>gb|AC153858.3| Mus musculus 10 BAC RP23-139H21 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 198030

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 4      cccctcctctttctctcccgccccctt 30
              ||||||||||||||||||| |||||||
Sbjct: 145640 cccctcctctttctctccctccccctt 145666

>gb|AC098475.2| Homo sapiens chromosome 3 clone RP11-611H7, complete sequence
          Length = 152945

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 435    tgtctgcctctcagaatggcaa 456
              ||||||||||||||||||||||
Sbjct: 105143 tgtctgcctctcagaatggcaa 105164

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
              complete sequence
          Length = 28386948

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 286    tgctgctattcatctccatgct 307
              ||||||||||||||||||||||
Sbjct: 629865 tgctgctattcatctccatgct 629886

>gb|AY445001.1| Euhadra senckenbergiana haplotype sen10 16S ribosomal RNA gene,
           partial sequence; mitochondrial
          Length = 819

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 533 tgatattattggtgcatatatt 554
           ||||||||||||||||||||||
Sbjct: 243 tgatattattggtgcatatatt 222

>gb|AY445000.1| Euhadra senckenbergiana haplotype sen8 16S ribosomal RNA gene,
           partial sequence; mitochondrial
          Length = 819

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 533 tgatattattggtgcatatatt 554
           ||||||||||||||||||||||
Sbjct: 243 tgatattattggtgcatatatt 222

>gb|AY444998.1| Euhadra senckenbergiana haplotype sen6 16S ribosomal RNA gene,
           partial sequence; mitochondrial
          Length = 819

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 533 tgatattattggtgcatatatt 554
           ||||||||||||||||||||||
Sbjct: 243 tgatattattggtgcatatatt 222

>dbj|AK121773.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092J11, full
            insert sequence
          Length = 2044

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 286  tgctgctattcatctccatgct 307
            ||||||||||||||||||||||
Sbjct: 1766 tgctgctattcatctccatgct 1745

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 286    tgctgctattcatctccatgct 307
              ||||||||||||||||||||||
Sbjct: 629865 tgctgctattcatctccatgct 629886

>emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa0025K19 of library OSJNBa from
              chromosome 11 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 181322

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 286    tgctgctattcatctccatgct 307
              ||||||||||||||||||||||
Sbjct: 113107 tgctgctattcatctccatgct 113086

>dbj|AP004952.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT19C08, TM0125,
             complete sequence
          Length = 89551

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 405   tttggtgggctttcgctttccatgga 430
             |||||||||||||| |||||||||||
Sbjct: 82336 tttggtgggctttcactttccatgga 82311

>emb|AL844555.8| Mouse DNA sequence from clone RP23-251E2 on chromosome 2, complete
             sequence
          Length = 122211

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 180   tccttgcttgattgatccacca 201
             ||||||||||||||||||||||
Sbjct: 20009 tccttgcttgattgatccacca 20030

>emb|BX004827.18| Human DNA sequence from clone RP13-391G2 on chromosome X Contains the
             SHOX gene for short stature homeobox and seven CpG
             islands, complete sequence
          Length = 119555

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 6     cctcctctttctctcccgccccctt 30
             ||||||||||||||||| |||||||
Sbjct: 35999 cctcctctttctctccctccccctt 35975

>emb|AL732314.18| Human DNA sequence from clone RP13-465B17 on chromosome X Contains the 5'
              end of the gene for protein phosphatase 2A 48 kDa
              regulatory subunit (PR48), a fatty acid binding protein 5
              (psoriasis-associated) (FABP5) pseudogene, a pseudogene
              similar to part of keratin 18 (KRT18) and nine CpG islands,
              complete sequence
          Length = 218723

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 6      cctcctctttctctcccgccccctt 30
              ||||||||||||||||| |||||||
Sbjct: 201524 cctcctctttctctccctccccctt 201500

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
              complete sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 286    tgctgctattcatctccatgc 306
              |||||||||||||||||||||
Sbjct: 678319 tgctgctattcatctccatgc 678339

>gb|AC108066.3| Homo sapiens BAC clone RP11-521H5 from 2, complete sequence
          Length = 158599

