ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd26i09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK107724.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 2e-27
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 127 3e-26
3dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic D... 127 3e-26
4gb|AC113009.8| Homo sapiens chromosome 8, clone RP11-7F12, compl... 46 0.10
5dbj|AP000844.4| Homo sapiens genomic DNA, chromosome 11q clone:R... 46 0.10
6gb|AC155099.1| Medicago truncatula chromosome 7 BAC clone mth2-1... 44 0.40
7ref|NM_173008.1| Mus musculus RIKEN cDNA A430110N23 gene (A43011... 44 0.40
8dbj|AK165666.1| Mus musculus RCB-0545 OHTA cDNA, RIKEN full-leng... 44 0.40
9dbj|AK079906.1| Mus musculus 0 day neonate thymus cDNA, RIKEN fu... 44 0.40
10gb|AC157563.12| Mus musculus chromosome 7, clone RP23-414I24, co... 44 0.40
11gb|BC085465.1| Danio rerio zgc:101886, mRNA (cDNA clone MGC:1018... 42 1.6
12ref|XM_474637.1| Oryza sativa (japonica cultivar-group), predic... 42 1.6
13ref|NM_193734.1| Oryza sativa (japonica cultivar-group), predic... 42 1.6
14gb|AY596295.1| Haloarcula marismortui ATCC 43049 plasmid pNG600,... 42 1.6
15gb|AY062183.1| Oryza sativa HAP3 transcriptional-activator (LEC1... 42 1.6
16gb|AF012542.1| Emiliania huxleyi putative calcium binding protei... 42 1.6
17gb|AY099362.1| Drosophila melanogaster eyegone (eyg) mRNA, compl... 42 1.6
18emb|AL731589.3|OSJN00239 Oryza sativa genomic DNA, chromosome 4,... 42 1.6
19gb|AC093438.2| Drosophila melanogaster 3L BAC RP98-26C20 (Roswel... 42 1.6
20ref|NM_079318.2| Drosophila melanogaster eyegone CG10488-RA, tra... 42 1.6
21ref|NM_001014582.1| Drosophila melanogaster eyegone CG10488-RB, ... 42 1.6
22gb|AC022919.8| Homo sapiens chromosome 18, clone RP11-46D1, comp... 42 1.6
23gb|AC091223.2| Drosophila melanogaster 3L BAC RP98-48G6 (Roswell... 42 1.6
24gb|AC020613.33|AC020613 Homo sapiens 12 BAC RP11-508P1 (Roswell ... 42 1.6
25dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
26dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
27ref|NM_001007374.1| Danio rerio zgc:101886 (zgc:101886), mRNA 42 1.6
28dbj|AP003435.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
29dbj|AP004791.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
30dbj|AB026636.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 42 1.6
31emb|X58338.1|ATGLYRP A.thaliana gene encoding a glycine-rich pro... 42 1.6
32dbj|AK109660.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
33gb|BT021470.1| Drosophila melanogaster AT09010 full insert cDNA 42 1.6
34gb|AE003541.3| Drosophila melanogaster chromosome 3L, section 44... 42 1.6
35gb|AF091739.1|AF091739 Drosophila melanogaster Eyegone (eyg) mRN... 42 1.6
36ref|NM_185520.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.2
37ref|XM_420991.1| PREDICTED: Gallus gallus similar to RIC3 (LOC42... 40 6.2
38gb|AC125357.4| Mus musculus BAC clone RP23-235J18 from chromosom... 40 6.2
39gb|AC132342.3| Mus musculus BAC clone RP24-168N15 from chromosom... 40 6.2
40gb|AC125536.3| Mus musculus BAC clone RP24-142N21 from chromosom... 40 6.2
41gb|AC124397.5| Mus musculus BAC clone RP24-348J16 from chromosom... 40 6.2
42gb|AC113292.6| Mus musculus chromosome 15, clone RP23-418M3, com... 40 6.2
43gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 40 6.2
44emb|AL390994.30| Human DNA sequence from clone RP11-190J18 on ch... 40 6.2
45emb|AL353736.11| Human DNA sequence from clone RP11-412P1 on chr... 40 6.2
46gb|AC165145.2| Mus musculus BAC clone RP24-385A10 from chromosom... 40 6.2
47gb|AC150252.1| Unidentified bacterium clone zdt-48a5, complete s... 40 6.2
48dbj|AK140755.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 40 6.2
49gb|AC079880.6| Homo sapiens BAC clone RP11-453E17 from 4, comple... 40 6.2
50gb|AC159710.9| Mus musculus 10 BAC RP24-325N16 (Roswell Park Can... 40 6.2
51emb|CR353861.1| Gallus gallus finished cDNA, clone ChEST240f10 40 6.2
52dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
53gb|AC011520.3|AC011520 Homo sapiens chromosome 19 clone LLNLF-20... 40 6.2
54dbj|AP004316.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
55dbj|AP003816.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
56gb|AF013262.1|AF013262 Mus musculus lumican (Ldc) gene, complete... 40 6.2
57gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 6.2
58gb|AC004780.1|AC004780 Homo sapiens chromosome 19, cosmid F17127... 40 6.2
59gb|AC122881.4| Mus musculus BAC clone RP23-79J21 from 13, comple... 40 6.2
60emb|AL132712.4|CNS01DTD Human chromosome 14 DNA sequence BAC C-2... 40 6.2 
>dbj|AK107724.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-E12, full
           insert sequence
          Length = 794

