Clone Information

BLAST Search Result

Clone Name	basd25p17
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	PPE01_MYCTU (Q10892) Hypothetical PPE-family protein PPE1	32	0.77
2	CHEB3_PSEAE (Q9HXT8) Chemotaxis response regulator protein-gluta...	32	0.77
3	AL1A1_RAT (P51647) Retinal dehydrogenase 1 (EC 1.2.1.36) (RalDH1...	32	1.3
4	AL1A1_MOUSE (P24549) Retinal dehydrogenase 1 (EC 1.2.1.36) (RalD...	32	1.3
5	EFTS_ZYMMO (Q9X5E8) Elongation factor Ts (EF-Ts)	31	1.7
6	VNS1_AHSV6 (P87505) Nonstructural protein NS1	30	2.9
7	VNS1_AHSV4 (Q03068) Nonstructural protein NS1 (Hydrophobic tubul...	30	2.9
8	AL1A1_MACFA (Q8HYE4) Retinal dehydrogenase 1 (EC 1.2.1.36) (RalD...	30	2.9
9	AL1A1_HUMAN (P00352) Retinal dehydrogenase 1 (EC 1.2.1.36) (RalD...	30	2.9
10	CHB1_LYMDI (P43515) Chorion class B protein Ld10 precursor	30	2.9
11	CXI_CONCE (P69494) I-superfamily conotoxin precursor	30	3.8
12	AL1A1_RABIT (Q8MI17) Retinal dehydrogenase 1 (EC 1.2.1.36) (RalD...	30	3.8
13	AL1A4_RAT (P13601) Aldehyde dehydrogenase, cytosolic 1 (EC 1.2.1...	30	3.8
14	YAGX_ECOLI (P77802) Hypothetical protein yagX precursor	30	5.0
15	VNS1_AHSV9 (Q85967) Nonstructural protein NS1	30	5.0
16	MARE1_HUMAN (Q15691) Microtubule-associated protein RP/EB family...	30	5.0
17	PIC_SHIFL (Q54151) Serine protease pic precursor (EC 3.4.21.-) (...	29	6.5
18	PIC_ECOLI (Q7BS42) Serine protease pic precursor (EC 3.4.21.-)	29	6.5
19	KRA55_HUMAN (Q701N2) Keratin-associated protein 5-5 (Keratin-ass...	29	6.5
20	ZF64B_HUMAN (Q9NTW7) Zinc finger protein 64, isoforms 3 and 4 (Z...	29	8.5
21	ZFP64_MOUSE (Q99KE8) Zinc finger protein 64 (Zfp-64)	29	8.5
22	AL1A1_SHEEP (P51977) Retinal dehydrogenase 1 (EC 1.2.1.36) (RalD...	29	8.5
23	AL1A1_HORSE (P15437) Retinal dehydrogenase 1 (EC 1.2.1.36) (RalD...	29	8.5
24	AL1A1_BOVIN (P48644) Retinal dehydrogenase 1 (EC 1.2.1.36) (RalD...	29	8.5
25	FBX46_HUMAN (Q6PJ61) F-box only protein 46 (F-box only protein 3...	29	8.5

>PPE01_MYCTU (Q10892) Hypothetical PPE-family protein PPE1|
          Length = 463

 Score = 32.3 bits (72), Expect = 0.77
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = -2

Query: 281 PGVAPPTSHPVLTVVAASDVHEAVVLPGHLDVVPGVGVNGV 159
           PG +PPTS+P     +++ V  A   PG    VPG+   GV
Sbjct: 304 PGGSPPTSNPAPAAPSSNSVGSASAAPGISYAVPGLAPPGV 344

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>CHEB3_PSEAE (Q9HXT8) Chemotaxis response regulator protein-glutamate|
           methylesterase of group 3 operon (EC 3.1.1.61)
          Length = 335

 Score = 32.3 bits (72), Expect = 0.77
 Identities = 24/62 (38%), Positives = 30/62 (48%)
 Frame = -2

Query: 308 RLVCVGGDTPGVAPPTSHPVLTVVAASDVHEAVVLPGHLDVVPGVGVNGVLTVELQLPVG 129
           RLV +G    G   P S  VL     +  + AVVL  H+D V   G+   L  E +LPV 
Sbjct: 152 RLVAIGASAGG---PASLAVLLKQLPASFNAAVVLVQHVDEVFAAGMAEWLASESKLPVR 208

