>SAYP_DROME (Q9VWF2) Supporter of activation of yellow protein (Protein enhancer|
            of yellow 3)
          Length = 2006

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
 Frame = +2

Query: 233  SSTT*ESHTACTSASTAGMNIASGASQTAGWEGEVQ*TWTQNWH*TILGNGRR--HRALR 406
            SS+  ES      +ST+  + ++GAS  AG E E     + +   +  G   R  HR  R
Sbjct: 1648 SSSDTESGDESDFSSTSSCSSSTGASSGAGSEDEDGNECSSSVRLSTCGVCLRSQHRNAR 1707

Query: 407  QPDVSATNCFSCLVRCHPVVADLYP 481
                +   C++C  R HP   D+ P
Sbjct: 1708 DMPEAFIRCYTCRKRVHPSCVDMPP 1732

>SYI_GLUOX (Q5FRI6) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA|
            ligase) (IleRS)
          Length = 960

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = -2

Query: 304  PGGDVHAGSRCARARRVTLLSC*RWRLLPRVGKNSSLPQHC 182
            PG   H G +  RA       C  W++LP VG+N+  P  C
Sbjct: 913  PGDTAHGGPQVERAPGHKCARC--WKVLPEVGENTEHPALC 951

>RECA_CHLMU (Q9PLS6) Protein recA (Recombinase A)|
          Length = 354

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 8/70 (11%)
 Frame = -2

Query: 466 DHRMAPHQT---GKTVRR*NIRLPEC-----SMAPAVAKDGSVPVLGPGSLYLSFPPGSL 311
           +H + P+     G  +    I  P+C     S+A  +A+ G+V V+   S+    P   L
Sbjct: 97  EHALDPNYAALIGANINDLMISQPDCGEDALSIAELLARSGAVDVIVIDSVAALVPKSEL 156

Query: 310 RGPGGDVHAG 281
            G  GDVH G
Sbjct: 157 EGEIGDVHVG 166

>RECA_CHLTR (P48287) Protein recA (Recombinase A)|
          Length = 352

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 8/70 (11%)
 Frame = -2

Query: 466 DHRMAPHQT---GKTVRR*NIRLPEC-----SMAPAVAKDGSVPVLGPGSLYLSFPPGSL 311
           +H + P+     G  +    I  P+C     S+A  +A+ G+V V+   S+    P   L
Sbjct: 97  EHALDPNYAALIGANINDLMISQPDCGEDALSIAELLARSGAVDVIVIDSVAALVPKSEL 156

Query: 310 RGPGGDVHAG 281
            G  GDVH G
Sbjct: 157 EGEIGDVHVG 166

>ZDHC1_MOUSE (Q8R0N9) Probable palmitoyltransferase ZDHHC1 (EC 2.3.1.-) (Zinc|
           finger DHHC domain-containing protein 1) (DHHC-1)
          Length = 484

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
 Frame = -1

Query: 506 HRTPRTRIMDTGRRPP---DGTAPNRKNSSSLKHQAAGVLDGAGRCQGWFSASFGSRFIV 336
           +R PR+ ++D     P   +   P+R++SSS    +A  +   G    ++SAS  S   +
Sbjct: 373 YRLPRSGVLDRELPLPRLRETGTPSRRSSSSSDSTSASPVHAGGSAGAYYSASAESMEEI 432

Query: 335 PLLPTR 318
           P+  TR
Sbjct: 433 PVAQTR 438

>Y2298_ANASP (O52750) Hypothetical UPF0052 protein alr2298|
          Length = 456

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 29/91 (31%), Positives = 36/91 (39%), Gaps = 12/91 (13%)
 Frame = -2

Query: 502 VLPAP----ELWIQVGDHRMA------PHQTGKTVRR*NIRL--PECSMAPAVAKDGSVP 359
           VLPA      LW ++ D R        P   GK V+   I    P    A    K+    
Sbjct: 255 VLPATLSDVRLWAELADGRRIEGESSIPKAGGKIVKIGCIPANPPALPAAIKAIKEADYI 314

Query: 358 VLGPGSLYLSFPPGSLRGPGGDVHAGSRCAR 266
           ++GPGSLY S  P  L     D  A S+  R
Sbjct: 315 IIGPGSLYTSLIPNLLVSDIADAIAQSQAPR 345

>RAG1_ONCMY (Q91187) V(D)J recombination-activating protein 1 (RAG-1)|
          Length = 1073

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +3

Query: 198 EEFLPTRGNKRHRQQLKRVTRRARAHRL 281
           + FLP     R RQ L  +TRRA+ HRL
Sbjct: 413 DNFLPVNKGGRPRQHLLSLTRRAQKHRL 440

