| Clone Name | basd26h23 |
|---|---|
| Clone Library Name | barley_pub |
>GLTB_MAIZE (P23225) Ferredoxin-dependent glutamate synthase, chloroplast| precursor (EC 1.4.7.1) (Fd-GOGAT) Length = 1616 Score = 390 bits (1001), Expect = e-108 Identities = 195/204 (95%), Positives = 201/204 (98%) Frame = +2 Query: 2 VLRDLVELKSERTPIPIGKVEPATSIVERFCTGGMSLGAISRETHEAIAIAMNRIGGKSN 181 VLRDL+ELKS+R PIPIGKVE ATSIVERFCTGGMSLGAISRETHEAIAIAMNRIGGKSN Sbjct: 934 VLRDLLELKSDRAPIPIGKVESATSIVERFCTGGMSLGAISRETHEAIAIAMNRIGGKSN 993 Query: 182 SGEGGEDPIRWSPLTDVVDGYSATLPHLKGLQNGDTATSAIKQVASGRFGVTPTFLVNAE 361 SGEGGEDPIRW+PLTDVVDGYS TLPHLKGLQNGDTATSAIKQVASGRFGVTPTFLVNA+ Sbjct: 994 SGEGGEDPIRWNPLTDVVDGYSPTLPHLKGLQNGDTATSAIKQVASGRFGVTPTFLVNAD 1053 Query: 362 QIEIKIAQGAKPGEGGQLPGKKVSAYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFD 541 QIEIKIAQGAKPGEGGQLPGKKVSAYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLI+D Sbjct: 1054 QIEIKIAQGAKPGEGGQLPGKKVSAYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIYD 1113 Query: 542 LHQINPKAKVSVKLVAEAGIGTVA 613 LHQINPKAKVSVKLV+EAGIGTVA Sbjct: 1114 LHQINPKAKVSVKLVSEAGIGTVA 1137
>GLTB_SPIOL (Q43155) Ferredoxin-dependent glutamate synthase, chloroplast (EC| 1.4.7.1) (Fd-GOGAT) Length = 1517 Score = 388 bits (997), Expect = e-108 Identities = 193/204 (94%), Positives = 200/204 (98%) Frame = +2 Query: 2 VLRDLVELKSERTPIPIGKVEPATSIVERFCTGGMSLGAISRETHEAIAIAMNRIGGKSN 181 VLRDL+E KS+R PI +GKVEPATSIVERFCTGGMSLGAISRETHEAIAIAMNR+GGKSN Sbjct: 837 VLRDLLEFKSDRAPISVGKVEPATSIVERFCTGGMSLGAISRETHEAIAIAMNRLGGKSN 896 Query: 182 SGEGGEDPIRWSPLTDVVDGYSATLPHLKGLQNGDTATSAIKQVASGRFGVTPTFLVNAE 361 SGEGGEDPIRW PLTDVVDGYS+TLPHLKGLQNGDTATSAIKQVASGRFGVTPTFLVNA+ Sbjct: 897 SGEGGEDPIRWRPLTDVVDGYSSTLPHLKGLQNGDTATSAIKQVASGRFGVTPTFLVNAD 956 Query: 362 QIEIKIAQGAKPGEGGQLPGKKVSAYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFD 541 QIEIKIAQGAKPGEGGQLPGKKVSAYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLI+D Sbjct: 957 QIEIKIAQGAKPGEGGQLPGKKVSAYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIYD 1016 Query: 542 LHQINPKAKVSVKLVAEAGIGTVA 613 LHQINPKAKVSVKLVAEAGIGTVA Sbjct: 1017 LHQINPKAKVSVKLVAEAGIGTVA 1040
>GLTB2_ARATH (Q9T0P4) Ferredoxin-dependent glutamate synthase 2, chloroplast| precursor (EC 1.4.7.1) (Fd-GOGAT 2) Length = 1629 Score = 382 bits (982), Expect = e-106 Identities = 186/204 (91%), Positives = 198/204 (97%) Frame = +2 Query: 2 VLRDLVELKSERTPIPIGKVEPATSIVERFCTGGMSLGAISRETHEAIAIAMNRIGGKSN 181 V RDL+E KS+R PIP+GKVEPA+SIVERFCTGGMSLGAISRETHE IAIAMNR+GGKSN Sbjct: 944 VFRDLLEFKSDRNPIPVGKVEPASSIVERFCTGGMSLGAISRETHETIAIAMNRLGGKSN 1003 Query: 182 SGEGGEDPIRWSPLTDVVDGYSATLPHLKGLQNGDTATSAIKQVASGRFGVTPTFLVNAE 361 SGEGGEDPIRW PLTDVVDGYS+TLPHLKGL+NGDTATSAIKQVASGRFGVTPTFLVNA+ Sbjct: 1004 SGEGGEDPIRWKPLTDVVDGYSSTLPHLKGLRNGDTATSAIKQVASGRFGVTPTFLVNAD 1063 Query: 362 QIEIKIAQGAKPGEGGQLPGKKVSAYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFD 541 Q+EIK+AQGAKPGEGGQLPGKKVSAYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFD Sbjct: 1064 QLEIKVAQGAKPGEGGQLPGKKVSAYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFD 1123 Query: 542 LHQINPKAKVSVKLVAEAGIGTVA 613 LHQ+NPKAKVSVKLV+E GIGTVA Sbjct: 1124 LHQVNPKAKVSVKLVSETGIGTVA 1147
