ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | basd26h19 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK063986.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-D10, full insert sequence Length = 1907 Score = 652 bits (329), Expect = 0.0 Identities = 542/613 (88%) Strand = Plus / Plus Query: 59 tctccggcgatctacaggagtagatcggccccggagacccctcgccccggccatggcgac 118 |||||||||||||||||| |||||||| |||||||| | || ||||||||||||| Sbjct: 100 tctccggcgatctacaggtgtagatcgcttccggagacatccaaccgcggccatggcgac 159 Query: 119 cttcgcgaagcccgagaacgcgctcaagagagcggaggagttgatacatgttggacaaaa 178 ||||||||| || ||||||||||||||||||||||||||||||||||||||||| || || Sbjct: 160 cttcgcgaaacctgagaacgcgctcaagagagcggaggagttgatacatgttgggcagaa 219 Query: 179 gcaggctgcgctgcaggcgctgcatgatctcattacatcaaagagatacagatcatggca 238 |||||| ||||| |||||| | ||||||||||| || ||||| |||||||| |||||||| Sbjct: 220 gcaggcagcgctacaggcgttacatgatctcatcacttcaaaaagatacaggtcatggca 279 Query: 239 aaagcctcttgagaagatcatgatgaagtatgtggagctgtgtgttgatctaaggaaggg 298 |||||| || || | ||| |||||||||||||||||||| ||||| || || |||||||| Sbjct: 280 aaagccactcgaaaggattatgatgaagtatgtggagctctgtgtagacctgaggaaggg 339 Query: 299 cagatttgccaaagatggccttattcagtacagaattgtctgccagcaagtcaacgtgtc 358 ||| ||||| ||||||||||||||||||||||| ||||||||||||||||| || ||||| Sbjct: 340 caggtttgcgaaagatggccttattcagtacaggattgtctgccagcaagtgaatgtgtc 399 Query: 359 atctctggaggaggtcataaaacactttatgcagctgtccaatgagaaagctgaggaagc 418 ||| |||||||||| ||||||||||| |||||||| |||||||||||||| ||| |||| Sbjct: 400 atccttggaggaggtgataaaacacttcatgcagctttccaatgagaaagcagagcaagc 459 Query: 419 caggaatcaggcacaagcactggaagatgctctggatgtcgaagatcttgaagctgacaa 478 ||||| ||||| ||||||||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 460 aaggaaccaggcgcaagcactggaagatgccctggatgtagaagatctggaagcagacaa 519 Query: 479 gcgtccggaggacttgatgctcagttatgttagcggagagaaaggcaaggaccgatcaga 538 ||| || ||||| ||||||||||| ||||| |||||||||||||| |||||||||||||| Sbjct: 520 gcggcctgaggatttgatgctcagctatgtcagcggagagaaagggaaggaccgatcaga 579 Query: 539 cagggagtttgttactccatggtttaagtttctgtgggagacatacaggacagtgctcga 598 ||| ||| ||| || |||||||| |||||||| ||||| |||||||| ||||| || || Sbjct: 580 cagagagcatgtcacaccatggttcaagtttctctgggaaacatacagaacagttcttga 639 Query: 599 gatactgagaaataattcaaagcttgaagcactatatgctatgactgcgcacaaggcttt 658 |||| ||||||| |||||||||||||||||| |||||||||||||||| ||||||||||| Sbjct: 640 gatattgagaaacaattcaaagcttgaagcattatatgctatgactgctcacaaggcttt 699 Query: 659 tcaattttgtaag 671 ||||||||||||| Sbjct: 700 tcaattttgtaag 712
>ref|XM_549952.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3419 Score = 644 bits (325), Expect = 0.0 Identities = 541/613 (88%) Strand = Plus / Plus Query: 59 tctccggcgatctacaggagtagatcggccccggagacccctcgccccggccatggcgac 118 |||||||||||||||||| |||||||| |||||||| | || ||||||||||||| Sbjct: 130 tctccggcgatctacaggtgtagatcgcttccggagacatccaaccgcggccatggcgac 189 Query: 119 cttcgcgaagcccgagaacgcgctcaagagagcggaggagttgatacatgttggacaaaa 178 ||||||||| || ||||||||||||||||||||||||||||||||||||||||| || || Sbjct: 190 cttcgcgaaacctgagaacgcgctcaagagagcggaggagttgatacatgttgggcagaa 249 Query: 179 gcaggctgcgctgcaggcgctgcatgatctcattacatcaaagagatacagatcatggca 238 |||||| ||||| |||||| | ||||||||||| || ||||| |||||||| |||||||| Sbjct: 250 gcaggcagcgctacaggcgttacatgatctcatcacttcaaaaagatacaggtcatggca 309 Query: 239 aaagcctcttgagaagatcatgatgaagtatgtggagctgtgtgttgatctaaggaaggg 298 |||||| || || | ||| |||||||||||||||||||| ||||| || || |||||||| Sbjct: 310 aaagccactcgaaaggattatgatgaagtatgtggagctctgtgtagacctgaggaaggg 369 Query: 299 cagatttgccaaagatggccttattcagtacagaattgtctgccagcaagtcaacgtgtc 358 ||| ||||| ||||||||||||||||||||||| ||||||||||||||||| || ||||| Sbjct: 370 caggtttgcgaaagatggccttattcagtacaggattgtctgccagcaagtgaatgtgtc 429 Query: 359 atctctggaggaggtcataaaacactttatgcagctgtccaatgagaaagctgaggaagc 418 ||| |||||||||| ||||||||||| |||||||| |||||||||||||| ||| |||| Sbjct: 430 atccttggaggaggtgataaaacacttcatgcagctttccaatgagaaagcagagcaagc 489 Query: 419 caggaatcaggcacaagcactggaagatgctctggatgtcgaagatcttgaagctgacaa 478 ||||| ||||| ||||||||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 490 aaggaaccaggcgcaagcactggaagatgccctggatgtagaagatctggaagcagacaa 549 Query: 479 gcgtccggaggacttgatgctcagttatgttagcggagagaaaggcaaggaccgatcaga 538 ||| || ||||| ||||||||||| ||||| ||||| |||||||| |||||||||||||| Sbjct: 550 gcggcctgaggatttgatgctcagctatgtcagcggggagaaagggaaggaccgatcaga 609 Query: 539 cagggagtttgttactccatggtttaagtttctgtgggagacatacaggacagtgctcga 598 ||| ||| ||| || |||||||| |||||||| ||||| |||||||| ||||| || || Sbjct: 610 cagagagcatgtcacaccatggttcaagtttctctgggaaacatacagaacagttcttga 669 Query: 599 gatactgagaaataattcaaagcttgaagcactatatgctatgactgcgcacaaggcttt 658 |||| ||||||| |||||||||||||||||| |||||||||||||||| ||||||||||| Sbjct: 670 gatattgagaaacaattcaaagcttgaagcattatatgctatgactgctcacaaggcttt 729 Query: 659 tcaattttgtaag 671 ||||||||||||| Sbjct: 730 tcaattttgtaag 742
>dbj|AK106560.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-110-B08, full insert sequence Length = 2691 Score = 644 bits (325), Expect = 0.0 Identities = 541/613 (88%) Strand = Plus / Plus Query: 59 tctccggcgatctacaggagtagatcggccccggagacccctcgccccggccatggcgac 118 |||||||||||||||||| |||||||| |||||||| | || ||||||||||||| Sbjct: 101 tctccggcgatctacaggtgtagatcgcttccggagacatccaaccgcggccatggcgac 160 Query: 119 cttcgcgaagcccgagaacgcgctcaagagagcggaggagttgatacatgttggacaaaa 178 ||||||||| || ||||||||||||||||||||||||||||||||||||||||| || || Sbjct: 161 cttcgcgaaacctgagaacgcgctcaagagagcggaggagttgatacatgttgggcagaa 220 Query: 179 gcaggctgcgctgcaggcgctgcatgatctcattacatcaaagagatacagatcatggca 238 |||||| ||||| |||||| | ||||||||||| || ||||| |||||||| |||||||| Sbjct: 221 gcaggcagcgctacaggcgttacatgatctcatcacttcaaaaagatacaggtcatggca 280 Query: 239 aaagcctcttgagaagatcatgatgaagtatgtggagctgtgtgttgatctaaggaaggg 298 |||||| || || | ||| |||||||||||||||||||| ||||| || || |||||||| Sbjct: 281 aaagccactcgaaaggattatgatgaagtatgtggagctctgtgtagacctgaggaaggg 340 Query: 299 cagatttgccaaagatggccttattcagtacagaattgtctgccagcaagtcaacgtgtc 358 ||| ||||| ||||||||||||||||||||||| ||||||||||||||||| || ||||| Sbjct: 341 caggtttgcgaaagatggccttattcagtacaggattgtctgccagcaagtgaatgtgtc 400 Query: 359 atctctggaggaggtcataaaacactttatgcagctgtccaatgagaaagctgaggaagc 418 ||| |||||||||| ||||||||||| |||||||| |||||||||||||| ||| |||| Sbjct: 401 atccttggaggaggtgataaaacacttcatgcagctttccaatgagaaagcagagcaagc 460 Query: 419 caggaatcaggcacaagcactggaagatgctctggatgtcgaagatcttgaagctgacaa 478 ||||| ||||| ||||||||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 461 aaggaaccaggcgcaagcactggaagatgccctggatgtagaagatctggaagcagacaa 520 Query: 479 gcgtccggaggacttgatgctcagttatgttagcggagagaaaggcaaggaccgatcaga 538 ||| || ||||| ||||||||||| ||||| ||||| |||||||| |||||||||||||| Sbjct: 521 gcggcctgaggatttgatgctcagctatgtcagcggggagaaagggaaggaccgatcaga 580 Query: 539 cagggagtttgttactccatggtttaagtttctgtgggagacatacaggacagtgctcga 598 ||| ||| ||| || |||||||| |||||||| ||||| |||||||| ||||| || || Sbjct: 581 cagagagcatgtcacaccatggttcaagtttctctgggaaacatacagaacagttcttga 640 Query: 599 gatactgagaaataattcaaagcttgaagcactatatgctatgactgcgcacaaggcttt 658 |||| ||||||| |||||||||||||||||| |||||||||||||||| ||||||||||| Sbjct: 641 gatattgagaaacaattcaaagcttgaagcattatatgctatgactgctcacaaggcttt 700 Query: 659 tcaattttgtaag 671 ||||||||||||| Sbjct: 701 tcaattttgtaag 713
