ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd26g13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_470955.1| Oryza sativa (japonica cultivar-group), predic... 143 7e-31
2gb|AY106961.1| Zea mays PCO078813 mRNA sequence 129 1e-26
3gb|AY106065.1| Zea mays PCO096468 mRNA sequence 121 3e-24
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 78 3e-11
5emb|AL606442.3|OSJN00014 Oryza sativa genomic DNA, chromosome 4,... 78 3e-11
6ref|NM_104608.2| Arabidopsis thaliana unknown protein AT1G58280 ... 50 0.008
7ref|NM_179495.1| Arabidopsis thaliana catalytic AT1G58280 transc... 50 0.008
8dbj|AB028195.1| Arabidopsis thaliana ZW10 mRNA, partial cds 50 0.008
9emb|Z68295.1|CEC07C7 Caenorhabditis elegans Cosmid C07C7, comple... 46 0.12
10gb|DQ191053.1| Glycine max clone DD4.6 SP-3 mRNA, complete cds 44 0.48
11gb|AY004241.1| Glycine max phosphoglycerate mutase-like protein ... 44 0.48
12gb|AY004240.1| Glycine max phosphoglycerate mutase-like protein ... 44 0.48
13gb|AC158979.2| Mus musculus BAC clone RP23-218C24 from chromosom... 44 0.48
14gb|AF332862.1|AF332859S2 Mus musculus diadenosine triphosphate h... 44 0.48
15gb|AC116694.9| Mus musculus chromosome 7, clone RP24-386G12, com... 42 1.9
16gb|AC135354.3| Mus musculus BAC clone RP24-479J1 from chromosome... 42 1.9
17dbj|AB005247.2| Arabidopsis thaliana genomic DNA, chromosome 5, ... 42 1.9
18gb|AC162942.5| Mus musculus BAC clone RP23-80K12 from chromosome... 40 7.5
19gb|AC167722.2| Mus musculus BAC clone RP23-71L2 from chromosome ... 40 7.5
20gb|AC161818.3| Mus musculus BAC clone RP23-198H15 from chromosom... 40 7.5
21ref|XM_580505.2| PREDICTED: Bos taurus similar to transmembrane ... 40 7.5
22gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, comp... 40 7.5
23ref|XM_986789.1| PREDICTED: Mus musculus hypothetical protein LO... 40 7.5
24ref|XM_986370.1| PREDICTED: Mus musculus hypothetical protein LO... 40 7.5
25gb|AC124429.4| Mus musculus BAC clone RP24-239N4 from chromosome... 40 7.5
26gb|AC121874.2| Mus musculus BAC clone RP24-124K16 from 18, compl... 40 7.5
27ref|XM_783542.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 7.5
28emb|AL133388.7| Human DNA sequence from clone RP1-257B21 on chro... 40 7.5
29ref|XM_793751.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 7.5
30gb|AC140467.4| Mus musculus BAC clone RP24-393I9 from chromosome... 40 7.5
31gb|AY664414.1| Zea mays cultivar B73 locus 9008, complete sequence 40 7.5
32gb|AC174797.2| Mus musculus BAC clone RP24-216A12 from chromosom... 40 7.5
33gb|AC136642.4| Mus musculus BAC clone RP23-401J21 from 14, compl... 40 7.5
34gb|AC164114.2| Mus musculus BAC clone RP24-576O9 from chromosome... 40 7.5
35dbj|AP003775.3| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 7.5 
>ref|XM_470955.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 828

 Score =  143 bits (72), Expect = 7e-31
 Identities = 150/177 (84%)
 Strand = Plus / Plus

                                                                       
Query: 369 agtttgaactgcccaccgtttcttgcacttgaggcctgcagggagcagttgagtgttctt 428
           ||||||||||||||||||||||||||  ||||||||||||||||||| ||| |||| | |
Sbjct: 364 agtttgaactgcccaccgtttcttgcttttgaggcctgcagggagcacttgggtgtgcat 423

                                                                       
Query: 429 acctctgacaagaggagcagcntaacaagataccgtactctctttcctgccattgatttt 488
            ||| ||| || ||||| ||| | |||  |||||   |||||||||||||||||||||||
Sbjct: 424 ccctgtgataaaaggaggagcattacagaataccacgctctctttcctgccattgatttt 483

