ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd26i18 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF147501.1|AF147501 Hordeum vulgare 26S ribosomal RNA and 18S ribosomal RNA genes, partial sequence; and intergenic region Length = 2609 Score = 1219 bits (615), Expect = 0.0 Identities = 636/643 (98%), Gaps = 1/643 (0%) Strand = Plus / Plus Query: 2 ctctctggacgcctccttcgagtaaacctcccgtgcattgcacgggcggatgctcggttg 61 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1871 ctctctggacgcctccttcgagtaatcctcccgtgcattgcacgggcggatgctcggttg 1930 Query: 62 gcttgaccgatgtaggctactaaacgcatgagcagctttggacccgtgtctgctggtaga 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1931 gcttgaccgatgtaggctactaaacgcatgagcagctttggacccgtgtctgctggtaga 1990 Query: 122 tcccccgtcgttcgacggccgactattggcgccgtgtcctaccaatcagttggctttgta 181 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1991 tcccccgtcgttcgacggccgactattggcgccgtgtcctaccaatcagt-ggctttgta 2049 Query: 182 ccatcgatggatcaggaagtgcttgcatatgagtacccgacatacgggaagtggcgcgtg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2050 ccatcgatggatcaggaagtgcttgcatatgagtacccgacatacgggaagtggcgcgtg 2109 Query: 242 aaatatatgttgccacacggcggacgtcgtacgggcgttttgctgtggctggattgcgct 301 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2110 aaatatatgttgacacacggcggacgtcgtacgggcgttttgctgtggctggattgcgct 2169 Query: 302 tgtggcgttgcctcgtatcacgggcatgtaatgtgcctgttgttatcaaggcaacctcgc 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2170 tgtggcgttgcctcgtatcacgggcatgtaatgtgcctgttgttatcaaggcaacctcgc 2229 Query: 362 tcgcgtcgttggtctcggatgttgctcacgataaaggctcatggcccttttggttgcctc 421 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 2230 tcgcgtcgttggtctcggatgttgctcacgataaaggctcatggcccatttggttgcctc 2289 Query: 422 gacccgacccaagctcttcgtgctgagaacaaccggaactagggttgcctctacctctcc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2290 gacccgacccaagctcttcgtgctgagaacaaccggaactagggttgcctctacctctcc 2349 Query: 482 acagttacgtggtaggatacgcaactctctgtgccgatcctcacgaacgatgagctatgc 541 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 2350 rcagttacgtggtaggatacgcaactctctgtgccgatcctcatgaacgatgagctatgc 2409 Query: 542 ccgctggaaatcgacaaccggcttggctgttgcctctgcgtctctatgcaagtggaaccg 601 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 2410 ccgctggaaatcgacaaccggcttggctgttgcctctgcgtstctatgcaagtggaaccg 2469 Query: 602 gaggacgacaaccaatgctggacgtcatcgaggacgtgctacc 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2470 gaggacgacaaccaatgctggacgtcatcgaggacgtgctacc 2512
>emb|AJ315040.1|TMI315040 Triticum militinae IGS (partial), ETS and 18S rRNA gene (partial), isolate 1170001 Length = 1640 Score = 274 bits (138), Expect = 3e-70 Identities = 272/314 (86%), Gaps = 2/314 (0%) Strand = Plus / Plus Query: 297 gcgcttgtggcgttgcctcgtatcacgggcatgtaatgtgcctgttgttatcaaggcaac 356 ||||||| ||||||||||||| | | |||| | | ||||| |||| |||||||||||| Sbjct: 1000 gcgcttgcggcgttgcctcgtggcgctggcacattacgtgcccgttgctatcaaggcaac 1059 Query: 357 ctcgctcgcgtcgttggtctcggatgttgctcacgataaaggctcatggcccttttggtt 416 ||||||| || ||||||||||||| ||||||| ||||||| || ||||||||| |||| Sbjct: 1060 ctcgctcccgcttttggtctcggatgctgctcacaataaagggtcgtggccctttcggtt 1119 Query: 417 gcctcgacccgacccaa-gctcttcgtgctgagaacaaccggaactagggttgcctctac 475 ||||||||||||||||| ||||| || ||||||||||||||||| || ||||||||||| Sbjct: 1120 gcctcgacccgacccaaagctctccgaactgagaacaaccggaacaagagttgcctctac 1179 Query: 476 ctctccacagttacgtggtaggatacgcaactctctgtgccgatcctcacgaacgatgag 535 ||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||| Sbjct: 1180 ctctccacagttacgtggtaggatacgcaactctctgcgccgatcctcaaggacgatgag 1239 Query: 536 ctatgcccgctggaaatcgacaaccggcttggctgttgcctctgcgtctctatgcaagtg 595 || || ||||| | | |||||||||||| |||||||||||||| || || ||| ||||| Sbjct: 1240 ctgtg-ccgctcaagagcgacaaccggctcggctgttgcctctgagtttccatgaaagtg 1298 Query: 596 gaaccggaggacga 609 ||| || ||||||| Sbjct: 1299 gaagcgcaggacga 1312 Score = 123 bits (62), Expect = 8e-25 Identities = 117/134 (87%), Gaps = 1/134 (0%) Strand = Plus / Plus Query: 28 cctcccgtgcattgcacgggcggatgctcggttggcttgaccgat-gtaggctactaaac 86 |||||||||| |||||||||||| ||| |||||| ||||||| | || ||||||||| | Sbjct: 734 cctcccgtgctctgcacgggcggaggcttggttggtttgaccgcttgttggctactaagc 793 Query: 87 gcatgagcagctttggacccgtgtctgctggtagatcccccgtcgttcgacggccgacta 146 ||||||| |||||||||||||||||||| |||||||||||||| || | |||||||||| Sbjct: 794 gcatgagtagctttggacccgtgtctgccggtagatcccccgttgtactgcggccgacta 853 Query: 147 ttggcgccgtgtcc 160 |||||||||||| Sbjct: 854 ccggcgccgtgtcc 867
>emb|AJ315037.1|EIN315037 Elymus hispidus subsp. hispidus IGS (partial), ETS and 18S rRNA gene (partial), isolate 255150 NSGC Length = 1645 Score = 274 bits (138), Expect = 3e-70 Identities = 300/350 (85%), Gaps = 3/350 (0%) Strand = Plus / Plus Query: 297 gcgcttgtggcgttgcctcgtatcacgggcatgtaatgtgcctgttgttatcaaggcaac 356 ||||||| ||||||||||||| | | |||| |||| ||||||| || |||||||||||| Sbjct: 1003 gcgcttgcggcgttgcctcgtggcgctggcacgtaacgtgcctgctgctatcaaggcaac 1062 Query: 357 ctcgctcgcgtcgttggtctcggatgttgctcacgataaaggctcatggcccttttggtt 416 ||||||| || |||||||||||||| ||||||||||||||| || ||||||||| |||| Sbjct: 1063 ctcgctcccgctgttggtctcggatgctgctcacgataaagggtcgtggccctttcggtt 1122 Query: 417 gcctcgacccgacccaa-gctcttcgtgctgagaacaaccggaactagggttgcctctac 475 ||||||||||||||||| ||||| || ||||||||||||||||| | ||||||||||| Sbjct: 1123 gcctcgacccgacccaaagctctccgaactgagaacaaccggaacaggagttgcctctac 1182 Query: 476 ctctccacagttacgtggtaggatacgcaactctctgtgccgatcctcacgaacgatgag 535 |||||||||||||||||||||||||||| |||||||| ||||||||||| | | || ||| Sbjct: 1183 ctctccacagttacgtggtaggatacgcgactctctgcgccgatcctcaaggaggacgag 1242 Query: 536 ctatgcccgctggaaatcgacaaccgg-cttggctgttgcctctgcgtctctatgcaagt 594 ||||||| ||| | | |||||||||| | |||||||||||||| || || | ||||| Sbjct: 1243 ctatgcc-gctcaacagcgacaaccgggcccggctgttgcctctgagtttccacacaagt 1301 Query: 595 ggaaccggaggacgacaaccaatgctggacgtcatcgaggacgtgctacc 644 |||| || |||||||| || | ||||| ||||| ||||||||||||||| Sbjct: 1302 ggaagcgcaggacgacggccgacgctgggcgtcaccgaggacgtgctacc 1351 Score = 159 bits (80), Expect = 1e-35 Identities = 138/156 (88%), Gaps = 1/156 (0%) Strand = Plus / Plus Query: 6 ctggacgcctccttcgagtaaacctcccgtgcattgcacgggcggatgctcggttggctt 65 ||||||||||||||||||| | |||||||||| |||||||||||| ||| ||||||||| Sbjct: 715 ctggacgcctccttcgagtgatcctcccgtgctctgcacgggcggaggcttggttggctt 774 Query: 66 gaccgat-gtaggctactaaacgcatgagcagctttggacccgtgtctgctggtagatcc 124 ||||| | || ||||||||| |||||||| |||||||||||||||||||| ||||||||| Sbjct: 775 gaccgcttgttggctactaagcgcatgagtagctttggacccgtgtctgccggtagatcc 834 Query: 125 cccgtcgttcgacggccgactattggcgccgtgtcc 160 ||||| || | |||||||||| |||||||||||| Sbjct: 835 cccgttgtactgcggccgactaccggcgccgtgtcc 870
