ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | basd26h07 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X97771.1|HVPSII10K H.vulgare mRNA for PSII 10kD protein Length = 575 Score = 745 bits (376), Expect = 0.0 Identities = 376/376 (100%) Strand = Plus / Plus Query: 266 gggcctggtggtggagtggcgttcaaggaaggcgtcgatgcgtctggaagggtagccaag 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 gggcctggtggtggagtggcgttcaaggaaggcgtcgatgcgtctggaagggtagccaag 239 Query: 326 gggaagggtgtttaccagtttgccgacaagtatggagcaaatgttgatgggtacagccct 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 240 gggaagggtgtttaccagtttgccgacaagtatggagcaaatgttgatgggtacagccct 299 Query: 386 atatacacaccagaagagtggtctccaagtggcgacgtttatgttggaggaaagacgggg 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 atatacacaccagaagagtggtctccaagtggcgacgtttatgttggaggaaagacgggg 359 Query: 446 ctgtttctctgggcagtgactcttgctggaattctgctgggcggtgctcttcttgtctac 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 ctgtttctctgggcagtgactcttgctggaattctgctgggcggtgctcttcttgtctac 419 Query: 506 agtactagcgccttggcttcctgaagcctatgtgcagcaaaccaagctatgcaccaaacg 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 420 agtactagcgccttggcttcctgaagcctatgtgcagcaaaccaagctatgcaccaaacg 479 Query: 566 atgtgtataatagtgcggattataaccgtcaggacatatgtaatggatacaaatatcact 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 480 atgtgtataatagtgcggattataaccgtcaggacatatgtaatggatacaaatatcact 539 Query: 626 acccgcaaatcagtaa 641 |||||||||||||||| Sbjct: 540 acccgcaaatcagtaa 555 Score = 347 bits (175), Expect = 3e-92 Identities = 175/175 (100%) Strand = Plus / Plus Query: 2 gcgagtgttgcacaaacaacatgtctgcctgtgtcatggcatctttggctctgaaaccat 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7 gcgagtgttgcacaaacaacatgtctgcctgtgtcatggcatctttggctctgaaaccat 66 Query: 62 cttcctctcctctgttacaacgatccaagcttggaggcgtgcgaccatcggcgaggccgt 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 67 cttcctctcctctgttacaacgatccaagcttggaggcgtgcgaccatcggcgaggccgt 126 Query: 122 cgttggtcatagtggccaagaaggcgaagaaggtccagactgcccaaccctacgg 176 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127 cgttggtcatagtggccaagaaggcgaagaaggtccagactgcccaaccctacgg 181
>emb|AJ234408.1|HVU234408 Hordeum vulgare partial mRNA; clone cMWG0658 Length = 377 Score = 379 bits (191), Expect = e-102 Identities = 207/211 (98%), Gaps = 2/211 (0%) Strand = Plus / Plus Query: 266 gggcctggtggtggagtggcgttcaaggaaggcgtcgatgcgtct-ggaagggtagccaa 324 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 167 gggcctggtggtggagtggcgttcaaggaaggcgtcgatgcgtcttggaagggtagccaa 226 Query: 325 ggggaagggtgtttaccagtttg-ccgacaagtatggagcaaatgttgatgggtacagcc 383 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 227 ggggaagggtgtttaccagtthdnccgacaagtatggagcaaatgttgatgggtacagcc 286 Query: 384 ctatatacacaccagaagagtggtctccaagtggcgacgtttatgttggaggaaagacgg 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 287 ctatatacacaccagaagagtggtctccaagtggcgacgtttatgttggaggaaagacgg 346 Query: 444 ggctgtttctctgggcagtgactcttgctgg 474 ||||||||||||||||||||||||||||||| Sbjct: 347 ggctgtttctctgggcagtgactcttgctgg 377 Score = 329 bits (166), Expect = 7e-87 Identities = 166/166 (100%) Strand = Plus / Plus Query: 11 gcacaaacaacatgtctgcctgtgtcatggcatctttggctctgaaaccatcttcctctc 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3 gcacaaacaacatgtctgcctgtgtcatggcatctttggctctgaaaccatcttcctctc 62 Query: 71 ctctgttacaacgatccaagcttggaggcgtgcgaccatcggcgaggccgtcgttggtca 130 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63 ctctgttacaacgatccaagcttggaggcgtgcgaccatcggcgaggccgtcgttggtca 122 Query: 131 tagtggccaagaaggcgaagaaggtccagactgcccaaccctacgg 176 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123 tagtggccaagaaggcgaagaaggtccagactgcccaaccctacgg 168
>emb|AJ234420.1|HVU234420 Hordeum vulgare partial mRNA; clone cMWG0681 Length = 247 Score = 329 bits (166), Expect = 7e-87 Identities = 166/166 (100%) Strand = Plus / Plus Query: 11 gcacaaacaacatgtctgcctgtgtcatggcatctttggctctgaaaccatcttcctctc 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3 gcacaaacaacatgtctgcctgtgtcatggcatctttggctctgaaaccatcttcctctc 62 Query: 71 ctctgttacaacgatccaagcttggaggcgtgcgaccatcggcgaggccgtcgttggtca 130 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63 ctctgttacaacgatccaagcttggaggcgtgcgaccatcggcgaggccgtcgttggtca 122 Query: 131 tagtggccaagaaggcgaagaaggtccagactgcccaaccctacgg 176 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123 tagtggccaagaaggcgaagaaggtccagactgcccaaccctacgg 168 Score = 161 bits (81), Expect = 3e-36 Identities = 81/81 (100%) Strand = Plus / Plus Query: 266 gggcctggtggtggagtggcgttcaaggaaggcgtcgatgcgtctggaagggtagccaag 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 167 gggcctggtggtggagtggcgttcaaggaaggcgtcgatgcgtctggaagggtagccaag 226 Query: 326 gggaagggtgtttaccagttt 346 ||||||||||||||||||||| Sbjct: 227 gggaagggtgtttaccagttt 247
>ref|XM_476619.1| Oryza sativa (japonica cultivar-group), mRNA Length = 620 Score = 224 bits (113), Expect = 3e-55 Identities = 209/241 (86%) Strand = Plus / Plus Query: 266 gggcctggtggtggagtggcgttcaaggaaggcgtcgatgcgtctggaagggtagccaag 325 ||||||| ||| ||||||| |||||||||||| || ||||| |||||||||||||||||| Sbjct: 220 gggcctgctggaggagtggtgttcaaggaaggtgttgatgcatctggaagggtagccaag 279 Query: 326 gggaagggtgtttaccagtttgccgacaagtatggagcaaatgttgatgggtacagccct 385 || |||||| ||||||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 280 ggaaagggtctttaccagttttccaacaagtatggagcaaatgttgatgggtacagccca 339 Query: 386 atatacacaccagaagagtggtctccaagtggcgacgtttatgttggaggaaagacgggg 445 ||||| || |||||||| |||||| ||| ||| || || ||||||||||||||| | || Sbjct: 340 atatataccccagaagaatggtcttcaactggtgatgtctatgttggaggaaaggcaggt 399 Query: 446 ctgtttctctgggcagtgactcttgctggaattctgctgggcggtgctcttcttgtctac 505 | ||||||||||| | ||||||||||||||||| | ||||| ||| ||||||||||| Sbjct: 400 ttacttctctgggcaatcactcttgctggaattctagttggcggcgctattcttgtctac 459 Query: 506 a 506 | Sbjct: 460 a 460 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 19 aacatgtctgcctgtgtcatggcatctttggctctgaaaccatct 63 |||||| |||||| ||||||||| ||| ||||||||||||||||| Sbjct: 64 aacatggctgcctctgtcatggcttctctggctctgaaaccatct 108
>dbj|AK062172.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-C07, full insert sequence Length = 620 Score = 224 bits (113), Expect = 3e-55 Identities = 209/241 (86%) Strand = Plus / Plus Query: 266 gggcctggtggtggagtggcgttcaaggaaggcgtcgatgcgtctggaagggtagccaag 325 ||||||| ||| ||||||| |||||||||||| || ||||| |||||||||||||||||| Sbjct: 220 gggcctgctggaggagtggtgttcaaggaaggtgttgatgcatctggaagggtagccaag 279 Query: 326 gggaagggtgtttaccagtttgccgacaagtatggagcaaatgttgatgggtacagccct 385 || |||||| ||||||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 280 ggaaagggtctttaccagttttccaacaagtatggagcaaatgttgatgggtacagccca 339 Query: 386 atatacacaccagaagagtggtctccaagtggcgacgtttatgttggaggaaagacgggg 445 ||||| || |||||||| |||||| ||| ||| || || ||||||||||||||| | || Sbjct: 340 atatataccccagaagaatggtcttcaactggtgatgtctatgttggaggaaaggcaggt 399 Query: 446 ctgtttctctgggcagtgactcttgctggaattctgctgggcggtgctcttcttgtctac 505 | ||||||||||| | ||||||||||||||||| | ||||| ||| ||||||||||| Sbjct: 400 ttacttctctgggcaatcactcttgctggaattctagttggcggcgctattcttgtctac 459 Query: 506 a 506 | Sbjct: 460 a 460 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 19 aacatgtctgcctgtgtcatggcatctttggctctgaaaccatct 63 |||||| |||||| ||||||||| ||| ||||||||||||||||| Sbjct: 64 aacatggctgcctctgtcatggcttctctggctctgaaaccatct 108
>dbj|AK120691.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169L11, full insert sequence Length = 777 Score = 216 bits (109), Expect = 7e-53 Identities = 208/241 (86%) Strand = Plus / Plus Query: 266 gggcctggtggtggagtggcgttcaaggaaggcgtcgatgcgtctggaagggtagccaag 325 ||||||| ||| ||||||| |||||||||||| || ||||| |||||||||||||||||| Sbjct: 221 gggcctgctggaggagtggtgttcaaggaaggtgttgatgcatctggaagggtagccaag 280 Query: 326 gggaagggtgtttaccagtttgccgacaagtatggagcaaatgttgatgggtacagccct 385 || |||||| ||||||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 281 ggaaagggtctttaccagttttccaacaagtatggagcaaatgttgatgggtacagccca 340 Query: 386 atatacacaccagaagagtggtctccaagtggcgacgtttatgttggaggaaagacgggg 445 ||||| || |||||||| |||||| ||| ||| || || ||||||||||||||| | || Sbjct: 341 atatataccccagaagaatggtcttcaactggtgatgtctatgttggaggaaaggcaggt 400 Query: 446 ctgtttctctgggcagtgactcttgctggaattctgctgggcggtgctcttcttgtctac 505 | ||||||||||| | ||||||||||||| ||| | ||||| ||| ||||||||||| Sbjct: 401 ttacttctctgggcaatcactcttgctggaagtctagttggcggcgctattcttgtctac 460 Query: 506 a 506 | Sbjct: 461 a 461 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 19 aacatgtctgcctgtgtcatggcatctttggctctgaaaccatct 63 |||||| |||||| ||||||||| ||| ||||||||||||||||| Sbjct: 65 aacatggctgcctctgtcatggcttctctggctctgaaaccatct 109
>ref|XM_476620.1| Oryza sativa (japonica cultivar-group), mRNA Length = 405 Score = 190 bits (96), Expect = 4e-45 Identities = 177/204 (86%) Strand = Plus / Plus Query: 322 caaggggaagggtgtttaccagtttgccgacaagtatggagcaaatgttgatgggtacag 381 ||||||||| || || |||||||||||| |||||||||||| ||||||||||| ||||| Sbjct: 198 caaggggaaaggggtctaccagtttgccagcaagtatggagctaatgttgatggatacag 257 Query: 382 ccctatatacacaccagaagagtggtctccaagtggcgacgtttatgttggaggaaagac 441 ||| ||||| | ||||| || ||||| |||||||| || |||||| |||||||||||| Sbjct: 258 cccaatatataacccagaggaatggtcaccaagtggtgatgtttatactggaggaaagac 317 Query: 442 ggggctgtttctctgggcagtgactcttgctggaattctgctgggcggtgctcttcttgt 501 ||| |||| ||||||||||| |||||| ||||||||||||||| |||||||||||||| Sbjct: 318 agggttgttgctctgggcagtcactctttctggaattctgctggctggtgctcttcttgt 377 Query: 502 ctacagtactagcgccttggcttc 525 ||||| |||||| ||||||||||| Sbjct: 378 ctacaatactagtgccttggcttc 401
