ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd26g01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009571.1| Triticum aestivum clone wre1n.pk0021.e3:fis, full... 58 4e-05
2gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.59
3gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.59
4dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.59
5gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.59
6gb|AC121824.2| Mus musculus BAC clone RP23-467P15 from 18, compl... 42 2.3
7dbj|AK161182.1| Mus musculus 0 day neonate head cDNA, RIKEN full... 42 2.3
8gb|AY177404.1| Secale cereale O-methyltransferase mRNA, complete... 42 2.3
9gb|AC142106.4| Mus musculus BAC clone RP24-180L10 from 1, comple... 42 2.3
10gb|AC140367.3| Mus musculus BAC clone RP24-226L19 from 1, comple... 42 2.3
11gb|AC140461.4| Mus musculus BAC clone RP23-11M24 from 1, complet... 42 2.3
12ref|XM_635461.1| Dictyostelium discoideum hypothetical protein (... 40 9.2
13ref|XM_463174.1| Oryza sativa (japonica cultivar-group), mRNA 40 9.2
14gb|DQ158085.1| Streptococcus equi subsp. equi collagen-like prot... 40 9.2
15gb|AY326314.1| Streptococcus equi collagen-like protein 3 (Scl3A... 40 9.2
16ref|XM_955477.1| Neurospora crassa OR74A hypothetical protein (N... 40 9.2
17ref|XM_325462.1| Neurospora crassa OR74A hypothetical protein (N... 40 9.2
18ref|XM_452647.1| Kluyveromyces lactis NRRL Y-1140, KLLA0C10054g ... 40 9.2
19gb|AC156605.13| Mus musculus chromosome 7, clone RP23-305G5, com... 40 9.2
20gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, comp... 40 9.2
21gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 9.2
22gb|AC009055.10| Homo sapiens chromosome 16 clone RP11-256I9, com... 40 9.2
23ref|NG_000839.1| Homo sapiens cystatin locus (CST@) on chromosom... 40 9.2
24gb|AC136972.3| Oryza sativa chromosome 3 BAC OSJNBb0007E22 genom... 40 9.2
25gb|AC004485.2| Homo sapiens BAC clone CTB-118E13 from 7, complet... 40 9.2
26gb|AC141436.17| Medicago truncatula clone mth2-31k19, complete s... 40 9.2
27gb|AC139706.8| Medicago truncatula clone mth2-28n21, complete se... 40 9.2
28emb|AL591074.10| Human DNA sequence from clone XXyac-60D10 on ch... 40 9.2
29emb|AL354868.10| Human DNA sequence from clone RP11-339A7 on chr... 40 9.2
30emb|CR382123.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 40 9.2
31emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, ... 40 9.2
32emb|AL031180.3|SPUNK4 S.pombe chromosome I cosmid c2E11 40 9.2
33emb|AJ242589.1|PFA242589 Plasmodium falciparum sub-1 gene for su... 40 9.2
34emb|AL683843.9| Mouse DNA sequence from clone RP23-217E1 on chro... 40 9.2
35gb|BC040984.1| Homo sapiens cDNA clone IMAGE:4801412 40 9.2
36gb|AC092305.2| Homo sapiens chromosome 19 clone LLNLR-229B1, com... 40 9.2
37ref|NM_001019392.1| Schizosaccharomyces pombe 972h- hypothetical... 40 9.2
38dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
39gb|AC010606.7| Homo sapiens chromosome 19 clone CTB-25J19, compl... 40 9.2
40gb|AC015979.4|AC015979 Homo sapiens BAC clone RP11-538M13 from Y... 40 9.2
41gb|AC105109.10| Homo sapiens chromosome 15, clone CTD-2343P13, c... 40 9.2
42gb|AC104020.10| Homo sapiens chromosome 15, clone RP11-369K8, co... 40 9.2
43dbj|AB084868.1| Schizosaccharomyces pombe poly A-bearing RNA wit... 40 9.2
44gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 9.2
45gb|BC084233.1| Xenopus laevis hypothetical LOC495070, mRNA (cDNA... 40 9.2
46emb|AL954769.9| Zebrafish DNA sequence from clone CH211-262A21 i... 40 9.2
47emb|AL683810.10| Mouse DNA sequence from clone RP23-10L18 on chr... 40 9.2
48emb|AL671492.12| Mouse DNA sequence from clone RP23-286H11 on ch... 40 9.2
49emb|AL732428.7| Mouse DNA sequence from clone RP23-347P2 on chro... 40 9.2 
>gb|BT009571.1| Triticum aestivum clone wre1n.pk0021.e3:fis, full insert mRNA
           sequence
          Length = 770