>emb|AJ315044.1|ALO315044 Aegilops longissima IGS (partial), ETS and 18S rRNA gene (partial), isolate HAE 121/82 IPK Length = 1644 Score = 266 bits (134), Expect = 8e-68 Identities = 271/314 (86%), Gaps = 2/314 (0%) Strand = Plus / Plus Query: 297 gcgcttgtggcgttgcctcgtatcacgggcatgtaatgtgcctgttgttatcaaggcaac 356 ||||||| ||||||||||||| | | ||||||| | |||||||||| |||||||||||| Sbjct: 1004 gcgcttgcggcgttgcctcgtggcgctggcatgttacgtgcctgttgctatcaaggcaac 1063 Query: 357 ctcgctcgcgtcgttggtctcggatgttgctcacgataaaggctcatggcccttttggtt 416 ||||||| || ||||||||||||| |||| |||||||||| || |||||||||||||| Sbjct: 1064 ctcgctctcgcttttggtctcggatgctgctgacgataaagggtcgtggcccttttggtt 1123 Query: 417 gcctcgacccgacccaa-gctcttcgtgctgagaacaaccggaactagggttgcctctac 475 ||||||||||||||||| ||||| || |||||||||||||||| | ||||||||||| Sbjct: 1124 gcctcgacccgacccaacgctctccgaattgagaacaaccggaacaggagttgcctctac 1183 Query: 476 ctctccacagttacgtggtaggatacgcaactctctgtgccgatcctcacgaacgatgag 535 |||||||||||||||||||||||||||| |||||||| ||||||||||| | | |||||| Sbjct: 1184 ctctccacagttacgtggtaggatacgcgactctctgcgccgatcctcaaggaggatgag 1243 Query: 536 ctatgcccgctggaaatcgacaaccggcttggctgttgcctctgcgtctctatgcaagtg 595 ||||| ||||| | | ||||||||||| |||||||||||||| || || | | ||||| Sbjct: 1244 ctatg-ccgctcaagagcgacaaccggcccggctgttgcctctgagtttccacgaaagtg 1302 Query: 596 gaaccggaggacga 609 ||| || ||||||| Sbjct: 1303 gaagcgcaggacga 1316 Score = 115 bits (58), Expect = 2e-22 Identities = 116/134 (86%), Gaps = 1/134 (0%) Strand = Plus / Plus Query: 28 cctcccgtgcattgcacgggcggatgctcggttggcttgaccgat-gtaggctactaaac 86 |||||||||| |||||||||| | ||| |||||| ||||||| | || ||||||||| | Sbjct: 738 cctcccgtgctctgcacgggcgaaggcttggttggtttgaccgcttgttggctactaagc 797 Query: 87 gcatgagcagctttggacccgtgtctgctggtagatcccccgtcgttcgacggccgacta 146 ||||||| |||||||||||||||||||| |||||||||||||| || | |||||||||| Sbjct: 798 gcatgagtagctttggacccgtgtctgccggtagatcccccgttgtactgcggccgacta 857 Query: 147 ttggcgccgtgtcc 160 |||||||||||| Sbjct: 858 ccggcgccgtgtcc 871
>emb|AJ315045.1|ASH315045 Aegilops sharonensis IGS (partial), ETS and 18S rRNA gene (partial), isolate 2170001 IPSR Length = 1644 Score = 258 bits (130), Expect = 2e-65 Identities = 270/314 (85%), Gaps = 2/314 (0%) Strand = Plus / Plus Query: 297 gcgcttgtggcgttgcctcgtatcacgggcatgtaatgtgcctgttgttatcaaggcaac 356 ||||||| ||||||||||||| | | ||||||| | ||||||| || |||||||||||| Sbjct: 1004 gcgcttgcggcgttgcctcgtggcgctggcatgttacgtgcctgctgctatcaaggcaac 1063 Query: 357 ctcgctcgcgtcgttggtctcggatgttgctcacgataaaggctcatggcccttttggtt 416 ||||||| || ||||||||||||| |||| |||||||||| || |||||||||||||| Sbjct: 1064 ctcgctctcgcttttggtctcggatgctgctgacgataaagggtcgtggcccttttggtt 1123 Query: 417 gcctcgacccgacccaa-gctcttcgtgctgagaacaaccggaactagggttgcctctac 475 ||||||||||||||||| ||||| || |||||||||||||||| | ||||||||||| Sbjct: 1124 gcctcgacccgacccaacgctctccgaattgagaacaaccggaacatgagttgcctctac 1183 Query: 476 ctctccacagttacgtggtaggatacgcaactctctgtgccgatcctcacgaacgatgag 535 |||||||||||||||||||||||||||| |||||||| ||||||||||| | | |||||| Sbjct: 1184 ctctccacagttacgtggtaggatacgcgactctctgcgccgatcctcaaggaggatgag 1243 Query: 536 ctatgcccgctggaaatcgacaaccggcttggctgttgcctctgcgtctctatgcaagtg 595 ||||| ||||| | | ||||||||||| |||||||||||||| || || | | ||||| Sbjct: 1244 ctatg-ccgctcaagagcgacaaccggcccggctgttgcctctgagtttccacgaaagtg 1302 Query: 596 gaaccggaggacga 609 ||| || ||||||| Sbjct: 1303 gaagcgcaggacga 1316 Score = 105 bits (53), Expect = 2e-19 Identities = 114/133 (85%), Gaps = 1/133 (0%) Strand = Plus / Plus Query: 28 cctcccgtgcattgcacgggcggatgctcggttggcttgaccgat-gtaggctactaaac 86 |||||||||| |||||||||||| ||| |||||| ||||||| | || || || ||| | Sbjct: 738 cctcccgtgctctgcacgggcggaggcttggttggtttgaccgcttgttggttattaagc 797 Query: 87 gcatgagcagctttggacccgtgtctgctggtagatcccccgtcgttcgacggccgacta 146 ||||||| |||||||||||||||||||| |||||||||||||| || | |||||||||| Sbjct: 798 gcatgagtagctttggacccgtgtctgccggtagatcccccgttgtactgcggccgacta 857 Query: 147 ttggcgccgtgtc 159 ||||||||||| Sbjct: 858 ccggcgccgtgtc 870
>gb|M37231.1|RYENORR1 Rye 26S rRNA 3' end and 18S rRNA, 5' end Length = 4507 Score = 256 bits (129), Expect = 8e-65 Identities = 260/301 (86%), Gaps = 2/301 (0%) Strand = Plus / Plus Query: 345 tatcaaggcaacctcgctcgcgtcgttggtctcggatgttgctcacgataaaggctcatg 404 ||||||||||||||||||| || |||||| ||||||| |||||||||||||| || || Sbjct: 3950 tatcaaggcaacctcgctcccgctgttggtatcggatgctgctcacgataaagagtcgtg 4009 Query: 405 gcccttttggttgcctcgacccgacccaa-gctcttcgtgctgagaacaaccggaactag 463 |||||||||||||||||||||||||| || |||||||| ||||||||||||||||| || Sbjct: 4010 gcccttttggttgcctcgacccgaccaaaagctcttcgaactgagaacaaccggaacaag 4069 Query: 464 ggttgcctctacctctccacagttacgtggtaggatacgcaactctctgtgccgatcctc 523 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 4070 agttgcctctacctctccacagttacgtggtaggatacgcgactctctgtgccgatcctc 4129 Query: 524 acgaacgatgagctatgcccgctggaaatcgacaaccggcttggctgttgcctctgcgtc 583 | | ||||||||||||| ||||| ||| |||||||||| ||||||| ||| || || Sbjct: 4130 atggacgatgagctatg-ccgctcaaaagcgacaaccggtccggctgtttcctatgagtt 4188 Query: 584 tctatgcaagtggaaccggaggacgacaaccaatgctggacgtcatcgaggacgtgctac 643 || | |||||||||| | ||| ||| || | ||||| ||||| |||||||||||||| Sbjct: 4189 tccacgcaagtggaagagcagggagacggccgacgctgggcgtcaccgaggacgtgctac 4248 Query: 644 c 644 | Sbjct: 4249 c 4249 Score = 93.7 bits (47), Expect = 7e-16 Identities = 65/71 (91%) Strand = Plus / Plus Query: 76 ggctactaaacgcatgagcagctttggacccgtgtctgctggtagatcccccgtcgttcg 135 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||| || | Sbjct: 3688 ggctactaagcgcatgagcagctttggacccgtgtctgccggtagatcccccgttgtact 3747 Query: 136 acggccgacta 146 |||||||||| Sbjct: 3748 gcggccgacta 3758
>emb|AJ315033.1|SVA315033 Secale vavilovii IGS (partial), ETS and 18S rRNA gene (partial), isolate 253957 NSGC Length = 1635 Score = 254 bits (128), Expect = 3e-64 Identities = 268/312 (85%), Gaps = 2/312 (0%) Strand = Plus / Plus Query: 334 gtgcctgttgttatcaaggcaacctcgctcgcgtcgttggtctcggatgttgctcacgat 393 ||||||| || ||||||||||||||||||| || |||||| ||||||| |||||||||| Sbjct: 1031 gtgcctggtgctatcaaggcaacctcgctcccgctgttggtatcggatgctgctcacgat 1090 Query: 394 aaaggctcatggcccttttggttgcctcgacccgacccaa-gctcttcgtgctgagaaca 452 |||| || |||||||||||||||||||||||||||| || |||||||| ||||||||| Sbjct: 1091 aaagagtcgtggcccttttggttgcctcgacccgaccaaaagctcttcgaactgagaaca 1150 Query: 453 accggaactagggttgcctctacctctccacagttacgtggtaggatacgcaactctctg 512 |||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1151 accggaacaagagttgcctctacctctccacagttacgtggtaggatacgcgactctctg 1210 Query: 513 tgccgatcctcacgaacgatgagctatgcccgctggaaatcgacaaccggcttggctgtt 572 ||||||||||| | ||||||||||||| ||||| ||| |||||||||| ||||||| Sbjct: 1211 cgccgatcctcatggacgatgagctatg-ccgctcaaaagcgacaaccggtccggctgtt 1269 Query: 573 gcctctgcgtctctatgcaagtggaaccggaggacgacaaccaatgctggacgtcatcga 632 ||| || || || | |||||||||| | ||| ||| || | ||||| ||||| ||| Sbjct: 1270 tcctatgagtttccacgcaagtggaagagcagggagacggccgacgctgggcgtcaccga 1329 Query: 633 ggacgtgctacc 644 |||||||||||| Sbjct: 1330 ggacgtgctacc 1341 Score = 105 bits (53), Expect = 2e-19 Identities = 77/85 (90%) Strand = Plus / Plus Query: 76 ggctactaaacgcatgagcagctttggacccgtgtctgctggtagatcccccgtcgttcg 135 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||| || | Sbjct: 778 ggctactaagcgcatgagcagctttggacccgtgtctgccggtagatcccccgttgtact 837 Query: 136 acggccgactattggcgccgtgtcc 160 |||||||||| |||||||||||| Sbjct: 838 gcggccgactaccggcgccgtgtcc 862