>gb|AY146990.1| Xerophyta humilis photosystem II 10 kDa protein (PsbR) mRNA, complete cds Length = 698 Score = 121 bits (61), Expect = 3e-24 Identities = 154/185 (83%) Strand = Plus / Plus Query: 323 aaggggaagggtgtttaccagtttgccgacaagtatggagcaaatgttgatgggtacagc 382 ||||| |||||||| ||||| |||| ||||| ||||| |||||||||||||| |||||| Sbjct: 290 aagggaaagggtgtctaccaatttgtggacaaatatggtgcaaatgttgatggctacagc 349 Query: 383 cctatatacacaccagaagagtggtctccaagtggcgacgtttatgttggaggaaagacg 442 || || ||| ||||||| || |||||||| ||||| || |||||||||||||||| || Sbjct: 350 ccgatctactcaccagacgaatggtctcctagtggtgatgtttatgttggaggaaccact 409 Query: 443 gggctgtttctctgggcagtgactcttgctggaattctgctgggcggtgctcttcttgtc 502 || || || |||||||| | |||||||||||| ||||| || |||||||||||||| Sbjct: 410 ggtctcattgtctgggcaatcactcttgctggacttctgggtggaggtgctcttcttgtg 469 Query: 503 tacag 507 ||||| Sbjct: 470 tacag 474
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 119 bits (60), Expect = 1e-23 Identities = 90/100 (90%) Strand = Plus / Plus Query: 433 aggaaagacggggctgtttctctgggcagtgactcttgctggaattctgctgggcggtgc 492 ||||||||| ||| |||| ||||||||||| |||||| ||||||||||||||| ||||| Sbjct: 2490023 aggaaagacagggttgttgctctgggcagtcactctttctggaattctgctggctggtgc 2490082 Query: 493 tcttcttgtctacagtactagcgccttggcttcctgaagc 532 |||||||||||||| |||||| ||||||||||| |||||| Sbjct: 2490083 tcttcttgtctacaatactagtgccttggcttcttgaagc 2490122 Score = 83.8 bits (42), Expect = 7e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 324 aggggaagggtgtttaccagtttgccgacaagtatggagcaaatgttgatgggtacag 381 |||| |||||| ||||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 2487079 agggaaagggtctttaccagttttccaacaagtatggagcaaatgttgatgggtacag 2487136 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 264 tagggcctggtggtggagtggcgttcaaggaaggcgtcgatgcgtctggaagggtagcca 323 ||||||||| ||| ||||||| |||||||||||| || ||||| |||||||||||||||| Sbjct: 2486933 tagggcctgctggaggagtggtgttcaaggaaggtgttgatgcatctggaagggtagcca 2486992 Query: 324 agg 326 ||| Sbjct: 2486993 agg 2486995 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 324 aggggaagggtgtttaccagtttgccgacaagtatggagcaaatgttgatgggtacag 381 ||||||| || || |||||||||||| |||||||||||| ||||||||||| ||||| Sbjct: 2489696 aggggaaaggggtctaccagtttgccagcaagtatggagctaatgttgatggatacag 2489753 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 450 ttctctgggcagtgactcttgctggaattctgctgggcggtgctcttcttgtctaca 506 ||||||||||| | ||||||||||||||||| | ||||| ||| |||||||||||| Sbjct: 2487572 ttctctgggcaatcactcttgctggaattctagttggcggcgctattcttgtctaca 2487628 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 19 aacatgtctgcctgtgtcatggcatctttggctctgaaaccatct 63 |||||| |||||| ||||||||| ||| ||||||||||||||||| Sbjct: 2486553 aacatggctgcctctgtcatggcttctctggctctgaaaccatct 2486597 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Plus Query: 377 tacagccctatatacacaccagaagagtggtctccaagtggcgacgtttatgttggagg 435 |||||||| ||||| || |||||||| |||||| ||| ||| || || ||||||||||| Sbjct: 2487375 tacagcccaatatataccccagaagaatggtcttcaactggtgatgtctatgttggagg 2487433
>dbj|AP004263.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0022E03 Length = 163032 Score = 119 bits (60), Expect = 1e-23 Identities = 90/100 (90%) Strand = Plus / Plus Query: 433 aggaaagacggggctgtttctctgggcagtgactcttgctggaattctgctgggcggtgc 492 ||||||||| ||| |||| ||||||||||| |||||| ||||||||||||||| ||||| Sbjct: 55003 aggaaagacagggttgttgctctgggcagtcactctttctggaattctgctggctggtgc 55062 Query: 493 tcttcttgtctacagtactagcgccttggcttcctgaagc 532 |||||||||||||| |||||| ||||||||||| |||||| Sbjct: 55063 tcttcttgtctacaatactagtgccttggcttcttgaagc 55102 Score = 83.8 bits (42), Expect = 7e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 324 aggggaagggtgtttaccagtttgccgacaagtatggagcaaatgttgatgggtacag 381 |||| |||||| ||||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 52059 agggaaagggtctttaccagttttccaacaagtatggagcaaatgttgatgggtacag 52116 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 264 tagggcctggtggtggagtggcgttcaaggaaggcgtcgatgcgtctggaagggtagcca 323 ||||||||| ||| ||||||| |||||||||||| || ||||| |||||||||||||||| Sbjct: 51913 tagggcctgctggaggagtggtgttcaaggaaggtgttgatgcatctggaagggtagcca 51972 Query: 324 agg 326 ||| Sbjct: 51973 agg 51975 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 324 aggggaagggtgtttaccagtttgccgacaagtatggagcaaatgttgatgggtacag 381 ||||||| || || |||||||||||| |||||||||||| ||||||||||| ||||| Sbjct: 54676 aggggaaaggggtctaccagtttgccagcaagtatggagctaatgttgatggatacag 54733 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 450 ttctctgggcagtgactcttgctggaattctgctgggcggtgctcttcttgtctaca 506 ||||||||||| | ||||||||||||||||| | ||||| ||| |||||||||||| Sbjct: 52552 ttctctgggcaatcactcttgctggaattctagttggcggcgctattcttgtctaca 52608 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 19 aacatgtctgcctgtgtcatggcatctttggctctgaaaccatct 63 |||||| |||||| ||||||||| ||| ||||||||||||||||| Sbjct: 51533 aacatggctgcctctgtcatggcttctctggctctgaaaccatct 51577 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Plus Query: 377 tacagccctatatacacaccagaagagtggtctccaagtggcgacgtttatgttggagg 435 |||||||| ||||| || |||||||| |||||| ||| ||| || || ||||||||||| Sbjct: 52355 tacagcccaatatataccccagaagaatggtcttcaactggtgatgtctatgttggagg 52413
>emb|X70088.1|NTNTPII10 N. tabacum mRNA for NtpII10 Length = 639 Score = 89.7 bits (45), Expect = 1e-14 Identities = 96/113 (84%) Strand = Plus / Plus Query: 323 aaggggaagggtgtttaccagtttgccgacaagtatggagcaaatgttgatgggtacagc 382 ||||| |||||||||||||| || | ||||| |||||||||||||||||||| |||||| Sbjct: 230 aagggaaagggtgtttaccaattcgttgacaaatatggagcaaatgttgatggatacagc 289 Query: 383 cctatatacacaccagaagagtggtctccaagtggcgacgtttatgttggagg 435 || || |||| |||| || |||||||||||||| || || ||||||||||| Sbjct: 290 cccatctacaacacagatgactggtctccaagtggtgatgtctatgttggagg 342
>gb|AY310792.1| Nicotiana benthamiana clone 10-302 unknown mRNA Length = 438 Score = 85.7 bits (43), Expect = 2e-13 Identities = 97/115 (84%) Strand = Plus / Plus Query: 321 ccaaggggaagggtgtttaccagtttgccgacaagtatggagcaaatgttgatgggtaca 380 ||||||| |||||||||||||| || | ||||| |||||||||||||||||||| |||| Sbjct: 83 ccaagggaaagggtgtttaccaattcgttgacaaatatggagcaaatgttgatggataca 142 Query: 381 gccctatatacacaccagaagagtggtctccaagtggcgacgtttatgttggagg 435 |||| || |||| |||| || ||||||||||| || || || ||||||||||| Sbjct: 143 gccccatctacaacacagatgactggtctccaagcggtgatgtctatgttggagg 197
>gb|AY310790.1| Nicotiana benthamiana clone 10-284 unknown mRNA Length = 373 Score = 83.8 bits (42), Expect = 7e-13 Identities = 96/115 (83%) Strand = Plus / Plus Query: 321 ccaaggggaagggtgtttaccagtttgccgacaagtatggagcaaatgttgatgggtaca 380 ||||||| |||||||||||||| || | ||||| |||||||||||||||||||| |||| Sbjct: 19 ccaagggaaagggtgtttaccaattngttgacaaatatggagcaaatgttgatggataca 78 Query: 381 gccctatatacacaccagaagagtggtctccaagtggcgacgtttatgttggagg 435 |||| || |||| |||| || |||||| |||| || || || ||||||||||| Sbjct: 79 gccccatctacaacacagatgactggtctncaagcggtgatgtntatgttggagg 133
>dbj|AP003957.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1470_H06 Length = 62794 Score = 83.8 bits (42), Expect = 7e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 324 aggggaagggtgtttaccagtttgccgacaagtatggagcaaatgttgatgggtacag 381 |||| |||||| ||||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 60826 agggaaagggtctttaccagttttccaacaagtatggagcaaatgttgatgggtacag 60883 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 264 tagggcctggtggtggagtggcgttcaaggaaggcgtcgatgcgtctggaagggtagcca 323 ||||||||| ||| ||||||| |||||||||||| || ||||| |||||||||||||||| Sbjct: 60680 tagggcctgctggaggagtggtgttcaaggaaggtgttgatgcatctggaagggtagcca 60739 Query: 324 agg 326 ||| Sbjct: 60740 agg 60742 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 450 ttctctgggcagtgactcttgctggaattctgctgggcggtgctcttcttgtctaca 506 ||||||||||| | ||||||||||||||||| | ||||| ||| |||||||||||| Sbjct: 61319 ttctctgggcaatcactcttgctggaattctagttggcggcgctattcttgtctaca 61375 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 19 aacatgtctgcctgtgtcatggcatctttggctctgaaaccatct 63 |||||| |||||| ||||||||| ||| ||||||||||||||||| Sbjct: 60300 aacatggctgcctctgtcatggcttctctggctctgaaaccatct 60344 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Plus Query: 377 tacagccctatatacacaccagaagagtggtctccaagtggcgacgtttatgttggagg 435 |||||||| ||||| || |||||||| |||||| ||| ||| || || ||||||||||| Sbjct: 61122 tacagcccaatatataccccagaagaatggtcttcaactggtgatgtctatgttggagg 61180
>emb|X04401.1|STLS1R Potato mRNA for light inducible tissue-specific ST-LS1 gene Length = 560 Score = 77.8 bits (39), Expect = 4e-11 Identities = 96/115 (83%) Strand = Plus / Plus Query: 321 ccaaggggaagggtgtttaccagtttgccgacaagtatggagcaaatgttgatgggtaca 380 ||||||| |||||||| ||||| | || ||||| |||||||| ||||||||||| |||| Sbjct: 209 ccaagggaaagggtgtgtaccaatatgttgacaaatatggagctaatgttgatggataca 268 Query: 381 gccctatatacacaccagaagagtggtctccaagtggcgacgtttatgttggagg 435 | || || |||| |||| ||||||||||||||||| || || ||||||||||| Sbjct: 269 gtcccatctacaacacagatgagtggtctccaagtggtgatgtctatgttggagg 323
>gb|AY348557.1| Trifolium pratense 10 kDa photosystem II polypeptide mRNA, complete cds Length = 584 Score = 65.9 bits (33), Expect = 2e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 323 aaggggaagggtgtttaccagtttgccgacaagtatggagcaaatgttgatgggtacagc 382 ||||| ||||||||||||||||||| ||||| ||||| || ||||||||||| ||||| Sbjct: 212 aagggaaagggtgtttaccagtttgtggacaaatatggtgctaatgttgatggatacagt 271 Query: 383 cctat 387 ||||| Sbjct: 272 cctat 276
>emb|Z75521.1|LESEND34 L.esculentum mRNA for photosystem II 10 kD protein Length = 540 Score = 61.9 bits (31), Expect = 2e-06 Identities = 94/115 (81%) Strand = Plus / Plus Query: 321 ccaaggggaagggtgtttaccagtttgccgacaagtatggagcaaatgttgatgggtaca 380 ||||||| |||||||| ||||| | || ||||| |||||||| ||||||||||| |||| Sbjct: 186 ccaagggaaagggtgtgtaccaatatgttgacaaatatggagctaatgttgatggataca 245 Query: 381 gccctatatacacaccagaagagtggtctccaagtggcgacgtttatgttggagg 435 | || || |||| | || || |||||||||||||| || || ||||||||||| Sbjct: 246 gtcccatctacaacacggatgaatggtctccaagtggtgatgtctatgttggagg 300
