| Clone Name | basd26g04 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | HAIR_MOUSE (Q61645) Protein hairless | 31 | 3.0 | 2 | ILVD1_BRAJA (Q89LK8) Dihydroxy-acid dehydratase 1 (EC 4.2.1.9) (... | 29 | 8.8 | 3 | ILVD_XYLFT (Q87F63) Dihydroxy-acid dehydratase (EC 4.2.1.9) (DAD) | 29 | 8.8 | 4 | ILVD_XYLFA (Q9PH47) Dihydroxy-acid dehydratase (EC 4.2.1.9) (DAD) | 29 | 8.8 |
|---|
>HAIR_MOUSE (Q61645) Protein hairless| Length = 1182 Score = 30.8 bits (68), Expect = 3.0 Identities = 19/54 (35%), Positives = 26/54 (48%) Frame = -1 Query: 236 PLASQTMLGIASGGSIKQGTEKRSPNPQRQHLTKHRRDRV*PTTSGSTGNGARR 75 PLA MLG+A GG ++Q E P + H+RD G TG G ++ Sbjct: 220 PLAESGMLGLAPGGHLQQACESEGP-------SLHQRD-------GETGAGRQQ 259
>ILVD1_BRAJA (Q89LK8) Dihydroxy-acid dehydratase 1 (EC 4.2.1.9) (DAD 1)| Length = 616 Score = 29.3 bits (64), Expect = 8.8 Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 2/51 (3%) Frame = -3 Query: 465 LYSLPF*E--ADIHPWKAKAHQISYYILCVVSKDMSRPNLISTSLRIHLPA 319 LYSLP E AD + A AH + ++C+ + D P ++ +LR+++PA Sbjct: 91 LYSLPSRELIADSVEYMANAH-CADGLVCISNCDKITPGMLMAALRLNIPA 140
>ILVD_XYLFT (Q87F63) Dihydroxy-acid dehydratase (EC 4.2.1.9) (DAD)| Length = 610 Score = 29.3 bits (64), Expect = 8.8 Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 2/50 (4%) Frame = -3 Query: 465 LYSLPF*E--ADIHPWKAKAHQISYYILCVVSKDMSRPNLISTSLRIHLP 322 LYSLP E AD + A AH + ++C+ + D P ++ SLR+++P Sbjct: 91 LYSLPSREIIADSVEYMANAH-CADALVCISNCDKITPGMLMASLRLNIP 139
>ILVD_XYLFA (Q9PH47) Dihydroxy-acid dehydratase (EC 4.2.1.9) (DAD)| Length = 610 Score = 29.3 bits (64), Expect = 8.8 Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 2/50 (4%) Frame = -3 Query: 465 LYSLPF*E--ADIHPWKAKAHQISYYILCVVSKDMSRPNLISTSLRIHLP 322 LYSLP E AD + A AH + ++C+ + D P ++ SLR+++P Sbjct: 91 LYSLPSREIIADSVEYMANAH-CADALVCISNCDKITPGMLMASLRLNIP 139 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,253,055 Number of Sequences: 219361 Number of extensions: 1593283 Number of successful extensions: 3950 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 3802 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3949 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5101629520 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)