 Score =  131 bits (66), Expect = 2e-27
 Identities = 116/133 (87%)
 Strand = Plus / Plus

                                                                       
Query: 315 ccgccctcctccgacccaccgcctccatctcctcaagattggcaagagaggttgtcaaga 374
           ||||||||||| || || ||||| |  ||||| || | ||||||||||||||| ||||||
Sbjct: 261 ccgccctcctctgagccgccgccacggtctccccacggttggcaagagaggttatcaaga 320

                                                                       
Query: 375 ttacaggataccttacggatattctttgcagttctgttctggatgtcactgtttttctgg 434
           ||||||||||   |||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 321 ttacaggataggatacgcatattctttgcagttctgttctggatggcactgtttttctgg 380

                        
Query: 435 ggcagngcttggg 447
           || || |||||||
Sbjct: 381 ggaagtgcttggg 393
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  127 bits (64), Expect = 3e-26
 Identities = 87/95 (91%)
 Strand = Plus / Plus

                                                                            
Query: 353      ttggcaagagaggttgtcaagattacaggataccttacggatattctttgcagttctgtt 412
                ||||||||||||||| ||||||||||||||||   |||| ||||||||||||||||||||
Sbjct: 16644776 ttggcaagagaggttatcaagattacaggataggatacgcatattctttgcagttctgtt 16644835

                                                   
Query: 413      ctggatgtcactgtttttctggggcagngcttggg 447
                ||||||| |||||||||||||||| || |||||||
Sbjct: 16644836 ctggatggcactgtttttctggggaagtgcttggg 16644870



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 103      ctcaccgatggcgacgacgag 123
                |||||||||||||||||||||
Sbjct: 17786029 ctcaccgatggcgacgacgag 17786049
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>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1109A06
          Length = 171438

 Score =  127 bits (64), Expect = 3e-26
 Identities = 87/95 (91%)
 Strand = Plus / Plus

                                                                         
Query: 353   ttggcaagagaggttgtcaagattacaggataccttacggatattctttgcagttctgtt 412
             ||||||||||||||| ||||||||||||||||   |||| ||||||||||||||||||||
Sbjct: 74725 ttggcaagagaggttatcaagattacaggataggatacgcatattctttgcagttctgtt 74784

                                                
Query: 413   ctggatgtcactgtttttctggggcagngcttggg 447
             ||||||| |||||||||||||||| || |||||||
Sbjct: 74785 ctggatggcactgtttttctggggaagtgcttggg 74819
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>gb|AC113009.8| Homo sapiens chromosome 8, clone RP11-7F12, complete sequence
          Length = 159520