>gb|J03887.1|SPIPSBIA Spinach psbI gene encoding the 10kd polypeptide of photosystem II, complete cds Length = 590 Score = 61.9 bits (31), Expect = 2e-06 Identities = 75/87 (86%), Gaps = 2/87 (2%) Strand = Plus / Plus Query: 296 ggcgtcgatgcgtctggaagggtagccaagggg-aagggtgtttaccagtttgccgacaa 354 ||||| ||| ||||||||||| |||||| ||| |||||||||||||| |||| ||||| Sbjct: 207 ggcgttgattcgtctggaagga-agccaacgggcaagggtgtttaccaatttgttgacaa 265 Query: 355 gtatggagcaaatgttgatgggtacag 381 |||||| || ||||||||||| ||||| Sbjct: 266 gtatggtgccaatgttgatggttacag 292
>emb|X95987.1|LEPSIIPRE L.esculentum mRNA for 10kDa polypeptide precursor of photosystem II Length = 632 Score = 54.0 bits (27), Expect = 6e-04 Identities = 93/115 (80%) Strand = Plus / Plus Query: 321 ccaaggggaagggtgtttaccagtttgccgacaagtatggagcaaatgttgatgggtaca 380 ||||||| |||||||| ||||| | || ||||| ||||| || ||||||||||| |||| Sbjct: 209 ccaagggaaagggtgtgtaccaatatgttgacaaatatggggctaatgttgatggataca 268 Query: 381 gccctatatacacaccagaagagtggtctccaagtggcgacgtttatgttggagg 435 | || || |||| | || || |||||||||||||| || || ||||||||||| Sbjct: 269 gtcccatctacaacacggatgaatggtctccaagtggtgatgtctatgttggagg 323
>dbj|AP006696.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT17N21, TM0403, complete sequence Length = 97807 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 324 aggggaagggtgtttaccagtttgccgacaagtatggagcaaatgttgatgggtacag 381 |||| |||||||||||||||| || |||||||| || || ||||||||||| ||||| Sbjct: 84296 agggaaagggtgtttaccagtatgtggacaagtacggtgctaatgttgatggatacag 84239
>dbj|AP006396.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT26P21, TM0279b, complete sequence Length = 28275 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 324 aggggaagggtgtttaccagtttgccgacaagtatggagcaaatgttgatgggtacag 381 |||| |||||||||||||||| || |||||||| || || ||||||||||| ||||| Sbjct: 14668 agggaaagggtgtttaccagtatgtggacaagtacggtgctaatgttgatggatacag 14725
>emb|X04753.1|STLS1G Potato light-inducible tissue-specific ST-LS1 gene Length = 3699 Score = 48.1 bits (24), Expect = 0.036 Identities = 36/40 (90%) Strand = Plus / Plus Query: 396 cagaagagtggtctccaagtggcgacgtttatgttggagg 435 |||| ||||||||||||||||| || || ||||||||||| Sbjct: 3003 cagatgagtggtctccaagtggtgatgtctatgttggagg 3042 Score = 44.1 bits (22), Expect = 0.56 Identities = 49/58 (84%) Strand = Plus / Plus Query: 324 aggggaagggtgtttaccagtttgccgacaagtatggagcaaatgttgatgggtacag 381 |||| |||||||| ||||| | || ||||| |||||||| ||||||||||| ||||| Sbjct: 2835 agggaaagggtgtgtaccaatatgttgacaaatatggagctaatgttgatggatacag 2892
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 102 gcgaccatcggcgaggccgtcg 123 |||||||||||||||||||||| Sbjct: 577556 gcgaccatcggcgaggccgtcg 577535
>dbj|AB090880.1| Aster tripolium mRNA for thiol protease, complete cds Length = 910 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Plus Query: 323 aaggggaagggtgtttaccagtttgccgacaagtatgg 360 |||||||||||||| ||||| |||| ||||||||||| Sbjct: 318 aaggggaagggtgtctaccaatttgttgacaagtatgg 355
>gb|AC139131.19| Mus musculus chromosome 7, clone RP23-301N20, complete sequence Length = 230772 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 228 ttcacatgaatttttgtgtgt 248 ||||||||||||||||||||| Sbjct: 199305 ttcacatgaatttttgtgtgt 199285
>ref|NM_106555.2| Arabidopsis thaliana unknown protein AT1G79040 mRNA, complete cds Length = 647 Score = 42.1 bits (21), Expect = 2.2 Identities = 51/61 (83%) Strand = Plus / Plus Query: 332 ggtgtttaccagtttgccgacaagtatggagcaaatgttgatgggtacagccctatatac 391 ||||||||| ||| | ||||||||||||||| || || ||||| ||||| ||||| ||| Sbjct: 293 ggtgtttacaagtacgtcgacaagtatggagctaacgtcgatggatacagtcctatttac 352 Query: 392 a 392 | Sbjct: 353 a 353
>gb|AC168062.3| Mus musculus BAC clone RP23-191D8 from chromosome 14, complete sequence Length = 174822 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 gtatacatatacatgtatatg 200 ||||||||||||||||||||| Sbjct: 98237 gtatacatatacatgtatatg 98217
>gb|AC154761.2| Mus musculus BAC clone RP24-416E4 from chromosome 17, complete sequence Length = 169027 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 gttgagaaccaccttcacatg 235 ||||||||||||||||||||| Sbjct: 65672 gttgagaaccaccttcacatg 65652
>gb|AC154627.2| Mus musculus BAC clone RP23-312J2 from chromosome 14, complete sequence Length = 225640 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 180 gtatacatatacatgtatatg 200 ||||||||||||||||||||| Sbjct: 218987 gtatacatatacatgtatatg 219007
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 tggccaagaaggcgaagaagg 154 ||||||||||||||||||||| Sbjct: 2184178 tggccaagaaggcgaagaagg 2184158
>gb|AC114404.12| Mus musculus chromosome 7, clone RP24-350D24, complete sequence Length = 188585 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 228 ttcacatgaatttttgtgtgt 248 ||||||||||||||||||||| Sbjct: 27473 ttcacatgaatttttgtgtgt 27453
>gb|AC110622.6| Mus musculus BAC clone RP23-204H3 from chromosome 8, complete sequence Length = 190632 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 gtatacatatacatgtatatg 200 ||||||||||||||||||||| Sbjct: 63937 gtatacatatacatgtatatg 63917
>gb|AC127577.4| Mus musculus BAC clone RP24-243K23 from chromosome 6, complete sequence Length = 154273 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatgg 201 ||||||||||||||||||||| Sbjct: 92671 tatacatatacatgtatatgg 92651
>gb|AC137677.24| Mus musculus chromosome 1, clone RP23-257D12, complete sequence Length = 189162 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 gtatacatatacatgtatatg 200 ||||||||||||||||||||| Sbjct: 72968 gtatacatatacatgtatatg 72948
>emb|AL031428.9|HS184J9 Human DNA sequence from clone RP1-184J9 on chromosome 1p35.1-36.12 Contains the 5' end of a novel gene, the gene for a novel protein (KIAA0601), a novel gene and the 5' end of the LUZP1 gene for leucine zipper protein 1, complete sequence Length = 100951 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 gtatacatatacatgtatatg 200 ||||||||||||||||||||| Sbjct: 81620 gtatacatatacatgtatatg 81600
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 tggccaagaaggcgaagaagg 154 ||||||||||||||||||||| Sbjct: 2523534 tggccaagaaggcgaagaagg 2523514
>emb|AL360170.23| Human DNA sequence from clone RP11-131N13 on chromosome 10 Contains the 5' end of the gene for Ste20-related serine/threonine kinase (SLK) and a CpG island, complete sequence Length = 60252 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 180 gtatacatatacatgtatatg 200 ||||||||||||||||||||| Sbjct: 36110 gtatacatatacatgtatatg 36130
>emb|AL162390.9| Human DNA sequence from clone RP11-386J22 on chromosome 9 Contains the SMC5L1 gene for SMC5 structural maintenance of chromosomes 5-like 1 (yeast) (SMC5, KIAA0594), the BTEB1 gene for basic transcription element binding protein 1 (BTEB, KLF9) and three CpG islands, complete sequence Length = 182427 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 180 gtatacatatacatgtatatg 200 ||||||||||||||||||||| Sbjct: 174951 gtatacatatacatgtatatg 174971 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 174975 tatacatatacatgtatatg 174956
>gb|AY096544.1| Arabidopsis thaliana putative photosystem II polypeptide (At1g79040) mRNA, complete cds Length = 454 Score = 42.1 bits (21), Expect = 2.2 Identities = 51/61 (83%) Strand = Plus / Plus Query: 332 ggtgtttaccagtttgccgacaagtatggagcaaatgttgatgggtacagccctatatac 391 ||||||||| ||| | ||||||||||||||| || || ||||| ||||| ||||| ||| Sbjct: 226 ggtgtttacaagtacgtcgacaagtatggagctaacgtcgatggatacagtcctatttac 285 Query: 392 a 392 | Sbjct: 286 a 286
>gb|AY070103.1| Arabidopsis thaliana putative photosystem II polypeptide protein (At1g79040) mRNA, complete cds Length = 645 Score = 42.1 bits (21), Expect = 2.2 Identities = 51/61 (83%) Strand = Plus / Plus Query: 332 ggtgtttaccagtttgccgacaagtatggagcaaatgttgatgggtacagccctatatac 391 ||||||||| ||| | ||||||||||||||| || || ||||| ||||| ||||| ||| Sbjct: 276 ggtgtttacaagtacgtcgacaagtatggagctaacgtcgatggatacagtcctatttac 335 Query: 392 a 392 | Sbjct: 336 a 336
>gb|AC092864.5| Homo sapiens 12p BAC RP11-653A22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 59892 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 231 acatgaatttttgtgtgtgtg 251 ||||||||||||||||||||| Sbjct: 44535 acatgaatttttgtgtgtgtg 44555
>gb|AF035554.1|AF035554 Pisaster ochraceus protein kinase C-related kinase (PRK2) mRNA, partial cds Length = 2892 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 410 ccaagtggcgacgtttatgtt 430 ||||||||||||||||||||| Sbjct: 1485 ccaagtggcgacgtttatgtt 1465
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 gtatacatatacatgtatatg 200 ||||||||||||||||||||| Sbjct: 40289862 gtatacatatacatgtatatg 40289842 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 gtatacatatacatgtatatg 200 ||||||||||||||||||||| Sbjct: 40289828 gtatacatatacatgtatatg 40289808 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 40289838 tatacatatacatgtatatg 40289857 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 40289804 tatacatatacatgtatatg 40289823 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 21830136 tatacatatacatgtatatg 21830117
>emb|BX815694.1|CNS0ABGL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS85ZA04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 580 Score = 42.1 bits (21), Expect = 2.2 Identities = 51/61 (83%) Strand = Plus / Plus Query: 332 ggtgtttaccagtttgccgacaagtatggagcaaatgttgatgggtacagccctatatac 391 ||||||||| ||| | ||||||||||||||| || || ||||| ||||| ||||| ||| Sbjct: 259 ggtgtttacaagtacgtcgacaagtatggagctaacgtcgatggatacagtcctatttac 318 Query: 392 a 392 | Sbjct: 319 a 319
>emb|BX813377.1|CNS0AC7S Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB13ZE07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 580 Score = 42.1 bits (21), Expect = 2.2 Identities = 51/61 (83%) Strand = Plus / Plus Query: 332 ggtgtttaccagtttgccgacaagtatggagcaaatgttgatgggtacagccctatatac 391 ||||||||| ||| | ||||||||||||||| || || ||||| ||||| ||||| ||| Sbjct: 259 ggtgtttacaagtacgtcgacaagtatggagctaacgtcgatggatacagtcctatttac 318 Query: 392 a 392 | Sbjct: 319 a 319