Query: 128 LA 123
           LA
Sbjct: 209 LA 210

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>AL1A1_RAT (P51647) Retinal dehydrogenase 1 (EC 1.2.1.36) (RalDH1) (RALDH 1)|
           (Aldehyde dehydrogenase family 1 member A1) (Aldehyde
           dehydrogenase, cytosolic) (ALHDII) (ALDH-E1)
          Length = 500

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 22/78 (28%), Positives = 33/78 (42%)
 Frame = -2

Query: 290 GDTPGVAPPTSHPVLTVVAASDVHEAVVLPGHLDVVPGVGVNGVLTVELQLPVGLAVLVH 111
           G+T  V P    P+  +  AS + EA   PG +++VPG G      +   + V       
Sbjct: 186 GNTVVVKPAEQTPLTALHMASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTG 245

Query: 110 IAQVAAIALRPQSDAAGK 57
             QV  +      +AAGK
Sbjct: 246 STQVGKLI----KEAAGK 259

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>AL1A1_MOUSE (P24549) Retinal dehydrogenase 1 (EC 1.2.1.36) (RalDH1) (RALDH 1)|
           (Aldehyde dehydrogenase family 1 member A1) (Aldehyde
           dehydrogenase, cytosolic) (ALHDII) (ALDH-E1)
          Length = 500

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 22/78 (28%), Positives = 33/78 (42%)
 Frame = -2

Query: 290 GDTPGVAPPTSHPVLTVVAASDVHEAVVLPGHLDVVPGVGVNGVLTVELQLPVGLAVLVH 111
           G+T  V P    P+  +  AS + EA   PG +++VPG G      +   + V       
Sbjct: 186 GNTVVVKPAEQTPLTALHLASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTG 245

Query: 110 IAQVAAIALRPQSDAAGK 57
             QV  +      +AAGK
Sbjct: 246 STQVGKLI----KEAAGK 259

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>EFTS_ZYMMO (Q9X5E8) Elongation factor Ts (EF-Ts)|
          Length = 307

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 10/84 (11%)
 Frame = -2

Query: 284 TPGVAPPTSHPVLTVVAASDVHEAVVLPG-HLDVVPGVGVNGVL-TVELQLP------VG 129
           T  +A    +  L   A  +V   VV+P  H  V PGVG  GVL  +E + P      +G
Sbjct: 126 TANIATIGENQALRRAALLEVENGVVVPYIHNQVAPGVGKIGVLVALESEAPSDFLESLG 185

Query: 128 LAVLVHIAQVAAIALRPQS--DAA 63
             + +H+A    +AL   S  DAA
Sbjct: 186 KQIAMHVAAATPLALDEDSLDDAA 209

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>VNS1_AHSV6 (P87505) Nonstructural protein NS1|
          Length = 548

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 18/58 (31%), Positives = 29/58 (50%)
 Frame = -2

Query: 209 VLPGHLDVVPGVGVNGVLTVELQLPVGLAVLVHIAQVAAIALRPQSDAAGKFYFFYHS 36
           ++ G L V P  G NG +   L LP+ + V++ + + A   +R    AA  F F  H+
Sbjct: 196 LIEGRLPVCPYTGANGRINAVLHLPLEMEVIMAVQENATQLMR---RAAQDFKFITHA 250

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>VNS1_AHSV4 (Q03068) Nonstructural protein NS1 (Hydrophobic tubular protein)|
          Length = 548

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 18/58 (31%), Positives = 29/58 (50%)
 Frame = -2

Query: 209 VLPGHLDVVPGVGVNGVLTVELQLPVGLAVLVHIAQVAAIALRPQSDAAGKFYFFYHS 36
           ++ G L V P  G NG +   L LP+ + V++ + + A   +R    AA  F F  H+
Sbjct: 196 LIEGRLPVCPYTGANGRINAVLHLPLEMEVIMAVQENATQLMR---RAAQDFKFITHA 250

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>AL1A1_MACFA (Q8HYE4) Retinal dehydrogenase 1 (EC 1.2.1.36) (RalDH1) (RALDH 1)|
           (Aldehyde dehydrogenase family 1 member A1) (Aldehyde
           dehydrogenase, cytosolic) (ALHDII) (ALDH-E1)
          Length = 500

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 20/78 (25%), Positives = 33/78 (42%)
 Frame = -2