>emb|AJ315035.1|SST315035 Secale strictum IGS (partial), ETS and 18S rRNA gene (partial), isolate 205222 NSGC Length = 1635 Score = 250 bits (126), Expect = 5e-63 Identities = 190/210 (90%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 334 gtgcctgttgttatcaaggcaacctcgctcgcgtcgttggtctcggatgttgctcacgat 393 ||||||| || ||||||||||||||||||| || |||||| ||||||| |||||||||| Sbjct: 1031 gtgcctggtgctatcaaggcaacctcgctcccgctgttggtatcggatgctgctcacgat 1090 Query: 394 aaaggctcatggcccttttggttgcctcgacccgacccaa-gctcttcgtgctgagaaca 452 |||| || |||||||||||||||||||||||||||| || |||||||| ||||||||| Sbjct: 1091 aaagagtcgtggcccttttggttgcctcgacccgaccaaaagctcttcgaactgagaaca 1150 Query: 453 accggaactagggttgcctctacctctccacagttacgtggtaggatacgcaactctctg 512 |||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1151 accggaacaagagttgcctctacctctccacagttacgtggtaggatacgcgactctctg 1210 Query: 513 tgccgatcctcacgaacgatgagctatgcc 542 ||||||||||| | ||||||||||||||| Sbjct: 1211 agccgatcctcatggacgatgagctatgcc 1240 Score = 113 bits (57), Expect = 7e-22 Identities = 115/133 (86%), Gaps = 1/133 (0%) Strand = Plus / Plus Query: 29 ctcccgtgcattgcacgggcggatgctcggttggcttgaccgat-gtaggctactaaacg 87 ||||||||| |||| ||||||| ||| ||||| ||||||| | || ||||||||| || Sbjct: 730 ctcccgtgctctgcatgggcggaggcttcgttggtttgaccgcttgttggctactaagcg 789 Query: 88 catgagcagctttggacccgtgtctgctggtagatcccccgtcgttcgacggccgactat 147 ||||||||||||||||||||||||||| |||||||||||||| || | |||||||||| Sbjct: 790 catgagcagctttggacccgtgtctgccggtagatcccccgttgtactgcggccgactac 849 Query: 148 tggcgccgtgtcc 160 |||||||||||| Sbjct: 850 cggcgccgtgtcc 862
>emb|AJ315039.1|ASP315039 Aegilops speltoides IGS (partial), ETS and 18S rRNA gene (partial), isolate AE 315/88 IPK Length = 1640 Score = 250 bits (126), Expect = 5e-63 Identities = 269/314 (85%), Gaps = 2/314 (0%) Strand = Plus / Plus Query: 297 gcgcttgtggcgttgcctcgtatcacgggcatgtaatgtgcctgttgttatcaaggcaac 356 ||||||| ||||||||||||| | | |||| | | ||||| |||| |||||||||||| Sbjct: 1000 gcgcttgcggcgttgcctcgtggcgctggcacattacgtgcccgttgctatcaaggcaac 1059 Query: 357 ctcgctcgcgtcgttggtctcggatgttgctcacgataaaggctcatggcccttttggtt 416 ||||||| || ||||||||||||| ||||||||||||||| || ||||||||| |||| Sbjct: 1060 ctcgctcccgcttttggtctcggatgctgctcacgataaagggtcgtggccctttcggtt 1119 Query: 417 gcctcgacccgacccaa-gctcttcgtgctgagaacaaccggaactagggttgcctctac 475 ||||||||||||||||| ||||| || ||||||||||||||||| | |||||||||| Sbjct: 1120 gcctcgacccgacccaaagctctccgaactgagaacaaccggaacaggacttgcctctac 1179 Query: 476 ctctccacagttacgtggtaggatacgcaactctctgtgccgatcctcacgaacgatgag 535 ||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||| Sbjct: 1180 ctctccacagttacgtggtaggatacgcaactctctgcgccgatcctcaaggacgatgag 1239 Query: 536 ctatgcccgctggaaatcgacaaccggcttggctgttgcctctgcgtctctatgcaagtg 595 || || ||||| | | ||||||||||| |||||||||||||| || || | | ||||| Sbjct: 1240 ctgtg-ccgctcaagagcgacaaccggcccggctgttgcctctgagtttccacgaaagtg 1298 Query: 596 gaaccggaggacga 609 ||| || ||||||| Sbjct: 1299 gaagcgcaggacga 1312 Score = 123 bits (62), Expect = 8e-25 Identities = 117/134 (87%), Gaps = 1/134 (0%) Strand = Plus / Plus Query: 28 cctcccgtgcattgcacgggcggatgctcggttggcttgaccgat-gtaggctactaaac 86 |||||||||| |||||||||||| ||| |||||| ||||||| | || ||||||||| | Sbjct: 734 cctcccgtgctctgcacgggcggaggcttggttggtttgaccgcttgttggctactaagc 793 Query: 87 gcatgagcagctttggacccgtgtctgctggtagatcccccgtcgttcgacggccgacta 146 ||||||| |||||||||||||||||||| |||||||||||||| || | |||||||||| Sbjct: 794 gcatgagtagctttggacccgtgtctgccggtagatcccccgttgtactgcggccgacta 853 Query: 147 ttggcgccgtgtcc 160 |||||||||||| Sbjct: 854 ccggcgccgtgtcc 867
>emb|AJ315038.1|AMU315038 Amblyopyrum muticum IGS (partial), ETS and 18S rRNA gene (partial), isolate 560121 NSGC Length = 1643 Score = 250 bits (126), Expect = 5e-63 Identities = 269/314 (85%), Gaps = 2/314 (0%) Strand = Plus / Plus Query: 297 gcgcttgtggcgttgcctcgtatcacgggcatgtaatgtgcctgttgttatcaaggcaac 356 ||||||| ||||||||||||| || |||| || | ||||| |||| |||||||||||| Sbjct: 1003 gcgcttgcggcgttgcctcgtggcattggcacgttacgtgcccgttgctatcaaggcaac 1062 Query: 357 ctcgctcgcgtcgttggtctcggatgttgctcacgataaaggctcatggcccttttggtt 416 ||||||| || ||||||||||||| ||||||||||||||| || ||||||||| |||| Sbjct: 1063 ctcgctcccgcttttggtctcggatgctgctcacgataaagggtcgtggccctttcggtt 1122 Query: 417 gcctcgacccgacccaa-gctcttcgtgctgagaacaaccggaactagggttgcctctac 475 ||||||||||||||||| ||||| || |||||||||||||||| | ||||||||||| Sbjct: 1123 gcctcgacccgacccaaagctctccgaattgagaacaaccggaacaggagttgcctctac 1182 Query: 476 ctctccacagttacgtggtaggatacgcaactctctgtgccgatcctcacgaacgatgag 535 |||||||||||||||||||||||||||| |||||||| ||||||||||| | | |||||| Sbjct: 1183 ctctccacagttacgtggtaggatacgcgactctctgcgccgatcctcaaggaggatgag 1242 Query: 536 ctatgcccgctggaaatcgacaaccggcttggctgttgcctctgcgtctctatgcaagtg 595 || || ||||| ||| ||||||||||| |||||||||||||| || || | | ||||| Sbjct: 1243 ctgtg-ccgctcaaaagcgacaaccggcgcggctgttgcctctgagtttccacgaaagtg 1301 Query: 596 gaaccggaggacga 609 ||| || ||||||| Sbjct: 1302 gaagcgcaggacga 1315 Score = 131 bits (66), Expect = 3e-27 Identities = 118/134 (88%), Gaps = 1/134 (0%) Strand = Plus / Plus Query: 28 cctcccgtgcattgcacgggcggatgctcggttggcttgaccgat-gtaggctactaaac 86 |||||||||| |||||||||||| ||| |||||||||||||| | || ||||||||| | Sbjct: 737 cctcccgtgctctgcacgggcggaggcttggttggcttgaccgcttgttggctactaagc 796 Query: 87 gcatgagcagctttggacccgtgtctgctggtagatcccccgtcgttcgacggccgacta 146 ||||||| |||||||||||||||||||| |||||||||||||| || | |||||||||| Sbjct: 797 gcatgagtagctttggacccgtgtctgccggtagatcccccgttgtactgcggccgacta 856 Query: 147 ttggcgccgtgtcc 160 |||||||||||| Sbjct: 857 ccggcgccgtgtcc 870
>emb|X07841.1|TARDNAI Wheat rDNA 25S-18S intergenic region EcoRI-BamHI fragment Length = 4642 Score = 244 bits (123), Expect = 3e-61 Identities = 218/247 (88%), Gaps = 2/247 (0%) Strand = Plus / Plus Query: 334 gtgcctgttgttatcaaggcaacctcgctcgcgtcgttggtctcggatgttgctcacgat 393 ||||| |||| ||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 3789 gtgcccgttgctatcaaggcaacctcgctcccgcttttggtctcggatgctgctcacgat 3848 Query: 394 aaaggctcatggcccttttggttgcctcgacccgacccaa-gctcttcgtgctgagaaca 452 ||||| || ||||||||| ||||||||||||||||||||| ||||| || ||||||||| Sbjct: 3849 aaagggtcgtggccctttcggttgcctcgacccgacccaaagctctccgaactgagaaca 3908 Query: 453 accggaactagggttgcctctacctctccacagttacgtggtaggatacgcaactctctg 512 |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3909 accggaacaggacttgcctctacctctccacagttacgtggtaggatacgcaactctctg 3968 Query: 513 tgccgatcctcacgaacgatgagctatgcccgctggaaatcgacaaccggcttggctgtt 572 ||||||||||| | |||||||||| || ||||| | | ||||||||||| ||||||| Sbjct: 3969 cgccgatcctcaaggacgatgagctgtg-ccgctcaagagcgacaaccggcccggctgtt 4027 Query: 573 gcctctg 579 ||||||| Sbjct: 4028 gcctctg 4034 Score = 115 bits (58), Expect = 2e-22 Identities = 116/134 (86%), Gaps = 1/134 (0%) Strand = Plus / Plus Query: 28 cctcccgtgcattgcacgggcggatgctcggttggcttgaccgat-gtaggctactaaac 86 |||||||||| |||| ||||||| ||| |||||| ||||||| | || ||||||||| | Sbjct: 3486 cctcccgtgctatgcatgggcggaggcttggttggtttgaccgcttgttggctactaagc 3545 Query: 87 gcatgagcagctttggacccgtgtctgctggtagatcccccgtcgttcgacggccgacta 146 ||||||| |||||||||||||||||||| |||||||||||||| || | |||||||||| Sbjct: 3546 gcatgagtagctttggacccgtgtctgccggtagatcccccgttgtactgcggccgacta 3605 Query: 147 ttggcgccgtgtcc 160 |||||||||||| Sbjct: 3606 ccggcgccgtgtcc 3619
