct: 79790 caaaggattatgtgcatgtgcgcatccagcagcg 79823
>ref|XM_389056.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG08880.1) partial mRNA Length = 588 Score = 44.1 bits (22), Expect = 0.46 Identities = 43/50 (86%) Strand = Plus / Plus Query: 137 tacgcatccagcagcgtaatggtcgcaagagcctgaccactgtccagggt 186 ||||||| |||||||||||||| || |||| |||||||||| |||||| Sbjct: 335 tacgcattcagcagcgtaatggacgtaagactttgaccactgttcagggt 384
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.46 Identities = 31/34 (91%) Strand = Plus / Plus Query: 119 caaaggactacgtgcatgtacgcatccagcagcg 152 ||||||| || |||||||| |||||||||||||| Sbjct: 24394000 caaaggattatgtgcatgtgcgcatccagcagcg 24394033
>dbj|AK070301.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049M22, full insert sequence Length = 1410 Score = 44.1 bits (22), Expect = 0.46 Identities = 31/34 (91%) Strand = Plus / Plus Query: 119 caaaggactacgtgcatgtacgcatccagcagcg 152 ||||||| || |||||||| |||||||||||||| Sbjct: 923 caaaggattatgtgcatgtgcgcatccagcagcg 956
>gb|AC005287.4| Arabidopsis thaliana chromosome I BAC F20D21 genomic sequence, complete sequence Length = 143186 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Minus Query: 145 cagcagcgtaatggtcgcaagagcctgaccactgtccaggg 185 ||||||||||||||| | || ||| |||| ||||||||||| Sbjct: 40635 cagcagcgtaatggtagaaaaagcttgacaactgtccaggg 40595 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 ggtgatcagaggaagaacgt 203 |||||||||||||||||||| Sbjct: 40401 ggtgatcagaggaagaacgt 40382
>ref|XM_967678.1| PREDICTED: Tribolium castaneum similar to Protein translation factor SUI1 homolog (LOC661525), mRNA Length = 821 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 142 atccagcagcgtaatggtcgcaagagcctgaccactgtcca 182 |||||||| || ||||||||||||| || ||||||||||| Sbjct: 200 atccagcaacgaaatggtcgcaagactctaaccactgtcca 240
>emb|AL035065.1|SPBC23G7 S.pombe chromosome II cosmid c23G7 Length = 35694 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 245 acatcaagattcatggtttct 265 ||||||||||||||||||||| Sbjct: 11932 acatcaagattcatggtttct 11952
>ref|NM_001021768.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC23G7.05), partial mRNA Length = 330 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 245 acatcaagattcatggtttct 265 ||||||||||||||||||||| Sbjct: 308 acatcaagattcatggtttct 328
>gb|AF091857.1|AF091857 Pimpinella brachycarpa protein translation factor SUI1 homolog mRNA, complete cds Length = 533 Score = 42.1 bits (21), Expect = 1.8 Identities = 54/65 (83%) Strand = Plus / Plus Query: 187 gatcagaggaagaacgtctcaaacttccttgtccaggcgggcattgtgaagaaggaacac 246 |||||| | ||||||||||| | ||| |||||||||| || ||||| |||||||| || Sbjct: 309 gatcagcgcaagaacgtctccactttcattgtccaggctgggattgtcaagaaggatcag 368 Query: 247 atcaa 251 ||||| Sbjct: 369 atcaa 373
>dbj|AB001574.1| Schizosaccharomyces pombe DNA for SUI1 homologue, complete cds Length = 1904 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 245 acatcaagattcatggtttct 265 ||||||||||||||||||||| Sbjct: 976 acatcaagattcatggtttct 996
>gb|AY441361.1| Armigeres subalbatus ASAP ID: 39747 translation initiation factor mRNA sequence Length = 747 Score = 40.1 bits (20), Expect = 7.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 142 atccagcagcgtaatggtcgcaagagcctgaccactgtccaggg 185 ||||||||| | ||||||||||| | || |||||||||||||| Sbjct: 308 atccagcagagaaatggtcgcaaaacactaaccactgtccaggg 351
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 atcctcaaagacctcaagaa 52 |||||||||||||||||||| Sbjct: 659470 atcctcaaagacctcaagaa 659489
>gb|AC166256.5| Mus musculus BAC RP23-440F21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 181903 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 ctgaccactgtccagggtga 188 |||||||||||||||||||| Sbjct: 88233 ctgaccactgtccagggtga 88214
>emb|Z82081.1|CEW09H1 Caenorhabditis elegans Cosmid W09H1, complete sequence Length = 30827 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 tgccgaggcgaatgctgggg 97 |||||||||||||||||||| Sbjct: 6854 tgccgaggcgaatgctgggg 6873
>gb|AY232164.1| Drosophila yakuba clone yak-ad_CG17737 mRNA sequence Length = 330 Score = 40.1 bits (20), Expect = 7.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 142 atccagcagcgtaatggtcgcaagagcctgaccactgtccaggg 185 ||||||||| | || |||||||||| || |||||||||||||| Sbjct: 94 atccagcagaggaacggtcgcaagacgctaaccactgtccaggg 137
>ref|NM_001001889.1| Danio rerio catenin, beta 2 (ctnnb2), mRNA Length = 3550 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 90 tgctggggacgctggtgcagctgc 113 ||||||| |||||||||||||||| Sbjct: 1366 tgctgggcacgctggtgcagctgc 1389