>emb|BX813545.1|CNS0AC1I Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB23ZD11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 576 Score = 42.1 bits (21), Expect = 2.2 Identities = 51/61 (83%) Strand = Plus / Plus Query: 332 ggtgtttaccagtttgccgacaagtatggagcaaatgttgatgggtacagccctatatac 391 ||||||||| ||| | ||||||||||||||| || || ||||| ||||| ||||| ||| Sbjct: 255 ggtgtttacaagtacgtcgacaagtatggagctaacgtcgatggatacagtcctatttac 314 Query: 392 a 392 | Sbjct: 315 a 315
>emb|BX815389.1|CNS0ABFG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS56ZH04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 580 Score = 42.1 bits (21), Expect = 2.2 Identities = 51/61 (83%) Strand = Plus / Plus Query: 332 ggtgtttaccagtttgccgacaagtatggagcaaatgttgatgggtacagccctatatac 391 ||||||||| ||| | ||||||||||||||| || || ||||| ||||| ||||| ||| Sbjct: 259 ggtgtttacaagtacgtcgacaagtatggagctaacgtcgatggatacagtcctatttac 318 Query: 392 a 392 | Sbjct: 319 a 319
>emb|BX818517.1|CNS0AB2P Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL83ZE09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 579 Score = 42.1 bits (21), Expect = 2.2 Identities = 51/61 (83%) Strand = Plus / Plus Query: 332 ggtgtttaccagtttgccgacaagtatggagcaaatgttgatgggtacagccctatatac 391 ||||||||| ||| | ||||||||||||||| || || ||||| ||||| ||||| ||| Sbjct: 258 ggtgtttacaagtacgtcgacaagtatggagctaacgtcgatggatacagtcctatttac 317 Query: 392 a 392 | Sbjct: 318 a 318
>emb|BX817507.1|CNS0AAZC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL27ZF07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 588 Score = 42.1 bits (21), Expect = 2.2 Identities = 51/61 (83%) Strand = Plus / Plus Query: 332 ggtgtttaccagtttgccgacaagtatggagcaaatgttgatgggtacagccctatatac 391 ||||||||| ||| | ||||||||||||||| || || ||||| ||||| ||||| ||| Sbjct: 261 ggtgtttacaagtacgtcgacaagtatggagctaacgtcgatggatacagtcctatttac 320 Query: 392 a 392 | Sbjct: 321 a 321
>dbj|AP006843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1793G04 Length = 156714 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 gtatacatatacatgtatatg 200 ||||||||||||||||||||| Sbjct: 155640 gtatacatatacatgtatatg 155620 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 gtatacatatacatgtatatg 200 ||||||||||||||||||||| Sbjct: 155606 gtatacatatacatgtatatg 155586 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 155616 tatacatatacatgtatatg 155635 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 155582 tatacatatacatgtatatg 155601
>gb|AC006156.5|AC006156 Homo sapiens BAC clone RP11-344D2 from Y, complete sequence Length = 112581 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 180 gtatacatatacatgtatatg 200 ||||||||||||||||||||| Sbjct: 111858 gtatacatatacatgtatatg 111878
>gb|AY084512.1| Arabidopsis thaliana clone 110067 mRNA, complete sequence Length = 611 Score = 42.1 bits (21), Expect = 2.2 Identities = 51/61 (83%) Strand = Plus / Plus Query: 332 ggtgtttaccagtttgccgacaagtatggagcaaatgttgatgggtacagccctatatac 391 ||||||||| ||| | ||||||||||||||| || || ||||| ||||| ||||| ||| Sbjct: 293 ggtgtttacaagtacgtcgacaagtatggagctaacgtcgatggatacagtcctatttac 352 Query: 392 a 392 | Sbjct: 353 a 353
>dbj|BS000067.1| Pan troglodytes chromosome 22 clone:RP43-053F13, map 22, complete sequences Length = 74098 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 180 gtatacatatacatgtatatg 200 ||||||||||||||||||||| Sbjct: 23482 gtatacatatacatgtatatg 23502
>emb|AJ293729.1|ATH293729 Arabidopsis thaliana partial mRNA for 60S ribosomal protein L24 (RL24 gene) Length = 1310 Score = 42.1 bits (21), Expect = 2.2 Identities = 51/61 (83%) Strand = Plus / Plus Query: 332 ggtgtttaccagtttgccgacaagtatggagcaaatgttgatgggtacagccctatatac 391 ||||||||| ||| | ||||||||||||||| || || ||||| ||||| ||||| ||| Sbjct: 968 ggtgtttacaagtacgtcgacaagtatggagctaacgtcgatggatacagtcctatttac 1027 Query: 392 a 392 | Sbjct: 1028 a 1028
>gb|AF078129.1|HB205SIC1 Plasmodium knowlesi from Malaysia 205 kDa Pk1(B+)1+ SICAvar antigen (SICAvar-HB205) gene, exons 1-3 Length = 3156 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 gtatacatatacatgtatatg 200 ||||||||||||||||||||| Sbjct: 1497 gtatacatatacatgtatatg 1477 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 1473 tatacatatacatgtatatg 1492 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 993 tatacatatacatgtatatg 974
>dbj|AP001680.1| Homo sapiens genomic DNA, chromosome 21q, section 24/105 Length = 340000 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 180 gtatacatatacatgtatatg 200 ||||||||||||||||||||| Sbjct: 314864 gtatacatatacatgtatatg 314884
>gb|AC116863.6| Mus musculus chromosome 19, clone RP24-408G9, complete sequence Length = 171621 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 180 gtatacatatacatgtatatg 200 ||||||||||||||||||||| Sbjct: 43297 gtatacatatacatgtatatg 43317
>gb|AC162449.4| Mus musculus chromosome 1, clone RP23-424E19, complete sequence Length = 184609 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 180 gtatacatatacatgtatatg 200 ||||||||||||||||||||| Sbjct: 29442 gtatacatatacatgtatatg 29462
>gb|L31936.1|BNABIF11G Brassica campestris ssp. pekinensis (clone bif11) photosystem II 10kDa polypeptide mRNA, complete cds Length = 551 Score = 42.1 bits (21), Expect = 2.2 Identities = 42/49 (85%) Strand = Plus / Plus Query: 344 tttgccgacaagtatggagcaaatgttgatgggtacagccctatataca 392 |||| |||||||||||| || || |||||||| ||||| ||||| |||| Sbjct: 253 tttgtcgacaagtatggtgcgaacgttgatggatacagtcctatctaca 301
>gb|AC125793.2| Homo sapiens chromosome 16 clone CTD-3253I12, complete sequence Length = 117647 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 gtatacatatacatgtatatg 200 ||||||||||||||||||||| Sbjct: 112687 gtatacatatacatgtatatg 112667 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 112663 tatacatatacatgtatatg 112682
>dbj|AP001136.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B738P18, LL56-APP region, complete sequence Length = 88499 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 180 gtatacatatacatgtatatg 200 ||||||||||||||||||||| Sbjct: 17247 gtatacatatacatgtatatg 17267
>gb|AC116825.23| Mus musculus chromosome 8, clone RP24-367H14, complete sequence Length = 182808 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 gtatacatatacatgtatat 199 |||||||||||||||||||| Sbjct: 109185 gtatacatatacatgtatat 109166
>gb|AC133456.11| Mus musculus chromosome 5, clone RP24-465G18, complete sequence Length = 162210 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 90516 tatacatatacatgtatatg 90497 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 90493 tatacatatacatgtatatg 90512
>gb|AC120391.6| Mus musculus chromosome 1, clone RP24-310B3, complete sequence Length = 172679 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 177 tgggtatacatatacatgtatatg 200 |||||||||||||||||| ||||| Sbjct: 61610 tgggtatacatatacatgaatatg 61587
>gb|AC118200.8| Mus musculus chromosome 5, clone RP23-330E5, complete sequence Length = 208710 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 124700 tatacatatacatgtatatg 124719
>gb|AC108914.8| Mus musculus chromosome 1, clone RP23-435E15, complete sequence Length = 212494 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 gtatacatatacatgtatat 199 |||||||||||||||||||| Sbjct: 16803 gtatacatatacatgtatat 16784
>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome Length = 2201561 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 gtatggagcaaatgttgatg 374 |||||||||||||||||||| Sbjct: 1176145 gtatggagcaaatgttgatg 1176164
>gb|AC119957.9| Mus musculus chromosome 17, clone RP24-466G23, complete sequence Length = 153209 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 gtatacatatacatgtatat 199 |||||||||||||||||||| Sbjct: 15593 gtatacatatacatgtatat 15612
>gb|AC132830.12| Mus musculus chromosome 1, clone RP24-566B6, complete sequence Length = 205300 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 atatacacaccagaagagtg 405 |||||||||||||||||||| Sbjct: 143573 atatacacaccagaagagtg 143554
>gb|AC166830.3| Mus musculus BAC clone RP23-246O1 from chromosome 13, complete sequence Length = 213487 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 75239 tatacatatacatgtatatg 75220
>gb|AC169511.1| Mus musculus BAC clone RP23-81P24 from chromosome 14, complete sequence Length = 252587 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 atacatatacatgtatatgg 201 |||||||||||||||||||| Sbjct: 152569 atacatatacatgtatatgg 152588
>gb|AC113547.27| Mus musculus chromosome 12, clone RP23-263J2, complete sequence Length = 197242 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 ctcttcttgtctacagtact 511 |||||||||||||||||||| Sbjct: 4550 ctcttcttgtctacagtact 4569
>gb|AC101687.11| Mus musculus chromosome 8, clone RP23-205D7, complete sequence Length = 185997 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 67115 tatacatatacatgtatatg 67134
>gb|AC005740.1| Homo sapiens chromosome 5p, BAC clone 50g21 (LBNL H154), complete sequence Length = 186780 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 42515 tatacatatacatgtatatg 42496 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 42492 tatacatatacatgtatatg 42511
>gb|AC163622.4| Mus musculus BAC clone RP24-566G6 from chromosome y, complete sequence Length = 166756 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 124325 tatacatatacatgtatatg 124306 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 124302 tatacatatacatgtatatg 124321
>gb|AC136905.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0064E13, complete sequence Length = 150158 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 tggcgttcaaggaaggcgtc 301 |||||||||||||||||||| Sbjct: 82005 tggcgttcaaggaaggcgtc 82024