>emb|AJ315047.1|ACO315047 Aegilops comosa IGS (partial), ETS and 18S rRNA gene (partial), isolate 2110001 IPSR Length = 1644 Score = 230 bits (116), Expect = 5e-57 Identities = 244/284 (85%), Gaps = 2/284 (0%) Strand = Plus / Plus Query: 297 gcgcttgtggcgttgcctcgtatcacgggcatgtaatgtgcctgttgttatcaaggcaac 356 ||||||| ||||||||||||| | | |||| || | ||||| | || |||||||||||| Sbjct: 1004 gcgcttgcggcgttgcctcgtggcgctggcacgttacgtgcccgctgctatcaaggcaac 1063 Query: 357 ctcgctcgcgtcgttggtctcggatgttgctcacgataaaggctcatggcccttttggtt 416 ||||||| || ||||||||||||| |||| |||||||||| || ||||||||| |||| Sbjct: 1064 ctcgctcccgcttttggtctcggatgctgcttacgataaagggtcgtggccctttcggtt 1123 Query: 417 gcctcgacccgacccaa-gctcttcgtgctgagaacaaccggaactagggttgcctctac 475 ||||||||||||||||| ||||| || |||||||||||||||| | ||||||||||| Sbjct: 1124 gcctcgacccgacccaaagctctccgaattgagaacaaccggaacaggagttgcctctac 1183 Query: 476 ctctccacagttacgtggtaggatacgcaactctctgtgccgatcctcacgaacgatgag 535 |||||||||||||||||||||||||||| |||||||| ||||||||||| | | |||||| Sbjct: 1184 ctctccacagttacgtggtaggatacgcgactctctgcgccgatcctcaaggaggatgag 1243 Query: 536 ctatgcccgctggaaatcgacaaccggcttggctgttgcctctg 579 ||||| ||||| | | ||||||||||| |||||||||||||| Sbjct: 1244 ctatg-ccgctcaagagcgacaaccggcccggctgttgcctctg 1286 Score = 123 bits (62), Expect = 8e-25 Identities = 117/134 (87%), Gaps = 1/134 (0%) Strand = Plus / Plus Query: 28 cctcccgtgcattgcacgggcggatgctcggttggcttgaccgat-gtaggctactaaac 86 |||||||||| |||||||||||| ||| |||||| ||||||| | || ||||||||| | Sbjct: 738 cctcccgtgctctgcacgggcggaggcttggttggtttgaccgcttgttggctactaagc 797 Query: 87 gcatgagcagctttggacccgtgtctgctggtagatcccccgtcgttcgacggccgacta 146 ||||||| |||||||||||||||||||| |||||||||||||| || | |||||||||| Sbjct: 798 gcatgagtagctttggacccgtgtctgccggtagatcccccgttgtactgcggccgacta 857 Query: 147 ttggcgccgtgtcc 160 |||||||||||| Sbjct: 858 ccggcgccgtgtcc 871 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 199 agtgcttgcatatgagtacccgacatacgggaagtgg 235 ||||||||||| |||||||||| |||||||||||| Sbjct: 906 agtgcttgcatgctagtacccgacctacgggaagtgg 942
>emb|AJ315042.1|ASE315042 Aegilops searsii IGS (partial), ETS and 18S rRNA gene (partial), isolate AE 597/85 IPK Length = 1643 Score = 226 bits (114), Expect = 7e-56 Identities = 266/314 (84%), Gaps = 2/314 (0%) Strand = Plus / Plus Query: 297 gcgcttgtggcgttgcctcgtatcacgggcatgtaatgtgcctgttgttatcaaggcaac 356 ||||||| ||||||||||||| | | |||| || | ||||| | || |||||||||||| Sbjct: 1003 gcgcttgcggcgttgcctcgtggcgctggcacgttacgtgcccgctgctatcaaggcaac 1062 Query: 357 ctcgctcgcgtcgttggtctcggatgttgctcacgataaaggctcatggcccttttggtt 416 ||||||| || ||||||||||||| |||| |||||||||| || ||||||||| |||| Sbjct: 1063 ctcgctctcgcttttggtctcggatgctgctgacgataaagggtcgtggccctttcggtt 1122 Query: 417 gcctcgacccgacccaa-gctcttcgtgctgagaacaaccggaactagggttgcctctac 475 ||||||||||||||||| ||||| || |||||||||||||||| | ||||||||| | Sbjct: 1123 gcctcgacccgacccaaagctctccgaattgagaacaaccggaacaggagttgcctctgc 1182 Query: 476 ctctccacagttacgtggtaggatacgcaactctctgtgccgatcctcacgaacgatgag 535 |||||||||||||||||||||||||||| |||||||| ||||||||||| | | |||||| Sbjct: 1183 ctctccacagttacgtggtaggatacgcgactctctgcgccgatcctcaaggaggatgag 1242 Query: 536 ctatgcccgctggaaatcgacaaccggcttggctgttgcctctgcgtctctatgcaagtg 595 ||||| ||||| | | ||||||||||| |||||||||||||| || || | | ||||| Sbjct: 1243 ctatg-ccgctcaagagcgacaaccggcccggctgttgcctctgagtttccacgaaagtg 1301 Query: 596 gaaccggaggacga 609 ||| || ||||||| Sbjct: 1302 gaagcgcaggacga 1315 Score = 115 bits (58), Expect = 2e-22 Identities = 117/134 (87%), Gaps = 2/134 (1%) Strand = Plus / Plus Query: 28 cctcccgtgcattgcacgggcggatgctcggttggcttgaccgat-gtaggctactaaac 86 |||||||||| |||||||||||| ||| |||||| ||||||| | || ||||||||| | Sbjct: 738 cctcccgtgctctgcacgggcgga-gcttggttggtttgaccgcttgttggctactaagc 796 Query: 87 gcatgagcagctttggacccgtgtctgctggtagatcccccgtcgttcgacggccgacta 146 ||||||| |||||||||||||||||||| |||||||||||||| || | |||||||||| Sbjct: 797 gcatgagtagctttggacccgtgtctgccggtagatcccccgttgtactgcggccgacta 856 Query: 147 ttggcgccgtgtcc 160 |||||||||||| Sbjct: 857 ccggcgccgtgtcc 870
>gb|AF147500.1|AF147500 Triticum spelta 26S ribosomal RNA and 18S ribosomal RNA genes, partial sequence; and intergenic region Length = 2987 Score = 220 bits (111), Expect = 4e-54 Identities = 215/247 (87%), Gaps = 2/247 (0%) Strand = Plus / Plus Query: 334 gtgcctgttgttatcaaggcaacctcgctcgcgtcgttggtctcggatgttgctcacgat 393 ||||| |||| ||||||||||||||||||| || ||||||||||||| |||| ||||| Sbjct: 2619 gtgcccgttgctatcaaggcaacctcgctcccgcttttggtctcggatgctgctgacgat 2678 Query: 394 aaaggctcatggcccttttggttgcctcgacccgacccaa-gctcttcgtgctgagaaca 452 ||||| || ||||||||| ||||||||||||||||||||| ||||| | ||||||||| Sbjct: 2679 aaagggtcgtggccctttcggttgcctcgacccgacccaaagctctcggaactgagaaca 2738 Query: 453 accggaactagggttgcctctacctctccacagttacgtggtaggatacgcaactctctg 512 |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2739 accggaacaggagttgcctctacctctccacagttacgtggtaggatacgcaactctctg 2798 Query: 513 tgccgatcctcacgaacgatgagctatgcccgctggaaatcgacaaccggcttggctgtt 572 ||||||||||| | | |||||||| || ||||| | | |||| |||||| ||||||| Sbjct: 2799 cgccgatcctcaaggatgatgagctgtg-ccgctcaagagcgacgaccggcccggctgtt 2857 Query: 573 gcctctg 579 ||||||| Sbjct: 2858 gcctctg 2864 Score = 87.7 bits (44), Expect = 4e-14 Identities = 105/122 (86%), Gaps = 3/122 (2%) Strand = Plus / Plus Query: 40 tgcacgggcggatgctcggttggcttgaccgatg-taggctactaaacgcatgagcagct 98 |||||||||| | ||| |||||| ||||||| || | ||||||||| |||||||| |||| Sbjct: 2330 tgcacgggcgraggcttggttggtttgaccgctggttggctactaagcgcatgagtagct 2389 Query: 99 ttggacccgtgtctgctggtagatcccccgtcgttcgacggccgactattggcgccgtgt 158 |||||||||||||||| ||||||| |||||| || | |||||||||| |||||||||| Sbjct: 2390 ttggacccgtgtctgc-ggtagat-ccccgttgtactgcggccgactaccggcgccgtgt 2447 Query: 159 cc 160 || Sbjct: 2448 cc 2449