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                
Query: 628 agtcactcaccgactgttgtggtggtgatggaacgac 664
           |||||||||||||||| |||||||||||||| |||||
Sbjct: 25  agtcactcaccgactgctgtggtggtgatgggacgac 61
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>gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0097K08 map C827S, complete sequence
          Length = 137870

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 79/98 (80%)
 Strand = Plus / Plus

                                                                         
Query: 84    caggcggacctatggcgccatagcttgtgccacctcagggccatagcactcaggtgtgct 143
             ||||| |||||||||||||| ||||| | | |||||| |||||| || ||| | || || 
Sbjct: 43569 caggccgacctatggcgccacagcttctcctacctcacggccatggcgctccgctgcgcc 43628

                                                   
Query: 144   gtccagctcggcatccctactgcgattcaccgactcgg 181
             | | ||||||||||||| || || || ||||| |||||
Sbjct: 43629 gccaagctcggcatccccaccgccatccaccgcctcgg 43666
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>gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0026P08 map near C827S, complete sequence
          Length = 148676

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 79/98 (80%)
 Strand = Plus / Minus

                                                                         
Query: 84    caggcggacctatggcgccatagcttgtgccacctcagggccatagcactcaggtgtgct 143
             ||||| |||||||||||||| ||||| | | |||||| |||||| || ||| | || || 
Sbjct: 52206 caggccgacctatggcgccacagcttctcctacctcacggccatggcgctccgctgcgcc 52147

                                                   
Query: 144   gtccagctcggcatccctactgcgattcaccgactcgg 181
             | | ||||||||||||| || || || ||||| |||||
Sbjct: 52146 gccaagctcggcatccccaccgccatccaccgcctcgg 52109
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 79/98 (80%)
 Strand = Plus / Minus

                                                                           
Query: 84      caggcggacctatggcgccatagcttgtgccacctcagggccatagcactcaggtgtgct 143
               ||||| |||||||||||||| ||||| | | |||||| |||||| || ||| | || || 
Sbjct: 7138986 caggccgacctatggcgccacagcttctcctacctcacggccatggcgctccgctgcgcc 7138927

                                                     
Query: 144     gtccagctcggcatccctactgcgattcaccgactcgg 181
               | | ||||||||||||| || || || ||||| |||||
Sbjct: 7138926 gccaagctcggcatccccaccgccatccaccgcctcgg 7138889
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 79/98 (80%)
 Strand = Plus / Minus

                                                                           
Query: 84      caggcggacctatggcgccatagcttgtgccacctcagggccatagcactcaggtgtgct 143
               ||||| |||||||||||||| ||||| | | |||||| |||||| || ||| | || || 
Sbjct: 7204957 caggccgacctatggcgccacagcttctcctacctcacggccatggcgctccgctgcgcc 7204898

                                                     
Query: 144     gtccagctcggcatccctactgcgattcaccgactcgg 181
               | | ||||||||||||| || || || ||||| |||||
Sbjct: 7204897 gccaagctcggcatccccaccgccatccaccgcctcgg 7204860
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>gb|AC121824.2| Mus musculus BAC clone RP23-467P15 from 18, complete sequence
          Length = 195027

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 559   tggctgcccatgaccatttggggat 583
             ||||| |||||||||||||||||||
Sbjct: 28463 tggcttcccatgaccatttggggat 28439
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>dbj|AK161182.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched
            library, clone:4832408G11 product:erythrocyte protein
            band 4.1-like 4a, full insert sequence
          Length = 3778