>GLTB1_ARATH (Q9ZNZ7) Ferredoxin-dependent glutamate synthase 1, chloroplast| precursor (EC 1.4.7.1) (Fd-GOGAT 1) Length = 1648 Score = 381 bits (979), Expect = e-106 Identities = 188/204 (92%), Positives = 197/204 (96%) Frame = +2 Query: 2 VLRDLVELKSERTPIPIGKVEPATSIVERFCTGGMSLGAISRETHEAIAIAMNRIGGKSN 181 VLRDL+E KS+R PIP+GKVEPA +IV+RFCTGGMSLGAISRETHEAIAIAMNRIGGKSN Sbjct: 968 VLRDLLEFKSDRAPIPVGKVEPAVAIVQRFCTGGMSLGAISRETHEAIAIAMNRIGGKSN 1027 Query: 182 SGEGGEDPIRWSPLTDVVDGYSATLPHLKGLQNGDTATSAIKQVASGRFGVTPTFLVNAE 361 SGEGGEDPIRW PLTDVVDGYS TLPHLKGLQNGD ATSAIKQVASGRFGVTPTFLVNA+ Sbjct: 1028 SGEGGEDPIRWKPLTDVVDGYSPTLPHLKGLQNGDIATSAIKQVASGRFGVTPTFLVNAD 1087 Query: 362 QIEIKIAQGAKPGEGGQLPGKKVSAYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFD 541 Q+EIK+AQGAKPGEGGQLPGKKVSAYIARLR+SKPGVPLISPPPHHDIYSIEDLAQLIFD Sbjct: 1088 QLEIKVAQGAKPGEGGQLPGKKVSAYIARLRSSKPGVPLISPPPHHDIYSIEDLAQLIFD 1147 Query: 542 LHQINPKAKVSVKLVAEAGIGTVA 613 LHQINP AKVSVKLVAEAGIGTVA Sbjct: 1148 LHQINPNAKVSVKLVAEAGIGTVA 1171
>GLTB_PORPU (P51375) Ferredoxin-dependent glutamate synthase (EC 1.4.7.1)| (Fd-GOGAT) Length = 1538 Score = 318 bits (814), Expect = 1e-86 Identities = 157/204 (76%), Positives = 180/204 (88%), Gaps = 1/204 (0%) Frame = +2 Query: 5 LRDLVELKSERTPIPIGKVEPATSIVERFCTGGMSLGAISRETHEAIAIAMNRIGGKSNS 184 LRDL++LKS + PI I KVE +I+ +FCTGGMSLGA+SRETHE +AIAMNRIGGKSNS Sbjct: 867 LRDLLKLKSNKQPIAIDKVESMENILHKFCTGGMSLGALSRETHETLAIAMNRIGGKSNS 926 Query: 185 GEGGEDPIRWSPLTDVVD-GYSATLPHLKGLQNGDTATSAIKQVASGRFGVTPTFLVNAE 361 GEGGEDP+R+ L DV + G S LPHLKGL+NGDTA+SAIKQ+ASGRFGVTP +L+NA+ Sbjct: 927 GEGGEDPVRFKVLNDVNESGNSDLLPHLKGLRNGDTASSAIKQIASGRFGVTPEYLMNAK 986 Query: 362 QIEIKIAQGAKPGEGGQLPGKKVSAYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFD 541 Q+EIKIAQGAKPGEGGQLPGKK+S YIA LR KPGVPLISPPPHHDIYSIEDL+QLIFD Sbjct: 987 QLEIKIAQGAKPGEGGQLPGKKISPYIATLRKCKPGVPLISPPPHHDIYSIEDLSQLIFD 1046 Query: 542 LHQINPKAKVSVKLVAEAGIGTVA 613 LHQINP AK+SVKLV+E GIGT+A Sbjct: 1047 LHQINPTAKISVKLVSEIGIGTIA 1070