>dbj|AK073457.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041I03, full insert sequence Length = 2175 Score = 644 bits (325), Expect = 0.0 Identities = 541/613 (88%) Strand = Plus / Plus Query: 59 tctccggcgatctacaggagtagatcggccccggagacccctcgccccggccatggcgac 118 |||||||||||||||||| |||||||| |||||||| | || ||||||||||||| Sbjct: 101 tctccggcgatctacaggtgtagatcgcttccggagacatccaaccgcggccatggcgac 160 Query: 119 cttcgcgaagcccgagaacgcgctcaagagagcggaggagttgatacatgttggacaaaa 178 ||||||||| || ||||||||||||||||||||||||||||||||||||||||| || || Sbjct: 161 cttcgcgaaacctgagaacgcgctcaagagagcggaggagttgatacatgttgggcagaa 220 Query: 179 gcaggctgcgctgcaggcgctgcatgatctcattacatcaaagagatacagatcatggca 238 |||||| ||||| |||||| | ||||||||||| || ||||| |||||||| |||||||| Sbjct: 221 gcaggcagcgctacaggcgttacatgatctcatcacttcaaaaagatacaggtcatggca 280 Query: 239 aaagcctcttgagaagatcatgatgaagtatgtggagctgtgtgttgatctaaggaaggg 298 |||||| || || | ||| |||||||||||||||||||| ||||| || || |||||||| Sbjct: 281 aaagccactcgaaaggattatgatgaagtatgtggagctctgtgtagacctgaggaaggg 340 Query: 299 cagatttgccaaagatggccttattcagtacagaattgtctgccagcaagtcaacgtgtc 358 ||| ||||| ||||||||||||||||||||||| ||||||||||||||||| || ||||| Sbjct: 341 caggtttgcgaaagatggccttattcagtacaggattgtctgccagcaagtgaatgtgtc 400 Query: 359 atctctggaggaggtcataaaacactttatgcagctgtccaatgagaaagctgaggaagc 418 ||| |||||||||| ||||||||||| |||||||| |||||||||||||| ||| |||| Sbjct: 401 atccttggaggaggtgataaaacacttcatgcagctttccaatgagaaagcagagcaagc 460 Query: 419 caggaatcaggcacaagcactggaagatgctctggatgtcgaagatcttgaagctgacaa 478 ||||| ||||| ||||||||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 461 aaggaaccaggcgcaagcactggaagatgccctggatgtagaagatctggaagcagacaa 520 Query: 479 gcgtccggaggacttgatgctcagttatgttagcggagagaaaggcaaggaccgatcaga 538 ||| || ||||| ||||||||||| ||||| ||||| |||||||| |||||||||||||| Sbjct: 521 gcggcctgaggatttgatgctcagctatgtcagcggggagaaagggaaggaccgatcaga 580 Query: 539 cagggagtttgttactccatggtttaagtttctgtgggagacatacaggacagtgctcga 598 ||| ||| ||| || |||||||| |||||||| ||||| |||||||| ||||| || || Sbjct: 581 cagagagcatgtcacaccatggttcaagtttctctgggaaacatacagaacagttcttga 640 Query: 599 gatactgagaaataattcaaagcttgaagcactatatgctatgactgcgcacaaggcttt 658 |||| ||||||| |||||||||||||||||| |||||||||||||||| ||||||||||| Sbjct: 641 gatattgagaaacaattcaaagcttgaagcattatatgctatgactgctcacaaggcttt 700 Query: 659 tcaattttgtaag 671 ||||||||||||| Sbjct: 701 tcaattttgtaag 713
>dbj|AK122166.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033147M02, full insert sequence Length = 3419 Score = 630 bits (318), Expect = e-177 Identities = 541/614 (88%), Gaps = 1/614 (0%) Strand = Plus / Plus Query: 59 tctccggcgatctacaggagtagatcggccccggagacccctcgccccggccatggcgac 118 |||||||||||||||||| |||||||| |||||||| | || ||||||||||||| Sbjct: 130 tctccggcgatctacaggtgtagatcgcttccggagacatccaaccgcggccatggcgac 189 Query: 119 cttcgcgaagcccgagaacgcgctcaagagagcggaggagttgatacatgttggacaaaa 178 ||||||||| || ||||||||||||||||||||||||||||||||||||||||| || || Sbjct: 190 cttcgcgaaacctgagaacgcgctcaagagagcggaggagttgatacatgttgggcagaa 249 Query: 179 gcaggctgcgctgcaggcgctgcatgatctcattacatcaaagagatacagatcatggca 238 |||||| ||||| |||||| | ||||||||||| || ||||| |||||||| |||||||| Sbjct: 250 gcaggcagcgctacaggcgttacatgatctcatcacttcaaaaagatacaggtcatggca 309 Query: 239 aaagcctcttgagaagatcatgatgaagtatgtggagctgtgtgttgatctaaggaaggg 298 |||||| || || | ||| |||||||||||||||||||| ||||| || || |||||||| Sbjct: 310 aaagccactcgaaaggattatgatgaagtatgtggagctctgtgtagacctgaggaaggg 369 Query: 299 cagatttgccaaagatggccttattcagtacagaattgtctgccagcaagtcaacgtgtc 358 ||| ||||| ||||||||||||||||||||||| ||||||||||||||||| || ||||| Sbjct: 370 caggtttgcgaaagatggccttattcagtacaggattgtctgccagcaagtgaatgtgtc 429 Query: 359 atctctggaggaggtcataaaacactttatgcagctgtccaatgagaaagctgaggaagc 418 ||| |||||||||| ||||||||||| |||||||| |||||||||||||| ||| |||| Sbjct: 430 atccttggaggaggtgataaaacacttcatgcagctttccaatgagaaagcagagcaagc 489 Query: 419 caggaatcaggcacaagcactggaagatgctctggatgtcgaagatcttgaagctgacaa 478 ||||| ||||| ||||||||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 490 aaggaaccaggcgcaagcactggaagatgccctggatgtagaagatctggaagcagacaa 549 Query: 479 gcgtccggaggacttgatgctcagttatgttagcggagagaaaggcaaggaccgatcaga 538 ||| || ||||| ||||||||||| ||||| ||||| |||||||| |||||||||||||| Sbjct: 550 gcggcctgaggatttgatgctcagctatgtcagcggggagaaagggaaggaccgatcaga 609 Query: 539 cagggagtttgttactccatggtttaagtttctgtgggagacatacaggacagtgctcga 598 ||| ||| ||| || |||||||| |||||||| ||||| |||||||| ||||| || || Sbjct: 610 cagagagcatgtcacaccatggttcaagtttctctgggaaacatacagaacagttcttga 669 Query: 599 gatactgagaaataattcaaagcttgaagcactatatgctatgactgcgca-caaggctt 657 |||| ||||||| |||||||||||||||||| |||||||||||||||| || |||||||| Sbjct: 670 gatattgagaaacaattcaaagcttgaagcattatatgctatgactgctcagcaaggctt 729 Query: 658 ttcaattttgtaag 671 |||||||||||||| Sbjct: 730 ttcaattttgtaag 743
>emb|AJ437346.1|OSA437346 Oryza sativa mRNA translation initiation factor 3 large subunit (eIF3a gene) Length = 3445 Score = 620 bits (313), Expect = e-174 Identities = 499/561 (88%) Strand = Plus / Plus Query: 111 atggcgaccttcgcgaagcccgagaacgcgctcaagagagcggaggagttgatacatgtt 170 ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 85 atggcgaccttcgcgaaacctgagaacgcgctcaagagagcggaggagttgatacatgtt 144 Query: 171 ggacaaaagcaggctgcgctgcaggcgctgcatgatctcattacatcaaagagatacaga 230 || || |||||||| ||||| |||||| | ||||||||||| || ||||| |||||||| Sbjct: 145 gggcagaagcaggcagcgctacaggcgttacatgatctcatcacttcaaaaagatacagg 204 Query: 231 tcatggcaaaagcctcttgagaagatcatgatgaagtatgtggagctgtgtgttgatcta 290 |||||||||||||| || || | ||| |||||||||||||||||||| ||||| || || Sbjct: 205 tcatggcaaaagccactcgaaaggattatgatgaagtatgtggagctctgtgtagacctg 264 Query: 291 aggaagggcagatttgccaaagatggccttattcagtacagaattgtctgccagcaagtc 350 ||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 265 aggaagggcaggtttgcgaaagatggccttattcagtacaggattgtctgccagcaagtg 324 Query: 351 aacgtgtcatctctggaggaggtcataaaacactttatgcagctgtccaatgagaaagct 410 || |||||||| |||||||||| ||||||||||| |||||||| |||||||||||||| Sbjct: 325 aatgtgtcatccttggaggaggtgataaaacacttcatgcagctttccaatgagaaagca 384 Query: 411 gaggaagccaggaatcaggcacaagcactggaagatgctctggatgtcgaagatcttgaa 470 ||| |||| ||||| ||||| ||||||||||||||||| |||||||| |||||||| ||| Sbjct: 385 gagcaagcaaggaaccaggcgcaagcactggaagatgccctggatgtagaagatctggaa 444 Query: 471 gctgacaagcgtccggaggacttgatgctcagttatgttagcggagagaaaggcaaggac 530 || |||||||| || ||||| ||||||||||| ||||| ||||| |||||||| |||||| Sbjct: 445 gcagacaagcggcctgaggatttgatgctcagctatgtcagcggggagaaagggaaggac 504 Query: 531 cgatcagacagggagtttgttactccatggtttaagtttctgtgggagacatacaggaca 590 ||||||||||| ||| ||| || |||||||| |||||||| ||||| |||||||| ||| Sbjct: 505 cgatcagacagagagcatgtcacaccatggttcaagtttctctgggaaacatacagaaca 564 Query: 591 gtgctcgagatactgagaaataattcaaagcttgaagcactatatgctatgactgcgcac 650 || || |||||| ||||||| |||||||||||||||||| |||||||||||||||| ||| Sbjct: 565 gttcttgagatattgagaaacaattcaaagcttgaagcattatatgctatgactgctcac 624 Query: 651 aaggcttttcaattttgtaag 671 ||||||||||||||||||||| Sbjct: 625 aaggcttttcaattttgtaag 645