>RECA_CHLPN (Q9Z7E4) Protein recA (Recombinase A)|
          Length = 353

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
 Frame = -2

Query: 415 IRLPEC-----SMAPAVAKDGSVPVLGPGSLYLSFPPGSLRGPGGDVHAG 281
           I  P+C     S+A  +A+ G+V V+   S+    P   L G  GDVH G
Sbjct: 117 ISQPDCGEDALSIAELLARSGAVDVIVIDSVAALVPKSELEGDIGDVHVG 166

>RECA_CHLAB (Q5L4P3) Protein recA (Recombinase A)|
          Length = 349

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
 Frame = -2

Query: 415 IRLPEC-----SMAPAVAKDGSVPVLGPGSLYLSFPPGSLRGPGGDVHAG 281
           I  P+C     S+A  +A+ G+V V+   S+    P   L G  GDVH G
Sbjct: 117 ISQPDCGEDALSIAELLARSGAVDVIVIDSVAALVPKSELEGDIGDVHVG 166

>RECA_CHLCV (Q821E6) Protein recA (Recombinase A)|
          Length = 350

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
 Frame = -2

Query: 415 IRLPEC-----SMAPAVAKDGSVPVLGPGSLYLSFPPGSLRGPGGDVHAG 281
           I  P+C     S+A  +A+ G+V V+   S+    P   L G  GDVH G
Sbjct: 117 ISQPDCGEDALSIAELLARSGAVDVIVIDSVAALVPKSELEGDIGDVHVG 166

>CELR3_HUMAN (Q9NYQ7) Cadherin EGF LAG seven-pass G-type receptor 3 precursor|
            (Flamingo homolog 1) (hFmi1) (Multiple epidermal growth
            factor-like domains 2) (Epidermal growth factor-like 1)
          Length = 3312

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = +1

Query: 244  LRESHGVHERIDCRHEHRLRGLSNCRVGRRGTMNL 348
            L E HGV    DC   HR    + CR  R GT  +
Sbjct: 2488 LAEQHGVWTARDCELVHRNGSHARCRCSRTGTFGV 2522

>COIA1_HUMAN (P39060) Collagen alpha-1(XVIII) chain precursor [Contains:|
           Endostatin]
          Length = 1516

 Score = 24.3 bits (51), Expect(2) = 8.4
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
 Frame = -2

Query: 403 ECSMAPAVAKDGSVPVLG----PGSLYLSFPPGSLRGPGGDVHAG 281
           E S +  V +  +V  LG    PGS  +S   GS+R PGG V  G
Sbjct: 472 EDSRSEEVEEQTTVASLGAQTLPGSDSVSTWDGSVRTPGGRVKEG 516



 Score = 23.1 bits (48), Expect(2) = 8.4
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = -3

Query: 171 RAGPPTRTRQQSPPHLQCHGMPL 103
           RAGPP       PP L C   PL
Sbjct: 533 RAGPPGSPCLPGPPGLPCPVSPL 555

>Y154_SYNY3 (Q55575) Hypothetical UPF0052 protein sll0154|
          Length = 462

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 12/76 (15%)
 Frame = -2

Query: 502 VLPAP----ELWIQVGDHRMAPHQTGKTVRR*NIR----LPECSMA-PAVAKD---GSVP 359
           VLPA     +LW ++ D R    ++     +  IR    LPE   A PAV K        
Sbjct: 265 VLPATLDDVKLWAEMEDGRYVEGESNIPEAQGRIRRIGCLPESPKALPAVLKAIKAADYI 324

Query: 358 VLGPGSLYLSFPPGSL 311
           ++GPGSLY S  P  L
Sbjct: 325 IIGPGSLYTSILPNLL 340

>OPPD_LACLC (P50980) Oligopeptide transport ATP-binding protein oppD|
          Length = 338

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +1

Query: 370 HPWQRPAPSSTPAA*CFSDELFFLFGAVPS 459
           HP+ R    S P+A   SD+L+ + G+VPS
Sbjct: 250 HPYTRSLLRSNPSAETVSDDLYVIPGSVPS 279

>OPPD_LACLA (Q07733) Oligopeptide transport ATP-binding protein oppD|
          Length = 338

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +1

Query: 370 HPWQRPAPSSTPAA*CFSDELFFLFGAVPS 459
           HP+ R    S P+A   SD+L+ + G+VPS
Sbjct: 250 HPYTRSLLRSNPSAETVSDDLYVIPGSVPS 279


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,037,832
Number of Sequences: 219361
Number of extensions: 1963005
Number of successful extensions: 5943
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 5679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5941
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4258037034
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)