>GLTB_ANTSP (Q06434) Ferredoxin-dependent glutamate synthase (EC 1.4.7.1)| (Fd-GOGAT) Length = 1536 Score = 303 bits (776), Expect = 3e-82 Identities = 153/204 (75%), Positives = 172/204 (84%), Gaps = 1/204 (0%) Frame = +2 Query: 5 LRDLVELKSERTPIPIGKVEPATSIVERFCTGGMSLGAISRETHEAIAIAMNRIGGKSNS 184 LRDL+ELK++R PI I +VE S++ RFCTGGMSLGA+SRETHE +AI MNRIGGKSNS Sbjct: 863 LRDLLELKTDRQPISIDQVEDVNSVLMRFCTGGMSLGALSRETHETLAIRMNRIGGKSNS 922 Query: 185 GEGGEDPIRWSPLTDV-VDGYSATLPHLKGLQNGDTATSAIKQVASGRFGVTPTFLVNAE 361 GEGGED R+ + D+ G S T HLKGL+ D A+SAIKQ+ASGRFGVTP +LVNA+ Sbjct: 923 GEGGEDSTRFKSIQDLDTSGVSRTFSHLKGLKINDLASSAIKQIASGRFGVTPEYLVNAK 982 Query: 362 QIEIKIAQGAKPGEGGQLPGKKVSAYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFD 541 Q+EIKIAQGAKPGEGGQLPGKKVS YIA LRN KPGV LISPPPHHDIYSIEDLAQLIFD Sbjct: 983 QLEIKIAQGAKPGEGGQLPGKKVSPYIAELRNCKPGVTLISPPPHHDIYSIEDLAQLIFD 1042 Query: 542 LHQINPKAKVSVKLVAEAGIGTVA 613 LHQINP A+VSVKLVA GIGT+A Sbjct: 1043 LHQINPDAQVSVKLVASLGIGTIA 1066
>GLTS_SYNY3 (P55038) Ferredoxin-dependent glutamate synthase 2 (EC 1.4.7.1)| (FD-GOGAT) Length = 1556 Score = 301 bits (770), Expect = 1e-81 Identities = 150/204 (73%), Positives = 175/204 (85%), Gaps = 1/204 (0%) Frame = +2 Query: 5 LRDLVELKSERTPIPIGKVEPATSIVERFCTGGMSLGAISRETHEAIAIAMNRIGGKSNS 184 LRDL++ +++ I + +VE SIV+RFCTGGMSLGA+SRE HE +AIAMNR+G KSNS Sbjct: 878 LRDLLDFNADQPAISLEEVESVESIVKRFCTGGMSLGALSREAHETLAIAMNRLGAKSNS 937 Query: 185 GEGGEDPIRWSPLTDV-VDGYSATLPHLKGLQNGDTATSAIKQVASGRFGVTPTFLVNAE 361 GEGGED +R+ L DV +G S TLPHL GLQNGDTA SAIKQ+ASGRFGVTP +L++ + Sbjct: 938 GEGGEDVVRYLTLDDVDSEGNSPTLPHLHGLQNGDTANSAIKQIASGRFGVTPEYLMSGK 997 Query: 362 QIEIKIAQGAKPGEGGQLPGKKVSAYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFD 541 Q+EIK+AQGAKPGEGGQLPGKKVS YIA LR SKPGV LISPPPHHDIYSIEDLAQLI+D Sbjct: 998 QLEIKMAQGAKPGEGGQLPGKKVSEYIAMLRRSKPGVTLISPPPHHDIYSIEDLAQLIYD 1057 Query: 542 LHQINPKAKVSVKLVAEAGIGTVA 613 LHQINP+A+VSVKLVAE GIGT+A Sbjct: 1058 LHQINPEAQVSVKLVAEIGIGTIA 1081
>GLTB_CYACA (O19906) Ferredoxin-dependent glutamate synthase (EC 1.4.7.1)| (Fd-GOGAT) Length = 1549 Score = 298 bits (764), Expect = 6e-81 Identities = 147/204 (72%), Positives = 173/204 (84%), Gaps = 1/204 (0%) Frame = +2 Query: 5 LRDLVELKSERTPIPIGKVEPATSIVERFCTGGMSLGAISRETHEAIAIAMNRIGGKSNS 184 +RDL+E +P+ KVE I +RFCTGGMSLGA+SRE HE ++IAMNRIGGKSNS Sbjct: 874 IRDLLEFNFRSCSVPLEKVENIFEITKRFCTGGMSLGALSREAHETLSIAMNRIGGKSNS 933 Query: 185 GEGGEDPIRWSPLTDVVD-GYSATLPHLKGLQNGDTATSAIKQVASGRFGVTPTFLVNAE 361 GEGGED +R++ LTDV + G S + PHLKGL+NGD+ +SAIKQ+ASGRFGVTP +LVNA+ Sbjct: 934 GEGGEDSLRFTVLTDVDETGNSPSFPHLKGLKNGDSLSSAIKQIASGRFGVTPEYLVNAK 993 Query: 362 QIEIKIAQGAKPGEGGQLPGKKVSAYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFD 541 Q+EIKI+QGAKPGEGGQLPGKKVS YIA LR KPGV LISPPPHHDIYSIEDLAQLIFD Sbjct: 994 QLEIKISQGAKPGEGGQLPGKKVSPYIATLRACKPGVTLISPPPHHDIYSIEDLAQLIFD 1053 Query: 542 LHQINPKAKVSVKLVAEAGIGTVA 613 LHQ+NP+ KVSVKLV+E G+GT+A Sbjct: 1054 LHQVNPECKVSVKLVSEIGVGTIA 1077
