ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd26e21 |
|---|---|
| Clone Library Name | barley_pub |
>BSPA_POPDE (Q07469) Bark storage protein A precursor| Length = 312 Score = 79.7 bits (195), Expect = 6e-15 Identities = 44/137 (32%), Positives = 72/137 (52%), Gaps = 1/137 (0%) Frame = +1 Query: 160 VGLVVPNTYEMVPVLESPSFVASKSIPNMDIQGRRFRFGTIEGQSVVMVMTGLSMLNAGL 339 +GLV + + +S + ++DI GRRF GT+ G S+V V TG +N Sbjct: 29 LGLVFTSDNNERALQDSGLYSPDSEDSSVDIAGRRFHSGTLNGSSIVYVKTGSPSVNMAT 88 Query: 340 TTQMLLSLFRVKGIVHWGIAGNANEDLQI-GDVTIPEYWAHVSLWNWQRFGDGKDNELPL 516 T Q+LL F + G++++G AG+ ++ + GDV++P+ A +WNW++FG K + Sbjct: 89 TLQILLVRFNIHGVIYFGNAGSLDKKTMVPGDVSVPQAVAFTGVWNWKKFGSEKGKLV-- 146 Query: 517 EAAGDYTRESGRPQLLG 567 GD+ LLG Sbjct: 147 --FGDFNYPENGENLLG 161
>BSPB_POPDE (Q09117) Bark storage protein B precursor| Length = 312 Score = 72.4 bits (176), Expect = 9e-13 Identities = 42/137 (30%), Positives = 71/137 (51%), Gaps = 1/137 (0%) Frame = +1 Query: 160 VGLVVPNTYEMVPVLESPSFVASKSIPNMDIQGRRFRFGTIEGQSVVMVMTGLSMLNAGL 339 +GLV + + +S + ++DI GRRF GT+ G S+V V TG +N Sbjct: 29 LGLVFTSDNNERALQDSGLYSPDSEDSSVDIAGRRFHSGTLNGSSIVYVKTGSHSVNMAT 88 Query: 340 TTQMLLSLFRVKGIVHWGIAGNANEDLQI-GDVTIPEYWAHVSLWNWQRFGDGKDNELPL 516 T Q+LL+ F + G++++G AG+ ++ + GDV++P+ A + NW++F K + Sbjct: 89 TLQILLARFSIHGVIYFGNAGSLDKKTMVPGDVSVPQAVAFTGVCNWKKFRSEKGKLV-- 146 Query: 517 EAAGDYTRESGRPQLLG 567 GD+ LLG Sbjct: 147 --FGDFNYPENGENLLG 161
>Y2293_MYCTU (Q50673) Hypothetical protein Rv2293c/MT2350 precursor| Length = 246 Score = 47.4 bits (111), Expect = 3e-05 Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 6/71 (8%) Frame = +1 Query: 259 RRFRFGTIEGQSVVMVMTGLSMLNAGLTTQMLLSLF------RVKGIVHWGIAGNANEDL 420 RR+ G+I G+ V++ MTG+ ++NA TT+ + F + ++ G+AG A Sbjct: 69 RRYYLGSISGKKVIVAMTGIGLVNATNTTETAFARFTCASSIAIAAVMFSGVAGGAGR-T 127 Query: 421 QIGDVTIPEYW 453 IGDV IP W Sbjct: 128 SIGDVAIPARW 138
>MTNN_MYCTU (P67656) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methylthioadenosine| nucleosidase) (S-adenosylhomocysteine nucleosidase) Length = 255 Score = 44.3 bits (103), Expect = 3e-04 Identities = 21/61 (34%), Positives = 33/61 (54%) Frame = +1 Query: 265 FRFGTIEGQSVVMVMTGLSMLNAGLTTQMLLSLFRVKGIVHWGIAGNANEDLQIGDVTIP 444 F G ++ VV+ G+ +N GLT +L F + IV G+AG + +L IGD+ I Sbjct: 35 FDSGQLDAHRVVLAAAGMGKVNTGLTATLLADRFGCRTIVFTGVAGGLDPELCIGDIVIA 94 Query: 445 E 447 + Sbjct: 95 D 95