                                                                    
Query: 489 tccttgatagagaatgatgaagatgttctttggggacccnangtcatagaaccaaat 545
           ||  |||||||||||||||||||||| ||||||| |||  | |||| |||| |||||
Sbjct: 484 tcgctgatagagaatgatgaagatgtactttgggaaccaaatgtcagagaagcaaat 540



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 130/164 (79%)
 Strand = Plus / Plus

                                                                       
Query: 160 tgggctggagccaagttgattgcctgcgagagcatgtggcgaaatgtggactagcnnnnn 219
           ||||||||| ||||||||| |||||||| ||||| |||   ||| ||||||| ||     
Sbjct: 158 tgggctggaaccaagttgactgcctgcgtgagcacgtgaaaaaaagtggacttgcacaaa 217

                                                                       
Query: 220 nnnttgagttggttattgtttnccctctaatgaggactctgcagactgcagtgggggtct 279
              ||||| ||||||||  || ||||||| |||||||| |||| |||||||| |||||||
Sbjct: 218 agattgagctggttattacttcccctctactgaggactatgcaaactgcagtcggggtct 277

                                                       
Query: 280 ttggcggtggaagctgtactgatggagaaagtacatcaccatta 323
           |||| |||| || || |  |||||||| |||| || ||||||||
Sbjct: 278 ttgggggtgaaaactctgttgatggagtaagtgcaccaccatta 321



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                       
Query: 42  caccgatgcaaaaccgtgtacctggngaggcatgcccagggtcttcacaacgcggaagaa 101
           ||||| ||||||||| | |||||||  ||||||||||||||| ||||||| | |||||  
Sbjct: 40  caccgctgcaaaaccatctacctggtcaggcatgcccagggtgttcacaatgtggaaggc 99

                    
Query: 102 gagaaggat 110
           |||||||||
Sbjct: 100 gagaaggat 108
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>gb|AY106961.1| Zea mays PCO078813 mRNA sequence
          Length = 1308

 Score =  129 bits (65), Expect = 1e-26
 Identities = 133/156 (85%)
 Strand = Plus / Plus

                                                                       
Query: 367 caagtttgaactgcccaccgtttcttgcacttgaggcctgcagggagcagttgagtgttc 426
           |||||||||||||||| || ||| ||||| ||||  ||||||| ||||| ||| |||| |
Sbjct: 513 caagtttgaactgccccccatttattgcagttgaaacctgcagagagcacttgggtgtcc 572

                                                                       
Query: 427 ttacctctgacaagaggagcagcntaacaagataccgtactctctttcctgccattgatt 486
            | | | |||||||||||| ||| |||||  ||||||  ||||||| |||||||||||||
Sbjct: 573 atccatgtgacaagaggaggagcataacagaataccggcctctcttccctgccattgatt 632

                                               
Query: 487 tttccttgatagagaatgatgaagatgttctttggg 522
           |||| |||||||||||||||| ||||||||||||||
Sbjct: 633 tttcattgatagagaatgatggagatgttctttggg 668
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>gb|AY106065.1| Zea mays PCO096468 mRNA sequence
          Length = 1347

 Score =  121 bits (61), Expect = 3e-24
 Identities = 132/156 (84%)
 Strand = Plus / Plus

                                                                       
Query: 367 caagtttgaactgcccaccgtttcttgcacttgaggcctgcagggagcagttgagtgttc 426
           ||||||||||||||||||| ||||||||  ||||||||||||||||||  ||| |||| |
Sbjct: 519 caagtttgaactgcccaccatttcttgctgttgaggcctgcagggagcgcttgggtgtcc 578

                                                                       
Query: 427 ttacctctgacaagaggagcagcntaacaagataccgtactctctttcctgccattgatt 486
            | | | |||||||||||| ||| | |||   |||||| ||||||| |||||||||||||
Sbjct: 579 atccttgtgacaagaggaggagcatcacagagtaccgtgctctcttccctgccattgatt 638

                                               
Query: 487 tttccttgatagagaatgatgaagatgttctttggg 522
           ||||  ||||||||| ||| ||||||||||| ||||
Sbjct: 639 tttcgctgatagagagtgacgaagatgttctctggg 674



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                      
Query: 41  gcaccgatgcaaaaccgtgtacctggngaggcatgcccagggtcttcacaacgcggaag 99
           |||||||||||||||| |  |||||| |||||||||||| ||| | ||||||| |||||
Sbjct: 205 gcaccgatgcaaaaccatacacctggtgaggcatgcccaaggtgtccacaacgtggaag 263
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4,
              complete sequence
          Length = 35498469