>ref|XM_549953.1| Oryza sativa (japonica cultivar-group), mRNA Length = 807 Score = 587 bits (296), Expect = e-164 Identities = 509/580 (87%) Strand = Plus / Plus Query: 59 tctccggcgatctacaggagtagatcggccccggagacccctcgccccggccatggcgac 118 |||||||||||||||||| |||||||| |||||||| | || ||||||||||||| Sbjct: 106 tctccggcgatctacaggtgtagatcgcttccggagacatccaaccgcggccatggcgac 165 Query: 119 cttcgcgaagcccgagaacgcgctcaagagagcggaggagttgatacatgttggacaaaa 178 ||||||||| || ||||||||||||||||||||||||||||||||||||||||| || || Sbjct: 166 cttcgcgaaacctgagaacgcgctcaagagagcggaggagttgatacatgttgggcagaa 225 Query: 179 gcaggctgcgctgcaggcgctgcatgatctcattacatcaaagagatacagatcatggca 238 |||||| ||||| |||||| | ||||||||||| || ||||| |||||||| |||||||| Sbjct: 226 gcaggcagcgctacaggcgttacatgatctcatcacttcaaaaagatacaggtcatggca 285 Query: 239 aaagcctcttgagaagatcatgatgaagtatgtggagctgtgtgttgatctaaggaaggg 298 |||||| || || | ||| |||||||||||||||||||| ||||| || || |||||||| Sbjct: 286 aaagccactcgaaaggattatgatgaagtatgtggagctctgtgtagacctgaggaaggg 345 Query: 299 cagatttgccaaagatggccttattcagtacagaattgtctgccagcaagtcaacgtgtc 358 ||| ||||| ||||||||||||||||||||||| ||||||||||||||||| || ||||| Sbjct: 346 caggtttgcgaaagatggccttattcagtacaggattgtctgccagcaagtgaatgtgtc 405 Query: 359 atctctggaggaggtcataaaacactttatgcagctgtccaatgagaaagctgaggaagc 418 ||| |||||||||| ||||||||||| |||||||| |||||||||||||| ||| |||| Sbjct: 406 atccttggaggaggtgataaaacacttcatgcagctttccaatgagaaagcagagcaagc 465 Query: 419 caggaatcaggcacaagcactggaagatgctctggatgtcgaagatcttgaagctgacaa 478 ||||| ||||| ||||||||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 466 aaggaaccaggcgcaagcactggaagatgccctggatgtagaagatctggaagcagacaa 525 Query: 479 gcgtccggaggacttgatgctcagttatgttagcggagagaaaggcaaggaccgatcaga 538 ||| || ||||| ||||||||||| ||||| ||||| |||||||| |||||||||||||| Sbjct: 526 gcggcctgaggatttgatgctcagctatgtcagcggggagaaagggaaggaccgatcaga 585 Query: 539 cagggagtttgttactccatggtttaagtttctgtgggagacatacaggacagtgctcga 598 ||| ||| ||| || |||||||| |||||||| ||||| |||||||| ||||| || || Sbjct: 586 cagagagcatgtcacaccatggttcaagtttctctgggaaacatacagaacagttcttga 645 Query: 599 gatactgagaaataattcaaagcttgaagcactatatgct 638 |||| ||||||| |||||||||||||||||| |||||||| Sbjct: 646 gatattgagaaacaattcaaagcttgaagcattatatgct 685
>dbj|AK121302.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111A13, full insert sequence Length = 806 Score = 587 bits (296), Expect = e-164 Identities = 509/580 (87%) Strand = Plus / Plus Query: 59 tctccggcgatctacaggagtagatcggccccggagacccctcgccccggccatggcgac 118 |||||||||||||||||| |||||||| |||||||| | || ||||||||||||| Sbjct: 105 tctccggcgatctacaggtgtagatcgcttccggagacatccaaccgcggccatggcgac 164 Query: 119 cttcgcgaagcccgagaacgcgctcaagagagcggaggagttgatacatgttggacaaaa 178 ||||||||| || ||||||||||||||||||||||||||||||||||||||||| || || Sbjct: 165 cttcgcgaaacctgagaacgcgctcaagagagcggaggagttgatacatgttgggcagaa 224 Query: 179 gcaggctgcgctgcaggcgctgcatgatctcattacatcaaagagatacagatcatggca 238 |||||| ||||| |||||| | ||||||||||| || ||||| |||||||| |||||||| Sbjct: 225 gcaggcagcgctacaggcgttacatgatctcatcacttcaaaaagatacaggtcatggca 284 Query: 239 aaagcctcttgagaagatcatgatgaagtatgtggagctgtgtgttgatctaaggaaggg 298 |||||| || || | ||| |||||||||||||||||||| ||||| || || |||||||| Sbjct: 285 aaagccactcgaaaggattatgatgaagtatgtggagctctgtgtagacctgaggaaggg 344 Query: 299 cagatttgccaaagatggccttattcagtacagaattgtctgccagcaagtcaacgtgtc 358 ||| ||||| ||||||||||||||||||||||| ||||||||||||||||| || ||||| Sbjct: 345 caggtttgcgaaagatggccttattcagtacaggattgtctgccagcaagtgaatgtgtc 404 Query: 359 atctctggaggaggtcataaaacactttatgcagctgtccaatgagaaagctgaggaagc 418 ||| |||||||||| ||||||||||| |||||||| |||||||||||||| ||| |||| Sbjct: 405 atccttggaggaggtgataaaacacttcatgcagctttccaatgagaaagcagagcaagc 464 Query: 419 caggaatcaggcacaagcactggaagatgctctggatgtcgaagatcttgaagctgacaa 478 ||||| ||||| ||||||||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 465 aaggaaccaggcgcaagcactggaagatgccctggatgtagaagatctggaagcagacaa 524 Query: 479 gcgtccggaggacttgatgctcagttatgttagcggagagaaaggcaaggaccgatcaga 538 ||| || ||||| ||||||||||| ||||| ||||| |||||||| |||||||||||||| Sbjct: 525 gcggcctgaggatttgatgctcagctatgtcagcggggagaaagggaaggaccgatcaga 584 Query: 539 cagggagtttgttactccatggtttaagtttctgtgggagacatacaggacagtgctcga 598 ||| ||| ||| || |||||||| |||||||| ||||| |||||||| ||||| || || Sbjct: 585 cagagagcatgtcacaccatggttcaagtttctctgggaaacatacagaacagttcttga 644 Query: 599 gatactgagaaataattcaaagcttgaagcactatatgct 638 |||| ||||||| |||||||||||||||||| |||||||| Sbjct: 645 gatattgagaaacaattcaaagcttgaagcattatatgct 684
>gb|AF073329.1|AF073329 Zea mays eukaryotic translation initiation factor 3 large subunit mRNA, complete cds Length = 3293 Score = 492 bits (248), Expect = e-136 Identities = 482/560 (86%) Strand = Plus / Plus Query: 111 atggcgaccttcgcgaagcccgagaacgcgctcaagagagcggaggagttgatacatgtt 170 |||||||| |||||||| || ||||||||||| |||||||| || || || || |||||| Sbjct: 159 atggcgactttcgcgaaacctgagaacgcgctgaagagagccgaagaattaatccatgtt 218 Query: 171 ggacaaaagcaggctgcgctgcaggcgctgcatgatctcattacatcaaagagatacaga 230 || ||||||||| | || |||||||| | |||||||||||||| || || || ||||| Sbjct: 219 ggtcaaaagcagtcagccctgcaggctttacatgatctcattacctcgaaaaggtacagg 278 Query: 231 tcatggcaaaagcctcttgagaagatcatgatgaagtatgtggagctgtgtgttgatcta 290 |||||||| |||||||| || |||||||||||||||||||| || || |||||||| || Sbjct: 279 tcatggcagaagcctctcgaaaagatcatgatgaagtatgtagaactctgtgttgacctg 338 Query: 291 aggaagggcagatttgccaaagatggccttattcagtacagaattgtctgccagcaagtc 350 ||||| ||||||||||| |||||||| ||||||||||| || ||||||||||||||||| Sbjct: 339 aggaaaggcagatttgcaaaagatggtcttattcagtataggattgtctgccagcaagta 398 Query: 351 aacgtgtcatctctggaggaggtcataaaacactttatgcagctgtccaatgagaaagct 410 ||||||||||| ||||||| |||||||| ||||| |||||||| || |||||||||||| Sbjct: 399 aacgtgtcatccttggaggatgtcataaagcacttcatgcagctttcaaatgagaaagct 458 Query: 411 gaggaagccaggaatcaggcacaagcactggaagatgctctggatgtcgaagatcttgaa 470 || |||| | || ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 459 gaacaagctaagagtcaggtcgaagcactggaagatgctctggatgtcgaagatcttgaa 518 Query: 471 gctgacaagcgtccggaggacttgatgctcagttatgttagcggagagaaaggcaaggac 530 || ||||||||||| |||||| | |||||||||| ||| || || |||||||| |||||| Sbjct: 519 gcagacaagcgtcccgaggacctcatgctcagttttgtcagtggggagaaaggaaaggac 578 Query: 531 cgatcagacagggagtttgttactccatggtttaagtttctgtgggagacatacaggaca 590 |||||||| | ||| |||| ||||||||||||||||| || ||||||||||||||||| Sbjct: 579 cgatcagataaagaggttgtaactccatggtttaagttcctctgggagacatacaggact 638 Query: 591 gtgctcgagatactgagaaataattcaaagcttgaagcactatatgctatgactgcgcac 650 || || |||||||| || || ||||||||||||||||| |||||||||||||||| || Sbjct: 639 gttctagagatactaaggaacaattcaaagcttgaagcgttatatgctatgactgctcat 698 Query: 651 aaggcttttcaattttgtaa 670 | |||||||||||| ||||| Sbjct: 699 agggcttttcaattctgtaa 718