>gb|AC102751.14| Mus musculus chromosome 19, clone RP24-531N3, complete sequence Length = 178150 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 36317 tatacatatacatgtatatg 36336
>gb|AC099572.12| Mus musculus chromosome 15, clone RP23-16A17, complete sequence Length = 200229 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 gtatacatatacatgtatat 199 |||||||||||||||||||| Sbjct: 174608 gtatacatatacatgtatat 174589
>gb|AC009341.7| Drosophila melanogaster clone BACR07G13, complete sequence Length = 183723 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 tacatatacatgtatatggc 202 |||||||||||||||||||| Sbjct: 78662 tacatatacatgtatatggc 78643
>gb|AC102825.6| Mus musculus chromosome 15, clone RP24-227B12, complete sequence Length = 153145 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 gtagccaaggggaagggtgt 336 |||||||||||||||||||| Sbjct: 35644 gtagccaaggggaagggtgt 35663
>gb|AC141477.4| Mus musculus BAC clone RP23-386J14 from chromosome 10, complete sequence Length = 213720 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 38100 tatacatatacatgtatatg 38081
>gb|AC140187.3| Mus musculus BAC clone RP24-364N20 from chromosome Y, complete sequence Length = 151358 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 132369 tatacatatacatgtatatg 132350 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 132346 tatacatatacatgtatatg 132365
>gb|AC125156.3| Mus musculus BAC clone RP24-386H5 from chromosome 18, complete sequence Length = 189554 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 182632 tatacatatacatgtatatg 182651
>gb|AC134595.3| Mus musculus BAC clone RP23-388E14 from chromosome 15, complete sequence Length = 189263 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 134379 tatacatatacatgtatatg 134398
>gb|AC139847.3| Mus musculus BAC clone RP23-387P21 from chromosome 3, complete sequence Length = 203824 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 gtatacatatacatgtatat 199 |||||||||||||||||||| Sbjct: 69113 gtatacatatacatgtatat 69094
>gb|AC136956.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0038B22, complete sequence Length = 177557 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 tggcgttcaaggaaggcgtc 301 |||||||||||||||||||| Sbjct: 117735 tggcgttcaaggaaggcgtc 117754
>gb|DP000012.1| Macropus eugenii target 1 genomic scaffold Length = 1996640 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 1591636 tatacatatacatgtatatg 1591617 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 1591613 tatacatatacatgtatatg 1591632
>gb|AC161586.5| Mus musculus BAC clone RP24-457J18 from chromosome 13, complete sequence Length = 146936 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 gtatacatatacatgtatat 199 |||||||||||||||||||| Sbjct: 32460 gtatacatatacatgtatat 32441
>gb|AC118540.15| Mus musculus strain 129/SvJ clone mgs1-169d12 map 3, complete sequence Length = 191014 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 128826 tatacatatacatgtatatg 128845
>gb|AC124467.3| Mus musculus BAC clone RP24-163L18 from chromosome 15, complete sequence Length = 169366 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 168849 tatacatatacatgtatatg 168830
>gb|AC107865.7| Mus musculus chromosome 1, clone RP23-389C9, complete sequence Length = 204959 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 gtatacatatacatgtatat 199 |||||||||||||||||||| Sbjct: 203040 gtatacatatacatgtatat 203021
>gb|AC147147.2| Pan troglodytes BAC clone CH251-230I19 from Y, complete sequence Length = 143402 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 23671 tatacatatacatgtatatg 23652
>gb|AC127699.4| Mus musculus BAC clone RP24-114P21 from chromosome 7, complete sequence Length = 152811 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 gtatacatatacatgtatat 199 |||||||||||||||||||| Sbjct: 65041 gtatacatatacatgtatat 65060
>emb|CT009738.8| Mouse DNA sequence from clone RP23-217H9 on chromosome 12, complete sequence Length = 209619 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 97151 tatacatatacatgtatatg 97132 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 97128 tatacatatacatgtatatg 97147
>gb|AC146452.3| Pan troglodytes BAC clone CH251-483N3 from Y, complete sequence Length = 215209 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 33736 tatacatatacatgtatatg 33755
>gb|AC122450.4| Mus musculus BAC clone RP24-249K4 from chromosome 1, complete sequence Length = 154695 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 104129 tatacatatacatgtatatg 104110
>gb|AC132955.3| Mus musculus BAC clone RP24-266J20 from chromosome 6, complete sequence Length = 174507 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 aacaacatgtctgcctgtgt 35 |||||||||||||||||||| Sbjct: 118461 aacaacatgtctgcctgtgt 118442
>gb|AC134545.5| Mus musculus BAC clone RP24-470H2 from chromosome 18, complete sequence Length = 155887 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 tcttgctggaattctgctgg 485 |||||||||||||||||||| Sbjct: 25880 tcttgctggaattctgctgg 25861
>gb|AC128672.4| Mus musculus BAC clone RP23-136O15 from chromosome 18, complete sequence Length = 215137 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 466 tcttgctggaattctgctgg 485 |||||||||||||||||||| Sbjct: 7089 tcttgctggaattctgctgg 7108
>gb|AC124524.3| Mus musculus BAC clone RP23-402C9 from chromosome 14, complete sequence Length = 213751 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 78223 tatacatatacatgtatatg 78204
>gb|AC122878.4| Mus musculus BAC clone RP23-116F15 from chromosome 14, complete sequence Length = 226611 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 137221 tatacatatacatgtatatg 137202
>gb|AC004381.1|HUAC004381 Homo sapiens Chromosome 16 BAC clone CIT987SK-44M2, complete sequence Length = 213541 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 29053 tatacatatacatgtatatg 29072
>gb|AF441733.2| Mus musculus clone RP23-225M6 45S pre-ribosomal RNA gene, partial sequence; and intergenic spacer, partial sequence Length = 31129 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 5381 tatacatatacatgtatatg 5362
>gb|AC127283.2| Mus musculus BAC clone RP23-323E20 from chromosome 3, complete sequence Length = 210014 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 157193 tatacatatacatgtatatg 157212
>gb|AC122422.4| Mus musculus BAC clone RP24-169N11 from chromosome 17, complete sequence Length = 181626 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 gtatacatatacatgtatat 199 |||||||||||||||||||| Sbjct: 68338 gtatacatatacatgtatat 68319
>gb|AC090042.2| Homo sapiens chromosome 3 clone RP11-21B12 map 3p, complete sequence Length = 167559 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 gtatacatatacatgtatat 199 |||||||||||||||||||| Sbjct: 154437 gtatacatatacatgtatat 154418
>gb|AC125050.6| Mus musculus BAC clone RP23-372I18 from chromosome 7, complete sequence Length = 199810 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 accatcttcctctcctctgt 76 |||||||||||||||||||| Sbjct: 84465 accatcttcctctcctctgt 84446
>gb|AC122872.3| Mus musculus BAC clone RP23-110E8 from 1, complete sequence Length = 190644 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 67886 tatacatatacatgtatatg 67867
>gb|AC122841.4| Mus musculus BAC clone RP23-194E5 from 3, complete sequence Length = 200088 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 98049 tatacatatacatgtatatg 98068
>gb|AC127326.4| Mus musculus BAC clone RP23-251C4 from 8, complete sequence Length = 207802 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 140785 tatacatatacatgtatatg 140766 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 140762 tatacatatacatgtatatg 140781
>gb|AC125195.4| Mus musculus BAC clone RP23-246M2 from 2, complete sequence Length = 195041 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 gtatacatatacatgtatat 199 |||||||||||||||||||| Sbjct: 13171 gtatacatatacatgtatat 13190
>gb|AC121583.3| Mus musculus BAC clone RP23-259K16 from 13, complete sequence Length = 207129 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 gtatacatatacatgtatat 199 |||||||||||||||||||| Sbjct: 36664 gtatacatatacatgtatat 36683
>gb|AC126695.4| Mus musculus BAC clone RP23-313D2 from 18, complete sequence Length = 171427 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 155242 tatacatatacatgtatatg 155223
>gb|AF503579.1| Pan troglodytes chromosome 19p, 10.5 kb SmaI fragment of RP43-141Q35, orientation p-telomer to centromere, complete sequence Length = 10497 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 6381 tatacatatacatgtatatg 6362
>gb|AC116329.3| Mus musculus BAC clone RP24-290C19 from 5, complete sequence Length = 170072 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 11693 tatacatatacatgtatatg 11712
>gb|AC121576.2| Mus musculus BAC clone RP23-244D21 from 18, complete sequence Length = 158243 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 77234 tatacatatacatgtatatg 77215
>gb|AC113596.8| Mus musculus chromosome 5, clone RP23-374B20, complete sequence Length = 203500 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 6377 tatacatatacatgtatatg 6358
>gb|AC108392.17| Mus musculus chromosome 10, clone RP23-121B23, complete sequence Length = 207763 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 53928 tatacatatacatgtatatg 53947
>gb|AC159814.2| Mus musculus BAC clone RP23-389H15 from chromosome 12, complete sequence Length = 209280 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 166829 tatacatatacatgtatatg 166810 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 166806 tatacatatacatgtatatg 166825
>gb|AC006507.21| Mus musculus strain 129S6/SvEvTac clone rp21-580p20 map 10, complete sequence Length = 185664 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 45959 tatacatatacatgtatatg 45978
>gb|AC140851.12| Mus musculus strain C57BL/6J clone rp23-358m4, complete sequence Length = 214913 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 33385 tatacatatacatgtatatg 33404