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 51    cctcctttccctccctggctgcc 73
             |||||||||||||||||||||||
Sbjct: 29667 cctcctttccctccctggctgcc 29689
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>dbj|AP000844.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-697E14, complete
             sequences
          Length = 199079

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 51    cctcctttccctccctggctgcc 73
             |||||||||||||||||||||||
Sbjct: 74721 cctcctttccctccctggctgcc 74699
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>gb|AC155099.1| Medicago truncatula chromosome 7 BAC clone mth2-144f20, complete
             sequence
          Length = 132371

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 154   cacctccaccggcacctcctcc 175
             ||||||||||||||||||||||
Sbjct: 53488 cacctccaccggcacctcctcc 53509



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 156   cctccaccggcacctcctcc 175
             ||||||||||||||||||||
Sbjct: 53322 cctccaccggcacctcctcc 53341



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 156   cctccaccggcacctcctcc 175
             ||||||||||||||||||||
Sbjct: 53100 cctccaccggcacctcctcc 53119
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>ref|NM_173008.1| Mus musculus RIKEN cDNA A430110N23 gene (A430110N23Rik), mRNA
          Length = 4261

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 57 ttccctccctggctgcctcctactcc 82
          ||||||||||||||||||||| ||||
Sbjct: 31 ttccctccctggctgcctcctcctcc 56
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>dbj|AK165666.1| Mus musculus RCB-0545 OHTA cDNA, RIKEN full-length enriched
           library, clone:G430123P05 product:Hypothetical speract
           receptor, full insert sequence
          Length = 4351

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 57  ttccctccctggctgcctcctactcc 82
           ||||||||||||||||||||| ||||
Sbjct: 92  ttccctccctggctgcctcctcctcc 117
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>dbj|AK079906.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length
          enriched library, clone:A430110N23 product:hypothetical
          Speract receptor (Scavenger receptor) containing
          protein, full insert sequence
          Length = 4286

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 57 ttccctccctggctgcctcctactcc 82
          ||||||||||||||||||||| ||||
Sbjct: 31 ttccctccctggctgcctcctcctcc 56
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>gb|AC157563.12| Mus musculus chromosome 7, clone RP23-414I24, complete sequence
          Length = 200040

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 57    ttccctccctggctgcctcctactcc 82
             ||||||||||||||||||||| ||||
Sbjct: 92775 ttccctccctggctgcctcctcctcc 92800
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>gb|BC085465.1| Danio rerio zgc:101886, mRNA (cDNA clone MGC:101886 IMAGE:7254092),
           complete cds
          Length = 2287

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 332 accgcctccatctcctcaaga 352
           |||||||||||||||||||||
Sbjct: 791 accgcctccatctcctcaaga 811
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>ref|XM_474637.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1674

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 217 actaccaccagcagcaggccc 237
           |||||||||||||||||||||
Sbjct: 390 actaccaccagcagcaggccc 410
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>ref|NM_193734.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1302

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 103 ctcaccgatggcgacgacgag 123
           |||||||||||||||||||||
Sbjct: 167 ctcaccgatggcgacgacgag 187
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>gb|AY596295.1| Haloarcula marismortui ATCC 43049 plasmid pNG600, complete sequence
          Length = 155300

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 106   accgatggcgacgacgagctcccct 130
             ||||||||||||| |||||||||||
Sbjct: 74565 accgatggcgacgccgagctcccct 74589
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>gb|AY062183.1| Oryza sativa HAP3 transcriptional-activator (LEC1A) mRNA, complete
           cds
          Length = 1072

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 114 cgacgacgagctcccctcgtc 134
           |||||||||||||||||||||
Sbjct: 732 cgacgacgagctcccctcgtc 712
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>gb|AF012542.1| Emiliania huxleyi putative calcium binding protein (gpa) mRNA,
           complete cds
          Length = 1458