>emb|AL357513.8| Human DNA sequence from clone RP11-100A16 on chromosome 6 Contains a cytochrome c oxidase subunit VIa polypeptide 1 (COX6A1) pseudogene, complete sequence Length = 177645 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 502 aataataatatatgctttct 521 |||||||||||||||||||| Sbjct: 38037 aataataatatatgctttct 38018
>emb|AL109920.15|HSDJ335E1 Human DNA sequence from clone RP3-335E1 on chromosome 6q16.2-21 Contains a CpG island, complete sequence Length = 143805 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 cacatcaagattcatggttt 263 |||||||||||||||||||| Sbjct: 62957 cacatcaagattcatggttt 62976
>emb|BX927149.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete genome; segment 2/10 Length = 349887 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 agaggaagaacgtctcaaac 210 |||||||||||||||||||| Sbjct: 123186 agaggaagaacgtctcaaac 123167
>gb|BC114257.1| Danio rerio cDNA clone IMAGE:7993163, partial cds Length = 2315 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 90 tgctggggacgctggtgcagctgc 113 ||||||| |||||||||||||||| Sbjct: 115 tgctgggcacgctggtgcagctgc 138
>gb|AF329680.1| Danio rerio beta-catenin 2 mRNA, complete cds Length = 3550 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 90 tgctggggacgctggtgcagctgc 113 ||||||| |||||||||||||||| Sbjct: 1366 tgctgggcacgctggtgcagctgc 1389
>gb|AC097725.2| Drosophila melanogaster 3L BAC RP98-48E19 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 176521 Score = 40.1 bits (20), Expect = 7.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 142 atccagcagcgtaatggtcgcaagagcctgaccactgtccaggg 185 ||||||||| | || |||||||||| || |||||||||||||| Sbjct: 166834 atccagcagaggaacggtcgcaagacgctaaccactgtccaggg 166877
>ref|NM_139535.2| Drosophila melanogaster CG17737-RA (CG17737), mRNA Length = 726 Score = 40.1 bits (20), Expect = 7.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 142 atccagcagcgtaatggtcgcaagagcctgaccactgtccaggg 185 ||||||||| | || |||||||||| || |||||||||||||| Sbjct: 243 atccagcagaggaacggtcgcaagacgctaaccactgtccaggg 286
>gb|AY095068.1| Drosophila melanogaster RE14985 full insert cDNA Length = 688 Score = 40.1 bits (20), Expect = 7.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 142 atccagcagcgtaatggtcgcaagagcctgaccactgtccaggg 185 ||||||||| | || |||||||||| || |||||||||||||| Sbjct: 243 atccagcagaggaacggtcgcaagacgctaaccactgtccaggg 286
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 ccagggtgatcagaggaaga 199 |||||||||||||||||||| Sbjct: 3620686 ccagggtgatcagaggaaga 3620667
>ref|NM_001027231.1| Caenorhabditis elegans W09H1.1a (W09H1.1) mRNA, complete cds Length = 1222 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 tgccgaggcgaatgctgggg 97 |||||||||||||||||||| Sbjct: 1009 tgccgaggcgaatgctgggg 990
>ref|NM_001027232.1| Caenorhabditis elegans W09H1.1b (W09H1.1) mRNA, complete cds Length = 1279 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 tgccgaggcgaatgctgggg 97 |||||||||||||||||||| Sbjct: 975 tgccgaggcgaatgctgggg 956
>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome Length = 3309401 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 agaggaagaacgtctcaaac 210 |||||||||||||||||||| Sbjct: 471208 agaggaagaacgtctcaaac 471189
>gb|AE003477.3| Drosophila melanogaster chromosome 3L, section 11 of 83 of the complete sequence Length = 297894 Score = 40.1 bits (20), Expect = 7.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 142 atccagcagcgtaatggtcgcaagagcctgaccactgtccaggg 185 ||||||||| | || |||||||||| || |||||||||||||| Sbjct: 152956 atccagcagaggaacggtcgcaagacgctaaccactgtccaggg 152999
>gb|AE000512.1| Thermotoga maritima MSB8, complete genome Length = 1860725 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 cctcaagaaagagttttgct 63 |||||||||||||||||||| Sbjct: 430737 cctcaagaaagagttttgct 430718
>gb|AC116952.4| Mus musculus BAC clone RP23-104A7 from 14, complete sequence Length = 210088 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 tgctgcctttgacccctttg 79 |||||||||||||||||||| Sbjct: 89618 tgctgcctttgacccctttg 89599 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,541,213 Number of Sequences: 3902068 Number of extensions: 4541213 Number of successful extensions: 83245 Number of sequences better than 10.0: 84 Number of HSP's better than 10.0 without gapping: 84 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 82955 Number of HSP's gapped (non-prelim): 279 length of query: 532 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 509 effective length of database: 17,143,297,704 effective search space: 8725938531336 effective search space used: 8725938531336 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