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 490 bits (247), Expect = e-135 Identities = 424/483 (87%) Strand = Plus / Minus Query: 156 gagttgatacatgttggacaaaagcaggctgcgctgcaggcgctgcatgatctcattaca 215 ||||||||||||||||| || |||||||| ||||| |||||| | ||||||||||| || Sbjct: 1177684 gagttgatacatgttgggcagaagcaggcagcgctacaggcgttacatgatctcatcact 1177625 Query: 216 tcaaagagatacagatcatggcaaaagcctcttgagaagatcatgatgaagtatgtggag 275 ||||| |||||||| |||||||||||||| || || | ||| |||||||||||||||||| Sbjct: 1177624 tcaaaaagatacaggtcatggcaaaagccactcgaaaggattatgatgaagtatgtggag 1177565 Query: 276 ctgtgtgttgatctaaggaagggcagatttgccaaagatggccttattcagtacagaatt 335 || ||||| || || ||||||||||| ||||| ||||||||||||||||||||||| ||| Sbjct: 1177564 ctctgtgtagacctgaggaagggcaggtttgcgaaagatggccttattcagtacaggatt 1177505 Query: 336 gtctgccagcaagtcaacgtgtcatctctggaggaggtcataaaacactttatgcagctg 395 |||||||||||||| || |||||||| |||||||||| ||||||||||| |||||||| Sbjct: 1177504 gtctgccagcaagtgaatgtgtcatccttggaggaggtgataaaacacttcatgcagctt 1177445 Query: 396 tccaatgagaaagctgaggaagccaggaatcaggcacaagcactggaagatgctctggat 455 |||||||||||||| ||| |||| ||||| ||||| ||||||||||||||||| |||||| Sbjct: 1177444 tccaatgagaaagcagagcaagcaaggaaccaggcgcaagcactggaagatgccctggat 1177385 Query: 456 gtcgaagatcttgaagctgacaagcgtccggaggacttgatgctcagttatgttagcgga 515 || |||||||| ||||| |||||||| || ||||| ||||||||||| ||||| ||||| Sbjct: 1177384 gtagaagatctggaagcagacaagcggcctgaggatttgatgctcagctatgtcagcggg 1177325 Query: 516 gagaaaggcaaggaccgatcagacagggagtttgttactccatggtttaagtttctgtgg 575 |||||||| ||||||||||||||||| ||| ||| || |||||||| |||||||| ||| Sbjct: 1177324 gagaaagggaaggaccgatcagacagagagcatgtcacaccatggttcaagtttctctgg 1177265 Query: 576 gagacatacaggacagtgctcgagatactgagaaataattcaaagcttgaagcactatat 635 || |||||||| ||||| || |||||| ||||||| |||||||||||||||||| ||||| Sbjct: 1177264 gaaacatacagaacagttcttgagatattgagaaacaattcaaagcttgaagcattatat 1177205 Query: 636 gct 638 ||| Sbjct: 1177204 gct 1177202 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Minus Query: 106 cggccatggcgaccttcgcgaagcccgagaacgcgctcaagagagcggagg 156 |||||||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 1177980 cggccatggcgaccttcgcgaaacctgagaacgcgctcaagagagcggagg 1177930 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 639 atgactgcgcacaaggcttttcaattttgtaag 671 |||||||| |||||||||||||||||||||||| Sbjct: 1176571 atgactgctcacaaggcttttcaattttgtaag 1176539
>dbj|AP002487.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0684C01 Length = 78600 Score = 490 bits (247), Expect = e-135 Identities = 424/483 (87%) Strand = Plus / Minus Query: 156 gagttgatacatgttggacaaaagcaggctgcgctgcaggcgctgcatgatctcattaca 215 ||||||||||||||||| || |||||||| ||||| |||||| | ||||||||||| || Sbjct: 31987 gagttgatacatgttgggcagaagcaggcagcgctacaggcgttacatgatctcatcact 31928 Query: 216 tcaaagagatacagatcatggcaaaagcctcttgagaagatcatgatgaagtatgtggag 275 ||||| |||||||| |||||||||||||| || || | ||| |||||||||||||||||| Sbjct: 31927 tcaaaaagatacaggtcatggcaaaagccactcgaaaggattatgatgaagtatgtggag 31868 Query: 276 ctgtgtgttgatctaaggaagggcagatttgccaaagatggccttattcagtacagaatt 335 || ||||| || || ||||||||||| ||||| ||||||||||||||||||||||| ||| Sbjct: 31867 ctctgtgtagacctgaggaagggcaggtttgcgaaagatggccttattcagtacaggatt 31808 Query: 336 gtctgccagcaagtcaacgtgtcatctctggaggaggtcataaaacactttatgcagctg 395 |||||||||||||| || |||||||| |||||||||| ||||||||||| |||||||| Sbjct: 31807 gtctgccagcaagtgaatgtgtcatccttggaggaggtgataaaacacttcatgcagctt 31748 Query: 396 tccaatgagaaagctgaggaagccaggaatcaggcacaagcactggaagatgctctggat 455 |||||||||||||| ||| |||| ||||| ||||| ||||||||||||||||| |||||| Sbjct: 31747 tccaatgagaaagcagagcaagcaaggaaccaggcgcaagcactggaagatgccctggat 31688 Query: 456 gtcgaagatcttgaagctgacaagcgtccggaggacttgatgctcagttatgttagcgga 515 || |||||||| ||||| |||||||| || ||||| ||||||||||| ||||| ||||| Sbjct: 31687 gtagaagatctggaagcagacaagcggcctgaggatttgatgctcagctatgtcagcggg 31628 Query: 516 gagaaaggcaaggaccgatcagacagggagtttgttactccatggtttaagtttctgtgg 575 |||||||| ||||||||||||||||| ||| ||| || |||||||| |||||||| ||| Sbjct: 31627 gagaaagggaaggaccgatcagacagagagcatgtcacaccatggttcaagtttctctgg 31568 Query: 576 gagacatacaggacagtgctcgagatactgagaaataattcaaagcttgaagcactatat 635 || |||||||| ||||| || |||||| ||||||| |||||||||||||||||| ||||| Sbjct: 31567 gaaacatacagaacagttcttgagatattgagaaacaattcaaagcttgaagcattatat 31508 Query: 636 gct 638 ||| Sbjct: 31507 gct 31505 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Minus Query: 106 cggccatggcgaccttcgcgaagcccgagaacgcgctcaagagagcggagg 156 |||||||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 32283 cggccatggcgaccttcgcgaaacctgagaacgcgctcaagagagcggagg 32233 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 639 atgactgcgcacaaggcttttcaattttgtaag 671 |||||||| |||||||||||||||||||||||| Sbjct: 30874 atgactgctcacaaggcttttcaattttgtaag 30842
>gb|AC165174.2| Zea mays clone ZMMBBb-127F19, complete sequence Length = 187659 Score = 440 bits (222), Expect = e-120 Identities = 411/474 (86%) Strand = Plus / Minus Query: 165 catgttggacaaaagcaggctgcgctgcaggcgctgcatgatctcattacatcaaagaga 224 |||||||| ||||||||||| || |||||||| | |||||||||||||| ||||| || Sbjct: 119417 catgttgggcaaaagcaggcagcactgcaggctttacatgatctcattacctcaaaaagg 119358 Query: 225 tacagatcatggcaaaagcctcttgagaagatcatgatgaagtatgtggagctgtgtgtt 284 ||||| |||||||| |||||||| || |||||||||||||||||||| || || |||||| Sbjct: 119357 tacaggtcatggcagaagcctctcgaaaagatcatgatgaagtatgtagaactctgtgtt 119298 Query: 285 gatctaaggaagggcagatttgccaaagatggccttattcagtacagaattgtctgccag 344 || || ||||| ||||||||||| |||||||| ||||||||||| || ||||| || ||| Sbjct: 119297 gacctgaggaaaggcagatttgcaaaagatggtcttattcagtataggattgtgtgtcag 119238 Query: 345 caagtcaacgtgtcatctctggaggaggtcataaaacactttatgcagctgtccaatgag 404 ||||| ||||||||||| ||||||| |||||||| |||||||||||||| ||||||||| Sbjct: 119237 caagtaaacgtgtcatccttggaggatgtcataaagcactttatgcagctttccaatgag 119178 Query: 405 aaagctgaggaagccaggaatcaggcacaagcactggaagatgctctggatgtcgaagat 464 |||||||| |||| | || ||||| | |||| |||||||||||||||||||| |||||| Sbjct: 119177 aaagctgaacaagctaagagtcaggtagaagccctggaagatgctctggatgttgaagat 119118 Query: 465 cttgaagctgacaagcgtccggaggacttgatgctcagttatgttagcggagagaaaggc 524 || ||||| ||||||||||| |||||| | |||||||||| |||||| || |||||||| Sbjct: 119117 ctggaagcagacaagcgtcccgaggacctcatgctcagttttgttagtggggagaaagga 119058 Query: 525 aaggaccgatcagacagggagtttgttactccatggtttaagtttctgtgggagacatac 584 |||||||||||||| | ||| |||| ||||||||||||||||| || |||||||||||| Sbjct: 119057 aaggaccgatcagataaagaggttgtaactccatggtttaagttcctctgggagacatac 118998 Query: 585 aggacagtgctcgagatactgagaaataattcaaagcttgaagcactatatgct 638 ||||| || || ||||||||||| || ||||||||||||||||| |||||||| Sbjct: 118997 aggactgttctagagatactgaggaacaattcaaagcttgaagcgttatatgct 118944 Score = 69.9 bits (35), Expect = 1e-08 Identities = 41/43 (95%) Strand = Plus / Minus Query: 109 ccatggcgaccttcgcgaagcccgagaacgcgctcaagagagc 151 |||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 121785 ccatggcgactttcgcgaagcctgagaacgcgctcaagagagc 121743