>emb|AL935059.4| Human DNA sequence from clone RP11-691H16 on chromosome X Contains a novel gene, complete sequence Length = 31134 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 gtatacatatacatgtatat 199 |||||||||||||||||||| Sbjct: 9265 gtatacatatacatgtatat 9284 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 gtatacatatacatgtatat 199 |||||||||||||||||||| Sbjct: 9227 gtatacatatacatgtatat 9246 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 gtatacatatacatgtatat 199 |||||||||||||||||||| Sbjct: 9197 gtatacatatacatgtatat 9216 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 gtatacatatacatgtatat 199 |||||||||||||||||||| Sbjct: 9159 gtatacatatacatgtatat 9178 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 gtatacatatacatgtatat 199 |||||||||||||||||||| Sbjct: 9121 gtatacatatacatgtatat 9140
>emb|AL583860.7| Human DNA sequence from clone RP11-16P8 on chromosome 10 Contains the 5' end of a novel gene, complete sequence Length = 87845 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 74513 tatacatatacatgtatatg 74494 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 74490 tatacatatacatgtatatg 74509
>emb|AL355810.10| Human DNA sequence from clone RP11-40E6 on chromosome 13, complete sequence Length = 103749 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 gtatacatatacatgtatat 199 |||||||||||||||||||| Sbjct: 87671 gtatacatatacatgtatat 87690
>emb|AL355588.8| Human DNA sequence from clone RP11-515J13 on chromosome 9, complete sequence Length = 123274 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 gtatacatatacatgtatat 199 |||||||||||||||||||| Sbjct: 102897 gtatacatatacatgtatat 102878
>emb|AL160411.25| Human DNA sequence from clone RP4-726N1 on chromosome 20 Contains the 5' end of the ZNF339 gene for zinc finger protein 339, a novel gene, the RPL15P1 gene for ribosomal protein L15 pseudogene 1 and a CpG island, complete sequence Length = 100834 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 31319 tatacatatacatgtatatg 31300
>emb|AL138920.11| Human DNA sequence from clone RP11-148B2 on chromosome 10 Contains the RAB18 gene for RAB18, member RAS oncogene family and a CpG island, complete sequence Length = 168217 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 gtatacatatacatgtatat 199 |||||||||||||||||||| Sbjct: 27506 gtatacatatacatgtatat 27487 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 gtatacatatacatgtatat 199 |||||||||||||||||||| Sbjct: 27425 gtatacatatacatgtatat 27406
>emb|AL136373.21| Human DNA sequence from clone RP11-49P4 on chromosome 1p32.2-33 Contains two novel genes (FLJ40412, FLJ32011), the MKNK1 gene for MAP kinase-interacting serine/threonine kinase 1, the gene for MOB3C protein (MOB3C) and the 3' end of the ATPAF1 gene for ATP synthase mitochondrial F1 complex assembly factor 1, complete sequence Length = 121112 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 179 ggtatacatatacatgtatatggc 202 |||||||||||| ||||||||||| Sbjct: 12145 ggtatacatataaatgtatatggc 12168
>gb|AC011401.9| Homo sapiens chromosome 5 clone CTB-35K5, complete sequence Length = 199275 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 185107 tatacatatacatgtatatg 185088 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 185084 tatacatatacatgtatatg 185103
>emb|AL121601.13|HSDJ315G1 Human DNA sequence from clone RP1-315G1 on chromosome Xq24-25 Contains the 3' end of the BIRC4 gene for baculoviral IAP repeat-containing 4, two novel genes, a par-6 partitioning defective 6 homolog beta (C. elegans) (PARD6B) pseudogene, the 5' end of the STAG2 gene for stromal antigen 2 and a CpG island, complete sequence Length = 133391 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 atgaatttttgtgtgtgtga 252 |||||||||||||||||||| Sbjct: 73358 atgaatttttgtgtgtgtga 73339
>emb|AL121902.13|HSBA80K6 Human DNA sequence from clone RP11-80K6 on chromosome 20 Contains a novel gene, the RPL36P1 gene for ribosomal protein L36 pseudogene 1, the 5' end of the gene for a novel protein (FLJ33887) and a CpG island, complete sequence Length = 170740 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 gtatacatatacatgtatat 199 |||||||||||||||||||| Sbjct: 57105 gtatacatatacatgtatat 57124
>emb|AL079342.17|HSDJ72A23 Human DNA sequence from clone RP1-72A23 on chromosome 6 Contains an adaptor-related (clathrin-associated) protein complex 4, sigma 1 subunit (AP4A1) pseudogene, a novel pseudogene, the 5' end of the RNGTT gene for RNA guanylyltransferase and 5'-phosphatase (mRNA capping enzyme, CAP1A) and two CpG islands, complete sequence Length = 150541 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 141689 tatacatatacatgtatatg 141670
>emb|AL031661.28|HS404H4 Human DNA sequence from clone RP3-404H4 on chromosome 20q12-13.13 Contains STSs and GSSs, complete sequence Length = 155867 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 96344 tatacatatacatgtatatg 96325
>gb|AC128707.2| Homo sapiens 12 BAC RP11-38F22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 121538 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 102312 tatacatatacatgtatatg 102293 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 102289 tatacatatacatgtatatg 102308 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 102284 tatacatatacatgtatatg 102265 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 102261 tatacatatacatgtatatg 102280 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 102256 tatacatatacatgtatatg 102237 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 102233 tatacatatacatgtatatg 102252 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 102228 tatacatatacatgtatatg 102209 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 102205 tatacatatacatgtatatg 102224 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 102200 tatacatatacatgtatatg 102181 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 102177 tatacatatacatgtatatg 102196
>gb|AC112026.4| Rattus norvegicus 19 BAC CH230-105L11 (Children's Hospital Oakland Research Institute) complete sequence Length = 237539 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 62989 tatacatatacatgtatatg 63008
>emb|AL022324.1|HS246H3 Human DNA sequence from clone CTA-246H3 on chromosome 22, complete sequence Length = 140679 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 4601 tatacatatacatgtatatg 4620
>emb|Z99122.2|BSUB0019 Bacillus subtilis complete genome (section 19 of 21): from 3608981 to 3809670 Length = 200690 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 gcctatgtgcagcaaaccaa 550 |||||||||||||||||||| Sbjct: 125075 gcctatgtgcagcaaaccaa 125094
>emb|Z92952.1|BSZ92952 B.subtilis ywq[A,B,C,D,E,F,G,H,I,J,K,L,M,N,O] genes Length = 14047 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 gcctatgtgcagcaaaccaa 550 |||||||||||||||||||| Sbjct: 1331 gcctatgtgcagcaaaccaa 1312
>emb|AL663049.8| Mouse DNA sequence from clone RP23-198N8 on chromosome 11 Contains the Mor2 gene for soluble malate dehydrogenase, a novel gene, a phosphoglycerate mutase (Pgam) pseudogene and a CpG island, complete sequence Length = 203295 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 gtatacatatacatgtatat 199 |||||||||||||||||||| Sbjct: 133282 gtatacatatacatgtatat 133263
>gb|AC100400.10| Mus musculus chromosome 15, clone RP23-134E16, complete sequence Length = 211743 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 124678 tatacatatacatgtatatg 124659
>gb|AC153539.7| Mus musculus 10 BAC RP23-245C19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 230854 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 106242 tatacatatacatgtatatg 106261
>emb|AL671970.9| Mouse DNA sequence from clone RP23-152A20 on chromosome 4, complete sequence Length = 166569 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 gtatacatatacatgtatat 199 |||||||||||||||||||| Sbjct: 23310 gtatacatatacatgtatat 23291
>emb|BX005114.6| Mouse DNA sequence from clone RP24-199F23 on chromosome 11 no genes, complete sequence Length = 135695 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 97964 tatacatatacatgtatatg 97983
>emb|AL805927.4| Mouse DNA sequence from clone RP24-221D22 on chromosome 4 Contains a novel pseudogene, complete sequence Length = 141669 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 22896 tatacatatacatgtatatg 22915
>emb|CR858827.1| Pongo pygmaeus mRNA; cDNA DKFZp469O2110 (from clone DKFZp469O2110) Length = 6078 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 177 tgggtatacatatacatgtatatg 200 ||||||||||||||||| |||||| Sbjct: 5478 tgggtatacatatacatatatatg 5455
>gb|AC015994.13| Homo sapiens, clone RP11-328A22, complete sequence Length = 163186 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 14298 tatacatatacatgtatatg 14279 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 14275 tatacatatacatgtatatg 14294
>gb|AC107909.5| Homo sapiens chromosome 8, clone CTD-2340D6, complete sequence Length = 149001 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 atacatatacatgtatatgg 201 |||||||||||||||||||| Sbjct: 22956 atacatatacatgtatatgg 22937
>gb|AC156557.8| Mus musculus chromosome 7, clone RP23-321F8, complete sequence Length = 209053 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 gtatacatatacatgtatat 199 |||||||||||||||||||| Sbjct: 156908 gtatacatatacatgtatat 156889
>gb|AC151827.5| Mus musculus BAC clone RP24-453P17 from chromosome y, complete sequence Length = 166980 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 27669 tatacatatacatgtatatg 27650 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 27646 tatacatatacatgtatatg 27665
>gb|AC104986.5| Homo sapiens chromosome 8, clone RP11-410L14, complete sequence Length = 153411 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 atacatatacatgtatatgg 201 |||||||||||||||||||| Sbjct: 9889 atacatatacatgtatatgg 9908