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 156 cctccaccggcacctcctccg 176
           |||||||||||||||||||||
Sbjct: 669 cctccaccggcacctcctccg 649
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>gb|AY099362.1| Drosophila melanogaster eyegone (eyg) mRNA, complete cds
          Length = 2654

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 213  agccactaccaccagcagcag 233
            |||||||||||||||||||||
Sbjct: 1919 agccactaccaccagcagcag 1939
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>emb|AL731589.3|OSJN00239 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039G19,
             complete sequence
          Length = 144144

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 217   actaccaccagcagcaggccc 237
             |||||||||||||||||||||
Sbjct: 54230 actaccaccagcagcaggccc 54210
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>gb|AC093438.2| Drosophila melanogaster 3L BAC RP98-26C20 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 167344

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 213    agccactaccaccagcagcag 233
              |||||||||||||||||||||
Sbjct: 141648 agccactaccaccagcagcag 141628
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>ref|NM_079318.2| Drosophila melanogaster eyegone CG10488-RA, transcript variant A
            (eyg), mRNA
          Length = 2653

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 213  agccactaccaccagcagcag 233
            |||||||||||||||||||||
Sbjct: 1919 agccactaccaccagcagcag 1939
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>ref|NM_001014582.1| Drosophila melanogaster eyegone CG10488-RB, transcript variant B
            (eyg), mRNA
          Length = 2586

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 213  agccactaccaccagcagcag 233
            |||||||||||||||||||||
Sbjct: 1852 agccactaccaccagcagcag 1872
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>gb|AC022919.8| Homo sapiens chromosome 18, clone RP11-46D1, complete sequence
          Length = 159749

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 59     ccctccctggctgcctcctac 79
              |||||||||||||||||||||
Sbjct: 110382 ccctccctggctgcctcctac 110402
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>gb|AC091223.2| Drosophila melanogaster 3L BAC RP98-48G6 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 170988

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 213   agccactaccaccagcagcag 233
             |||||||||||||||||||||
Sbjct: 32534 agccactaccaccagcagcag 32514
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>gb|AC020613.33|AC020613 Homo sapiens 12 BAC RP11-508P1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 40199

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 59    ccctccctggctgcctcctactcca 83
             |||||||||||| ||||||||||||
Sbjct: 21937 ccctccctggcttcctcctactcca 21961
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 217     actaccaccagcagcaggccc 237
               |||||||||||||||||||||
Sbjct: 5077957 actaccaccagcagcaggccc 5077937
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 114      cgacgacgagctcccctcgtc 134
                |||||||||||||||||||||
Sbjct: 10149366 cgacgacgagctcccctcgtc 10149346
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>ref|NM_001007374.1| Danio rerio zgc:101886 (zgc:101886), mRNA
          Length = 2287

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 332 accgcctccatctcctcaaga 352
           |||||||||||||||||||||
Sbjct: 791 accgcctccatctcctcaaga 811
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>dbj|AP003435.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0455H03
          Length = 175947

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 103   ctcaccgatggcgacgacgag 123
             |||||||||||||||||||||
Sbjct: 33151 ctcaccgatggcgacgacgag 33171
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>dbj|AP004791.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0491D10
          Length = 162039

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 114    cgacgacgagctcccctcgtc 134
              |||||||||||||||||||||
Sbjct: 115732 cgacgacgagctcccctcgtc 115712
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>dbj|AB026636.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K14A17
          Length = 92620

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 155   acctccaccggcacctcctcc 175
             |||||||||||||||||||||
Sbjct: 47189 acctccaccggcacctcctcc 47169
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>emb|X58338.1|ATGLYRP A.thaliana gene encoding a glycine-rich protein
          Length = 5500

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 155  acctccaccggcacctcctcc 175
            |||||||||||||||||||||
Sbjct: 3004 acctccaccggcacctcctcc 2984
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>dbj|AK109660.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-E08, full
           insert sequence
          Length = 924