>GLTB_AZOBR (Q05755) Glutamate synthase [NADPH] large chain precursor (EC| 1.4.1.13) (Glutamate synthase alpha subunit) (NADPH-GOGAT) (GLTS alpha chain) Length = 1515 Score = 243 bits (620), Expect = 3e-64 Identities = 126/203 (62%), Positives = 152/203 (74%) Frame = +2 Query: 5 LRDLVELKSERTPIPIGKVEPATSIVERFCTGGMSLGAISRETHEAIAIAMNRIGGKSNS 184 LRDL+EL+S + P+P+ +VE T+I +RF T GMS+GA+S E H + +AMNRIG KS+S Sbjct: 861 LRDLLELRSTKAPVPVDEVESITAIRKRFITPGMSMGALSPEAHGTLNVAMNRIGAKSDS 920 Query: 185 GEGGEDPIRWSPLTDVVDGYSATLPHLKGLQNGDTATSAIKQVASGRFGVTPTFLVNAEQ 364 GEGGEDP R+ P +NGD SAIKQVASGRFGVT +L + Sbjct: 921 GEGGEDPARFRPD-----------------KNGDNWNSAIKQVASGRFGVTAEYLNQCRE 963 Query: 365 IEIKIAQGAKPGEGGQLPGKKVSAYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFDL 544 +EIK+AQGAKPGEGGQLPG KV+ IARLR+S PGV LISPPPHHDIYSIEDLAQLI+DL Sbjct: 964 LEIKVAQGAKPGEGGQLPGFKVTEMIARLRHSTPGVMLISPPPHHDIYSIEDLAQLIYDL 1023 Query: 545 HQINPKAKVSVKLVAEAGIGTVA 613 QINP AKV+VKLV+ +GIGT+A Sbjct: 1024 KQINPDAKVTVKLVSRSGIGTIA 1046
>GLTB_ECOLI (P09831) Glutamate synthase [NADPH] large chain precursor (EC| 1.4.1.13) (Glutamate synthase alpha subunit) (NADPH-GOGAT) (GLTS alpha chain) Length = 1517 Score = 238 bits (607), Expect = 1e-62 Identities = 124/203 (61%), Positives = 145/203 (71%) Frame = +2 Query: 5 LRDLVELKSERTPIPIGKVEPATSIVERFCTGGMSLGAISRETHEAIAIAMNRIGGKSNS 184 LRDL+ + + I VEPA+ + +RF T MS+GA+S E HEA+A AMN IGG SNS Sbjct: 861 LRDLLAITPGENAVNIADVEPASELFKRFDTAAMSIGALSPEAHEALAEAMNSIGGNSNS 920 Query: 185 GEGGEDPIRWSPLTDVVDGYSATLPHLKGLQNGDTATSAIKQVASGRFGVTPTFLVNAEQ 364 GEGGEDP R+ G S IKQVASGRFGVTP +LVNA+ Sbjct: 921 GEGGEDPARY----------------------GTNKVSRIKQVASGRFGVTPAYLVNADV 958 Query: 365 IEIKIAQGAKPGEGGQLPGKKVSAYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFDL 544 I+IK+AQGAKPGEGGQLPG KV+ YIA+LR S PGV LISPPPHHDIYSIEDLAQLIFDL Sbjct: 959 IQIKVAQGAKPGEGGQLPGDKVTPYIAKLRYSVPGVTLISPPPHHDIYSIEDLAQLIFDL 1018 Query: 545 HQINPKAKVSVKLVAEAGIGTVA 613 Q+NPKA +SVKLV+E G+GT+A Sbjct: 1019 KQVNPKAMISVKLVSEPGVGTIA 1041
>GLTA_BACSU (P39812) Glutamate synthase [NADPH] large chain (EC 1.4.1.13)| (NADPH-GOGAT) Length = 1520 Score = 234 bits (597), Expect = 1e-61 Identities = 121/203 (59%), Positives = 149/203 (73%) Frame = +2 Query: 5 LRDLVELKSERTPIPIGKVEPATSIVERFCTGGMSLGAISRETHEAIAIAMNRIGGKSNS 184 LR+L R P+ + +VE A SIV+RF TG MS G++S+E HEA+AIAMNR+GGKSNS Sbjct: 836 LRNLFAFDGNRKPLKLEEVESAESIVKRFKTGAMSFGSLSKEAHEALAIAMNRLGGKSNS 895 Query: 185 GEGGEDPIRWSPLTDVVDGYSATLPHLKGLQNGDTATSAIKQVASGRFGVTPTFLVNAEQ 364 GEGGEDP R+ P +NGD SAIKQ+ASGRFGV +LVNA++ Sbjct: 896 GEGGEDPKRFVPD-----------------ENGDDRRSAIKQIASGRFGVKSHYLVNADE 938 Query: 365 IEIKIAQGAKPGEGGQLPGKKVSAYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFDL 544 ++IK+AQGAKPGEGGQLPG KV ++A +R S PGV LISPPPHHDIYSIEDLAQLI DL Sbjct: 939 LQIKMAQGAKPGEGGQLPGNKVYPWVADVRGSTPGVGLISPPPHHDIYSIEDLAQLIHDL 998 Query: 545 HQINPKAKVSVKLVAEAGIGTVA 613 N A++SVKLV++AG+GT+A Sbjct: 999 KNANRDARISVKLVSKAGVGTIA 1021