>dbj|BS000574.1| Pan troglodytes chromosome Y clone:PTB-031D23, complete sequences Length = 142928 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 39220 tatacatatacatgtatatg 39201
>gb|AC023916.10| Homo sapiens chromosome , clone RP11-12L20, complete sequence Length = 132446 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 31300 tatacatatacatgtatatg 31319
>gb|AC092952.4| Homo sapiens 3 BAC RP11-332P22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 168234 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 180 gtatacatatacatgtatatggcgtaat 207 |||||||||| ||||||||||| ||||| Sbjct: 127275 gtatacatatgcatgtatatggagtaat 127248
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 16183718 tatacatatacatgtatatg 16183737
>gb|AC061999.6| Homo sapiens chromosome 11, clone RP11-545D22, complete sequence Length = 182549 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 gtatacatatacatgtatat 199 |||||||||||||||||||| Sbjct: 86640 gtatacatatacatgtatat 86621
>gb|AC078862.14| Homo sapiens 12 BAC RP11-139B1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 57000 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 ccaccttcacatgaattttt 242 |||||||||||||||||||| Sbjct: 23108 ccaccttcacatgaattttt 23089
>gb|AC093768.3| Homo sapiens BAC clone RP11-113G13 from 4, complete sequence Length = 187624 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 gccaaggggaagggtgttta 339 |||||||||||||||||||| Sbjct: 65296 gccaaggggaagggtgttta 65315
>gb|AC097492.6| Homo sapiens BAC clone RP11-264A4 from 4, complete sequence Length = 142890 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 43026 tatacatatacatgtatatg 43007
>gb|AC010746.8| Homo sapiens BAC clone RP11-550E21 from 2, complete sequence Length = 229379 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 acatgaatttttgtgtgtgt 250 |||||||||||||||||||| Sbjct: 67041 acatgaatttttgtgtgtgt 67022
>gb|AC021736.9| Homo sapiens chromosome 8, clone RP11-115J16, complete sequence Length = 158806 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 31265 tatacatatacatgtatatg 31284
>gb|AC044891.4| Homo sapiens chromosome 8, clone RP11-624C23, complete sequence Length = 183651 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 80201 tatacatatacatgtatatg 80182
>gb|AC021701.8| Homo sapiens chromosome 18, clone RP11-704G7, complete sequence Length = 170311 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 101552 tatacatatacatgtatatg 101533
>gb|AC020926.8| Homo sapiens chromosome 16 clone CTD-2152G12, complete sequence Length = 93288 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 48192 tatacatatacatgtatatg 48211
>gb|AC008425.6| Homo sapiens chromosome 5 clone CTC-304O9, complete sequence Length = 119579 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 97488 tatacatatacatgtatatg 97469 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 97465 tatacatatacatgtatatg 97484
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ttcaaggaaggcgtcgatgc 306 |||||||||||||||||||| Sbjct: 2504769 ttcaaggaaggcgtcgatgc 2504750
>gb|AC158511.2| Mus musculus BAC clone RP24-242G2 from chromosome 13, complete sequence Length = 143388 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 78266 tatacatatacatgtatatg 78285
>gb|AC159097.5| Mus musculus chromosome 8, clone RP24-310O9, complete sequence Length = 179528 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 18195 tatacatatacatgtatatg 18176
>dbj|AK083570.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030046K16 product:unclassifiable, full insert sequence Length = 2480 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 atatacacaccagaagagtg 405 |||||||||||||||||||| Sbjct: 259 atatacacaccagaagagtg 278
>tpg|BK000964.1| TPA: TPA_exp: Mus musculus ribosomal DNA, complete repeating unit Length = 45309 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 17634 tatacatatacatgtatatg 17615
>dbj|AK044494.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930016I04 product:unclassifiable, full insert sequence Length = 2914 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 1155 tatacatatacatgtatatg 1136 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 1132 tatacatatacatgtatatg 1151
>gb|AC131302.5| Mus musculus chromosome 1, clone RP24-117I22, complete sequence Length = 155098 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 44454 tatacatatacatgtatatg 44473
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 tggcgttcaaggaaggcgtc 301 |||||||||||||||||||| Sbjct: 20071070 tggcgttcaaggaaggcgtc 20071089 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 tggcgttcaaggaaggcgtc 301 |||||||||||||||||||| Sbjct: 19940668 tggcgttcaaggaaggcgtc 19940687
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 2755451 tatacatatacatgtatatg 2755432
>gb|AC010133.4|AC010133 Homo sapiens clone RP11-118E9, complete sequence Length = 152074 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 38808 tatacatatacatgtatatg 38789
>gb|AY696617.1| Pagrus major clone cm002740 microsatellite sequence Length = 734 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 catctttggctctgaaacca 60 |||||||||||||||||||| Sbjct: 389 catctttggctctgaaacca 408
>dbj|AB210421.1| Ciona intestinalis mRNA for transcription factor protein, complete cds, clone: citb004m11 Length = 2001 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 549 aagctatgcaccaaacgatg 568 |||||||||||||||||||| Sbjct: 442 aagctatgcaccaaacgatg 461
>gb|AC156644.2| Pan troglodytes BAC clone CH251-301K8 from chromosome unknown, complete sequence Length = 165832 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 113969 tatacatatacatgtatatg 113950
>gb|AC133521.3| Mus musculus BAC clone RP23-189F22 from chromosome 12, complete sequence Length = 219682 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 gtatacatatacatgtatat 199 |||||||||||||||||||| Sbjct: 60351 gtatacatatacatgtatat 60332
>gb|AC016736.6| Homo sapiens BAC clone RP11-393J17 from 2, complete sequence Length = 149884 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 3562 tatacatatacatgtatatg 3543
>gb|AC011246.6| Homo sapiens BAC clone RP11-498O20 from 2, complete sequence Length = 220183 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 168172 tatacatatacatgtatatg 168153
>gb|AC069018.17|AC069018 Mus musculus BAC MGS3-563C15 (Genome Systems Mouse BAC Library) complete sequence Length = 157665 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 47076 tatacatatacatgtatatg 47057 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 47053 tatacatatacatgtatatg 47072
>dbj|AP003334.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1114B07 Length = 148060 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 59429 tatacatatacatgtatatg 59410
>gb|AC010737.4|AC010737 Homo sapiens BAC clone RP11-439L24 from Y, complete sequence Length = 70204 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 gtatacatatacatgtatat 199 |||||||||||||||||||| Sbjct: 16053 gtatacatatacatgtatat 16034
>gb|AC136777.8| Homo sapiens chromosome 8, clone RP11-63E5, complete sequence Length = 175263 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 gtatacatatacatgtatat 199 |||||||||||||||||||| Sbjct: 158758 gtatacatatacatgtatat 158777
>gb|AC136003.10| Mus musculus chromosome 15, clone RP23-191C24, complete sequence Length = 214651 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 gtatacatatacatgtatat 199 |||||||||||||||||||| Sbjct: 206260 gtatacatatacatgtatat 206279
>dbj|AP006554.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0529C07 Length = 174011 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 167198 tatacatatacatgtatatg 167179
>dbj|BS000098.1| Pan troglodytes chromosome 22 clone:CH251-269G16, map 22, complete sequences Length = 44745 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 gtatacatatacatgtatat 199 |||||||||||||||||||| Sbjct: 27839 gtatacatatacatgtatat 27820
>dbj|AK119422.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-132-H02, full insert sequence Length = 3198 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 tggcgttcaaggaaggcgtc 301 |||||||||||||||||||| Sbjct: 221 tggcgttcaaggaaggcgtc 240
>gb|AC123644.8| Mus musculus chromosome 15, clone RP23-85G7, complete sequence Length = 186827 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 29262 tatacatatacatgtatatg 29243 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 29239 tatacatatacatgtatatg 29258
>gb|AC004552.1|AC004552 Homo sapiens Xp22 BAC GSHB-184P14 (Genome Systems Human BAC library) complete sequence Length = 137271 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 91470 tatacatatacatgtatatg 91489
>gb|AC145042.3| Macropus eugenii clone ME_KBa-289E24, complete sequence Length = 161181 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 114617 tatacatatacatgtatatg 114598 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 114594 tatacatatacatgtatatg 114613
>gb|AC005875.2|AC005875 citb_188_b_12, complete sequence Length = 131535 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 gtatacatatacatgtatat 199 |||||||||||||||||||| Sbjct: 128950 gtatacatatacatgtatat 128931 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 gtatacatatacatgtatat 199 |||||||||||||||||||| Sbjct: 128869 gtatacatatacatgtatat 128850
>gb|AC154300.2| Mus musculus BAC clone RP23-390F4 from 12, complete sequence Length = 187014 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 ctcttcttgtctacagtact 511 |||||||||||||||||||| Sbjct: 166412 ctcttcttgtctacagtact 166431
>gb|AC122122.14| Mus musculus chromosome 1, clone RP23-15D21, complete sequence Length = 204416 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 129095 tatacatatacatgtatatg 129114