Query: 290 GDTPGVAPPTSHPVLTVVAASDVHEAVVLPGHLDVVPGVGVNGVLTVELQLPVGLAVLVH 111
           G+T  V P    P+  +  AS + EA   PG +++VPG G      +   + +       
Sbjct: 186 GNTVVVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTG 245

Query: 110 IAQVAAIALRPQSDAAGK 57
             +V  +      +AAGK
Sbjct: 246 STEVGKLI----KEAAGK 259

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>AL1A1_HUMAN (P00352) Retinal dehydrogenase 1 (EC 1.2.1.36) (RalDH1) (RALDH 1)|
           (Aldehyde dehydrogenase family 1 member A1) (Aldehyde
           dehydrogenase, cytosolic) (ALHDII) (ALDH-E1)
          Length = 500

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 20/78 (25%), Positives = 33/78 (42%)
 Frame = -2

Query: 290 GDTPGVAPPTSHPVLTVVAASDVHEAVVLPGHLDVVPGVGVNGVLTVELQLPVGLAVLVH 111
           G+T  V P    P+  +  AS + EA   PG +++VPG G      +   + +       
Sbjct: 186 GNTVVVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTG 245

Query: 110 IAQVAAIALRPQSDAAGK 57
             +V  +      +AAGK
Sbjct: 246 STEVGKLI----KEAAGK 259

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>CHB1_LYMDI (P43515) Chorion class B protein Ld10 precursor|
          Length = 191

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = -2

Query: 296 VGGDTPGVAPPTSHPVLTVVAASDVHEAVV-LPGHLDVVPGVGVNGVL 156
           +GG  P  +     PV  VVA+ +V+E ++   G L  V  VGV GVL
Sbjct: 78  IGGGLPVSSASAIAPVGLVVASENVYEGILAAAGELPFVGTVGVEGVL 125

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>CXI_CONCE (P69494) I-superfamily conotoxin precursor|
          Length = 67

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = -1

Query: 258 PPSTYGCSGIGCARGRCASGTLGRRTWCR 172
           PP  Y    + C RGRC SG      WCR
Sbjct: 31  PPGVYCTRHLPCCRGRCCSG------WCR 53

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>AL1A1_RABIT (Q8MI17) Retinal dehydrogenase 1 (EC 1.2.1.36) (RalDH1) (RALDH 1)|
           (Aldehyde dehydrogenase family 1 member A1) (Aldehyde
           dehydrogenase, cytosolic) (ALHDII) (ALDH-E1)
          Length = 496

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 20/78 (25%), Positives = 33/78 (42%)
 Frame = -2

Query: 290 GDTPGVAPPTSHPVLTVVAASDVHEAVVLPGHLDVVPGVGVNGVLTVELQLPVGLAVLVH 111
           G+T  V P    P+  +  AS + EA   PG +++VPG G      +   + +       
Sbjct: 182 GNTVIVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTG 241

Query: 110 IAQVAAIALRPQSDAAGK 57
             +V  +      +AAGK
Sbjct: 242 STEVGKLI----KEAAGK 255

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>AL1A4_RAT (P13601) Aldehyde dehydrogenase, cytosolic 1 (EC 1.2.1.3) (ALDH|
           class 1) (ALHDII) (ALDH-E1) (Aldehyde dehydrogenase
           family 1 member A4)
          Length = 500

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 21/78 (26%), Positives = 33/78 (42%)
 Frame = -2

Query: 290 GDTPGVAPPTSHPVLTVVAASDVHEAVVLPGHLDVVPGVGVNGVLTVELQLPVGLAVLVH 111
           G+T  V P    P+  +  AS + EA   PG ++VVPG G      +   + +       
Sbjct: 186 GNTVIVKPAEQTPLTALYMASLIKEAGFPPGVVNVVPGYGSTAGAAISSHMDIDKVSFTG 245

Query: 110 IAQVAAIALRPQSDAAGK 57
             +V  +      +AAGK
Sbjct: 246 STEVGKLI----KEAAGK 259

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>YAGX_ECOLI (P77802) Hypothetical protein yagX precursor|
          Length = 841

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
 Frame = +3

Query: 135 RQLQLNGKDT---INPYTRYDVQVSRKHNGLVHIRCRYNRKYWVARRRGDAWCIAADADE 305
           R   LNGK     ++PY RY+V++    N L        RK  +    G+   I     E
Sbjct: 687 RIFPLNGKRNYLPLSPYGRYEVELQNSKNSLDSYDIVSGRKSRLTLYPGNVAVI-----E 741

