| Clone Name | basd26g05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC115040.7| Mus musculus chromosome 7, clone RP24-281E19, complete sequence Length = 172117 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 565 actgcccttgaaatttcctat 585 ||||||||||||||||||||| Sbjct: 66832 actgcccttgaaatttcctat 66812
>gb|AC158633.7| Mus musculus 10 BAC RP23-407I4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 206282 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 85 aacataaattctaatgcttaaaatggcgt 113 ||||||||||||||| |||||||||||| Sbjct: 22489 aacataaattctaatttttaaaatggcgt 22461
>emb|AL645609.21| Mouse DNA sequence from clone RP23-432O10 on chromosome 11 Contains the 5' end of the Spred2 gene for sprouty protein with EVH-1 domain 2, related sequence and two CpG islands, complete sequence Length = 121493 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 696 tgcattctcatttgagccataatct 720 ||||||||| ||||||||||||||| Sbjct: 2699 tgcattctcttttgagccataatct 2723
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 267 cagcagcgcatcgacgacgac 287 ||||||||||||||||||||| Sbjct: 3284846 cagcagcgcatcgacgacgac 3284866
>emb|BX088526.6| Zebrafish DNA sequence from clone CH211-51H9 in linkage group 8, complete sequence Length = 187161 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 ataaaaaccaaactgtccaaa 86 ||||||||||||||||||||| Sbjct: 174663 ataaaaaccaaactgtccaaa 174643
>emb|AL358293.4|CNS05TE0 Human chromosome 14 DNA sequence BAC R-398E10 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 197927 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 483 atcaagaccgtgtggacacaa 503 ||||||||||||||||||||| Sbjct: 65254 atcaagaccgtgtggacacaa 65234
>emb|AL844561.5| Mouse DNA sequence from clone RP23-214D2 on chromosome 2, complete sequence Length = 203361 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 291 atatttcacagctctagcatc 311 ||||||||||||||||||||| Sbjct: 198145 atatttcacagctctagcatc 198165 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,744,677 Number of Sequences: 3902068 Number of extensions: 5744677 Number of successful extensions: 97441 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 97407 Number of HSP's gapped (non-prelim): 34 length of query: 753 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 730 effective length of database: 17,143,297,704 effective search space: 12514607323920 effective search space used: 12514607323920 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 21 (42.1 bits)