>gb|AC007421.12|AC007421 Homo sapiens chromosome 17, clone hRPC.1030_O_14, complete sequence Length = 95240 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 gtatacatatacatgtatat 199 |||||||||||||||||||| Sbjct: 62218 gtatacatatacatgtatat 62237 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 gtatacatatacatgtatat 199 |||||||||||||||||||| Sbjct: 62194 gtatacatatacatgtatat 62213 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 gtatacatatacatgtatat 199 |||||||||||||||||||| Sbjct: 62168 gtatacatatacatgtatat 62187 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 gtatacatatacatgtatat 199 |||||||||||||||||||| Sbjct: 62142 gtatacatatacatgtatat 62161
>gb|AE003654.3| Drosophila melanogaster chromosome 2L, section 63 of 83 of the complete sequence Length = 258558 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 tacatatacatgtatatggc 202 |||||||||||||||||||| Sbjct: 67551 tacatatacatgtatatggc 67532
>dbj|AP000904.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-702B10, complete sequence Length = 175904 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 78756 tatacatatacatgtatatg 78737 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 78733 tatacatatacatgtatatg 78752
>dbj|AP001689.1| Homo sapiens genomic DNA, chromosome 21q, section 33/105 Length = 340000 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 162955 tatacatatacatgtatatg 162936
>dbj|AP001681.1| Homo sapiens genomic DNA, chromosome 21q, section 25/105 Length = 340000 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 gtatacatatacatgtatat 199 |||||||||||||||||||| Sbjct: 178676 gtatacatatacatgtatat 178657
>gb|AC131033.7| Mus musculus chromosome 15, clone RP23-350J23, complete sequence Length = 219579 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 179086 tatacatatacatgtatatg 179105
>gb|AC158400.3| Pan troglodytes BAC clone CH251-530D15 from chromosome unknown, complete sequence Length = 205243 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 54148 tatacatatacatgtatatg 54129
>gb|AC134793.10| Mus musculus chromosome 15, clone RP23-159M8, complete sequence Length = 216860 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 gtatacatatacatgtatat 199 |||||||||||||||||||| Sbjct: 117751 gtatacatatacatgtatat 117732
>gb|AC115771.13| Mus musculus chromosome 19, clone RP23-116D4, complete sequence Length = 209515 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 72769 tatacatatacatgtatatg 72750 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 72746 tatacatatacatgtatatg 72765
>gb|AC157763.2| Pan troglodytes BAC clone CH251-340C15 from chromosome unknown, complete sequence Length = 198239 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 8368 tatacatatacatgtatatg 8387
>gb|AC109168.10| Mus musculus chromosome 19, clone RP23-480L24, complete sequence Length = 190309 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 29753 tatacatatacatgtatatg 29772
>dbj|AK116021.1| Ciona intestinalis cDNA, clone:citb004m11, full insert sequence Length = 2001 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 549 aagctatgcaccaaacgatg 568 |||||||||||||||||||| Sbjct: 442 aagctatgcaccaaacgatg 461
>gb|U96100.1|SSU96100 Sus scrofa immunoglobulin E epsilon chain precursor, mRNA, complete cds Length = 1885 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 260 cttgtagggcctggtggtggagtg 283 ||||| |||||||||||||||||| Sbjct: 1587 cttgtggggcctggtggtggagtg 1564
>gb|AC115018.7| Mus musculus chromosome 3, clone RP24-221D2, complete sequence Length = 164720 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 152253 tatacatatacatgtatatg 152272
>emb|AL591936.12| Mouse DNA sequence from clone RP23-28B10 on chromosome 2, complete sequence Length = 147431 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 101293 tatacatatacatgtatatg 101274 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 101270 tatacatatacatgtatatg 101289
>emb|AL844212.8| Mouse DNA sequence from clone RP23-29B20 on chromosome 4, complete sequence Length = 215351 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 122447 tatacatatacatgtatatg 122466
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 tggcgttcaaggaaggcgtc 301 |||||||||||||||||||| Sbjct: 20357746 tggcgttcaaggaaggcgtc 20357765 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 tggcgttcaaggaaggcgtc 301 |||||||||||||||||||| Sbjct: 20225647 tggcgttcaaggaaggcgtc 20225666
>gb|AC155158.15| Mus musculus chromosome 3, clone RP24-70L3, complete sequence Length = 240767 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 117828 tatacatatacatgtatatg 117809
>emb|AL928893.10| Mouse DNA sequence from clone RP23-55I14 on chromosome 2, complete sequence Length = 235241 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 128162 tatacatatacatgtatatg 128181
>gb|AC005181.1|AC005181 Homo sapiens chromosome 17, clone hRPK.1003_J_3, complete sequence Length = 202763 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 atacatatacatgtatatgg 201 |||||||||||||||||||| Sbjct: 15940 atacatatacatgtatatgg 15921
>gb|AC147184.3| Mus musculus BAC clone RP24-286F20 from 1, complete sequence Length = 176857 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 88641 tatacatatacatgtatatg 88660
>emb|CT030664.5| Mouse DNA sequence from clone RP23-357K7 on chromosome 13, complete sequence Length = 192064 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 136937 tatacatatacatgtatatg 136956
>gb|AC150648.2| Mus musculus BAC clone RP23-235N5 from 7, complete sequence Length = 190414 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 accatcttcctctcctctgt 76 |||||||||||||||||||| Sbjct: 170288 accatcttcctctcctctgt 170269
>emb|CR354395.20| Zebrafish DNA sequence from clone DKEYP-45G11 in linkage group 12, complete sequence Length = 160211 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tgaatttttgtgtgtgtgag 253 |||||||||||||||||||| Sbjct: 157571 tgaatttttgtgtgtgtgag 157552
>dbj|AP005597.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-72M10, complete sequence Length = 163324 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 115339 tatacatatacatgtatatg 115320
>gb|AC162912.5| Mus musculus BAC clone RP24-381G1 from chromosome 13, complete sequence Length = 190181 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 158573 tatacatatacatgtatatg 158554
>gb|AC158166.2| Mus musculus BAC clone RP23-339K21 from chromosome 16, complete sequence Length = 194274 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 gtatacatatacatgtatat 199 |||||||||||||||||||| Sbjct: 188757 gtatacatatacatgtatat 188738
>gb|AC164566.3| Mus musculus BAC clone RP23-94P17 from chromosome 16, complete sequence Length = 203314 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 gtatacatatacatgtatat 199 |||||||||||||||||||| Sbjct: 69941 gtatacatatacatgtatat 69960
>emb|AL732410.6| Mouse DNA sequence from clone RP23-91L2 on chromosome X, complete sequence Length = 220894 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 218424 tatacatatacatgtatatg 218405
>emb|AL928871.5| Mouse DNA sequence from clone RP23-350F2 on chromosome 2, complete sequence Length = 133330 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 gtatacatatacatgtatat 199 |||||||||||||||||||| Sbjct: 129803 gtatacatatacatgtatat 129822
>emb|AL773582.6| Mouse DNA sequence from clone RP23-174J23 on chromosome 2, complete sequence Length = 206309 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 gtatacatatacatgtatat 199 |||||||||||||||||||| Sbjct: 90519 gtatacatatacatgtatat 90538
>emb|AL671493.12| Mouse DNA sequence from clone RP23-105O4 on chromosome X, complete sequence Length = 220631 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 136953 tatacatatacatgtatatg 136934
>gb|AC130656.11| Mus musculus chromosome 15, clone RP23-305M4, complete sequence Length = 185933 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 34062 tatacatatacatgtatatg 34081
>emb|AL133167.4|CNS01DU1 Human chromosome 14 DNA sequence BAC R-185P18 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 163096 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 24811 tatacatatacatgtatatg 24792
>gb|AC090043.2| Homo sapiens chromosome 3 clone RP11-551L4 map 3p, complete sequence Length = 173854 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 gtatacatatacatgtatat 199 |||||||||||||||||||| Sbjct: 163547 gtatacatatacatgtatat 163566
>dbj|AP000477.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:P494A8, LL56-APP region, complete sequence Length = 108432 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 104417 tatacatatacatgtatatg 104398
>dbj|AP004294.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1651H12 Length = 180236 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 atacatatacatgtatatgg 201 |||||||||||||||||||| Sbjct: 60982 atacatatacatgtatatgg 60963
>dbj|AP001137.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, LL56-APP region, clone:B812P3 Length = 203959 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 gtatacatatacatgtatat 199 |||||||||||||||||||| Sbjct: 43017 gtatacatatacatgtatat 42998
>emb|AL355005.3| Mouse DNA sequence from clone RP21-429M4 on chromosome X, complete sequence Length = 140069 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tatacatatacatgtatatg 200 |||||||||||||||||||| Sbjct: 74173 tatacatatacatgtatatg 74192 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,560,448 Number of Sequences: 3902068 Number of extensions: 6560448 Number of successful extensions: 228139 Number of sequences better than 10.0: 233 Number of HSP's better than 10.0 without gapping: 235 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 226267 Number of HSP's gapped (non-prelim): 1864 length of query: 641 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 618 effective length of database: 17,143,297,704 effective search space: 10594557981072 effective search space used: 10594557981072 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