>GLTB_SYNY3 (P55037) Ferredoxin-dependent glutamate synthase 1 (EC 1.4.7.1)| (Fd-GOGAT) Length = 1550 Score = 231 bits (589), Expect = 1e-60 Identities = 120/203 (59%), Positives = 154/203 (75%) Frame = +2 Query: 5 LRDLVELKSERTPIPIGKVEPATSIVERFCTGGMSLGAISRETHEAIAIAMNRIGGKSNS 184 LR L++ + +R IP+ +VEP +I++RF TG MS G+IS+E HE++AIAMNRIGGKSN+ Sbjct: 873 LRGLLDFQ-DRESIPLEEVEPIEAIMKRFKTGAMSYGSISKEAHESLAIAMNRIGGKSNT 931 Query: 185 GEGGEDPIRWSPLTDVVDGYSATLPHLKGLQNGDTATSAIKQVASGRFGVTPTFLVNAEQ 364 GEGGEDP R++ D GD+ SAIKQVASGRFGVT +L A++ Sbjct: 932 GEGGEDPERFTWTND----------------QGDSKNSAIKQVASGRFGVTSLYLSQAKE 975 Query: 365 IEIKIAQGAKPGEGGQLPGKKVSAYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFDL 544 I+IK+AQGAKPGEGGQLPGKKV +IA++R+S PGV LISPPPHHDIYSIEDLA+LI DL Sbjct: 976 IQIKMAQGAKPGEGGQLPGKKVYPWIAKVRHSTPGVGLISPPPHHDIYSIEDLAELIHDL 1035 Query: 545 HQINPKAKVSVKLVAEAGIGTVA 613 N +A+++VKLV+E G+GT+A Sbjct: 1036 KNANREARINVKLVSEVGVGTIA 1058
>GLSN_MEDSA (Q03460) Glutamate synthase [NADH], chloroplast precursor (EC| 1.4.1.14) (NADH-GOGAT) Length = 2194 Score = 231 bits (588), Expect = 2e-60 Identities = 122/203 (60%), Positives = 146/203 (71%) Frame = +2 Query: 5 LRDLVELKSERTPIPIGKVEPATSIVERFCTGGMSLGAISRETHEAIAIAMNRIGGKSNS 184 LR L++ K + +PI +VEPA+ IV+RFCTG MS G+IS E H A+A AMN IGGKSN+ Sbjct: 967 LRGLLKFKDAASKVPISEVEPASEIVKRFCTGAMSYGSISLEAHTALATAMNTIGGKSNT 1026 Query: 185 GEGGEDPIRWSPLTDVVDGYSATLPHLKGLQNGDTATSAIKQVASGRFGVTPTFLVNAEQ 364 GEGGE P R PL D G +N SAIKQVASGRFGV+ +L NA++ Sbjct: 1027 GEGGEQPSRMEPLAD-------------GSRN--PKRSAIKQVASGRFGVSSYYLTNADE 1071 Query: 365 IEIKIAQGAKPGEGGQLPGKKVSAYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFDL 544 ++IK+AQGAKPGEGG+LPG KV IA RNS GV LISPPPHHDIYSIEDLAQLI DL Sbjct: 1072 LQIKMAQGAKPGEGGELPGHKVIGDIAITRNSTAGVGLISPPPHHDIYSIEDLAQLIHDL 1131 Query: 545 HQINPKAKVSVKLVAEAGIGTVA 613 NP A++SVKLV+EAG+G +A Sbjct: 1132 KNANPAARISVKLVSEAGVGVIA 1154
>GLT1_SCHPO (Q9C102) Putative glutamate synthase [NADPH] (EC 1.4.1.13)| (NADPH-GOGAT) Length = 2111 Score = 231 bits (588), Expect = 2e-60 Identities = 118/190 (62%), Positives = 143/190 (75%) Frame = +2 Query: 44 IPIGKVEPATSIVERFCTGGMSLGAISRETHEAIAIAMNRIGGKSNSGEGGEDPIRWSPL 223 IPI +VEP T IV RFCTG MS G+IS E+H ++AIAMNR+GGKSN+GEGGEDP R Sbjct: 928 IPIEQVEPWTEIVRRFCTGAMSYGSISMESHSSLAIAMNRLGGKSNTGEGGEDPAR---- 983 Query: 224 TDVVDGYSATLPHLKGLQNGDTATSAIKQVASGRFGVTPTFLVNAEQIEIKIAQGAKPGE 403 + L NGDT SAIKQ+ASGRFGVT +L +A++++IK+AQGAKPGE Sbjct: 984 -------------SQRLANGDTMRSAIKQIASGRFGVTSWYLSDADELQIKMAQGAKPGE 1030 Query: 404 GGQLPGKKVSAYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFDLHQINPKAKVSVKL 583 GG+LPG KVS IA+ R+S GV LISPPPHHDIYSIEDL QLI+D+ NP+A+VSVKL Sbjct: 1031 GGELPGNKVSESIAKTRHSTAGVGLISPPPHHDIYSIEDLKQLIYDMKSANPRARVSVKL 1090 Query: 584 VAEAGIGTVA 613 V+E G+G VA Sbjct: 1091 VSEVGVGIVA 1100