Query: 306 PEEDLTNPNCTLIKPIVTVTAAAAAEDG 389
           PE          +K +VTV+    AEDG
Sbjct: 742 PE----------VKQMVTVSGRIRAEDG 759

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>VNS1_AHSV9 (Q85967) Nonstructural protein NS1|
          Length = 548

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 18/58 (31%), Positives = 29/58 (50%)
 Frame = -2

Query: 209 VLPGHLDVVPGVGVNGVLTVELQLPVGLAVLVHIAQVAAIALRPQSDAAGKFYFFYHS 36
           ++ G L V P  GVN  +   L LP+ + V++ + + A   +R    AA  F F  H+
Sbjct: 196 LIEGRLPVCPYTGVNSRINAVLHLPLEMEVIMAVQENATQLMR---RAAQDFKFITHA 250

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>MARE1_HUMAN (Q15691) Microtubule-associated protein RP/EB family member 1|
           (APC-binding protein EB1) (End-binding protein 1) (EB1)
          Length = 267

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
 Frame = +3

Query: 255 VARRRGDAWCIAADA-----DEPEEDLTNPNCTLIKPIVTVTAAAAAEDGHESVMTVRFV 419
           VA R+G    +A        ++P++ LT+ +    +PI T   AAA + G   V     V
Sbjct: 126 VAARQGQETAVAPSLVAPALNKPKKPLTSSSAAPQRPISTQRTAAAPKAGPGVVRKNPGV 185

Query: 420 GAGDGKAGKATRRMTFAK 473
           G GD +A +  +++   K
Sbjct: 186 GNGDDEAAELMQQVNVLK 203

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>PIC_SHIFL (Q54151) Serine protease pic precursor (EC 3.4.21.-) (ShMu)|
          Length = 1372

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 27/111 (24%), Positives = 43/111 (38%), Gaps = 3/111 (2%)
 Frame = +3

Query: 159  DTINPYTRYDVQVSRKHNGLVHIRCRYNRKYWVARRRGDAWCIAADADEPEEDLTNPNCT 338
            DT+N  ++Y+  ++  HN  + I  R+                  DA +    +T+P+  
Sbjct: 751  DTVNDRSQYEGNITLNHNSALDIGSRFTG--------------GIDAYDSAVSITSPDVL 796

Query: 339  LIKPIVTVTAAAAAED-GHESVMTVRFVGA--GDGKAGKATRRMTFAKDDA 482
            L  P     ++    D GH + +   F       GK GK T   T  KD A
Sbjct: 797  LTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTPVKDTA 847

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>PIC_ECOLI (Q7BS42) Serine protease pic precursor (EC 3.4.21.-)|
          Length = 1372

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 27/111 (24%), Positives = 43/111 (38%), Gaps = 3/111 (2%)
 Frame = +3

Query: 159  DTINPYTRYDVQVSRKHNGLVHIRCRYNRKYWVARRRGDAWCIAADADEPEEDLTNPNCT 338
            DT+N  ++Y+  ++  HN  + I  R+                  DA +    +T+P+  
Sbjct: 751  DTVNDRSQYEGNITLNHNSALDIGSRFTG--------------GIDAYDSAVSITSPDVL 796

Query: 339  LIKPIVTVTAAAAAED-GHESVMTVRFVGA--GDGKAGKATRRMTFAKDDA 482
            L  P     ++    D GH + +   F       GK GK T   T  KD A
Sbjct: 797  LTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTPVKDTA 847

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>KRA55_HUMAN (Q701N2) Keratin-associated protein 5-5 (Keratin-associated protein|
           5.5) (Ultrahigh sulfur keratin-associated protein 5.5)
           (Keratin-associated protein 5-11) (Keratin-associated
           protein 5.11)
          Length = 221

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -1

Query: 243 GCSGIGCARGRCASGTLGRRTWCRG 169
           GC G+G   G C SG  GR + C G
Sbjct: 13  GCGGLGSGCGGCGSGCGGRGSGCGG 37

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>ZF64B_HUMAN (Q9NTW7) Zinc finger protein 64, isoforms 3 and 4 (Zinc finger|
           protein 338)
          Length = 645

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +3

Query: 93  GCYLRYVHEHGETYRQLQLNGKDTINPYTRYDVQVSRKHNGLVHIRCRYNRK 248
           GC+ + VH   +  R L+++  D  +     D   SRK N  +H+RC  + K
Sbjct: 305 GCHFKTVHGMKDLDRHLRIHTGDKPHKCEFCDKCFSRKDNLTMHMRCHTSVK 356