>emb|AJ315048.1|AUM315048 Aegilops umbellulata IGS (partial), ETS and 18S rRNA gene (partial), isolate 116294 NSGC Length = 1644 Score = 220 bits (111), Expect = 4e-54 Identities = 251/295 (85%), Gaps = 2/295 (0%) Strand = Plus / Plus Query: 305 ggcgttgcctcgtatcacgggcatgtaatgtgcctgttgttatcaaggcaacctcgctcg 364 ||||||||||||| | | ||||||| | ||||| | || ||||||||||||||||||| Sbjct: 1012 ggcgttgcctcgtggcgctggcatgttacgtgcccgctgctatcaaggcaacctcgctcc 1071 Query: 365 cgtcgttggtctcggatgttgctcacgataaaggctcatggcccttttggttgcctcgac 424 || ||||||||||||| |||| |||||||||| || ||||||||| |||||||||||| Sbjct: 1072 cgcttttggtctcggatgctgctgacgataaagggtcgtggccctttcggttgcctcgac 1131 Query: 425 ccgacccaa-gctcttcgtgctgagaacaaccggaactagggttgcctctacctctccac 483 ||||||||| ||||| || |||||||||||||||| | ||||||||||||||||||| Sbjct: 1132 ccgacccaaagctctccgaattgagaacaaccggaacaggagttgcctctacctctccac 1191 Query: 484 agttacgtggtaggatacgcaactctctgtgccgatcctcacgaacgatgagctatgccc 543 |||||||||||||||||||| ||||| || ||||||||||| | | ||||||||||| || Sbjct: 1192 agttacgtggtaggatacgcgactctttgcgccgatcctcaaggaggatgagctatg-cc 1250 Query: 544 gctggaaatcgacaaccggcttggctgttgcctctgcgtctctatgcaagtggaa 598 ||| | | ||||||||||| ||||||||||| || || || ||| |||||||| Sbjct: 1251 gctcaagagcgacaaccggcccggctgttgcctttgagtttccatgaaagtggaa 1305 Score = 123 bits (62), Expect = 8e-25 Identities = 117/134 (87%), Gaps = 1/134 (0%) Strand = Plus / Plus Query: 28 cctcccgtgcattgcacgggcggatgctcggttggcttgaccgat-gtaggctactaaac 86 |||||||||| |||||||||||| ||| |||||| ||||||| | || ||||||||| | Sbjct: 738 cctcccgtgctctgcacgggcggaggcttggttggtttgaccgcttgttggctactaagc 797 Query: 87 gcatgagcagctttggacccgtgtctgctggtagatcccccgtcgttcgacggccgacta 146 ||||||| |||||||||||||||||||| |||||||||||||| || | |||||||||| Sbjct: 798 gcatgagtagctttggacccgtgtctgccggtagatcccccgttgtactgcggccgacta 857 Query: 147 ttggcgccgtgtcc 160 |||||||||||| Sbjct: 858 ccggcgccgtgtcc 871
>emb|AJ315046.1|ACA315046 Aegilops markgrafii IGS (partial), ETS and 18S rRNA gene (partial), isolate 46823 ICARDA Length = 1642 Score = 210 bits (106), Expect = 4e-51 Identities = 264/314 (84%), Gaps = 2/314 (0%) Strand = Plus / Plus Query: 297 gcgcttgtggcgttgcctcgtatcacgggcatgtaatgtgcctgttgttatcaaggcaac 356 ||||||| ||||||||||||| | | |||| || | ||||| | || |||||||||||| Sbjct: 1002 gcgcttgcggcgttgcctcgtggcgctggcacgttacgtgcccgctgctatcaaggcaac 1061 Query: 357 ctcgctcgcgtcgttggtctcggatgttgctcacgataaaggctcatggcccttttggtt 416 ||||||| || ||||||||||||| |||| |||||||||| || ||||||||| |||| Sbjct: 1062 ctcgctcccgcttttggtctcggatgctgctgacgataaagggtcgtggccctttcggtt 1121 Query: 417 gcctcgacccgaccc-aagctcttcgtgctgagaacaaccggaactagggttgcctctac 475 ||||||||||||||| ||||||| || |||||||||||||||| | ||||| | | Sbjct: 1122 gcctcgacccgacccaaagctctccgaattgagaacaaccggaacaggagttgctcttcc 1181 Query: 476 ctctccacagttacgtggtaggatacgcaactctctgtgccgatcctcacgaacgatgag 535 |||||||||||||||||||||||||||| |||||||| ||||||||||| | | |||||| Sbjct: 1182 ctctccacagttacgtggtaggatacgcgactctctgcgccgatcctcaaggaggatgag 1241 Query: 536 ctatgcccgctggaaatcgacaaccggcttggctgttgcctctgcgtctctatgcaagtg 595 ||||| ||||| | | |||||||||||| |||||||||||||| || || | | ||||| Sbjct: 1242 ctatg-ccgctcaagagcgacaaccggctcggctgttgcctctgagtttccacgaaagtg 1300 Query: 596 gaaccggaggacga 609 ||| || ||||||| Sbjct: 1301 gaagcgcaggacga 1314 Score = 93.7 bits (47), Expect = 7e-16 Identities = 114/134 (85%), Gaps = 3/134 (2%) Strand = Plus / Plus Query: 28 cctcccgtgcattgcacgggcggatgctcggttggcttgaccgat-gtaggctactaaac 86 |||||||||| |||||||||||| || |||||| ||||||| | || || || ||| | Sbjct: 738 cctcccgtgctctgcacgggcgga--cttggttggtttgaccgcttgttggttattaagc 795 Query: 87 gcatgagcagctttggacccgtgtctgctggtagatcccccgtcgttcgacggccgacta 146 ||||||| |||||||||||||||||||| |||||||||||||| || | |||||||||| Sbjct: 796 gcatgagtagctttggacccgtgtctgccggtagatcccccgttgtactgcggccgacta 855 Query: 147 ttggcgccgtgtcc 160 |||||||||||| Sbjct: 856 ccggcgccgtgtcc 869
>emb|AJ315036.1|TTH315036 Triticum thaoudar IGS (partial), ETS and 18S rRNA gene (partial), isolate 1020010 IPSR Length = 1636 Score = 204 bits (103), Expect = 3e-49 Identities = 191/219 (87%), Gaps = 1/219 (0%) Strand = Plus / Plus Query: 324 ggcatgtaatgtgcctgttgttatcaaggcaacctcgctcgcgtcgttggtctcggatgt 383 ||||||| ||||||| | | ||||||||||| |||||||| | ||||||| |||||| Sbjct: 1022 ggcatgttatgtgcccggtcctatcaaggcaatctcgctcgtgctattggtcttggatgt 1081 Query: 384 tgctcacgataaaggctcatggcccttttggttgcctcgacccgacccaa-gctcttcgt 442 |||||| |||||||| || ||||||||| |||||||||||||||||| || |||||| | Sbjct: 1082 tgctcatgataaagggtcgtggccctttcggttgcctcgacccgacctaacgctctttga 1141 Query: 443 gctgagaacaaccggaactagggttgcctctacctctccacagttacgtggtaggatacg 502 || ||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 1142 attgggaacaaccggaacaagagttgcctctacctctccacagttacgtggtaggatacg 1201 Query: 503 caactctctgtgccgatcctcacgaacgatgagctatgc 541 | |||||||| ||||||||||| | |||||||||||||| Sbjct: 1202 cgactctctgcgccgatcctcaaggacgatgagctatgc 1240 Score = 123 bits (62), Expect = 8e-25 Identities = 117/134 (87%), Gaps = 1/134 (0%) Strand = Plus / Plus Query: 28 cctcccgtgcattgcacgggcggatgctcggttggcttgaccgat-gtaggctactaaac 86 ||||| |||| ||||||||| ||| ||| |||||| ||||||| | || ||||||||| | Sbjct: 729 cctcctgtgctttgcacgggaggaggcttggttggtttgaccgcttgttggctactaagc 788 Query: 87 gcatgagcagctttggacccgtgtctgctggtagatcccccgtcgttcgacggccgacta 146 |||||||||||||||||||||||||||| |||||||||||||| || | |||||||||| Sbjct: 789 gcatgagcagctttggacccgtgtctgccggtagatcccccgttgtactgcggccgacta 848 Query: 147 ttggcgccgtgtcc 160 |||||||||||| Sbjct: 849 ccggcgccgtgtcc 862
>emb|AJ315034.1|SMO315034 Secale montanum IGS (partial), ETS and 18S rRNA gene (partial), isolate 3100001 IPSR Length = 1637 Score = 202 bits (102), Expect = 1e-48 Identities = 184/210 (87%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 334 gtgcctgttgttatcaaggcaacctcgctcgcgtcgttggtctcggatgttgctcacgat 393 ||||||| || ||||||||||||||||||| || |||||| ||||||| |||||| ||| Sbjct: 1033 gtgcctggtgctatcaaggcaacctcgctcccgctgttggtatcggatgctgctcatgat 1092 Query: 394 aaaggctcatggcccttttggttgcctcgacccgacccaa-gctcttcgtgctgagaaca 452 |||| || ||||||||||||||||||||||||| || || |||||||| ||||| || Sbjct: 1093 aaagagtcgtggcccttttggttgcctcgacccgcccaaaagctcttcgacttgagacca 1152 Query: 453 accggaactagggttgcctctacctctccacagttacgtggtaggatacgcaactctctg 512 ||||| | || ||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1153 cccggaccaagagttgcctctacctctccacagttacgtggtaggatacgcgactctctg 1212 Query: 513 tgccgatcctcacgaacgatgagctatgcc 542 ||||||||||| | ||||||||||||||| Sbjct: 1213 cgccgatcctcatggacgatgagctatgcc 1242 Score = 129 bits (65), Expect = 1e-26 Identities = 117/133 (87%), Gaps = 1/133 (0%) Strand = Plus / Plus Query: 29 ctcccgtgcattgcacgggcggatgctcggttggcttgaccgat-gtaggctactaaacg 87 ||||||||| |||| ||||||| ||| ||||||||||||| | || ||||||||| || Sbjct: 732 ctcccgtgctctgcatgggcggaggcttcgttggcttgaccgcttgttggctactaagcg 791 Query: 88 catgagcagctttggacccgtgtctgctggtagatcccccgtcgttcgacggccgactat 147 ||||||||||||||||||||||||||| |||||||||||||| || | ||||||||||| Sbjct: 792 catgagcagctttggacccgtgtctgccggtagatcccccgttgtactacggccgactac 851 Query: 148 tggcgccgtgtcc 160 |||||||||||| Sbjct: 852 cggcgccgtgtcc 864
