>ref|XM_385373.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05197.1)
            partial mRNA
          Length = 1932

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 190  atgcgctcccgccagctctcca 211
            ||||||||||||||||||||||
Sbjct: 1613 atgcgctcccgccagctctcca 1592

>gb|AE012054.1| Xanthomonas axonopodis pv. citri str. 306,  section 432 of 469 of the
             complete genome
          Length = 14572

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 128   tgctccagcgaacgcaggcggc 149
             ||||||||||||||||||||||
Sbjct: 12811 tgctccagcgaacgcaggcggc 12832

>gb|AC105345.3| Homo sapiens BAC clone RP11-689P11 from 4, complete sequence
          Length = 196902

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 466    atgttggggtttccaaggaag 486
              |||||||||||||||||||||
Sbjct: 100281 atgttggggtttccaaggaag 100301

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 139      acgcaggcggcggtcgcggaggagg 163
                |||||||||||||| ||||||||||
Sbjct: 39599309 acgcaggcggcggtggcggaggagg 39599333



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 302      atgagaagcatctttctgca 321
                ||||||||||||||||||||
Sbjct: 40816992 atgagaagcatctttctgca 40816973



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 144      ggcggcggtcgcggaggagg 163
                ||||||||||||||||||||
Sbjct: 27465176 ggcggcggtcgcggaggagg 27465195

>dbj|AP003416.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0456E05
          Length = 173699

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 139   acgcaggcggcggtcgcggaggagg 163
             |||||||||||||| ||||||||||
Sbjct: 80265 acgcaggcggcggtggcggaggagg 80289

>gb|AC116643.11| Homo sapiens BAC clone RP11-637J21 from 4, complete sequence
          Length = 214284

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 466   atgttggggtttccaaggaag 486
             |||||||||||||||||||||
Sbjct: 37323 atgttggggtttccaaggaag 37343

>ref|NM_001002980.1| Canis familiaris collagen, type VII, alpha 1 (epidermolysis bullosa,
            dystrophic, dominant and recessive) (COL7A1), mRNA
          Length = 8811

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 195  ctcccgccagctctccagcaaggcctcc 222
            ||||| |||| |||||||||||||||||
Sbjct: 6952 ctcccaccaggtctccagcaaggcctcc 6925

>gb|AC134053.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
            OSJNBb0005H02, complete sequence
          Length = 144882

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 143  aggcggcggtcgcggaggag 162
            ||||||||||||||||||||
Sbjct: 6982 aggcggcggtcgcggaggag 6963

>gb|AC108224.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0038F07,
              complete sequence
          Length = 175703

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 143    aggcggcggtcgcggaggag 162
              ||||||||||||||||||||
Sbjct: 150881 aggcggcggtcgcggaggag 150862

>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 101     gcttggcgaggaggctcggt 120
               ||||||||||||||||||||
Sbjct: 2787127 gcttggcgaggaggctcggt 2787108

>gb|BC045852.1| Danio rerio nuclear factor (erythroid-derived 2)-like 2, mRNA (cDNA
           clone MGC:56001 IMAGE:3819738), complete cds
          Length = 2108

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 261 gcagaaggaggtggagctgc 280
           ||||||||||||||||||||
Sbjct: 274 gcagaaggaggtggagctgc 293

>ref|NM_182889.1| Danio rerio nuclear factor (erythroid-derived 2)-like 2 (nfe2l2),
           mRNA
          Length = 2194

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 261 gcagaaggaggtggagctgc 280
           ||||||||||||||||||||
Sbjct: 164 gcagaaggaggtggagctgc 183

>gb|AY386264.1| Orf virus strain OV-SA00, complete genome
          Length = 139962

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 31/34 (91%), Gaps = 3/34 (8%)
 Strand = Plus / Plus

                                                
Query: 144    ggcggcggtcgcgga---ggagggacgcctgctc 174
              |||||||||||||||   ||||||||||||||||
Sbjct: 136534 ggcggcggtcgcggacgcggagggacgcctgctc 136567



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 31/34 (91%), Gaps = 3/34 (8%)
 Strand = Plus / Minus

                                              
Query: 144  ggcggcggtcgcgga---ggagggacgcctgctc 174
            |||||||||||||||   ||||||||||||||||
Sbjct: 3429 ggcggcggtcgcggacgcggagggacgcctgctc 3396

>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 116     tcggtggcgccctgctccag 135
               ||||||||||||||||||||
Sbjct: 1568160 tcggtggcgccctgctccag 1568141

>ref|XM_504825.1| Yarrowia lipolytica CLIB122, YALI0F00572g predicted mRNA
          Length = 3378