>GLT1_YEAST (Q12680) Glutamate synthase [NADPH] precursor (EC 1.4.1.13)| (NADPH-GOGAT) Length = 2144 Score = 214 bits (546), Expect = 1e-55 Identities = 120/204 (58%), Positives = 142/204 (69%), Gaps = 1/204 (0%) Frame = +2 Query: 5 LRDLVELKSERT-PIPIGKVEPATSIVERFCTGGMSLGAISRETHEAIAIAMNRIGGKSN 181 LR L+EL E + IP+ +VEP T I RF +G MS G+IS E H +AIAMNR+G KSN Sbjct: 906 LRGLLELDFENSVSIPLEQVEPWTEIARRFASGAMSYGSISMEAHSTLAIAMNRLGAKSN 965 Query: 182 SGEGGEDPIRWSPLTDVVDGYSATLPHLKGLQNGDTATSAIKQVASGRFGVTPTFLVNAE 361 GEGGED R SA +NGDT SAIKQVAS RFGVT +L +A+ Sbjct: 966 CGEGGEDAER-----------SAVQ------ENGDTMRSAIKQVASARFGVTSYYLSDAD 1008 Query: 362 QIEIKIAQGAKPGEGGQLPGKKVSAYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFD 541 +I+IKIAQGAKPGEGG+LP KVS IA+ R+S P V LISPPPHHDIYSIEDL QLI+D Sbjct: 1009 EIQIKIAQGAKPGEGGELPAHKVSKDIAKTRHSTPNVGLISPPPHHDIYSIEDLKQLIYD 1068 Query: 542 LHQINPKAKVSVKLVAEAGIGTVA 613 L NP+A +SVKLV+E G+G VA Sbjct: 1069 LKCANPRAGISVKLVSEVGVGIVA 1092
>GLUS_METJA (Q58746) Glutamate synthase (EC 1.4.1.13)| Length = 510 Score = 109 bits (273), Expect = 6e-24 Identities = 74/179 (41%), Positives = 89/179 (49%), Gaps = 1/179 (0%) Frame = +2 Query: 56 KVEPATSIVERFCTGGMSLGAISRETHEAIAIAMNRIGGKSNSGEGGEDPIRWSPLTDVV 235 K+ P + MS GA+S H + A A+ G +GEGG Sbjct: 167 KIAPNLKLDTPIMIAHMSYGALSLNAHLSFAKAVKECGTFMGTGEGGLP----------- 215 Query: 236 DGYSATLPHLKGLQNGDTATSAIKQVASGRFGVTPTFLVNAEQIEIKIAQGAKPGEGGQL 415 A P+ A I QVASGRFGV +L+ IEIKI QGAKPG GG L Sbjct: 216 ---KALYPY---------ADHIITQVASGRFGVNEEYLMKGSAIEIKIGQGAKPGIGGHL 263 Query: 416 PGKKVSAYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFDLHQINP-KAKVSVKLVA 589 PG+KV+A I+ R G ISP PHHDIYSIEDLAQL+ L + K V VK+ A Sbjct: 264 PGEKVTAEISATRMIPEGSDAISPAPHHDIYSIEDLAQLVRSLKEATRWKKPVFVKIAA 322
>GLXD_RHIME (O87392) Glutamate synthase large subunit-like protein| Length = 442 Score = 74.3 bits (181), Expect = 3e-13 Identities = 50/151 (33%), Positives = 71/151 (47%) Frame = +2 Query: 101 GMSLGAISRETHEAIAIAMNRIGGKSNSGEGGEDPIRWSPLTDVVDGYSATLPHLKGLQN 280 GMS GA+S EA+ G + +G+GG +TD G+S TL Sbjct: 94 GMSFGALSGPAKEALGRGATASGTSTTTGDGG--------MTDEERGHSQTL-------- 137 Query: 281 GDTATSAIKQVASGRFGVTPTFLVNAEQIEIKIAQGAKPGEGGQLPGKKVSAYIARLRNS 460 + Q R+G+ P L A+ IE+ + QGAKPG GG L G+K+S +A +RN Sbjct: 138 -------VYQYLPSRYGMNPKDLRRADAIEVVVGQGAKPGGGGMLLGQKISDRVANMRNL 190 Query: 461 KPGVPLISPPPHHDIYSIEDLAQLIFDLHQI 553 G+ S H D +DL I +L +I Sbjct: 191 PKGIDQRSACRHPDWTGPDDLEIKILELREI 221
>ENV_VILV1 (P23422) Env polyprotein (Coat polyprotein) [Contains: Leader| peptide; Exterior membrane glycoprotein; Transmembrane glycoprotein] Length = 989 Score = 32.0 bits (71), Expect = 1.5 Identities = 29/104 (27%), Positives = 42/104 (40%), Gaps = 4/104 (3%) Frame = -2 Query: 337 CNTKTSRRNLLNGTCGGVPVLKTFEMRKCRRISINNICKGTPADWVLTTFS*IRFSTYPI 158 CN S +L N T GG+ V+ CR+ S GT +W + + I Sbjct: 490 CNCTRSGNHLYNSTSGGLLVI------ICRQNSTITGIMGTNTNWT---------TMWNI 534 Query: 157 HCNC----NSFMGFSGNSAQGHSTCAKTLNDRGCRLNFANRNRR 38 + NC NS + +GN G T+ND C L N + + Sbjct: 535 YQNCSKCNNSSLDRTGNGTLG------TVNDLKCSLPHRNESNK 572