>MTNN_MYCBO (P67657) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methylthioadenosine| nucleosidase) (S-adenosylhomocysteine nucleosidase) Length = 255 Score = 44.3 bits (103), Expect = 3e-04 Identities = 21/61 (34%), Positives = 33/61 (54%) Frame = +1 Query: 265 FRFGTIEGQSVVMVMTGLSMLNAGLTTQMLLSLFRVKGIVHWGIAGNANEDLQIGDVTIP 444 F G ++ VV+ G+ +N GLT +L F + IV G+AG + +L IGD+ I Sbjct: 35 FDSGQLDAHRVVLAAAGMGKVNTGLTATLLADRFGCRTIVFTGVAGGLDPELCIGDIVIA 94 Query: 445 E 447 + Sbjct: 95 D 95
>MTNN_BUCAP (O51931) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methylthioadenosine| nucleosidase) (S-adenosylhomocysteine nucleosidase) Length = 235 Score = 43.9 bits (102), Expect = 3e-04 Identities = 25/96 (26%), Positives = 54/96 (56%) Frame = +1 Query: 160 VGLVVPNTYEMVPVLESPSFVASKSIPNMDIQGRRFRFGTIEGQSVVMVMTGLSMLNAGL 339 +G++ E+ + E + + K I N+ I GT + + ++++G+ ++A + Sbjct: 3 IGIIGAIEQEIRKIKEIINNLKIKKIGNIKIYT-----GTFKKIEIFLILSGIGKVSASM 57 Query: 340 TTQMLLSLFRVKGIVHWGIAGNANEDLQIGDVTIPE 447 +T + ++LF+ I++ G AG+ N L+IGD+ IP+ Sbjct: 58 STTISINLFQPDFIINSGSAGSLNACLKIGDIIIPK 93
>MTNN_BUCAI (P57306) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methylthioadenosine| nucleosidase) (S-adenosylhomocysteine nucleosidase) Length = 232 Score = 41.2 bits (95), Expect = 0.002 Identities = 17/58 (29%), Positives = 35/58 (60%) Frame = +1 Query: 274 GTIEGQSVVMVMTGLSMLNAGLTTQMLLSLFRVKGIVHWGIAGNANEDLQIGDVTIPE 447 G + V ++ +G+ ++A + T +L+ L++ I++ G AG+ L+IGD+ IP+ Sbjct: 36 GKFKSHDVFLIKSGIGKVSASVATMILIDLYKPDTIINSGSAGSLQSFLKIGDIIIPK 93
>MTNN_TREPA (P96122) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methylthioadenosine| nucleosidase) (S-adenosylhomocysteine nucleosidase) Length = 269 Score = 39.7 bits (91), Expect = 0.007 Identities = 22/62 (35%), Positives = 35/62 (56%) Frame = +1 Query: 256 GRRFRFGTIEGQSVVMVMTGLSMLNAGLTTQMLLSLFRVKGIVHWGIAGNANEDLQIGDV 435 G F ++ VV V G+ +NA L TQ+L+S F + +++ GIAG +E L + DV Sbjct: 29 GLTFYVVSVGALQVVYVCGGVGKVNAALCTQLLISEFGARVLINTGIAGALDERLCVFDV 88 Query: 436 TI 441 + Sbjct: 89 LV 90
>MTNN_HELPY (O24915) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methylthioadenosine| nucleosidase) (S-adenosylhomocysteine nucleosidase) Length = 231 Score = 38.9 bits (89), Expect = 0.011 Identities = 20/94 (21%), Positives = 48/94 (51%) Frame = +1 Query: 160 VGLVVPNTYEMVPVLESPSFVASKSIPNMDIQGRRFRFGTIEGQSVVMVMTGLSMLNAGL 339 +G++ E+ P+LE + + + G F G + +++ + + +++ L Sbjct: 5 IGILGAMREEITPILE----LFGVDFEEIPLGGNVFHKGVYHNKEIIVAYSKIGKVHSTL 60 Query: 340 TTQMLLSLFRVKGIVHWGIAGNANEDLQIGDVTI 441 TT ++ F V+ ++ G+AG+ +DL+I D+ + Sbjct: 61 TTTSMILAFGVQKVLFSGVAGSLVKDLKINDLLV 94