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 114 cgacgacgagctcccctcgtc 134
           |||||||||||||||||||||
Sbjct: 727 cgacgacgagctcccctcgtc 707
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>gb|BT021470.1| Drosophila melanogaster AT09010 full insert cDNA
          Length = 2331

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 213  agccactaccaccagcagcag 233
            |||||||||||||||||||||
Sbjct: 1531 agccactaccaccagcagcag 1551
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>gb|AE003541.3| Drosophila melanogaster chromosome 3L, section 44 of 83 of the complete
              sequence
          Length = 265524

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 213    agccactaccaccagcagcag 233
              |||||||||||||||||||||
Sbjct: 152686 agccactaccaccagcagcag 152666
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>gb|AF091739.1|AF091739 Drosophila melanogaster Eyegone (eyg) mRNA, complete cds
          Length = 2655

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 213  agccactaccaccagcagcag 233
            |||||||||||||||||||||
Sbjct: 1919 agccactaccaccagcagcag 1939
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>ref|NM_185520.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1203

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 156 cctccaccggcacctcctcc 175
           ||||||||||||||||||||
Sbjct: 641 cctccaccggcacctcctcc 622
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>ref|XM_420991.1| PREDICTED: Gallus gallus similar to RIC3 (LOC423059), mRNA
          Length = 1395

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 38  cagccgtgctgcccctcctttccc 61
           |||||| |||||||||||||||||
Sbjct: 246 cagccgagctgcccctcctttccc 269
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>gb|AC125357.4| Mus musculus BAC clone RP23-235J18 from chromosome 9, complete sequence
          Length = 217511

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 68     gctgcctcctactccaacct 87
              ||||||||||||||||||||
Sbjct: 127601 gctgcctcctactccaacct 127582
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>gb|AC132342.3| Mus musculus BAC clone RP24-168N15 from chromosome 12, complete sequence
          Length = 165700

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 58     tccctccctggctgcctcctactc 81
              ||||| ||||||||||||||||||
Sbjct: 107121 tccctacctggctgcctcctactc 107144
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>gb|AC125536.3| Mus musculus BAC clone RP24-142N21 from chromosome 8, complete sequence
          Length = 199356

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 57    ttccctccctggctgcctcc 76
             ||||||||||||||||||||
Sbjct: 77073 ttccctccctggctgcctcc 77054
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>gb|AC124397.5| Mus musculus BAC clone RP24-348J16 from chromosome 13, complete sequence
          Length = 191713

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 139    accactccccttctncacctcca 161
              |||||||||||||| ||||||||
Sbjct: 166131 accactccccttctccacctcca 166153
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>gb|AC113292.6| Mus musculus chromosome 15, clone RP23-418M3, complete sequence
          Length = 218109

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 133    tctcctaccactccccttct 152
              ||||||||||||||||||||
Sbjct: 198277 tctcctaccactccccttct 198296
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 223     accagcagcaggcccggttt 242
               ||||||||||||||||||||
Sbjct: 3296104 accagcagcaggcccggttt 3296123
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>emb|AL390994.30| Human DNA sequence from clone RP11-190J18 on chromosome 1 Contains the 5'
              end of the gene for a novel protein (KIAA1626), complete
              sequence
          Length = 115136

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 58     tccctccctggctgcctcct 77
              ||||||||||||||||||||
Sbjct: 105535 tccctccctggctgcctcct 105554
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>emb|AL353736.11| Human DNA sequence from clone RP11-412P1 on chromosome 9 Contains the 3'
              end of the CDK5RAP2 gene for CDK5 regulatory subunit
              associated protein 2 (C48), complete sequence
          Length = 148875

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 52     ctcctttccctccctggctgcctc 75
              ||||| ||||||||||||||||||
Sbjct: 127567 ctcctctccctccctggctgcctc 127544
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>gb|AC165145.2| Mus musculus BAC clone RP24-385A10 from chromosome 13, complete
            sequence
          Length = 181942