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 334   tctcagggaggtagagattagattc 358
             ||||||||||||||||| |||||||
Sbjct: 91488 tctcagggaggtagagagtagattc 91512

>emb|AL845356.8| Mouse DNA sequence from clone RP23-29O14 on chromosome 2, complete
              sequence
          Length = 141599

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 384    cacataagatatagtatgaga 404
              |||||||||||||||||||||
Sbjct: 136612 cacataagatatagtatgaga 136592

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 286    tgctgctattcatctccatgc 306
              |||||||||||||||||||||
Sbjct: 678319 tgctgctattcatctccatgc 678339

>emb|BX000511.2|CNS08CE1 Oryza sativa chromosome 12, . BAC OJ1136_E08 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 118211

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 286    tgctgctattcatctccatgc 306
              |||||||||||||||||||||
Sbjct: 100815 tgctgctattcatctccatgc 100795

>gb|AF004947.1|AF004947 Oryza sativa protein kinase mRNA, complete cds
          Length = 2055

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 286  tgctgctattcatctccatgc 306
            |||||||||||||||||||||
Sbjct: 1798 tgctgctattcatctccatgc 1778

>emb|AL845291.5| Mouse DNA sequence from clone RP23-1O11 on chromosome 2, complete
              sequence
          Length = 209914

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 563    tttataggctagtttgtggaattcc 587
              ||||||||||| |||||||||||||
Sbjct: 193248 tttataggctactttgtggaattcc 193272

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 163     ggggatcgtttttcagttcc 182
               ||||||||||||||||||||
Sbjct: 2244847 ggggatcgtttttcagttcc 2244866

>ref|XM_748937.1| Aspergillus fumigatus Af293 hypothetical protein (Afu5g06020) partial
            mRNA
          Length = 2877

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 145  tgctgccgctgcggatttgg 164
            ||||||||||||||||||||
Sbjct: 2663 tgctgccgctgcggatttgg 2644

>gb|AC123853.2| Mus musculus BAC clone RP23-326J1 from chromosome 19, complete sequence
          Length = 205768

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 527   agagagtgatattattggtgcata 550
             |||| |||||||||||||||||||
Sbjct: 38362 agagggtgatattattggtgcata 38385

>gb|AC113490.10| Mus musculus chromosome 1, clone RP23-358M7, complete sequence
          Length = 226924

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 4     cccctcctctttctctcccgcccc 27
             ||||||||||||||||||| ||||
Sbjct: 31861 cccctcctctttctctcccccccc 31838

>gb|AC027269.5| Homo sapiens BAC clone RP11-100C21 from 7, complete sequence
          Length = 159698

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 258   cgttgcctgcttcataggga 277
             ||||||||||||||||||||
Sbjct: 55672 cgttgcctgcttcataggga 55691

>gb|AC137930.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0030C11,
              complete sequence
          Length = 156647

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 163    ggggatcgtttttcagttcc 182
              ||||||||||||||||||||
Sbjct: 135141 ggggatcgtttttcagttcc 135160

>gb|AC137697.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0081A17, from chromosome 3, complete sequence
          Length = 134821

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 163   ggggatcgtttttcagttcc 182
             ||||||||||||||||||||
Sbjct: 81209 ggggatcgtttttcagttcc 81190

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 163     ggggatcgtttttcagttcc 182
               ||||||||||||||||||||
Sbjct: 2244859 ggggatcgtttttcagttcc 2244878

>gb|AC115959.17| Mus musculus chromosome 1, clone RP24-65D16, complete sequence
          Length = 187431

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 4      cccctcctctttctctcccgcccc 27
              ||||||||||||||||||| ||||
Sbjct: 167936 cccctcctctttctctcccccccc 167913


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,830,746
Number of Sequences: 3902068
Number of extensions: 4830746
Number of successful extensions: 96799
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 96472
Number of HSP's gapped (non-prelim): 327
length of query: 587
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 564
effective length of database: 17,143,297,704
effective search space: 9668819905056
effective search space used: 9668819905056
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)