>MTNN_HELPJ (Q9ZMY2) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methylthioadenosine| nucleosidase) (S-adenosylhomocysteine nucleosidase) Length = 230 Score = 38.9 bits (89), Expect = 0.011 Identities = 20/94 (21%), Positives = 48/94 (51%) Frame = +1 Query: 160 VGLVVPNTYEMVPVLESPSFVASKSIPNMDIQGRRFRFGTIEGQSVVMVMTGLSMLNAGL 339 +G++ E+ P+LE + + + G F G + +++ + + +++ L Sbjct: 4 IGILGAMREEITPILE----LFGVDFEEIPLGGNVFHKGVYHNKEIIVAYSKIGKVHSTL 59 Query: 340 TTQMLLSLFRVKGIVHWGIAGNANEDLQIGDVTI 441 TT ++ F V+ ++ G+AG+ +DL+I D+ + Sbjct: 60 TTTSMILAFGVQKVLFSGVAGSLVKDLKINDLLV 93
>DEOD_LACLC (O32810) Purine nucleoside phosphorylase deoD-type (EC 2.4.2.1)| (PNP) Length = 234 Score = 38.5 bits (88), Expect = 0.015 Identities = 20/64 (31%), Positives = 36/64 (56%) Frame = +1 Query: 274 GTIEGQSVVMVMTGLSMLNAGLTTQMLLSLFRVKGIVHWGIAGNANEDLQIGDVTIPEYW 453 GT +G V ++ TG+ + + + L++ + VK ++ G AG+ NED+ I D+ I + Sbjct: 51 GTYKGHRVSVMGTGMGIPSISIYANELITEYGVKRLIRVGTAGSVNEDVHIRDLVIGQAA 110 Query: 454 AHVS 465 A S Sbjct: 111 ATTS 114
>DEOD_LACLA (Q9CH10) Purine nucleoside phosphorylase deoD-type (EC 2.4.2.1)| (PNP) Length = 234 Score = 38.5 bits (88), Expect = 0.015 Identities = 20/64 (31%), Positives = 36/64 (56%) Frame = +1 Query: 274 GTIEGQSVVMVMTGLSMLNAGLTTQMLLSLFRVKGIVHWGIAGNANEDLQIGDVTIPEYW 453 GT +G V ++ TG+ + + + L++ + VK ++ G AG+ NED+ I D+ I + Sbjct: 51 GTYKGHRVSVMGTGMGIPSISIYANELITEYGVKRLIRVGTAGSVNEDVHIRDLVIGQAA 110 Query: 454 AHVS 465 A S Sbjct: 111 ATTS 114
>DEOD_STRTR (Q56037) Purine nucleoside phosphorylase deoD-type (EC 2.4.2.1)| (PNP) (Fragment) Length = 216 Score = 34.3 bits (77), Expect = 0.27 Identities = 14/58 (24%), Positives = 35/58 (60%) Frame = +1 Query: 274 GTIEGQSVVMVMTGLSMLNAGLTTQMLLSLFRVKGIVHWGIAGNANEDLQIGDVTIPE 447 GT +G+ + ++ TG+ M + + + L+ + VK ++ G AG+ NE++ + ++ + + Sbjct: 30 GTYKGERISVMGTGMGMPSISIYARELIVDYGVKKLIRVGTAGSLNENVHVRELVLAQ 87