>gb|AY109549.1| Zea mays CL1501_1 mRNA sequence Length = 3314 Score = 353 bits (178), Expect = 5e-94 Identities = 340/394 (86%) Strand = Plus / Plus Query: 111 atggcgaccttcgcgaagcccgagaacgcgctcaagagagcggaggagttgatacatgtt 170 |||||||| |||||||| || ||||||||||| |||||||| || || || || |||||| Sbjct: 159 atggcgactttcgcgaaacctgagaacgcgctgaagagagccgaagaattaatccatgtt 218 Query: 171 ggacaaaagcaggctgcgctgcaggcgctgcatgatctcattacatcaaagagatacaga 230 || ||||||||| | || |||||||| | |||||||||||||| || || || ||||| Sbjct: 219 ggtcaaaagcagtcagccctgcaggctttacatgatctcattacctcgaaaaggtacagg 278 Query: 231 tcatggcaaaagcctcttgagaagatcatgatgaagtatgtggagctgtgtgttgatcta 290 |||||||| |||||||| || |||||||||||||||||||| || || |||||||| || Sbjct: 279 tcatggcagaagcctctcgaaaagatcatgatgaagtatgtagaactctgtgttgacctg 338 Query: 291 aggaagggcagatttgccaaagatggccttattcagtacagaattgtctgccagcaagtc 350 ||||| ||||||||||| |||||||| ||||||||||| || ||||||||||||||||| Sbjct: 339 aggaaaggcagatttgcaaaagatggtcttattcagtataggattgtctgccagcaagta 398 Query: 351 aacgtgtcatctctggaggaggtcataaaacactttatgcagctgtccaatgagaaagct 410 ||||||||||| ||||||| |||||||| ||||| |||||||| || |||||||||||| Sbjct: 399 aacgtgtcatccttggaggatgtcataaagcacttcatgcagctttcaaatgagaaagct 458 Query: 411 gaggaagccaggaatcaggcacaagcactggaagatgctctggatgtcgaagatcttgaa 470 || |||| | || ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 459 gaacaagctaagagtcaggtcgaagcactggaagatgctctggatgtcgaagatcttgaa 518 Query: 471 gctgacaagcgtccggaggacttgatgctcagtt 504 || ||||||||||| |||||| | |||||||||| Sbjct: 519 gcagacaagcgtcccgaggacctcatgctcagtt 552 Score = 127 bits (64), Expect = 5e-26 Identities = 109/124 (87%) Strand = Plus / Plus Query: 547 ttgttactccatggtttaagtttctgtgggagacatacaggacagtgctcgagatactga 606 |||| ||||||||||||||||| || ||||||||||||||||| || || |||||||| | Sbjct: 595 ttgtaactccatggtttaagttcctctgggagacatacaggactgttctagagatactaa 654 Query: 607 gaaataattcaaagcttgaagcactatatgctatgactgcgcacaaggcttttcaatttt 666 | || ||||||||||||||||| |||||||||||||||| || | |||||||||||| | Sbjct: 655 ggaacaattcaaagcttgaagcgttatatgctatgactgctcatagggcttttcaattct 714 Query: 667 gtaa 670 |||| Sbjct: 715 gtaa 718
>ref|NM_117213.2| Arabidopsis thaliana EIF3A AT4G11420 (EIF3A) mRNA, complete cds Length = 3449 Score = 97.6 bits (49), Expect = 5e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 555 ccatggtttaagtttctgtgggagacatacaggacagtgctcgagatactgagaaataat 614 |||||||||||||||||||||||||||||||||||||| || |||||| || |||| || Sbjct: 572 ccatggtttaagtttctgtgggagacatacaggacagtccttgagatattgcgaaacaac 631 Query: 615 tcaaagcttgaagcactatatgctatgac 643 |||||| | |||||||| ||||| ||||| Sbjct: 632 tcaaagttggaagcactttatgcgatgac 660 Score = 81.8 bits (41), Expect = 3e-12 Identities = 101/121 (83%) Strand = Plus / Plus Query: 166 atgttggacaaaagcaggctgcgctgcaggcgctgcatgatctcattacatcaaagagat 225 |||||||||| || || | ||| || |||||||| |||||||||||||| || ||||||| Sbjct: 183 atgttggacagaaacaagatgctcttcaggcgcttcatgatctcattacttccaagagat 242 Query: 226 acagatcatggcaaaagcctcttgagaagatcatgatgaagtatgtggagctgtgtgttg 285 ||||| | ||||| || || ||||||||||||||| | |||||| | || || ||||||| Sbjct: 243 acagagcttggcagaaaccgcttgagaagatcatgtttaagtatcttgatctttgtgttg 302 Query: 286 a 286 | Sbjct: 303 a 303
>dbj|AK131255.1| Homo sapiens cDNA FLJ16186 fis, clone BRTHA2007060, moderately similar to EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 10 Length = 3259 Score = 97.6 bits (49), Expect = 5e-17 Identities = 223/281 (79%) Strand = Plus / Plus Query: 363 ctggaggaggtcataaaacactttatgcagctgtccaatgagaaagctgaggaagccagg 422 ||||||||||||||||| || ||||||||||| || | ||||||||||| | ||| | Sbjct: 358 ctggaggaggtcataaagcattttatgcagctttctaccgagaaagctgaacaggcccgt 417 Query: 423 aatcaggcacaagcactggaagatgctctggatgtcgaagatcttgaagctgacaagcgt 482 | |||||||| ||||| ||||| || || ||||| || ||| | || || || || | Sbjct: 418 agccaggcacaggcactagaagaagcccttgatgttgatgatttagaggccgataaaagg 477 Query: 483 ccggaggacttgatgctcagttatgttagcggagagaaaggcaaggaccgatcagacagg 542 ||||||||| ||||| | || ||||| || || |||||||| || ||| |||| || || Sbjct: 478 ccggaggacctgatgttgagctatgtcagtggcgagaaagggaaagacagatctgatcgg 537 Query: 543 gagtttgttactccatggtttaagtttctgtgggagacatacaggacagtgctcgagata 602 ||| |||||| || |||||||||||||| ||||| || || ||||||||||| || ||| Sbjct: 538 gagactgttaccccctggtttaagtttctttgggaaacttataggacagtgctggaaata 597 Query: 603 ctgagaaataattcaaagcttgaagcactatatgctatgac 643 |||| || || |||||||| ||||| ||||||||||||| Sbjct: 598 ttgaggaacaactcaaagctggaagccttatatgctatgac 638 Score = 42.1 bits (21), Expect = 2.3 Identities = 87/109 (79%) Strand = Plus / Plus Query: 166 atgttggacaaaagcaggctgcgctgcaggcgctgcatgatctcattacatcaaagagat 225 ||||||| || ||||||| ||| ||||| | || ||||| ||||| || ||||| ||| Sbjct: 161 atgttgggcagaagcaggatgctttgcagactcttcatgacctcatcacctcaaaacgat 220 Query: 226 acagatcatggcaaaagcctcttgagaagatcatgatgaagtatgtgga 274 ||||| ||||||| ||| | ||||| | ||| ||| | ||||||||||| Sbjct: 221 acagagcatggcagaagacacttgaaaggattatgttcaagtatgtgga 269
>gb|AY057516.1| Arabidopsis thaliana AT4g11420/F25E4_40 mRNA sequence Length = 2033 Score = 97.6 bits (49), Expect = 5e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 555 ccatggtttaagtttctgtgggagacatacaggacagtgctcgagatactgagaaataat 614 |||||||||||||||||||||||||||||||||||||| || |||||| || |||| || Sbjct: 549 ccatggtttaagtttctgtgggagacatacaggacagtccttgagatattgcgaaacaac 608 Query: 615 tcaaagcttgaagcactatatgctatgac 643 |||||| | |||||||| ||||| ||||| Sbjct: 609 tcaaagttggaagcactttatgcgatgac 637 Score = 81.8 bits (41), Expect = 3e-12 Identities = 101/121 (83%) Strand = Plus / Plus Query: 166 atgttggacaaaagcaggctgcgctgcaggcgctgcatgatctcattacatcaaagagat 225 |||||||||| || || | ||| || |||||||| |||||||||||||| || ||||||| Sbjct: 160 atgttggacagaaacaagatgctcttcaggcgcttcatgatctcattacttccaagagat 219 Query: 226 acagatcatggcaaaagcctcttgagaagatcatgatgaagtatgtggagctgtgtgttg 285 ||||| | ||||| || || ||||||||||||||| | |||||| | || || ||||||| Sbjct: 220 acagagcttggcagaaaccgcttgagaagatcatgtttaagtatcttgatctttgtgttg 279 Query: 286 a 286 | Sbjct: 280 a 280