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 45/47 (95%)
 Strand = Plus / Plus

                                                             
Query: 369    agtttgaactgcccaccgtttcttgcacttgaggcctgcagggagca 415
              ||||||||||||||||||||||||||  |||||||||||||||||||
Sbjct: 170609 agtttgaactgcccaccgtttcttgcttttgaggcctgcagggagca 170655



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                                  
Query: 494    gatagagaatgatgaagatgttctttggggacccnangtcatagaaccaaat 545
              ||||||||||||||||||||| ||||||| |||  | |||| |||| |||||
Sbjct: 171111 gatagagaatgatgaagatgtactttgggaaccaaatgtcagagaagcaaat 171162



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                       
Query: 466    ctctctttcctgccattgatttttc 490
              |||||||||||||||||||||||||
Sbjct: 170971 ctctctttcctgccattgatttttc 170995



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 60/72 (83%)
 Strand = Plus / Plus

                                                                          
Query: 252    aggactctgcagactgcagtgggggtctttggcggtggaagctgtactgatggagaaagt 311
              |||||| |||| |||||||| ||||||||||| |||| || || |  |||||||| ||||
Sbjct: 170495 aggactatgcaaactgcagtcggggtctttgggggtgaaaactctgttgatggagtaagt 170554

                          
Query: 312    acatcaccatta 323
               || ||||||||
Sbjct: 170555 gcaccaccatta 170566



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                        
Query: 69     aggcatgcccagggtcttcacaacgcggaagaagagaaggat 110
              ||||||||||||||| ||||||| | |||||  |||||||||
Sbjct: 168593 aggcatgcccagggtgttcacaatgtggaaggcgagaaggat 168634
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>emb|AL606442.3|OSJN00014 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0068L06,
              complete sequence
          Length = 145517

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 45/47 (95%)
 Strand = Plus / Plus

                                                             
Query: 369    agtttgaactgcccaccgtttcttgcacttgaggcctgcagggagca 415
              ||||||||||||||||||||||||||  |||||||||||||||||||
Sbjct: 101896 agtttgaactgcccaccgtttcttgcttttgaggcctgcagggagca 101942



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                                  
Query: 494    gatagagaatgatgaagatgttctttggggacccnangtcatagaaccaaat 545
              ||||||||||||||||||||| ||||||| |||  | |||| |||| |||||
Sbjct: 102398 gatagagaatgatgaagatgtactttgggaaccaaatgtcagagaagcaaat 102449



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                       
Query: 466    ctctctttcctgccattgatttttc 490
              |||||||||||||||||||||||||
Sbjct: 102258 ctctctttcctgccattgatttttc 102282



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 60/72 (83%)
 Strand = Plus / Plus

                                                                          
Query: 252    aggactctgcagactgcagtgggggtctttggcggtggaagctgtactgatggagaaagt 311
              |||||| |||| |||||||| ||||||||||| |||| || || |  |||||||| ||||
Sbjct: 101782 aggactatgcaaactgcagtcggggtctttgggggtgaaaactctgttgatggagtaagt 101841

                          
Query: 312    acatcaccatta 323
               || ||||||||
Sbjct: 101842 gcaccaccatta 101853



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                       
Query: 69    aggcatgcccagggtcttcacaacgcggaagaagagaaggat 110
             ||||||||||||||| ||||||| | |||||  |||||||||
Sbjct: 99880 aggcatgcccagggtgttcacaatgtggaaggcgagaaggat 99921
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>ref|NM_104608.2| Arabidopsis thaliana unknown protein AT1G58280 transcript variant
           AT1G58280.1 mRNA, complete cds
          Length = 1068

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 474 cctgccattgatttttccttgatagagaatgatgaagatgt 514
           ||||| ||||||||||| |||||||| | ||||||||||||
Sbjct: 537 cctgcgattgatttttcattgatagaaactgatgaagatgt 577
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>ref|NM_179495.1| Arabidopsis thaliana catalytic AT1G58280 transcript variant
           AT1G58280.2 mRNA, complete cds
          Length = 1183

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 474 cctgccattgatttttccttgatagagaatgatgaagatgt 514
           ||||| ||||||||||| |||||||| | ||||||||||||
Sbjct: 652 cctgcgattgatttttcattgatagaaactgatgaagatgt 692
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>dbj|AB028195.1| Arabidopsis thaliana ZW10 mRNA, partial cds
          Length = 1066