>ASSY_STRMU (Q8CWZ0) Argininosuccinate synthase (EC 6.3.4.5)| (Citrulline--aspartate ligase) Length = 396 Score = 33.9 bits (76), Expect = 0.36 Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 9/85 (10%) Frame = -2 Query: 369 PEQAQQHLGGQTSVEHAQSCHDHDDA-------LAFDGSKAKPSPLDVHVRDALAG-HEA 214 PE+A G SVE A ++ D +A DG + K + L + + LAG H Sbjct: 196 PEEA---FGITNSVEEAPDKAEYVDITFKEGKPVALDGQEMKLADL-IQKLNVLAGKHGV 251 Query: 213 GRLEH-RNHLVGVGHDEADERPGAV 142 GR++H N LVG+ E E PGAV Sbjct: 252 GRIDHVENRLVGIKSREIYECPGAV 276
>SRY_MUSSI (Q62565) Sex-determining region Y protein (Testis-determining| factor) Length = 311 Score = 33.1 bits (74), Expect = 0.61 Identities = 13/41 (31%), Positives = 22/41 (53%) Frame = +3 Query: 225 QQEHP*HGHPRAKVSLWNHRRPKRRHGHDRTEHAQRWSDHP 347 QQ+ H H + + L NH +++ HD + Q++ DHP Sbjct: 200 QQQQQFHDHQQQQQQLHNHHHQQQQQFHDYPQQQQQFHDHP 240
>Y4JS_RHISN (P55519) Hypothetical 44.8 kDa protein y4jS| Length = 413 Score = 32.0 bits (71), Expect = 1.4 Identities = 14/56 (25%), Positives = 29/56 (51%) Frame = +1 Query: 268 RFGTIEGQSVVMVMTGLSMLNAGLTTQMLLSLFRVKGIVHWGIAGNANEDLQIGDV 435 +FG ++ + + + ++ AG+T ++LF+ K +V GI D +GD+ Sbjct: 198 KFGANTVSAICVCLPQMGLVAAGVTAAKAITLFKPKLVVMTGICAGRKGDCDLGDI 253
>CDC54_YEAST (P30665) Cell division control protein 54| Length = 933 Score = 31.6 bits (70), Expect = 1.8 Identities = 20/60 (33%), Positives = 27/60 (45%) Frame = +1 Query: 169 VVPNTYEMVPVLESPSFVASKSIPNMDIQGRRFRFGTIEGQSVVMVMTGLSMLNAGLTTQ 348 VVPN + P L SP+ S S DI GR +G+ + G S LN ++Q Sbjct: 19 VVPNPDSVPPQLSSPALFYSSSSSQGDIYGRNNSQNLSQGEGNIRAAIGSSPLNFPSSSQ 78
>ASSY_BACLD (Q65G67) Argininosuccinate synthase (EC 6.3.4.5)| (Citrulline--aspartate ligase) Length = 403 Score = 31.6 bits (70), Expect = 1.8 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Frame = -2 Query: 291 LAFDGSKAKPSPLDVHVRDALAGHEAGRLEH-RNHLVGVGHDEADERPGAV 142 ++ DG+ S L + + + H GR++H N LVG+ E E PGA+ Sbjct: 228 VSIDGTHYPLSDLILKLNELAGAHGVGRIDHVENRLVGIKSREVYECPGAM 278
>ASSY_BACSU (O34347) Argininosuccinate synthase (EC 6.3.4.5)| (Citrulline--aspartate ligase) Length = 403 Score = 31.2 bits (69), Expect = 2.3 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Frame = -2 Query: 291 LAFDGSKAKPSPLDVHVRDALAGHEAGRLEH-RNHLVGVGHDEADERPGAV 142 ++ DG S L + + + H GR++H N LVG+ E E PGA+ Sbjct: 228 VSIDGVSYSLSELILKLNEMAGAHGVGRIDHVENRLVGIKSREVYECPGAM 278
>HUTI_PSESM (Q87UL9) Imidazolonepropionase (EC 3.5.2.7)| (Imidazolone-5-propionate hydrolase) Length = 401 Score = 30.8 bits (68), Expect = 3.0 Identities = 17/67 (25%), Positives = 27/67 (40%) Frame = -2 Query: 306 DHDDALAFDGSKAKPSPLDVHVRDALAGHEAGRLEHRNHLVGVGHDEADERPGAVRPADG 127 +HD+ + G+ P +D H G+ +G E R L GV + E G + Sbjct: 46 EHDNCIDLGGAWVTPGLIDCHTHTVFGGNRSGEFEQR--LQGVSYAEIAAAGGGIASTVR 103 Query: 126 CPRLLSD 106 R S+ Sbjct: 104 ATRAASE 110