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 140  cgcaggcggcggtcgcggaggagg 163
            ||||||||| ||||||||||||||
Sbjct: 1992 cgcaggcggaggtcgcggaggagg 1969

>gb|AC108781.9| Mus musculus, clone RP23-304K14, complete sequence
          Length = 183718

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 521  gaagttagtgaagacaagat 540
            ||||||||||||||||||||
Sbjct: 1468 gaagttagtgaagacaagat 1487

>gb|AY183408.1| Canis familiaris type VII collagen mRNA, complete cds
          Length = 8811

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 195  ctcccgccagctctccagcaaggcctcc 222
            ||||| |||| |||||||||||||||||
Sbjct: 6952 ctcccaccaggtctccagcaaggcctcc 6925

>gb|AC144652.1| Homo sapiens fosmid clone XXFOS-81789E12 from 7, complete sequence
          Length = 25788

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   agctctccagcaaggcctcc 222
             ||||||||||||||||||||
Sbjct: 12097 agctctccagcaaggcctcc 12116

>gb|AC109175.9| Mus musculus chromosome 14, clone RP23-185I5, complete sequence
          Length = 66500

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 521   gaagttagtgaagacaagat 540
             ||||||||||||||||||||
Sbjct: 13397 gaagttagtgaagacaagat 13378

>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 142     caggcggcggtcgcggaggagggacgcctgct 173
               ||||||||||||||||||| ||  ||||||||
Sbjct: 1602148 caggcggcggtcgcggaggcggagcgcctgct 1602117

>gb|AE011765.1| Xanthomonas axonopodis pv. citri str. 306,  section 143 of 469 of the
            complete genome
          Length = 10446

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 116  tcggtggcgccctgctccag 135
            ||||||||||||||||||||
Sbjct: 1482 tcggtggcgccctgctccag 1463

>gb|AE012227.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 135
            of 460 of the complete genome
          Length = 10155

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 116  tcggtggcgccctgctccag 135
            ||||||||||||||||||||
Sbjct: 9915 tcggtggcgccctgctccag 9896

>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 116     tcggtggcgccctgctccag 135
               ||||||||||||||||||||
Sbjct: 3541767 tcggtggcgccctgctccag 3541786

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 143      aggcggcggtcgcggaggag 162
                ||||||||||||||||||||
Sbjct: 19432330 aggcggcggtcgcggaggag 19432311

>dbj|AP004330.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0052O12
          Length = 167881

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 302    atgagaagcatctttctgca 321
              ||||||||||||||||||||
Sbjct: 119638 atgagaagcatctttctgca 119619

>dbj|AP003272.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0506E04
          Length = 139934

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 302   atgagaagcatctttctgca 321
             ||||||||||||||||||||
Sbjct: 29098 atgagaagcatctttctgca 29079

>dbj|AP004145.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0047F09
          Length = 79652

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 144   ggcggcggtcgcggaggagg 163
             ||||||||||||||||||||
Sbjct: 55065 ggcggcggtcgcggaggagg 55084

>dbj|AK068611.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157H23, full
           insert sequence
          Length = 2166

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 143 aggcggcggtcgcggaggag 162
           ||||||||||||||||||||
Sbjct: 284 aggcggcggtcgcggaggag 265

>gb|U96082.1|RAU96082 Rhipicephalus appendiculatus male-specific histamine-binding
           salivary protein mRNA, complete cds
          Length = 753

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 524 gttagtgaagacaagattga 543
           ||||||||||||||||||||
Sbjct: 481 gttagtgaagacaagattga 500

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 143      aggcggcggtcgcggaggag 162
                ||||||||||||||||||||
Sbjct: 19591879 aggcggcggtcgcggaggag 19591860

>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia
             lipolytica
          Length = 4003362

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 140   cgcaggcggcggtcgcggaggagg 163
             ||||||||| ||||||||||||||
Sbjct: 93467 cgcaggcggaggtcgcggaggagg 93444

>dbj|AB081314.1| Danio rerio mRNA for transcription factor nrf2, complete cds
          Length = 2194

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 261 gcagaaggaggtggagctgc 280
           ||||||||||||||||||||
Sbjct: 164 gcagaaggaggtggagctgc 183


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,123,008
Number of Sequences: 3902068
Number of extensions: 4123008
Number of successful extensions: 82015
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 81496
Number of HSP's gapped (non-prelim): 518
length of query: 565
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 542
effective length of database: 17,143,297,704
effective search space: 9291667355568
effective search space used: 9291667355568
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)