>gb|AF291711.1|AF291711 Arabidopsis thaliana initiation factor 3a mRNA, complete cds Length = 3310 Score = 97.6 bits (49), Expect = 5e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 555 ccatggtttaagtttctgtgggagacatacaggacagtgctcgagatactgagaaataat 614 |||||||||||||||||||||||||||||||||||||| || |||||| || |||| || Sbjct: 523 ccatggtttaagtttctgtgggagacatacaggacagtccttgagatattgcgaaacaac 582 Query: 615 tcaaagcttgaagcactatatgctatgac 643 |||||| | |||||||| ||||| ||||| Sbjct: 583 tcaaagttggaagcactttatgcgatgac 611 Score = 81.8 bits (41), Expect = 3e-12 Identities = 101/121 (83%) Strand = Plus / Plus Query: 166 atgttggacaaaagcaggctgcgctgcaggcgctgcatgatctcattacatcaaagagat 225 |||||||||| || || | ||| || |||||||| |||||||||||||| || ||||||| Sbjct: 134 atgttggacagaaacaagatgctcttcaggcgcttcatgatctcattacttccaagagat 193 Query: 226 acagatcatggcaaaagcctcttgagaagatcatgatgaagtatgtggagctgtgtgttg 285 ||||| | ||||| || || ||||||||||||||| | |||||| | || || ||||||| Sbjct: 194 acagagcttggcagaaaccgcttgagaagatcatgtttaagtatcttgatctttgtgttg 253 Query: 286 a 286 | Sbjct: 254 a 254
>emb|AL161532.2|ATCHRIV32 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 32 Length = 198788 Score = 93.7 bits (47), Expect = 7e-16 Identities = 74/83 (89%) Strand = Plus / Minus Query: 555 ccatggtttaagtttctgtgggagacatacaggacagtgctcgagatactgagaaataat 614 |||||||||||||||||||||||||||||||||||||| || |||||| || |||| || Sbjct: 2439 ccatggtttaagtttctgtgggagacatacaggacagtccttgagatattgcgaaacaac 2380 Query: 615 tcaaagcttgaagcactatatgc 637 |||||| | |||||||| ||||| Sbjct: 2379 tcaaagttggaagcactttatgc 2357 Score = 81.8 bits (41), Expect = 3e-12 Identities = 101/121 (83%) Strand = Plus / Minus Query: 166 atgttggacaaaagcaggctgcgctgcaggcgctgcatgatctcattacatcaaagagat 225 |||||||||| || || | ||| || |||||||| |||||||||||||| || ||||||| Sbjct: 2828 atgttggacagaaacaagatgctcttcaggcgcttcatgatctcattacttccaagagat 2769 Query: 226 acagatcatggcaaaagcctcttgagaagatcatgatgaagtatgtggagctgtgtgttg 285 ||||| | ||||| || || ||||||||||||||| | |||||| | || || ||||||| Sbjct: 2768 acagagcttggcagaaaccgcttgagaagatcatgtttaagtatcttgatctttgtgttg 2709 Query: 286 a 286 | Sbjct: 2708 a 2708
>emb|AL161531.2|ATCHRIV31 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 31 Length = 198301 Score = 93.7 bits (47), Expect = 7e-16 Identities = 74/83 (89%) Strand = Plus / Minus Query: 555 ccatggtttaagtttctgtgggagacatacaggacagtgctcgagatactgagaaataat 614 |||||||||||||||||||||||||||||||||||||| || |||||| || |||| || Sbjct: 195740 ccatggtttaagtttctgtgggagacatacaggacagtccttgagatattgcgaaacaac 195681 Query: 615 tcaaagcttgaagcactatatgc 637 |||||| | |||||||| ||||| Sbjct: 195680 tcaaagttggaagcactttatgc 195658 Score = 81.8 bits (41), Expect = 3e-12 Identities = 101/121 (83%) Strand = Plus / Minus Query: 166 atgttggacaaaagcaggctgcgctgcaggcgctgcatgatctcattacatcaaagagat 225 |||||||||| || || | ||| || |||||||| |||||||||||||| || ||||||| Sbjct: 196129 atgttggacagaaacaagatgctcttcaggcgcttcatgatctcattacttccaagagat 196070 Query: 226 acagatcatggcaaaagcctcttgagaagatcatgatgaagtatgtggagctgtgtgttg 285 ||||| | ||||| || || ||||||||||||||| | |||||| | || || ||||||| Sbjct: 196069 acagagcttggcagaaaccgcttgagaagatcatgtttaagtatcttgatctttgtgttg 196010 Query: 286 a 286 | Sbjct: 196009 a 196009
>emb|AL050399.1|ATF25E4 Arabidopsis thaliana DNA chromosome 4, BAC clone F25E4 (ESSA project) Length = 80019 Score = 93.7 bits (47), Expect = 7e-16 Identities = 74/83 (89%) Strand = Plus / Minus Query: 555 ccatggtttaagtttctgtgggagacatacaggacagtgctcgagatactgagaaataat 614 |||||||||||||||||||||||||||||||||||||| || |||||| || |||| || Sbjct: 23790 ccatggtttaagtttctgtgggagacatacaggacagtccttgagatattgcgaaacaac 23731 Query: 615 tcaaagcttgaagcactatatgc 637 |||||| | |||||||| ||||| Sbjct: 23730 tcaaagttggaagcactttatgc 23708 Score = 81.8 bits (41), Expect = 3e-12 Identities = 101/121 (83%) Strand = Plus / Minus Query: 166 atgttggacaaaagcaggctgcgctgcaggcgctgcatgatctcattacatcaaagagat 225 |||||||||| || || | ||| || |||||||| |||||||||||||| || ||||||| Sbjct: 24179 atgttggacagaaacaagatgctcttcaggcgcttcatgatctcattacttccaagagat 24120 Query: 226 acagatcatggcaaaagcctcttgagaagatcatgatgaagtatgtggagctgtgtgttg 285 ||||| | ||||| || || ||||||||||||||| | |||||| | || || ||||||| Sbjct: 24119 acagagcttggcagaaaccgcttgagaagatcatgtttaagtatcttgatctttgtgttg 24060 Query: 286 a 286 | Sbjct: 24059 a 24059
>gb|AC125368.7| Medicago truncatula clone mth2-13h15, complete sequence Length = 124271 Score = 87.7 bits (44), Expect = 4e-14 Identities = 260/332 (78%) Strand = Plus / Minus Query: 264 aagtatgtggagctgtgtgttgatctaaggaagggcagatttgccaaagatggccttatt 323 |||||||| ||||| |||||||| | ||||| ||| ||||||| || |||||||| ||| Sbjct: 43759 aagtatgtcgagctttgtgttgacatgaggaaaggccgatttgctaaggatggcctcatt 43700 Query: 324 cagtacagaattgtctgccagcaagtcaacgtgtcatctctggaggaggtcataaaacac 383 ||||| | || | || |||||||| || || || ||||||||||| || || ||| Sbjct: 43699 cagtatcgtataatatgtcagcaagtgaatgttagctcactggaggaggtgatcaagcac 43640 Query: 384 tttatgcagctgtccaatgagaaagctgaggaagccaggaatcaggcacaagcactggaa 443 || ||||| ||||| | ||||||||||| |||| | | |||||| || || ||||| Sbjct: 43639 ttcatgcatctgtcaacagagaaagctgaacaagcacgtagtcaggctcaggctttggaa 43580 Query: 444 gatgctctggatgtcgaagatcttgaagctgacaagcgtccggaggacttgatgctcagt 503 || || || ||||| || || || || ||||| || | || ||||| |||||||| || Sbjct: 43579 gaagcccttgatgtggatgacctggaggctgataaaaggccagaggatttgatgctgagc 43520 Query: 504 tatgttagcggagagaaaggcaaggaccgatcagacagggagtttgttactccatggttt 563 |||||||| || |||||||| ||||| |||| || ||||| ||||||| ||||||||| Sbjct: 43519 tatgttagtggcgagaaaggaaaggatagatctgatcgggagcttgttacgccatggttt 43460 Query: 564 aagtttctgtgggagacatacaggacagtgct 595 || ||||| ||||| || |||||||||||||| Sbjct: 43459 aaatttctatgggaaacttacaggacagtgct 43428
>gb|AC135797.13| Medicago truncatula clone mth2-11f7, complete sequence Length = 118242 Score = 87.7 bits (44), Expect = 4e-14 Identities = 260/332 (78%) Strand = Plus / Minus Query: 264 aagtatgtggagctgtgtgttgatctaaggaagggcagatttgccaaagatggccttatt 323 |||||||| ||||| |||||||| | ||||| ||| ||||||| || |||||||| ||| Sbjct: 37730 aagtatgtcgagctttgtgttgacatgaggaaaggccgatttgctaaggatggcctcatt 37671 Query: 324 cagtacagaattgtctgccagcaagtcaacgtgtcatctctggaggaggtcataaaacac 383 ||||| | || | || |||||||| || || || ||||||||||| || || ||| Sbjct: 37670 cagtatcgtataatatgtcagcaagtgaatgttagctcactggaggaggtgatcaagcac 37611 Query: 384 tttatgcagctgtccaatgagaaagctgaggaagccaggaatcaggcacaagcactggaa 443 || ||||| ||||| | ||||||||||| |||| | | |||||| || || ||||| Sbjct: 37610 ttcatgcatctgtcaacagagaaagctgaacaagcacgtagtcaggctcaggctttggaa 37551 Query: 444 gatgctctggatgtcgaagatcttgaagctgacaagcgtccggaggacttgatgctcagt 503 || || || ||||| || || || || ||||| || | || ||||| |||||||| || Sbjct: 37550 gaagcccttgatgtggatgacctggaggctgataaaaggccagaggatttgatgctgagc 37491 Query: 504 tatgttagcggagagaaaggcaaggaccgatcagacagggagtttgttactccatggttt 563 |||||||| || |||||||| ||||| |||| || ||||| ||||||| ||||||||| Sbjct: 37490 tatgttagtggcgagaaaggaaaggatagatctgatcgggagcttgttacgccatggttt 37431 Query: 564 aagtttctgtgggagacatacaggacagtgct 595 || ||||| ||||| || |||||||||||||| Sbjct: 37430 aaatttctatgggaaacttacaggacagtgct 37399