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>ZFP64_MOUSE (Q99KE8) Zinc finger protein 64 (Zfp-64)|
          Length = 643

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +3

Query: 93  GCYLRYVHEHGETYRQLQLNGKDTINPYTRYDVQVSRKHNGLVHIRCRYNRK 248
           GC+ + VH   +  R L+++  D  +     D   SRK N  +H+RC  + K
Sbjct: 303 GCHFKTVHGMKDLDRHLRIHTGDKPHKCEFCDKCFSRKDNLTMHMRCHTSVK 354

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>AL1A1_SHEEP (P51977) Retinal dehydrogenase 1 (EC 1.2.1.36) (RalDH1) (RALDH 1)|
           (Aldehyde dehydrogenase family 1 member A1) (Aldehyde
           dehydrogenase, cytosolic) (ALHDII) (ALDH-E1)
          Length = 500

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 20/78 (25%), Positives = 32/78 (41%)
 Frame = -2

Query: 290 GDTPGVAPPTSHPVLTVVAASDVHEAVVLPGHLDVVPGVGVNGVLTVELQLPVGLAVLVH 111
           G+T  V P    P+  +   S + EA   PG +++VPG G      +   + V       
Sbjct: 186 GNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTG 245

Query: 110 IAQVAAIALRPQSDAAGK 57
             +V  +      +AAGK
Sbjct: 246 STEVGKLI----KEAAGK 259

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>AL1A1_HORSE (P15437) Retinal dehydrogenase 1 (EC 1.2.1.36) (RalDH1) (RALDH 1)|
           (Aldehyde dehydrogenase family 1 member A1) (Aldehyde
           dehydrogenase, cytosolic) (ALHDII) (ALDH-E1)
          Length = 500

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 19/78 (24%), Positives = 33/78 (42%)
 Frame = -2

Query: 290 GDTPGVAPPTSHPVLTVVAASDVHEAVVLPGHLDVVPGVGVNGVLTVELQLPVGLAVLVH 111
           G+T  V P    P+  +  A+ + EA   PG +++VPG G      +   + +       
Sbjct: 186 GNTVVVKPAEQTPLSALHVATLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTG 245

Query: 110 IAQVAAIALRPQSDAAGK 57
             +V  +      +AAGK
Sbjct: 246 STEVGKLI----KEAAGK 259

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>AL1A1_BOVIN (P48644) Retinal dehydrogenase 1 (EC 1.2.1.36) (RalDH1) (RALDH 1)|
           (Aldehyde dehydrogenase family 1 member A1) (Aldehyde
           dehydrogenase, cytosolic) (ALHDII) (ALDH-E1)
          Length = 500

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 20/78 (25%), Positives = 32/78 (41%)
 Frame = -2

Query: 290 GDTPGVAPPTSHPVLTVVAASDVHEAVVLPGHLDVVPGVGVNGVLTVELQLPVGLAVLVH 111
           G+T  V P    P+  +   S + EA   PG +++VPG G      +   + V       
Sbjct: 186 GNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTG 245

Query: 110 IAQVAAIALRPQSDAAGK 57
             +V  +      +AAGK
Sbjct: 246 STEVGKLI----KEAAGK 259

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>FBX46_HUMAN (Q6PJ61) F-box only protein 46 (F-box only protein 34-like)|
          Length = 646

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 25/105 (23%), Positives = 35/105 (33%)
 Frame = +3

Query: 174 YTRYDVQVSRKHNGLVHIRCRYNRKYWVARRRGDAWCIAADADEPEEDLTNPNCTLIKPI 353
           Y + DV + R H    H    Y R YW+  RR D                 P C L    
Sbjct: 537 YEKGDVSLCRWHPKPYHHDLPYGRSYWMCCRRADR--------------ETPGCRL---- 578

Query: 354 VTVTAAAAAEDGHESVMTVRFVGAGDGKAGKATRRMTFAKDDAAP 488
                       H++   +   G G G+AG+   R T  +   +P
Sbjct: 579 ----------GLHDNNWVLPCNGPGGGRAGREEGRSTRGRGGESP 613


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,878,140
Number of Sequences: 219361
Number of extensions: 1297286
Number of successful extensions: 4676
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 4466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4673
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3754426130
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result