>emb|AJ315032.1|ETR315032 Eremopyrum triticeum IGS (partial), ETS and 18S rRNA gene (partial), isolate 6010001 IPSR Length = 1656 Score = 198 bits (100), Expect = 2e-47 Identities = 191/220 (86%), Gaps = 1/220 (0%) Strand = Plus / Plus Query: 324 ggcatgtaatgtgcctgttgttatcaaggcaacctcgctcgcgtcgttggtctcggatgt 383 |||| |||||||||||| || ||||||||||||||||||| || ||||||||||||||| Sbjct: 1042 ggcacgtaatgtgcctgctgctatcaaggcaacctcgctctcgctgttggtctcggatgt 1101 Query: 384 tgctcacgataaaggctcatggcccttttggttgcctcgacccgaccc-aagctcttcgt 442 | ||||||||||||| |||||||||||| ||||||||| ||||||||| ||||||| || Sbjct: 1102 tactcacgataaagggtcatggccctttcggttgcctccacccgacccaaagctctccga 1161 Query: 443 gctgagaacaaccggaactagggttgcctctacctctccacagttacgtggtaggatacg 502 |||||||||||||||| | || ||||||||||||||||||||||||||| | ||| Sbjct: 1162 attgagaacaaccggaacgggagtcgcctctacctctccacagttacgtggtttgtgacg 1221 Query: 503 caactctctgtgccgatcctcacgaacgatgagctatgcc 542 | ||||||| ||||||||||| | | ||||||||||||| Sbjct: 1222 cgactctctacgccgatcctcaaggaggatgagctatgcc 1261 Score = 109 bits (55), Expect = 1e-20 Identities = 104/119 (87%), Gaps = 1/119 (0%) Strand = Plus / Plus Query: 6 ctggacgcctccttcgagtaaacctcccgtgcattgcacgggcggatgctcggttggctt 65 ||||| |||||||| |||| | |||||||||| |||||| ||||| ||| ||||||||| Sbjct: 728 ctggatgcctccttagagtgatcctcccgtgctctgcacgagcggacgcttggttggctt 787 Query: 66 gaccgat-gtaggctactaaacgcatgagcagctttggacccgtgtctgctggtagatc 123 ||||| | || |||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 788 gaccgcttgttagctactaagcgcatgagcagctttggacccgtgtctgccggtagatc 846
>gb|M37269.1|WHTRGNOR Wheat Nor-D3 locus ribosomal RNA gene Length = 3673 Score = 198 bits (100), Expect = 2e-47 Identities = 204/236 (86%), Gaps = 2/236 (0%) Strand = Plus / Plus Query: 345 tatcaaggcaacctcgctcgcgtcgttggtctcggatgttgctcacgataaaggctcatg 404 |||||||||| |||||||| || ||||| ||||||| |||| |||||||||| || || Sbjct: 2985 tatcaaggcatcctcgctcccgcttttggtatcggatgctgctgacgataaagggtcgtg 3044 Query: 405 gcccttttggttgcctcgacccgacccaa-gctcttcgtgctgagaacaaccggaactag 463 ||||||| ||||||||||||||||||||| ||||| | |||||||||||||||| | Sbjct: 3045 gccctttcggttgcctcgacccgacccaaagctctctgaattgagaacaaccggaacagg 3104 Query: 464 ggttgcctctacctctccacagttacgtggtaggatacgcaactctctgtgccgatcctc 523 |||||||||||||||||||||||||||||||||||| || |||||||| |||||||||| Sbjct: 3105 agttgcctctacctctccacagttacgtggtaggatatgcgactctctgcgccgatcctc 3164 Query: 524 acgaacgatgagctatgcccgctggaaatcgacaaccggcttggctgttgcctctg 579 | | | ||||||||||| ||||| | | |||||||||||| |||||||||||||| Sbjct: 3165 aaggaggatgagctatg-ccgctcaagagcgacaaccggctcggctgttgcctctg 3219 Score = 101 bits (51), Expect = 3e-18 Identities = 100/115 (86%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 47 gcggatgctcggttggcttgaccgat-gtaggctactaaacgcatgagcagctttggacc 105 ||||| ||| |||||| ||||||| | || ||||||||| |||||||| ||||||||||| Sbjct: 2692 gcggaggcttggttggtttgaccgcttgttggctactaagcgcatgagtagctttggacc 2751 Query: 106 cgtgtctgctggtagatcccccgtcgttcgacggccgactattggcgccgtgtcc 160 ||||||||| |||||||||||||| || | |||||||||| |||||||||||| Sbjct: 2752 cgtgtctgccggtagatcccccgttgtactgcggccgactaccggcgccgtgtcc 2806 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 213 agtacccgacatacgggaagtggcgc 238 |||||||||| ||||||||||||||| Sbjct: 2855 agtacccgacctacgggaagtggcgc 2880
>emb|X66107.1|TU26S18S T.urartu rDNA for 26S rRNA (partial), external transcribed spacer, and 18S rRNA (partial) Length = 2495 Score = 194 bits (98), Expect = 2e-46 Identities = 269/322 (83%), Gaps = 3/322 (0%) Strand = Plus / Plus Query: 324 ggcatgtaatgtgcctgttgttatcaaggcaacctcgctcgcgtcgttggtctcggatgt 383 ||||||| ||||||| || | ||||||||||| ||||||| | ||||||| |||||| Sbjct: 2167 ggcatgttatgtgccggt-gctatcaaggcaatctcgctcctgctattggtcttggatgt 2225 Query: 384 tgctcacgataaaggctcatggcccttttggttgcctcgacccgacccaa-gctcttcgt 442 |||||| |||||||| || ||||||||| ||||||||||||||||||||| ||||| | Sbjct: 2226 tgctcatgataaagggtcgtggccctttcggttgcctcgacccgacccaaagctctctga 2285 Query: 443 gctgagaacaaccggaactagggttgcctctacctctccacagttacgtggtaggatacg 502 || ||||||||||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 2286 attgggaacaaccggaacaggagttgcctctacctctccacagttacgtggtaggatacg 2345 Query: 503 caactctctgtgccgatcctcacgaacgatgagctatgcccgctggaaatcgacaaccgg 562 | |||||||| ||||||||||| | ||||||||||||| ||||| | | ||||| |||| Sbjct: 2346 cgactctctgcgccgatcctcaaggacgatgagctatg-ccgctcaacagcgacacccgg 2404 Query: 563 cttggctgttgcctctgcgtctctatgcaagtggaaccggaggacgacaaccaatgctgg 622 | | || |||||| || || || | |||||||||| || ||| ||| || ||||||| Sbjct: 2405 cccgactcttgcctgtgagtttcgacgcaagtggaagcgcagggcgatggccgatgctgg 2464 Query: 623 acgtcatcgaggacgtgctacc 644 ||||| ||||||||||||||| Sbjct: 2465 gcgtcaccgaggacgtgctacc 2486 Score = 89.7 bits (45), Expect = 1e-14 Identities = 79/89 (88%), Gaps = 1/89 (1%) Strand = Plus / Plus Query: 39 ttgcacgggcggatgctcggttggcttgaccgat-gtaggctactaaacgcatgagcagc 97 ||||||||| ||| ||| |||||| ||||||| | || ||||||||| |||||||| ||| Sbjct: 1888 ttgcacgggaggaggcttggttggtttgaccgcttgttggctactaagcgcatgaggagc 1947 Query: 98 tttggacccgtgtctgctggtagatcccc 126 ||||||||||||||||| ||||||||||| Sbjct: 1948 tttggacccgtgtctgccggtagatcccc 1976
>emb|AJ315043.1|ABI315043 Aegilops bicornis IGS (partial), ETS and 18S rRNA gene (partial), isolate AE 105/31 IPK Length = 1644 Score = 194 bits (98), Expect = 2e-46 Identities = 226/266 (84%), Gaps = 2/266 (0%) Strand = Plus / Plus Query: 345 tatcaaggcaacctcgctcgcgtcgttggtctcggatgttgctcacgataaaggctcatg 404 ||||||||||||||||||| || ||||||||||||| |||| |||||||||| || || Sbjct: 1052 tatcaaggcaacctcgctctcgcttttggtctcggatgctgctgacgataaagggtcgtg 1111 Query: 405 gcccttttggttgcctcgacccgaccc-aagctcttcgtgctgagaacaaccggaactag 463 ||||||||||||||||||||||||||| ||||||| || |||||||||||||||| | Sbjct: 1112 gcccttttggttgcctcgacccgacccaaagctctccgaattgagaacaaccggaacagg 1171 Query: 464 ggttgcctctacctctccacagttacgtggtaggatacgcaactctctgtgccgatcctc 523 |||||||||||||| |||||||||| |||||||||||| |||||||| |||||||||| Sbjct: 1172 agttgcctctacctccccacagttaccgggtaggatacgcgactctctgggccgatcctc 1231 Query: 524 acgaacgatgagctatgcccgctggaaatcgacaaccggcttggctgttgcctctgcgtc 583 | | | |||||||||| |||||| | | ||||||| ||| |||||||| ||||| || Sbjct: 1232 aaggaggatgagctat-cccgctcaagagcgacaactggcccggctgttggctctgagtt 1290 Query: 584 tctatgcaagtggaaccggaggacga 609 || | | |||||||| || ||||||| Sbjct: 1291 tccacgaaagtggaagcgcaggacga 1316 Score = 109 bits (55), Expect = 1e-20 Identities = 92/103 (89%), Gaps = 1/103 (0%) Strand = Plus / Plus Query: 28 cctcccgtgcattgcacgggcggatgctcggttggcttgaccgat-gtaggctactaaac 86 |||||||||| |||||||||||| ||| |||||| ||||||| | || ||||||||| | Sbjct: 738 cctcccgtgctctgcacgggcggaggcttggttggtttgaccgcttgttggctactaagc 797 Query: 87 gcatgagcagctttggacccgtgtctgctggtagatcccccgt 129 ||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 798 gcatgagtagctttggacccgtgtctgccggtagatcccccgt 840