>emb|X79794.1|NTPNLA35 N.tabacum mRNA pNLA-35 Length = 3256 Score = 77.8 bits (39), Expect = 4e-11 Identities = 129/159 (81%) Strand = Plus / Plus Query: 167 tgttggacaaaagcaggctgcgctgcaggcgctgcatgatctcattacatcaaagagata 226 ||||||||||||||| | |||||||| || || |||||||| ||||| |||| ||| || Sbjct: 100 tgttggacaaaagcaagaagcgctgcaagcacttcatgatcttattacttcaaggaggta 159 Query: 227 cagatcatggcaaaagcctcttgagaagatcatgatgaagtatgtggagctgtgtgttga 286 ||| |||||||||| ||||||| | ||| ||| | |||||||| ||||| |||||||| Sbjct: 160 tagagcatggcaaaaaactcttgaaaggataatgttcaagtatgtagagctatgtgttga 219 Query: 287 tctaaggaagggcagatttgccaaagatggccttattca 325 | || | ||| || |||||||| |||||||| ||||| Sbjct: 220 catgagaagggggaggtttgccaaggatggcctaattca 258 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 501 agttatgttagcggagagaaaggcaaggaccgatcagacagggagtttgttactccatgg 560 ||||||||||| || |||||||| || || |||| || | ||| |||| ||||| ||| Sbjct: 434 agttatgttagtggggagaaaggaaaagatagatctgatcgcgagcttgtcactccctgg 493 Query: 561 tttaagtttctgtgggagacata 583 ||||||||| ||||||||||||| Sbjct: 494 tttaagtttttgtgggagacata 516
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Plus Query: 175 aaaagcaggctgcgctgcaggcgctg 200 |||||||||||| ||||||||||||| Sbjct: 3187411 aaaagcaggctgtgctgcaggcgctg 3187436
>ref|XM_419750.1| PREDICTED: Gallus gallus similar to RIKEN cDNA 6330407J23 (LOC421713), mRNA Length = 2481 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 464 tcttgaagctgacaagcgtcc 484 ||||||||||||||||||||| Sbjct: 434 tcttgaagctgacaagcgtcc 414
>ref|XM_537451.2| PREDICTED: Canis familiaris similar to Cell growth regulator with RING finger domain 1 (Cell growth regulatory gene 19 protein) (LOC480328), mRNA Length = 1486 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 432 caagcactggaagatgctctg 452 ||||||||||||||||||||| Sbjct: 407 caagcactggaagatgctctg 427
>emb|AL392044.7| Human DNA sequence from clone RP11-195E11 on chromosome 9 Contains the 5' end of a novel gene (MGC21981), three novel genes and a CpG island, complete sequence Length = 167206 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 289 taaggaagggcagatttgccaaaga 313 ||||||||||||||||| ||||||| Sbjct: 65575 taaggaagggcagattttccaaaga 65599
>emb|AL157935.28| Human DNA sequence from clone RP11-203J24 on chromosome 9 Contains the 5' end of the ENG gene for endoglin (Osler-Rendu-Weber syndrome 1) (END, ORW, HHT1, ORW1, CD105), the AK1 gene for adenylate kinase 1, the ST6GALNAC6 gene for CMP-NeuAC:(beta)-N-acetylgalactosaminide (alpha)2,6-sialyltransferase member VI (ST6GALNACVI), the SIAT7D gene for sialyltransferase 7D ((alpha-N-acetylneuraminyl-2,3-beta-galactosyl-1, 3)-N-acetyl galactosaminide alpha-2,6-sialyltransferase) (SIAT3C, ST6GALNAC4, ST6GALNACIV), the DPM2 gene for dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit (MGC21559), the gene for a novel protien containing FLJ00179, a novel gene and ten CpG islands, complete sequence Length = 164201 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 397 ccaatgagaaagctgaggaag 417 ||||||||||||||||||||| Sbjct: 103844 ccaatgagaaagctgaggaag 103864
>gb|DQ282338.1| Uncultured bacterium clone SAF-Int-G9 unnamed integron integrase gene, partial cds Length = 489 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 agaacgcgctcaagagagcgg 153 ||||||||||||||||||||| Sbjct: 314 agaacgcgctcaagagagcgg 334
>gb|DQ282321.1| Uncultured bacterium clone SAF-Int-E2 unnamed integron integrase gene, partial cds Length = 489 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 agaacgcgctcaagagagcgg 153 ||||||||||||||||||||| Sbjct: 314 agaacgcgctcaagagagcgg 334
>gb|AF165139.6| Homo sapiens chromosome 9 clone RP11-44L18 map unmapped, complete sequence Length = 153942 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 289 taaggaagggcagatttgccaaaga 313 ||||||||||||||||| ||||||| Sbjct: 37423 taaggaagggcagattttccaaaga 37399
>emb|AL117259.6|CNS01DRJ Human chromosome 14 DNA sequence BAC R-304M6 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 193301 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 ctgtccaatgagaaagctgag 413 ||||||||||||||||||||| Sbjct: 25422 ctgtccaatgagaaagctgag 25442
>gb|AC140416.2| Mus musculus BAC clone RP24-347A16 from 6, complete sequence Length = 188390 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 403 agaaagctgaggaagccagga 423 ||||||||||||||||||||| Sbjct: 157580 agaaagctgaggaagccagga 157600
>gb|AC111028.10| Mus musculus chromosome 8, clone RP23-221P20, complete sequence Length = 193256 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 601 tactgagaaataattcaaag 620 |||||||||||||||||||| Sbjct: 178019 tactgagaaataattcaaag 178000
>gb|AC161212.9| Mus musculus chromosome 3, clone RP24-267M11, complete sequence Length = 147921 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 actggaagatgctctggatg 456 |||||||||||||||||||| Sbjct: 41593 actggaagatgctctggatg 41612
>gb|AC137610.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0018H09, complete sequence Length = 155329 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 463 atcttgaagctgacaagcgt 482 |||||||||||||||||||| Sbjct: 6697 atcttgaagctgacaagcgt 6716
>gb|AC132488.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0522C01, complete sequence Length = 136120 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 463 atcttgaagctgacaagcgt 482 |||||||||||||||||||| Sbjct: 131733 atcttgaagctgacaagcgt 131752
>gb|AC163218.5| Mus musculus chromosome 7, clone RP24-102H24, complete sequence Length = 194207 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 459 gaagatcttgaagctgacaa 478 |||||||||||||||||||| Sbjct: 58482 gaagatcttgaagctgacaa 58463
>ref|XM_756391.1| Ustilago maydis 521 hypothetical protein (UM05337.1) partial mRNA Length = 3624 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 179 gcaggctgcgctgcaggcgctgca 202 |||||| ||||||||||||||||| Sbjct: 2705 gcaggcggcgctgcaggcgctgca 2682
>gb|AC127326.4| Mus musculus BAC clone RP23-251C4 from 8, complete sequence Length = 207802 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 601 tactgagaaataattcaaag 620 |||||||||||||||||||| Sbjct: 5544 tactgagaaataattcaaag 5525
>emb|AL591030.6| Human DNA sequence from clone RP11-35J1 on chromosome 6 Contains putative novel gene, complete sequence Length = 152361 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 tcattacatcaaagagatac 227 |||||||||||||||||||| Sbjct: 115848 tcattacatcaaagagatac 115829