>LPXK_MANSM (Q65U20) Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) (Lipid A| 4'-kinase) Length = 325 Score = 31.2 bits (69), Expect = 2.5 Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 11/81 (13%) Frame = +2 Query: 23 LKSERTPIPI-----------GKVEPATSIVERFCTGGMSLGAISRETHEAIAIAMNRIG 169 +KS R P+PI GK +V+ G+ +G ISR A+ + Sbjct: 37 IKSYRAPVPIVIVGNLSVGGNGKTPVVIWLVKALQQNGLRVGVISRGYGSQSAVYPLLVT 96 Query: 170 GKSNSGEGGEDPIRWSPLTDV 232 K++ EGG++P+ + T V Sbjct: 97 EKTDPLEGGDEPVLIAQRTQV 117
>Y676_METJA (Q58089) Putative hydrogenase expression/formation protein MJ0676| Length = 335 Score = 30.0 bits (66), Expect = 5.6 Identities = 14/43 (32%), Positives = 22/43 (51%) Frame = +2 Query: 59 VEPATSIVERFCTGGMSLGAISRETHEAIAIAMNRIGGKSNSG 187 V P ++ER G+ + A+ T +A A+N + KSN G Sbjct: 198 VAPINKLIERVLEEGIQINAMKDPTRGGLADALNEMAEKSNIG 240
>LALBA_SHEEP (P09462) Alpha-lactalbumin precursor (Lactose synthase B protein)| Length = 142 Score = 29.6 bits (65), Expect = 7.3 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 2/58 (3%) Frame = -2 Query: 460 GVSQPSYVCTDFFPWKLTPFTRLSPLCNLYLNLFSIN*KCWC--NTKTSRRNLLNGTC 293 GVS P +VCT F + + LF IN K WC + RN+ N +C Sbjct: 39 GVSLPEWVCTAFHTSGYDTQAIVQNNDSTEYGLFQINNKIWCKDDQNPHSRNICNISC 96
>LALBA_CAPHI (P00712) Alpha-lactalbumin precursor (Lactose synthase B protein)| Length = 142 Score = 29.6 bits (65), Expect = 7.3 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 2/58 (3%) Frame = -2 Query: 460 GVSQPSYVCTDFFPWKLTPFTRLSPLCNLYLNLFSIN*KCWC--NTKTSRRNLLNGTC 293 GVS P +VCT F + + LF IN K WC + RN+ N +C Sbjct: 39 GVSLPEWVCTAFHTSGYDTQAIVQNNDSTEYGLFQINNKIWCKDDQNPHSRNICNISC 96
>OAR_MYXXA (P38370) Protein oar precursor| Length = 1061 Score = 29.6 bits (65), Expect = 7.3 Identities = 33/139 (23%), Positives = 51/139 (36%), Gaps = 1/139 (0%) Frame = +2 Query: 5 LRDLVELKSERTPIPIGKVEPATSIVERFCTGGMSLGA-ISRETHEAIAIAMNRIGGKSN 181 L + + E P +G+V G ++G + +E + IA+A R GGK Sbjct: 101 LNRTIRVNVELLPEALGEVVEIVGAPPTIDVGSTTMGVNVDQEFIKRIAVA--RPGGKGG 158 Query: 182 SGEGGEDPIRWSPLTDVVDGYSATLPHLKGLQNGDTATSAIKQVASGRFGVTPTFLVNAE 361 + E +P D Y ++ +NG V G P F VNA Sbjct: 159 ATRSFESLAELAPGAQN-DNYGVSINGSTSPENG--------YVVDGLSTNDPAFGVNAS 209 Query: 362 QIEIKIAQGAKPGEGGQLP 418 + I+ Q GG +P Sbjct: 210 PLSIEFVQDVNIITGGYMP 228
>CHEB3_VIBCH (Q9KS59) Chemotaxis response regulator protein-glutamate| methylesterase of group 3 operon (EC 3.1.1.61) Length = 358 Score = 29.6 bits (65), Expect = 7.3 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = +1 Query: 415 SREKSQCIHSSVEKLQTWRSSHIPTTTPRHLFY 513 ++E + C+ S+ + R HIPT TP HL Y Sbjct: 308 AQEPTTCVVPSMPEALLKRVPHIPTGTPEHLAY 340