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 474 cctgccattgatttttccttgatagagaatgatgaagatgt 514
           ||||| ||||||||||| |||||||| | ||||||||||||
Sbjct: 537 cctgcgattgatttttcattgatagaaactgatgaagatgt 577
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>emb|Z68295.1|CEC07C7 Caenorhabditis elegans Cosmid C07C7, complete sequence
          Length = 21944

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 458  ataccgtactctctttcctgcca 480
            |||||||||||||||||||||||
Sbjct: 7688 ataccgtactctctttcctgcca 7710
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>gb|DQ191053.1| Glycine max clone DD4.6 SP-3 mRNA, complete cds
          Length = 534

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 471 tttcctgccattgatttttccttgatagagaatgatga 508
           ||||| || ||||||||||| |||||||| ||||||||
Sbjct: 56  tttccagctattgatttttcattgatagaaaatgatga 93
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>gb|AY004241.1| Glycine max phosphoglycerate mutase-like protein (PGM) mRNA,
           complete cds
          Length = 1040

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 471 tttcctgccattgatttttccttgatagagaatgatga 508
           ||||| || ||||||||||| |||||||| ||||||||
Sbjct: 526 tttccagctattgatttttcattgatagaaaatgatga 563
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>gb|AY004240.1| Glycine max phosphoglycerate mutase-like protein (PGM) mRNA,
           complete cds
          Length = 1150

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 471 tttcctgccattgatttttccttgatagagaatgatga 508
           ||||| || ||||||||||| |||||||| ||||||||
Sbjct: 553 tttccagctattgatttttcattgatagaaaatgatga 590
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>gb|AC158979.2| Mus musculus BAC clone RP23-218C24 from chromosome 14, complete sequence
          Length = 216848

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 470    ctttcctgccattgatttttcc 491
              ||||||||||||||||||||||
Sbjct: 124000 ctttcctgccattgatttttcc 124021
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>gb|AF332862.1|AF332859S2 Mus musculus diadenosine triphosphate hydrolase (Fhit) gene, intron 5,
             partial sequence
          Length = 166617

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 470   ctttcctgccattgatttttcc 491
             ||||||||||||||||||||||
Sbjct: 23643 ctttcctgccattgatttttcc 23664
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>gb|AC116694.9| Mus musculus chromosome 7, clone RP24-386G12, complete sequence
          Length = 195638

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 144  gcccaactcacccctctgggctgga 168
            |||||||||| ||||||||||||||
Sbjct: 3748 gcccaactcaaccctctgggctgga 3724
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>gb|AC135354.3| Mus musculus BAC clone RP24-479J1 from chromosome 7, complete sequence
          Length = 192640

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 144   gcccaactcacccctctgggctgga 168
             |||||||||| ||||||||||||||
Sbjct: 38874 gcccaactcaaccctctgggctgga 38898
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>dbj|AB005247.2| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MXA21
          Length = 87841

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 481   ttgatttttccttgatagaga 501
             |||||||||||||||||||||
Sbjct: 74049 ttgatttttccttgatagaga 74069
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>gb|AC162942.5| Mus musculus BAC clone RP23-80K12 from chromosome 14, complete sequence
          Length = 227944

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 95     ggaagaagagaaggatgttgtaga 118
              ||||||||||||||||| ||||||
Sbjct: 153381 ggaagaagagaaggatgatgtaga 153358
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>gb|AC167722.2| Mus musculus BAC clone RP23-71L2 from chromosome 14, complete sequence
          Length = 233679

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 95    ggaagaagagaaggatgttgtaga 118
             ||||||||||||||||| ||||||
Sbjct: 66146 ggaagaagagaaggatgatgtaga 66123
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>gb|AC161818.3| Mus musculus BAC clone RP23-198H15 from chromosome 14, complete sequence
          Length = 194224

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 95     ggaagaagagaaggatgttgtaga 118
              ||||||||||||||||| ||||||
Sbjct: 102825 ggaagaagagaaggatgatgtaga 102848
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>ref|XM_580505.2| PREDICTED: Bos taurus similar to transmembrane protein 25
           (LOC504393), mRNA
          Length = 2542

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 403 cctgcagggagcagttgagt 422
           ||||||||||||||||||||
Sbjct: 616 cctgcagggagcagttgagt 597
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>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 396     cttgaggcctgcagggagcagttg 419
               |||||||||||||||| |||||||
Sbjct: 1297586 cttgaggcctgcagggcgcagttg 1297609
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>ref|XM_986789.1| PREDICTED: Mus musculus hypothetical protein LOC666884 (LOC666884),
           mRNA
          Length = 462