>emb|X51638.1|TURDNASPA T.urartu DNA for external transcribed spacer in rDNA Length = 1157 Score = 190 bits (96), Expect = 4e-45 Identities = 191/220 (86%), Gaps = 2/220 (0%) Strand = Plus / Plus Query: 324 ggcatgtaatgtgcctgttgttatcaaggcaacctcgctcgcgtcgttggtctcggatgt 383 ||||||| ||||||| || | ||||||||||| ||||||| | ||||||| |||||| Sbjct: 842 ggcatgttatgtgccggt-gctatcaaggcaatctcgctcctgctattggtcttggatgt 900 Query: 384 tgctcacgataaaggctcatggcccttttggttgcctcgacccgacccaa-gctcttcgt 442 |||||| |||||||| || ||||||||| ||||||||||||||||||||| ||||| | Sbjct: 901 tgctcatgataaagggtcgtggccctttcggttgcctcgacccgacccaaagctctctga 960 Query: 443 gctgagaacaaccggaactagggttgcctctacctctccacagttacgtggtaggatacg 502 || ||||||||||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 961 attgggaacaaccggaacaggagttgcctctacctctccacagttacgtggtaggatacg 1020 Query: 503 caactctctgtgccgatcctcacgaacgatgagctatgcc 542 | |||||||| ||||||||||| | ||||||||||||||| Sbjct: 1021 cgactctctgcgccgatcctcaaggacgatgagctatgcc 1060 Score = 89.7 bits (45), Expect = 1e-14 Identities = 79/89 (88%), Gaps = 1/89 (1%) Strand = Plus / Plus Query: 39 ttgcacgggcggatgctcggttggcttgaccgat-gtaggctactaaacgcatgagcagc 97 ||||||||| ||| ||| |||||| ||||||| | || ||||||||| |||||||| ||| Sbjct: 563 ttgcacgggaggaggcttggttggtttgaccgcttgttggctactaagcgcatgaggagc 622 Query: 98 tttggacccgtgtctgctggtagatcccc 126 ||||||||||||||||| ||||||||||| Sbjct: 623 tttggacccgtgtctgccggtagatcccc 651
>emb|AJ315041.1|ASQ315041 Aegilops squarrosa IGS (partial), ETS and 18S rRNA gene (partial), isolate 2220001 IPSR Length = 1639 Score = 186 bits (94), Expect = 6e-44 Identities = 225/266 (84%), Gaps = 2/266 (0%) Strand = Plus / Plus Query: 345 tatcaaggcaacctcgctcgcgtcgttggtctcggatgttgctcacgataaaggctcatg 404 ||||||||||||||||||| || ||||| ||||||| |||| || ||||||| || || Sbjct: 1047 tatcaaggcaacctcgctcccgcttttggtatcggatgctgctgacaataaagggtcgtg 1106 Query: 405 gcccttttggttgcctcgacccgacccaa-gctcttcgtgctgagaacaaccggaactag 463 ||||||| ||||||||||||||||||||| ||||| | |||||||||||||||| | Sbjct: 1107 gccctttcggttgcctcgacccgacccaaagctctctgaattgagaacaaccggaacagg 1166 Query: 464 ggttgcctctacctctccacagttacgtggtaggatacgcaactctctgtgccgatcctc 523 |||||||||||||||||||||||||||||||||||| || |||||||| |||||||||| Sbjct: 1167 agttgcctctacctctccacagttacgtggtaggatatgcgactctctgcgccgatcctc 1226 Query: 524 acgaacgatgagctatgcccgctggaaatcgacaaccggcttggctgttgcctctgcgtc 583 | | | |||||| |||| ||||| | | ||||||||||| |||||||||||||| || Sbjct: 1227 aaggaggatgagttatg-ccgctcaagagcgacaaccggcccggctgttgcctctgagtt 1285 Query: 584 tctatgcaagtggaaccggaggacga 609 || | | |||||||| || ||||||| Sbjct: 1286 tccacgaaagtggaagcgcaggacga 1311 Score = 63.9 bits (32), Expect = 6e-07 Identities = 98/116 (84%), Gaps = 3/116 (2%) Strand = Plus / Plus Query: 47 gcggatgctcggttggcttgaccgat-gtaggctactaaacgcatgagcagctttggacc 105 ||||| ||| |||||| ||||||| | || ||||||||| |||||||| ||||||||||| Sbjct: 754 gcggaggcttggttggtttgaccgcttgttggctactaagcgcatgagtagctttggacc 813 Query: 106 cgtg-tctgctggtagatcccccgtcgttcgacggccgactattggcgccgtgtcc 160 |||| ||||| ||||||||||||| || |||||||||| |||||||||||| Sbjct: 814 cgtgttctgc-cgtagatcccccgttgtattgcggccgactaccggcgccgtgtcc 868 Score = 48.1 bits (24), Expect = 0.036 Identities = 36/40 (90%) Strand = Plus / Plus Query: 199 agtgcttgcatatgagtacccgacatacgggaagtggcgc 238 ||||||||| | | |||||||||| ||||||||||||||| Sbjct: 903 agtgcttgcgtgttagtacccgacctacgggaagtggcgc 942
>emb|X66111.1|AU18SRRNA Aegilops umbellutata 5'-end of 18S rRNA gene Length = 1574 Score = 182 bits (92), Expect = 1e-42 Identities = 216/252 (85%), Gaps = 4/252 (1%) Strand = Plus / Plus Query: 348 caaggcaacctcgctcgcgtcgttggtctcggatgttgctcacgataaaggctcatggcc 407 |||||||||||||||| || ||||||||||||| |||| ||||||| || || ||||| Sbjct: 1255 caaggcaacctcgctcccgcttttggtctcggatgctgctgacgataaggg-tcgtggcc 1313 Query: 408 cttttggttgcctcgacccgacccaa-gctcttcgtgctgagaacaaccggaactagggt 466 |||| ||||||||||||||||||||| ||||| || |||||||||||||||| | || Sbjct: 1314 ctttcggttgcctcgacccgacccaaagctctccgaattgagaacaaccggaacaggagt 1373 Query: 467 tgcctctacctctccacagttacgtggtaggatacgcaactctctgtgccgatcctcacg 526 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| | Sbjct: 1374 tgcctctacctctccacagttacgtggtaggatacgcgactctctgcgccgatcctcaag 1433 Query: 527 aacgatgagctatgcccgctggaaatcgacaaccggcttggctgttgcctctgcgtctct 586 | ||||||| ||| ||||| | | ||||||||||| ||||||||||| || || || Sbjct: 1434 gaggatgagc-atg-ccgctcaagagcgacaaccggcccggctgttgcctttgagtttcc 1491 Query: 587 atgcaagtggaa 598 ||| |||||||| Sbjct: 1492 atgaaagtggaa 1503 Score = 79.8 bits (40), Expect = 1e-11 Identities = 99/116 (85%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 47 gcggatgctcggttggcttgaccgat-gtaggctactaaacgcatgagcagctttggacc 105 ||||| ||| |||||| ||||||| | || ||||||||| |||||||| |||||| |||| Sbjct: 956 gcggaggcttggttggtttgaccgcttgttggctactaagcgcatgagtagcttttgacc 1015 Query: 106 cgtgtctgctggtagatccccc-gtcgttcgacggccgactattggcgccgtgtcc 160 ||||||||| |||||||||||| || || | |||||||||| |||||||||||| Sbjct: 1016 cgtgtctgccggtagatcccccggttgtactgcggccgactaccggcgccgtgtcc 1071 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 199 agtgcttgcatatgagtacccgacatacgggaagtgg 235 ||||||||||| |||||||||| |||||||||||| Sbjct: 1106 agtgcttgcatgctagtacccgacctacgggaagtgg 1142
>emb|AJ315049.1|AUN315049 Aegilops uniaristata IGS (partial), ETS and 18S rRNA gene (partial), isolate HAE 156/94 IPK Length = 1465 Score = 182 bits (92), Expect = 1e-42 Identities = 232/276 (84%), Gaps = 2/276 (0%) Strand = Plus / Plus Query: 324 ggcatgtaatgtgcctgttgttatcaaggcaacctcgctcgcgtcgttggtctcggatgt 383 ||||||| | ||||| | || |||||||||||||||| || | ||||||||||||| Sbjct: 852 ggcatgttacgtgcccgctgctatcaaggcaacctcgatcccacttttggtctcggatgc 911 Query: 384 tgctcacgataaaggctcatggcccttttggttgcctcgacccgacccaa-gctcttcgt 442 |||| | |||||||| | ||||||||||||||||||||||||||||||| ||||| || Sbjct: 912 tgctgatgataaagggttgtggcccttttggttgcctcgacccgacccaaagctctccga 971 Query: 443 gctgagaacaaccggaactagggttgcctctacctctccacagttacgtggtaggatacg 502 ||||||||||| |||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 972 attgagaacaaccagaacaggagttgcctctacctctccacagttacgtggtaggatacg 1031 Query: 503 caactctctgtgccgatcctcacgaacgatgagctatgcccgctggaaatcgacaaccgg 562 | |||||||| ||||||||||| | | |||||| |||| ||||| | | |||||| ||| Sbjct: 1032 cgactctctgcgccgatcctcaaggaggatgagttatg-ccgctcaagagcgacaatcgg 1090 Query: 563 cttggctgttgcctctgcgtctctatgcaagtggaa 598 | |||||||||||||| || || ||| |||||||| Sbjct: 1091 cccggctgttgcctctgagtttccatgaaagtggaa 1126 Score = 99.6 bits (50), Expect = 1e-17 Identities = 114/134 (85%), Gaps = 1/134 (0%) Strand = Plus / Plus Query: 28 cctcccgtgcattgcacgggcggatgctcggttggcttgaccgat-gtaggctactaaac 86 |||||||||| |||||||||||| ||| |||||| ||||||| | || ||||||||| | Sbjct: 559 cctcccgtgctctgcacgggcggaggcttggttggtttgaccgcttgttggctactaagc 618 Query: 87 gcatgagcagctttggacccgtgtctgctggtagatcccccgtcgttcgacggccgacta 146 ||||||| ||||||||||||||| ||| |||||||||||||| || | |||||||||| Sbjct: 619 gcatgagtagctttggacccgtggatgccggtagatcccccgttgtactgcggccgacta 678 Query: 147 ttggcgccgtgtcc 160 || ||||||||| Sbjct: 679 ccggtgccgtgtcc 692 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 199 agtgcttgcatatgagtacccgacatacgggaagtgg 235 ||||||||||| |||||||||| |||||||||||| Sbjct: 727 agtgcttgcatgctagtacccgacctacgggaagtgg 763