>ASSY_GEOKA (Q5KW94) Argininosuccinate synthase (EC 6.3.4.5)| (Citrulline--aspartate ligase) Length = 406 Score = 30.4 bits (67), Expect = 4.0 Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 2/46 (4%) Frame = -2 Query: 273 KAKPSPLDVHVRDALAG-HEAGRLEH-RNHLVGVGHDEADERPGAV 142 KA P + +ALAG H GR++H N LVG+ E E PGA+ Sbjct: 232 KAYPLAQLILELNALAGKHGVGRIDHVENRLVGIKSREVYECPGAI 277
>C71BC_ARATH (Q9ZU07) Cytochrome P450 71B12 (EC 1.14.-.-)| Length = 496 Score = 30.4 bits (67), Expect = 4.0 Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%) Frame = +1 Query: 364 FRVKGIVHWGIAGNANEDLQIGDVTIP-EYWAHVSLW 471 FR+ +V I A++D++IG IP + W HV++W Sbjct: 356 FRINPLVPLLIPREASKDVKIGGYNIPKKTWIHVNIW 392
>MAP2_MOUSE (P20357) Microtubule-associated protein 2 (MAP 2)| Length = 1828 Score = 30.4 bits (67), Expect = 4.0 Identities = 15/45 (33%), Positives = 22/45 (48%) Frame = -2 Query: 369 PEQAQQHLGGQTSVEHAQSCHDHDDALAFDGSKAKPSPLDVHVRD 235 PE+ ++ L V + D L F +KA+PS LD+ V D Sbjct: 1014 PEKTEKGLSSVPEVAEVEPTTKADQGLDFAATKAEPSQLDIKVSD 1058
>MK15_RAT (Q9Z2A6) Mitogen-activated protein kinase 15 (EC 2.7.11.24)| (Extracellular signal-regulated kinase 7) Length = 547 Score = 30.4 bits (67), Expect = 4.0 Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 2/38 (5%) Frame = +3 Query: 285 RPKRRHGHDRTEHAQ--RWSDHPDAAEPVPGEGHRPLG 392 +P+ HGHD EH + R S P P PG G RP G Sbjct: 396 KPQNGHGHD-PEHVEVRRQSSDPLYQLPPPGSGERPPG 432
>DPO1_ANATH (Q59156) DNA polymerase I (EC 2.7.7.7) (Pol I)| Length = 850 Score = 30.0 bits (66), Expect = 5.2 Identities = 21/83 (25%), Positives = 37/83 (44%) Frame = +1 Query: 202 LESPSFVASKSIPNMDIQGRRFRFGTIEGQSVVMVMTGLSMLNAGLTTQMLLSLFRVKGI 381 LES S + SK IP M +QG + + + + V + + ++ L + + ++ +K I Sbjct: 309 LESISQIRSKEIPLMFVQGEKCFYLYDQESNTVFITSNKLLIEEILKSDTVKIMYDLKNI 368 Query: 382 VHWGIAGNANEDLQIGDVTIPEY 450 H + N DV I Y Sbjct: 369 FHQLNLEDTNNIKNCEDVMIASY 391
>NORR2_RALEU (Q9K4U8) Nitric oxide reductase transcription regulator norR2| Length = 521 Score = 29.6 bits (65), Expect = 6.7 Identities = 20/58 (34%), Positives = 23/58 (39%) Frame = -2 Query: 276 SKAKPSPLDVHVRDALAGHEAGRLEHRNHLVGVGHDEADERPGAVRPADGCPRLLSDV 103 S+ + PL VHV A E H G ERPG ADG P L +V Sbjct: 238 SRRRAQPL-VHVNCAALPESLAESELFGHARGAFSGATGERPGRFEAADGQPLFLDEV 294