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 559  tggctgcccatgaccatttggggat 583
            ||||| |||||||||||||||||||
Sbjct: 1864 tggcttcccatgaccatttggggat 1888
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>gb|AY177404.1| Secale cereale O-methyltransferase mRNA, complete cds
          Length = 1373

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 432 gctgactggttcaagaaggac 452
           |||||||||||||||||||||
Sbjct: 450 gctgactggttcaagaaggac 470
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>gb|AC142106.4| Mus musculus BAC clone RP24-180L10 from 1, complete sequence
          Length = 194634

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 443    caagaaggacatcgcaccaccaccatcac 471
              ||||||||||| | |||||||||||||||
Sbjct: 154441 caagaaggacaccccaccaccaccatcac 154469
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>gb|AC140367.3| Mus musculus BAC clone RP24-226L19 from 1, complete sequence
          Length = 183563

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 443    caagaaggacatcgcaccaccaccatcac 471
              ||||||||||| | |||||||||||||||
Sbjct: 166052 caagaaggacaccccaccaccaccatcac 166024
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>gb|AC140461.4| Mus musculus BAC clone RP23-11M24 from 1, complete sequence
          Length = 202209

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 542    gatgttccatgaagctttggc 562
              |||||||||||||||||||||
Sbjct: 129715 gatgttccatgaagctttggc 129695
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>ref|XM_635461.1| Dictyostelium discoideum hypothetical protein (DDB0204579), partial
           mRNA
          Length = 1566

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 457 caccaccaccatcaccattt 476
           ||||||||||||||||||||
Sbjct: 262 caccaccaccatcaccattt 243
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>ref|XM_463174.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 924

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 455 cgcaccaccaccatcaccat 474
           ||||||||||||||||||||
Sbjct: 536 cgcaccaccaccatcaccat 555
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>gb|DQ158085.1| Streptococcus equi subsp. equi collagen-like protein I (sclI) gene,
            complete cds
          Length = 1449

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 420  gccttagggctagctgactg 439
            ||||||||||||||||||||
Sbjct: 1310 gccttagggctagctgactg 1291
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>gb|AY326314.1| Streptococcus equi collagen-like protein 3 (Scl3A) gene, partial cds
          Length = 1473

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 420  gccttagggctagctgactg 439
            ||||||||||||||||||||
Sbjct: 1337 gccttagggctagctgactg 1318
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>ref|XM_955477.1| Neurospora crassa OR74A hypothetical protein (NCU05608.1) partial
           mRNA
          Length = 7530

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 537 gacaagatgttccatgaagc 556
           ||||||||||||||||||||
Sbjct: 754 gacaagatgttccatgaagc 773
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>ref|XM_325462.1| Neurospora crassa OR74A hypothetical protein (NCU05608.1) partial
           mRNA
          Length = 7530

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 537 gacaagatgttccatgaagc 556
           ||||||||||||||||||||
Sbjct: 754 gacaagatgttccatgaagc 773
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>ref|XM_452647.1| Kluyveromyces lactis NRRL Y-1140, KLLA0C10054g predicted mRNA
          Length = 708

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 457 caccaccaccatcaccattt 476
           ||||||||||||||||||||
Sbjct: 309 caccaccaccatcaccattt 328
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>gb|AC156605.13| Mus musculus chromosome 7, clone RP23-305G5, complete sequence
          Length = 234816

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 457   caccaccaccatcaccattt 476
             ||||||||||||||||||||
Sbjct: 50207 caccaccaccatcaccattt 50226
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>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 95      atggcgccatagcttgtgcc 114
               ||||||||||||||||||||
Sbjct: 4526138 atggcgccatagcttgtgcc 4526119
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 455      cgcaccaccaccatcaccat 474
                ||||||||||||||||||||
Sbjct: 22936371 cgcaccaccaccatcaccat 22936390
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>gb|AC009055.10| Homo sapiens chromosome 16 clone RP11-256I9, complete sequence
          Length = 170831

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 457    caccaccaccatcaccattt 476
              ||||||||||||||||||||
Sbjct: 140495 caccaccaccatcaccattt 140476
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>ref|NG_000839.1| Homo sapiens cystatin locus (CST@) on chromosome 20
          Length = 477159