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 95  ggaagaagagaaggatgttgtaga 118
           ||||||||||||||||| ||||||
Sbjct: 105 ggaagaagagaaggatgatgtaga 128
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>ref|XM_986370.1| PREDICTED: Mus musculus hypothetical protein LOC666833 (LOC666833),
           mRNA
          Length = 459

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 95  ggaagaagagaaggatgttgtaga 118
           ||||||||||||||||| ||||||
Sbjct: 105 ggaagaagagaaggatgatgtaga 128
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>gb|AC124429.4| Mus musculus BAC clone RP24-239N4 from chromosome 13, complete sequence
          Length = 168858

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 299   tgatggagaaagtacatcac 318
             ||||||||||||||||||||
Sbjct: 82778 tgatggagaaagtacatcac 82759
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>gb|AC121874.2| Mus musculus BAC clone RP24-124K16 from 18, complete sequence
          Length = 164190

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 314   atcaccattactgatggtag 333
             ||||||||||||||||||||
Sbjct: 85989 atcaccattactgatggtag 85970
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>ref|XM_783542.1| PREDICTED: Strongylocentrotus purpuratus similar to
           deoxyribonuclease I-like 3 (LOC583640), partial mRNA
          Length = 319

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 330 gtagaaggtgcagaaaacag 349
           ||||||||||||||||||||
Sbjct: 317 gtagaaggtgcagaaaacag 298
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>emb|AL133388.7| Human DNA sequence from clone RP1-257B21 on chromosome 6q11.1-13
             Contains part of the COL19A1 gene for collagen XIX alpha 1
             and a ribosomal protein L37 (RPL37) pseudogene, complete
             sequence
          Length = 88428

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 250   tgaggactctgcagactgca 269
             ||||||||||||||||||||
Sbjct: 67828 tgaggactctgcagactgca 67809
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>ref|XM_793751.1| PREDICTED: Strongylocentrotus purpuratus similar to
           Deoxyribonuclease-1 precursor (Deoxyribonuclease I)
           (DNase I) (LOC594304), mRNA
          Length = 846

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 330 gtagaaggtgcagaaaacag 349
           ||||||||||||||||||||
Sbjct: 434 gtagaaggtgcagaaaacag 415
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>gb|AC140467.4| Mus musculus BAC clone RP24-393I9 from chromosome 14, complete sequence
          Length = 155495

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 95    ggaagaagagaaggatgttgtaga 118
             ||||||||||||||||| ||||||
Sbjct: 91305 ggaagaagagaaggatgatgtaga 91328
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>gb|AY664414.1| Zea mays cultivar B73 locus 9008, complete sequence
          Length = 339089

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 493    tgatagagaatgatgaagat 512
              ||||||||||||||||||||
Sbjct: 327488 tgatagagaatgatgaagat 327469
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>gb|AC174797.2| Mus musculus BAC clone RP24-216A12 from chromosome 14, complete
             sequence
          Length = 192682

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 95    ggaagaagagaaggatgttgtaga 118
             ||||||||||||||||| ||||||
Sbjct: 87530 ggaagaagagaaggatgatgtaga 87553
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>gb|AC136642.4| Mus musculus BAC clone RP23-401J21 from 14, complete sequence
          Length = 168250

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 95     ggaagaagagaaggatgttgtaga 118
              ||||||||||||||||| ||||||
Sbjct: 111112 ggaagaagagaaggatgatgtaga 111089
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>gb|AC164114.2| Mus musculus BAC clone RP24-576O9 from chromosome 14, complete sequence
          Length = 182232

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 95     ggaagaagagaaggatgttgtaga 118
              ||||||||||||||||| ||||||
Sbjct: 160339 ggaagaagagaaggatgatgtaga 160316
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>dbj|AP003775.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-206H19, complete
             sequences
          Length = 179680

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 471   tttcctgccattgatttttc 490
             ||||||||||||||||||||
Sbjct: 63409 tttcctgccattgatttttc 63390


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,204,698
Number of Sequences: 3902068
Number of extensions: 4204698
Number of successful extensions: 81423
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81312
Number of HSP's gapped (non-prelim): 109
length of query: 555
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 532
effective length of database: 17,143,297,704
effective search space: 9120234378528
effective search space used: 9120234378528
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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