>emb|AJ315031.1|DVI315031 Dasypyrum villosum IGS (partial), ETS and 18S rRNA gene (partial), isolate 501004 IPSR Length = 1622 Score = 161 bits (81), Expect = 3e-36 Identities = 193/229 (84%), Gaps = 1/229 (0%) Strand = Plus / Plus Query: 297 gcgcttgtggcgttgcctcgtatcacgggcatgtaatgtgcctgttgttatcaaggcaac 356 ||||||| |||||||||||||| | |||| ||| |||||| || |||||||||||| Sbjct: 981 gcgcttgcggcgttgcctcgtagtgctggcacataacgtgcctcctgctatcaaggcaac 1040 Query: 357 ctcgctcgcgtcgttggtctcggatgttgctcacgataaaggctcatggcccttttggtt 416 |||| || ||| ||||||| |||||||| |||||||||||| || |||||| || |||| Sbjct: 1041 ctcgttcccgttcttggtcttggatgttgttcacgataaagggtcgtggcccattcggtt 1100 Query: 417 gcctcgacccgac-ccaagctcttcgtgctgagaacaaccggaactagggttgcctctac 475 ||||||||||||| | ||||||| || |||||||||||||||| ||||||||||| Sbjct: 1101 gcctcgacccgacactaagctctccgaactgagaacaaccggaatggaagttgcctctac 1160 Query: 476 ctctccacagttacgtggtaggatacgcaactctctgtgccgatcctca 524 |||||||||| |||||||||||||| || ||||| || ||||||||||| Sbjct: 1161 ctctccacagctacgtggtaggatatgcgactctgtgcgccgatcctca 1209 Score = 131 bits (66), Expect = 3e-27 Identities = 109/122 (89%), Gaps = 1/122 (0%) Strand = Plus / Plus Query: 40 tgcacgggcggatgctcggttggcttgaccgat-gtaggctactaaacgcatgagcagct 98 |||||||||||| ||| |||||||||||||| | || ||||||||| ||||||||||||| Sbjct: 727 tgcacgggcggaggcttggttggcttgaccgcttgttggctactaatcgcatgagcagct 786 Query: 99 ttggacccgtgtctgctggtagatcccccgtcgttcgacggccgactattggcgccgtgt 158 |||||||||||||||| |||||||||||||| || | |||||||||| |||||||||| Sbjct: 787 ttggacccgtgtctgccggtagatcccccgttgtactgcggccgactaccggcgccgtgt 846 Query: 159 cc 160 || Sbjct: 847 cc 848
>emb|X53792.1|HB18SRP H. bulbosum 18S ribsomal DNA 5' flank (intergenic spacer) Length = 1230 Score = 137 bits (69), Expect = 5e-29 Identities = 128/145 (88%), Gaps = 2/145 (1%) Strand = Plus / Plus Query: 326 catgtaatgtgcctgttgttatcaaggcaacctcgctcgcgtcgttggtctcggatgttg 385 ||||||| ||| ||||| |||||||| ||||| ||||||||||||||||| |||||||| Sbjct: 403 catgtaacatgcttgttgctatcaagg-aaccttgctcgcgtcgttggtcttggatgttg 461 Query: 386 ctcacgataaaggctcatggcccttttggttgcctcgacccgaccc-aagctcttcgtgc 444 |||| ||||||||||| |||||| ||||||||||||||||| |||| ||||||| ||| Sbjct: 462 ctcatgataaaggctcgtggcccatttggttgcctcgacccaaccctaagctctacgtct 521 Query: 445 tgagaacaaccggaactagggttgc 469 |||||||||||||||| || ||||| Sbjct: 522 tgagaacaaccggaacaagagttgc 546 Score = 113 bits (57), Expect = 7e-22 Identities = 85/93 (91%), Gaps = 1/93 (1%) Strand = Plus / Plus Query: 500 acgcaactctctgtgccgatcctcacgaacgatgagctatgcccgctggaaatcgacaac 559 ||||||||||||||||||| ||||| ||||||||||||||||||||| |||| |||||| Sbjct: 550 acgcaactctctgtgccgaccctcaagaacgatgagctatgcccgctcgaaagagacaac 609 Query: 560 cggcttggctgttgcctctgcgtctctatgcaa 592 |||||| ||||||||||||| || ||||||||| Sbjct: 610 cggctt-gctgttgcctctgtgtttctatgcaa 641
>emb|X04075.1|TARDN2 Wheat 26S - 18S rDNA nontranscribed spacer region 2 (pTA 250) located between subrepeat region and 18S gene on chromosome 6B Length = 965 Score = 115 bits (58), Expect = 2e-22 Identities = 116/134 (86%), Gaps = 1/134 (0%) Strand = Plus / Plus Query: 28 cctcccgtgcattgcacgggcggatgctcggttggcttgaccgat-gtaggctactaaac 86 |||||||||| |||| ||||||| ||| |||||| ||||||| | || ||||||||| | Sbjct: 813 cctcccgtgctatgcatgggcggaggcttggttggtttgaccgcttgttggctactaagc 872 Query: 87 gcatgagcagctttggacccgtgtctgctggtagatcccccgtcgttcgacggccgacta 146 ||||||| |||||||||||||||||||| |||||||||||||| || | |||||||||| Sbjct: 873 gcatgagtagctttggacccgtgtctgccggtagatcccccgttgtactgcggccgacta 932 Query: 147 ttggcgccgtgtcc 160 |||||||||||| Sbjct: 933 ccggcgccgtgtcc 946
>emb|X74820.1|ASRDNAS A.sativa rDNA spacer Length = 4098 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 89 atgagcagctttggacccgtgtctgctggtagatcccccgtc 130 ||||| ||||||||||||||||||| || ||||||||||||| Sbjct: 3183 atgagtagctttggacccgtgtctgttgttagatcccccgtc 3224 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Plus Query: 369 gttggtctcggatgttgctcacgataaaggctcatggcccttttggttgcc 419 |||||| ||||||| ||||||||||| || | ||||||||| |||||||| Sbjct: 3452 gttggtttcggatgccgctcacgataatggttaatggcccttctggttgcc 3502
>ref|XM_392124.2| PREDICTED: Apis mellifera similar to ENSANGP00000016735 (LOC408582), mRNA Length = 4072 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 618 gctggacgtcatcgaggacgtg 639 |||||||||||||||||||||| Sbjct: 1932 gctggacgtcatcgaggacgtg 1911
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 52 tgctcggttggcttgaccgat 72 ||||||||||||||||||||| Sbjct: 1321394 tgctcggttggcttgaccgat 1321414
>emb|AJ238130.1|MTR238130 Miscanthus transmorrisonensis 25S rRNA and 17S rRNA genes and internal transcribed spacer 1 (ITS1),isolate 001 Length = 1855 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 297 gcgcttgtggcgttgcctcgt 317 ||||||||||||||||||||| Sbjct: 1618 gcgcttgtggcgttgcctcgt 1638
>emb|AJ004830.1|MTAJ4830 Miscanthus transmorrisonensis 17S and 25S rRNA genes and intergenic spacer Length = 1882 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 297 gcgcttgtggcgttgcctcgt 317 ||||||||||||||||||||| Sbjct: 1645 gcgcttgtggcgttgcctcgt 1665
>gb|AC020558.4| Homo sapiens BAC clone RP11-524F11 from 17, complete sequence Length = 183334 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 ttggacccgtgtctgctggt 118 |||||||||||||||||||| Sbjct: 50689 ttggacccgtgtctgctggt 50670
>gb|AC078797.20| Homo sapiens 3 BAC RP11-125E8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 166704 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 tgtaatgtgcctgttgttat 347 |||||||||||||||||||| Sbjct: 107656 tgtaatgtgcctgttgttat 107675
>dbj|AK026675.1| Homo sapiens cDNA: FLJ23022 fis, clone LNG01117 Length = 2145 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 ttggacccgtgtctgctggt 118 |||||||||||||||||||| Sbjct: 1625 ttggacccgtgtctgctggt 1644
>gb|CP000021.1| Vibrio fischeri ES114 chromosome II, complete sequence Length = 1332022 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 tctcggatgttgctcacgat 393 |||||||||||||||||||| Sbjct: 935733 tctcggatgttgctcacgat 935752 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,970,905 Number of Sequences: 3902068 Number of extensions: 2970905 Number of successful extensions: 44417 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 39 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 44191 Number of HSP's gapped (non-prelim): 154 length of query: 644 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 621 effective length of database: 17,143,297,704 effective search space: 10645987874184 effective search space used: 10645987874184 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