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 457    caccaccaccatcaccattt 476
              ||||||||||||||||||||
Sbjct: 132331 caccaccaccatcaccattt 132312
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>gb|AC136972.3| Oryza sativa chromosome 3 BAC OSJNBb0007E22 genomic sequence, complete
              sequence
          Length = 184783

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 455    cgcaccaccaccatcaccat 474
              ||||||||||||||||||||
Sbjct: 138901 cgcaccaccaccatcaccat 138920
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>gb|AC004485.2| Homo sapiens BAC clone CTB-118E13 from 7, complete sequence
          Length = 185516

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 291   tcccctaaggaggggaccta 310
             ||||||||||||||||||||
Sbjct: 78849 tcccctaaggaggggaccta 78868
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>gb|AC141436.17| Medicago truncatula clone mth2-31k19, complete sequence
          Length = 112268

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 642   tgttgtggtggtgatggaac 661
             ||||||||||||||||||||
Sbjct: 18483 tgttgtggtggtgatggaac 18464
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>gb|AC139706.8| Medicago truncatula clone mth2-28n21, complete sequence
          Length = 106244

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 642   tgttgtggtggtgatggaac 661
             ||||||||||||||||||||
Sbjct: 87761 tgttgtggtggtgatggaac 87780
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>emb|AL591074.10| Human DNA sequence from clone XXyac-60D10 on chromosome 20 Contains the
             CST5 gene for cystatin D, the CST2 gene for cystatin SA,
             the CST1 gene for cystatin SN and the CSTP2 gene for
             cystatin pseudogene 2, complete sequence
          Length = 203076

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 457   caccaccaccatcaccattt 476
             ||||||||||||||||||||
Sbjct: 74381 caccaccaccatcaccattt 74400
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>emb|AL354868.10| Human DNA sequence from clone RP11-339A7 on chromosome 6 Contains a
             ribosomal protein L21 (RPL21) pseudogene, complete
             sequence
          Length = 164018

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 543   atgttccatgaagctttggctgcc 566
             ||||||||| ||||||||||||||
Sbjct: 61955 atgttccattaagctttggctgcc 61932
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>emb|CR382123.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome C of strain NRRL
              Y-1140 of Kluyveromyces lactis
          Length = 1753957

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 457    caccaccaccatcaccattt 476
              ||||||||||||||||||||
Sbjct: 867785 caccaccaccatcaccattt 867766
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>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome
          Length = 5064019

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 167     gattcaccgactcggtggca 186
               ||||||||||||||||||||
Sbjct: 2424476 gattcaccgactcggtggca 2424457
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>emb|AL031180.3|SPUNK4 S.pombe chromosome I cosmid c2E11
          Length = 31812

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 269   ggccgcgtcaggcgccttag 288
             ||||||||||||||||||||
Sbjct: 15645 ggccgcgtcaggcgccttag 15626
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>emb|AJ242589.1|PFA242589 Plasmodium falciparum sub-1 gene for subtilisin-like protease PfSUB-1
            and his tag
          Length = 2088

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 456  gcaccaccaccatcaccatt 475
            ||||||||||||||||||||
Sbjct: 2067 gcaccaccaccatcaccatt 2086
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>emb|AL683843.9| Mouse DNA sequence from clone RP23-217E1 on chromosome 11 Contains part
             of the Ranbp17 gene for RAN binding protein 17, an acidic
             (leucine-rich) nuclear phosphoprotein 32 family, member E
             (Anp32e) pseudogene and a high mobility group box 1
             (Hmgb1) pseudogene, complete sequence
          Length = 198926

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 459   ccaccaccatcaccatttga 478
             ||||||||||||||||||||
Sbjct: 23126 ccaccaccatcaccatttga 23145
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>gb|BC040984.1| Homo sapiens cDNA clone IMAGE:4801412
          Length = 1785

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 457 caccaccaccatcaccattt 476
           ||||||||||||||||||||
Sbjct: 993 caccaccaccatcaccattt 974
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>gb|AC092305.2| Homo sapiens chromosome 19 clone LLNLR-229B1, complete sequence
          Length = 35935