>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome Length = 2575032 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 tggaagatgctctggatgtc 458 |||||||||||||||||||| Sbjct: 197561 tggaagatgctctggatgtc 197580
>emb|AL139232.13| Human DNA sequence from clone RP1-237I15 on chromosome 6 Contains a novel gene, the 5' end of the gene for flavohemoprotein B5+B5R and a CpG island, complete sequence Length = 137659 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 tcattacatcaaagagatac 227 |||||||||||||||||||| Sbjct: 131592 tcattacatcaaagagatac 131573
>emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete genome; segment 10/16 Length = 348642 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cgctgcaggcgctgcatgat 206 |||||||||||||||||||| Sbjct: 175710 cgctgcaggcgctgcatgat 175691
>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16 Length = 346274 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 agcaggctgcgctgcaggcgctgc 201 ||||||| |||||||||||||||| Sbjct: 5659 agcaggcggcgctgcaggcgctgc 5682
>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14 Length = 348014 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 agcaggctgcgctgcaggcgctgc 201 ||||||| |||||||||||||||| Sbjct: 269533 agcaggcggcgctgcaggcgctgc 269556
>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14 Length = 348997 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 cgctgcaggcgctgcatgat 206 |||||||||||||||||||| Sbjct: 341436 cgctgcaggcgctgcatgat 341455
>emb|BX640419.1| Bordetella pertussis strain Tohama I, complete genome; segment 9/12 Length = 349672 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 178 agcaggctgcgctgcaggcgctgc 201 ||||||| |||||||||||||||| Sbjct: 281867 agcaggcggcgctgcaggcgctgc 281844
>emb|BX640413.1| Bordetella pertussis strain Tohama I, complete genome; segment 3/12 Length = 349028 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 cgctgcaggcgctgcatgat 206 |||||||||||||||||||| Sbjct: 242868 cgctgcaggcgctgcatgat 242887
>emb|AL662812.12| Mouse DNA sequence from clone RP23-48A2 on chromosome 11 Contains the gene for a novel protein similar to smoothelin Smtn, three novel genes, the Mybbp1a gene for MYB binding protein (P160) 1a, a ribosomal protein 7a (Rpl7a) pseudogene, the 5' end of the Ube2g1 gene for ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, C. elegans) and four CpG islands, complete sequence Length = 258521 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 gagaaagctgaggaagccag 421 |||||||||||||||||||| Sbjct: 70876 gagaaagctgaggaagccag 70857
>gb|AC113115.17| Mus musculus chromosome 7, clone RP23-338L5, complete sequence Length = 197397 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 459 gaagatcttgaagctgacaa 478 |||||||||||||||||||| Sbjct: 119413 gaagatcttgaagctgacaa 119394
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 gcgctgcaggcgctgcatga 205 |||||||||||||||||||| Sbjct: 4443423 gcgctgcaggcgctgcatga 4443442
>dbj|AB003701.1| Cupriavidus necator gene for D-(-)-3-hydroxybutyrate-oligomer hydrolase, complete cds Length = 3173 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 gcgctgcaggcgctgcatga 205 |||||||||||||||||||| Sbjct: 1576 gcgctgcaggcgctgcatga 1595
>gb|AC016395.5| Homo sapiens chromosome 10 clone RP11-153K11, complete sequence Length = 166869 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 agtatgtggagctgtgtgtt 284 |||||||||||||||||||| Sbjct: 61522 agtatgtggagctgtgtgtt 61541
>gb|AC112217.2| Homo sapiens chromosome 3 clone CTD-2028L5, complete sequence Length = 156545 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 ttctgtgggagacatacagg 587 |||||||||||||||||||| Sbjct: 65555 ttctgtgggagacatacagg 65574
>gb|AC068127.6| Homo sapiens BAC clone RP11-587O9 from 4, complete sequence Length = 203523 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 tcattacatcaaagagatac 227 |||||||||||||||||||| Sbjct: 18374 tcattacatcaaagagatac 18355
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 463 atcttgaagctgacaagcgt 482 |||||||||||||||||||| Sbjct: 11104443 atcttgaagctgacaagcgt 11104462
>emb|BX005183.9| Zebrafish DNA sequence from clone CH211-136A14 in linkage group 3, complete sequence Length = 168366 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 550 ttactccatggtttaagtttctgt 573 |||||||||||||||| ||||||| Sbjct: 35824 ttactccatggtttaaatttctgt 35801
>gb|AC007372.4|AC007372 Homo sapiens chromosome 14 BAC containing gene for type 2 iodothyronine deiodinase (DIO2) gene, complete CDS, complete sequence Length = 154796 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 tgcatgatctcattacatca 218 |||||||||||||||||||| Sbjct: 153418 tgcatgatctcattacatca 153399
>emb|BX649497.23| Zebrafish DNA sequence from clone DKEYP-15A6 in linkage group 22, complete sequence Length = 106459 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 550 ttactccatggtttaagttt 569 |||||||||||||||||||| Sbjct: 77068 ttactccatggtttaagttt 77087
>emb|AL049837.4|CNS0000F Human chromosome 14 DNA sequence BAC R-959A22 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 168677 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 tgcatgatctcattacatca 218 |||||||||||||||||||| Sbjct: 21734 tgcatgatctcattacatca 21753
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 gcgctgcaggcgctgcatga 205 |||||||||||||||||||| Sbjct: 4445950 gcgctgcaggcgctgcatga 4445969
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 119 cttcgcgaagcccgagaacgcgctcaag 146 |||||||| |||||||||||||| |||| Sbjct: 2949534 cttcgcgatgcccgagaacgcgcccaag 2949561
>emb|AL928550.20| Mouse DNA sequence from clone RP23-272I15 on chromosome 2, complete sequence Length = 99786 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 agaaagctgaggaagccagg 422 |||||||||||||||||||| Sbjct: 60113 agaaagctgaggaagccagg 60132
>gb|AC131655.4| Mus musculus BAC clone RP23-233G16 from 8, complete sequence Length = 190990 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 577 agacatacaggacagtgctc 596 |||||||||||||||||||| Sbjct: 78744 agacatacaggacagtgctc 78763
>gb|BC025823.1| Mus musculus cDNA sequence BC011467, mRNA (cDNA clone IMAGE:5100525), complete cds Length = 2377 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 gagaaagctgaggaagccag 421 |||||||||||||||||||| Sbjct: 822 gagaaagctgaggaagccag 841 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,519,925 Number of Sequences: 3902068 Number of extensions: 5519925 Number of successful extensions: 103227 Number of sequences better than 10.0: 66 Number of HSP's better than 10.0 without gapping: 66 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 102696 Number of HSP's gapped (non-prelim): 527 length of query: 671 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 648 effective length of database: 17,143,297,704 effective search space: 11108856912192 effective search space used: 11108856912192 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
