>PHO85_KLULA (Q92241) Negative regulator of the PHO system (EC 2.7.11.22)|
           (Serine/threonine-protein kinase PHO85)
          Length = 304

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = -2

Query: 255 TTCHARWNQPTALIIYTHILGKHKPRESRNSCQRNSEHSDDD 130
           T     W Q T L  Y  +L  H PR+ +   Q N+E   DD
Sbjct: 227 TPVEQTWPQVTQLAKYNPLLPPHMPRDLKQLLQNNTEEVLDD 268

>PACC_MAGGR (Q52B93) pH-response transcription factor pacC/RIM101|
          Length = 559

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 18/70 (25%)
 Frame = -2

Query: 303 SESSKAKYNHQTNCTDTTCHA---------RWNQ-----PTALIIYTHILGKHKPRESRN 166
           S SS +  N     T TT  +         RWNQ     P+A  +Y HI  +H  R+S N
Sbjct: 25  SSSSNSNGNTPAPSTSTTATSQSSDDSLICRWNQCSERFPSAEALYDHICERHVGRKSTN 84

Query: 165 ----SCQRNS 148
               +C  NS
Sbjct: 85  NLNLTCHWNS 94

>PKD1_DICDI (P34100) Developmentally-regulated protein kinase 1 (EC 2.7.11.1)|
           (Fragment)
          Length = 416

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -2

Query: 351 RHSHFFSIKLNNNVNFSESSKAKYNHQTNCTDTTC 247
           +   FF+ + NNN NF+ ++    N    CT  TC
Sbjct: 375 QQQQFFNFQFNNN-NFNNNNNNNNNFNEACTSNTC 408

>YAVK_CAEEL (Q17851) Hypothetical protein C09B9.3 in chromosome IV|
          Length = 884

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 25/110 (22%), Positives = 48/110 (43%), Gaps = 13/110 (11%)
 Frame = +3

Query: 39  LCVHGRTRYSVALLYPKG-------LNAVTLPGQNV*RRHHCVLSFADNYFCFLLVYACL 197
           +C+ G  + + ALL P G       +N +      +   ++C ++  D+YF F  V    
Sbjct: 279 ICLMGWLKVAEALLNPLGEDDDDFEVNFLIDSNIYMTMSYNCDVA-TDSYFNFFKVNPFT 337

Query: 198 KYVYI------LLVQWAGSILHGMWYQCSWFDDCIWLYCFH*SSHCYLTL 329
           K  Y       +L +W GS+   +W + +     +W+  ++     Y+TL
Sbjct: 338 KSTYKNNIIFQILFRWKGSVWKSIWKELA-----LWIVTYYTIKAVYMTL 382

>ZBT39_HUMAN (O15060) Zinc finger and BTB domain-containing protein 39|
          Length = 712

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = -2

Query: 168 NSCQRNSEHSDDDVIHFGQVESLRL 94
           NSC  NSEHS D    FGQ++ L+L
Sbjct: 274 NSCLSNSEHSKDP--GFGQMDELQL 296

>SYQ_PSESM (Q87YQ1) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA|
           ligase) (GlnRS)
          Length = 569

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 17/70 (24%), Positives = 29/70 (41%)
 Frame = -2

Query: 315 NVNFSESSKAKYNHQTNCTDTTCHARWNQPTALIIYTHILGKHKPRESRNSCQRNSEHSD 136
           N+N++ +SK K        D      W+ P    +       + P+  RN C+    +  
Sbjct: 279 NLNYTITSKRKLKQ---LVDEKHVNGWDDPRMSTLSGFRRRGYTPKSIRNFCEMIGTNRS 335

Query: 135 DDVIHFGQVE 106
           D V+ FG +E
Sbjct: 336 DGVVDFGMLE 345


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,750,093
Number of Sequences: 219361
Number of extensions: 893210
Number of successful extensions: 2203
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2203
length of database: 80,573,946
effective HSP length: 96
effective length of database: 59,515,290
effective search space used: 1428366960
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)