>gb|AY013246.1| Hordeum vulgare chromosome 5 BAC 635P2, complete sequence
          Length = 102433

 Score =  119 bits (60), Expect = 9e-24
 Identities = 133/156 (85%), Gaps = 1/156 (0%)
 Strand = Plus / Plus

                                                                          
Query: 308    aaatatctgattacaagattacgaggattgatgacgtgattgagtccaactcttaccata 367
              ||||||||||||||  ||||||||| || | |||||||||||||||||||||||||||||
Sbjct: 101471 aaatatctgattacgggattacgagaatcggtgacgtgattgagtccaactcttaccata 101530

                                                                          
Query: 368    tttgatgtatttgagcaagccacgactttgaagactca-taggaccgtgaggagtccctc 426
              ||||||| ||| |  ||||||| || ||||    |||| |||| | | |||| |||||| 
Sbjct: 101531 tttgatggattcggccaagccatgattttgggacctcattaggcctgagaggggtcccta 101590

                                                  
Query: 427    ggaaggttctagaggttcccaagagccattggatca 462
              |||||||||||||||| |||||||||| ||||||||
Sbjct: 101591 ggaaggttctagaggtgcccaagagcccttggatca 101626



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 52/59 (88%), Gaps = 1/59 (1%)
 Strand = Plus / Plus

                                                                         
Query: 10     ctaacctactaatagttgcaaaactgcacaa-gttcttgtttcatactttgatgtgtag 67
              |||||||| |||||||||||||| ||||||| ||| |||||| | ||||| ||||||||
Sbjct: 101185 ctaacctattaatagttgcaaaagtgcacaatgtttttgttttacacttttatgtgtag 101243

>emb|X64100.1|SCR1731 S.cereale DNA for dispersed repeat sequence (R173-1)
          Length = 6676

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 114/134 (85%), Gaps = 4/134 (2%)
 Strand = Plus / Plus

                                                                        
Query: 10   ctaacctactaatagttgcaaaactgcacaag-ttcttgtttcatactttgatgtgtagc 68
            ||||||||||||| |||| |||| |||||||  ||||||||| | |||||  ||||||| 
Sbjct: 4514 ctaacctactaatggttgaaaaagtgcacaatattcttgttttacactttattgtgtagg 4573

                                                                        
Query: 69   aatta-ttggaaattggcgaaaaaacgcaaaaggagacttgttggagaaggacactaact 127
            ||||| |||||||||| |  |||||||||||||||| | | |||||| ||||| || |||
Sbjct: 4574 aattacttggaaattgac--aaaaacgcaaaaggagtcgtattggagtaggactctgact 4631

                          
Query: 128  ttcctgaaatctgt 141
            ||||||||||||||
Sbjct: 4632 ttcctgaaatctgt 4645

>gb|AC139568.5| Mus musculus chromosome 12, clone RP23-208G5, complete sequence
          Length = 202882

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                      
Query: 303   gaggaaaatatctgattacaagatt 327
             |||||||||||||||||||||||||
Sbjct: 72829 gaggaaaatatctgattacaagatt 72805

>gb|AC152061.6| Mus musculus BAC clone RP23-351K4 from chromosome 12, complete sequence
          Length = 206383

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                      
Query: 303   gaggaaaatatctgattacaagatt 327
             |||||||||||||||||||||||||
Sbjct: 56396 gaggaaaatatctgattacaagatt 56420

>ref|XM_536694.2| PREDICTED: Canis familiaris similar to Complement component C8 beta
           chain precursor (Complement component 8 beta subunit)
           (LOC479555), mRNA
          Length = 1773

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 134 aaatctgttcaccaacagtttt 155
           ||||||||||||||||||||||
Sbjct: 537 aaatctgttcaccaacagtttt 558

>gb|AC099707.14| Mus musculus chromosome 1, clone RP23-329C7, complete sequence
          Length = 204557

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 392   actttgaagactcataggacc 412
             |||||||||||||||||||||
Sbjct: 75168 actttgaagactcataggacc 75188

>gb|AC087255.1|AC087255 Caenorhabditis briggsae cosmid CB021H06, complete sequence
          Length = 110191

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 331   aggattgatgacgtgattgag 351
             |||||||||||||||||||||
Sbjct: 84094 aggattgatgacgtgattgag 84074

>emb|AL512884.15| Human DNA sequence from clone RP13-775K13 on chromosome Xp11.1-11.22,
              complete sequence
          Length = 157064

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 298    actaggaggaaaatatctga 317
              ||||||||||||||||||||
Sbjct: 148776 actaggaggaaaatatctga 148795

>ref|XM_968361.1| PREDICTED: Tribolium castaneum similar to CG11680-PA, isoform A
            (LOC662250), mRNA
          Length = 3663

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 367  atttgatgtatttgagcaag 386
            ||||||||||||||||||||
Sbjct: 1912 atttgatgtatttgagcaag 1893

>gb|AC124306.4| Homo sapiens chromosome 15, clone RP11-275I4, complete sequence
          Length = 160846

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 108    gttggagaaggacactaact 127
              ||||||||||||||||||||
Sbjct: 126410 gttggagaaggacactaact 126429

>gb|AC108748.7| Homo sapiens 3 BAC RP11-280H21 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 60995

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 37   acaagttcttgtttcatact 56
            ||||||||||||||||||||
Sbjct: 6770 acaagttcttgtttcatact 6751

>gb|DQ380228.1| Heliconius erato/melpomene mixed genomic library microsatellite
           He_CA_005 sequence
          Length = 710

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 70  attattggaaattggcgaaa 89
           ||||||||||||||||||||
Sbjct: 193 attattggaaattggcgaaa 212

>gb|AC083811.22| Homo sapiens 12 BAC RP11-810G6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 173067

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 225   aagtttatggaattgattct 244
             ||||||||||||||||||||
Sbjct: 68856 aagtttatggaattgattct 68837

>dbj|AK026442.1| Homo sapiens cDNA: FLJ22789 fis, clone KAIA2171
          Length = 798

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 225 aagtttatggaattgattct 244
           ||||||||||||||||||||
Sbjct: 622 aagtttatggaattgattct 641

>gb|BC029120.1| Homo sapiens chromosome 12 open reading frame 26, mRNA (cDNA clone
           MGC:34762 IMAGE:5189049), complete cds
          Length = 2085

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 225 aagtttatggaattgattct 244
           ||||||||||||||||||||
Sbjct: 617 aagtttatggaattgattct 636

>ref|NM_032230.1| Homo sapiens chromosome 12 open reading frame 26 (C12orf26), mRNA
          Length = 2085

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 225 aagtttatggaattgattct 244
           ||||||||||||||||||||
Sbjct: 617 aagtttatggaattgattct 636


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,284,937
Number of Sequences: 3902068
Number of extensions: 4284937
Number of successful extensions: 79329
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79305
Number of HSP's gapped (non-prelim): 23
length of query: 481
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 459
effective length of database: 17,147,199,772
effective search space: 7870564695348
effective search space used: 7870564695348
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)