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 49   cccctcctttccctccctgg 68
            ||||||||||||||||||||
Sbjct: 6747 cccctcctttccctccctgg 6766
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>gb|AC150252.1| Unidentified bacterium clone zdt-48a5, complete sequence
          Length = 38838

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   gctgccggacccttgccgcc 319
             ||||||||||||||||||||
Sbjct: 16584 gctgccggacccttgccgcc 16565
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>dbj|AK140755.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
            library, clone:C130005J24 product:hypothetical protein,
            full insert sequence
          Length = 5439

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 58   tccctccctggctgcctcctactc 81
            ||||| ||||||||||||||||||
Sbjct: 2071 tccctacctggctgcctcctactc 2048
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>gb|AC079880.6| Homo sapiens BAC clone RP11-453E17 from 4, complete sequence
          Length = 166862

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 50    ccctcctttccctccctggctgcctcct 77
             |||||||||||||||||  |||||||||
Sbjct: 83988 ccctcctttccctccctccctgcctcct 84015
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>gb|AC159710.9| Mus musculus 10 BAC RP24-325N16 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 204302

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 214    gccactaccaccagcagcag 233
              ||||||||||||||||||||
Sbjct: 101026 gccactaccaccagcagcag 101045
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>emb|CR353861.1| Gallus gallus finished cDNA, clone ChEST240f10
          Length = 820

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 38  cagccgtgctgcccctcctttccc 61
           |||||| |||||||||||||||||
Sbjct: 393 cagccgagctgcccctcctttccc 370
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 156      cctccaccggcacctcctcc 175
                ||||||||||||||||||||
Sbjct: 29215636 cctccaccggcacctcctcc 29215655
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>gb|AC011520.3|AC011520 Homo sapiens chromosome 19 clone LLNLF-205H1, complete sequence
          Length = 42718

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 133  tctcctaccactccccttct 152
            ||||||||||||||||||||
Sbjct: 4898 tctcctaccactccccttct 4917
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>dbj|AP004316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
            clone:P0597G07
          Length = 152928

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 156  cctccaccggcacctcctcc 175
            ||||||||||||||||||||
Sbjct: 4325 cctccaccggcacctcctcc 4344
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>dbj|AP003816.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1165_F02
          Length = 125993

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 156   cctccaccggcacctcctcc 175
             ||||||||||||||||||||
Sbjct: 55710 cctccaccggcacctcctcc 55729
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>gb|AF013262.1|AF013262 Mus musculus lumican (Ldc) gene, complete cds
          Length = 7064

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 214 gccactaccaccagcagcag 233
           ||||||||||||||||||||
Sbjct: 600 gccactaccaccagcagcag 619
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 155     acctccaccggcacctcctc 174
               ||||||||||||||||||||
Sbjct: 1983460 acctccaccggcacctcctc 1983479
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>gb|AC004780.1|AC004780 Homo sapiens chromosome 19, cosmid F17127, complete sequence
          Length = 37218

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 133   tctcctaccactccccttct 152
             ||||||||||||||||||||
Sbjct: 18511 tctcctaccactccccttct 18530
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>gb|AC122881.4| Mus musculus BAC clone RP23-79J21 from 13, complete sequence
          Length = 221931

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 139    accactccccttctncacctcca 161
              |||||||||||||| ||||||||
Sbjct: 201515 accactccccttctccacctcca 201493
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>emb|AL132712.4|CNS01DTD Human chromosome 14 DNA sequence BAC C-2134A5 of library CalTech-D from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 129043

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                             
Query: 46    ctgcccctcctttccctccctggctgcctcct 77
             ||||||||||||| ||||||| ||||||||||
Sbjct: 64357 ctgcccctcctttgcctccct-gctgcctcct 64327


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,505,265
Number of Sequences: 3902068
Number of extensions: 3505265
Number of successful extensions: 81654
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 81252
Number of HSP's gapped (non-prelim): 403
length of query: 463
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 441
effective length of database: 17,147,199,772
effective search space: 7561915099452
effective search space used: 7561915099452
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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