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 457   caccaccaccatcaccattt 476
             ||||||||||||||||||||
Sbjct: 21109 caccaccaccatcaccattt 21128
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>ref|NM_001019392.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPACUNK4.13c),
            partial mRNA
          Length = 1224

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 269  ggccgcgtcaggcgccttag 288
            ||||||||||||||||||||
Sbjct: 1047 ggccgcgtcaggcgccttag 1028
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 455      cgcaccaccaccatcaccat 474
                ||||||||||||||||||||
Sbjct: 22929399 cgcaccaccaccatcaccat 22929418
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>gb|AC010606.7| Homo sapiens chromosome 19 clone CTB-25J19, complete sequence
          Length = 105940

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 457   caccaccaccatcaccattt 476
             ||||||||||||||||||||
Sbjct: 30855 caccaccaccatcaccattt 30836
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>gb|AC015979.4|AC015979 Homo sapiens BAC clone RP11-538M13 from Y, complete sequence
          Length = 22212

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 457  caccaccaccatcaccattt 476
            ||||||||||||||||||||
Sbjct: 2544 caccaccaccatcaccattt 2525
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>gb|AC105109.10| Homo sapiens chromosome 15, clone CTD-2343P13, complete sequence
          Length = 76158

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 457 caccaccaccatcaccattt 476
           ||||||||||||||||||||
Sbjct: 63  caccaccaccatcaccattt 82
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>gb|AC104020.10| Homo sapiens chromosome 15, clone RP11-369K8, complete sequence
          Length = 171307

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 457    caccaccaccatcaccattt 476
              ||||||||||||||||||||
Sbjct: 126873 caccaccaccatcaccattt 126892
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>dbj|AB084868.1| Schizosaccharomyces pombe poly A-bearing RNA without long open
           reading frames, clone:prl56
          Length = 1055

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 269 ggccgcgtcaggcgccttag 288
           ||||||||||||||||||||
Sbjct: 182 ggccgcgtcaggcgccttag 201
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 69      caactgattcaggcgcaggc 88
               ||||||||||||||||||||
Sbjct: 4951914 caactgattcaggcgcaggc 4951895
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>gb|BC084233.1| Xenopus laevis hypothetical LOC495070, mRNA (cDNA clone MGC:81542
            IMAGE:6862770), complete cds
          Length = 2347

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 283  ccttagcgtcccctaaggag 302
            ||||||||||||||||||||
Sbjct: 1085 ccttagcgtcccctaaggag 1066
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>emb|AL954769.9| Zebrafish DNA sequence from clone CH211-262A21 in linkage group 7,
            complete sequence
          Length = 145555

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 457  caccaccaccatcaccattt 476
            ||||||||||||||||||||
Sbjct: 5438 caccaccaccatcaccattt 5419
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>emb|AL683810.10| Mouse DNA sequence from clone RP23-10L18 on chromosome 2, complete
             sequence
          Length = 186882

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 456   gcaccaccaccatcaccatt 475
             ||||||||||||||||||||
Sbjct: 35820 gcaccaccaccatcaccatt 35839
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>emb|AL671492.12| Mouse DNA sequence from clone RP23-286H11 on chromosome X, complete
              sequence
          Length = 202638

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 455    cgcaccaccaccatcaccat 474
              ||||||||||||||||||||
Sbjct: 126604 cgcaccaccaccatcaccat 126585
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>emb|AL732428.7| Mouse DNA sequence from clone RP23-347P2 on chromosome 2, complete
             sequence
          Length = 123627

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 456   gcaccaccaccatcaccatt 475
             ||||||||||||||||||||
Sbjct: 71474 gcaccaccaccatcaccatt 71455


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,509,895
Number of Sequences: 3902068
Number of extensions: 4509895
Number of successful extensions: 113745
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 113340
Number of HSP's gapped (non-prelim): 401
length of query: 672
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 649
effective length of database: 17,143,297,704
effective search space: 11126000209896
effective search space used: 11126000209896
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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