>ENV_VILV2 (P23423) Env polyprotein (Coat polyprotein) [Contains: Leader| peptide; Exterior membrane glycoprotein; Transmembrane glycoprotein] Length = 991 Score = 29.6 bits (65), Expect = 7.3 Identities = 28/104 (26%), Positives = 41/104 (39%), Gaps = 4/104 (3%) Frame = -2 Query: 337 CNTKTSRRNLLNGTCGGVPVLKTFEMRKCRRISINNICKGTPADWVLTTFS*IRFSTYPI 158 CN S +L N T GG+ V+ CR+ S GT +W + + I Sbjct: 490 CNCTRSGNHLYNSTSGGLLVI------ICRQNSTITGIMGTNTNWT---------TMWNI 534 Query: 157 HCNC----NSFMGFSGNSAQGHSTCAKTLNDRGCRLNFANRNRR 38 + NC NS + +G G T+ND C L N + + Sbjct: 535 YQNCSKCNNSSLDRTGKGTLG------TVNDLKCSLPHRNESNK 572
>MUTS_NITEU (Q82U08) DNA mismatch repair protein mutS| Length = 873 Score = 29.6 bits (65), Expect = 7.3 Identities = 15/45 (33%), Positives = 23/45 (51%) Frame = +2 Query: 44 IPIGKVEPATSIVERFCTGGMSLGAISRETHEAIAIAMNRIGGKS 178 I G+ + VE + + LGAI+RE + + I +GGKS Sbjct: 591 IEAGRHPVVENQVEHYIANDVQLGAITRENRQMLVITGPNMGGKS 635
>UVRB_GLOVI (Q7NJH7) UvrABC system protein B (Protein uvrB) (Excinuclease ABC| subunit B) Length = 680 Score = 29.3 bits (64), Expect = 9.6 Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 18/91 (19%) Frame = +2 Query: 230 VVDGYSATLPHLKGLQNGDTATSAI--------KQVASGRFGVTPTFLVNAEQI------ 367 VVD T+P ++G+ NGD + A R P F Q Sbjct: 336 VVDESHVTIPQIRGMYNGDAQRKKVLIDHGFRLPSAADNRPLKAPEFWDKVRQAIFVSAT 395 Query: 368 ----EIKIAQGAKPGEGGQLPGKKVSAYIAR 448 E++++ G + E G++ G+ V+ I R Sbjct: 396 PGDWEVELSGGGRDPETGRMAGEHVAEQIIR 426
>FINC_MOUSE (P11276) Fibronectin precursor (FN)| Length = 2477 Score = 29.3 bits (64), Expect = 9.6 Identities = 16/46 (34%), Positives = 20/46 (43%) Frame = +2 Query: 206 IRWSPLTDVVDGYSATLPHLKGLQNGDTATSAIKQVASGRFGVTPT 343 +RW P T V GY T GL T T++ Q G+ PT Sbjct: 1650 VRWLPSTSPVTGYRVTTTPKNGLGPSKTKTASPDQTEMTIEGLQPT 1695
>G11A_ORYSA (P47997) Protein kinase G11A (EC 2.7.11.1)| Length = 589 Score = 29.3 bits (64), Expect = 9.6 Identities = 29/94 (30%), Positives = 39/94 (41%), Gaps = 10/94 (10%) Frame = +2 Query: 11 DLVELKSERTPIPIGKVEPATSIVERFCTGGM--SLGAISRETHEAIAIAMNRIGGKSNS 184 D E+K+E +P + +VE G S A+ +E A A R+ G+S + Sbjct: 77 DPAEVKAEGNLVPKRLADEEKGVVEDGIANGSLKSSSALGKEHGIASASGSARLVGRSET 136 Query: 185 GEGGEDPIRWSPLT--DVVDG------YSATLPH 262 GE G R P T DV D S T PH Sbjct: 137 GERGFSSSRCRPSTSSDVSDESACSSISSVTKPH 170 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 88,097,146 Number of Sequences: 219361 Number of extensions: 1887650 Number of successful extensions: 5329 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 5126 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5311 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5538924943 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)