>ASSY_STRT2 (Q5M2K2) Argininosuccinate synthase (EC 6.3.4.5)| (Citrulline--aspartate ligase) Length = 399 Score = 29.6 bits (65), Expect = 6.7 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Frame = -2 Query: 291 LAFDGSKAKPSPLDVHVRDALAGHEAGRLEH-RNHLVGVGHDEADERPGAV 142 +A +G + K + L + H GR++H N LVG+ E E PGA+ Sbjct: 226 VALNGKEMKLADLIQEMNVIAGKHGVGRIDHVENRLVGIKSREIYECPGAI 276
>ASSY_STRT1 (Q5LXZ8) Argininosuccinate synthase (EC 6.3.4.5)| (Citrulline--aspartate ligase) Length = 399 Score = 29.6 bits (65), Expect = 6.7 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Frame = -2 Query: 291 LAFDGSKAKPSPLDVHVRDALAGHEAGRLEH-RNHLVGVGHDEADERPGAV 142 +A +G + K + L + H GR++H N LVG+ E E PGA+ Sbjct: 226 VALNGKEMKLADLIQEMNVIAGKHGVGRIDHVENRLVGIKSREIYECPGAI 276
>ASSY_STRR6 (Q8DRI5) Argininosuccinate synthase (EC 6.3.4.5)| (Citrulline--aspartate ligase) Length = 398 Score = 29.6 bits (65), Expect = 6.7 Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 8/84 (9%) Frame = -2 Query: 369 PEQAQQHLGGQTSVEHAQSCHDHDDA-------LAFDGSKAKPSPLDVHVRDALAGHEAG 211 PE+A G TS E A ++ + ++ +G K + L + + H G Sbjct: 196 PEEA---FGITTSPEQAPDMPEYIEIEFSEGVPVSLNGEVLKLADLIQKLNEIAGKHGVG 252 Query: 210 RLEH-RNHLVGVGHDEADERPGAV 142 R++H N LVG+ E E PGAV Sbjct: 253 RIDHVENRLVGIKSREIYECPGAV 276
>C71BB_ARATH (P58049) Cytochrome P450 71B11 (EC 1.14.-.-)| Length = 496 Score = 29.6 bits (65), Expect = 6.7 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%) Frame = +1 Query: 364 FRVKGIVHWGIAGNANEDLQIGDVTIP-EYWAHVSLW 471 FRV +V I A++D++IG IP + W HV++W Sbjct: 356 FRVLPLVPLLIPREASKDVKIGGYDIPKKTWIHVNIW 392
>GCH1_CAEEL (Q19980) GTP cyclohydrolase I (EC 3.5.4.16) (GTP-CH-I)| Length = 223 Score = 29.6 bits (65), Expect = 6.7 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = +1 Query: 280 IEGQSVVMVMTGLSMLNAGLTTQMLLSLFR 369 IE + MVM G+ +NA TT +L +FR Sbjct: 178 IEASHMCMVMRGVQKINASTTTSCMLGVFR 207
>SEPP1_BOVIN (P49907) Selenoprotein P-like protein precursor| Length = 402 Score = 29.3 bits (64), Expect = 8.8 Identities = 20/60 (33%), Positives = 21/60 (35%), Gaps = 4/60 (6%) Frame = +3 Query: 210 AQLRGQQEHP*HGHPRAKVSLWNHRRPKRRHGHDRTEHAQRWS----DHPDAAEPVPGEG 377 A R HP H HP H P HGH E+A D PD E P G Sbjct: 200 ASQRHHHPHP-HSHPHPHPHPHPHPHPHPHHGHQLHENAHLSESPKPDTPDTPENPPTSG 258
>GIDA_AQUAE (O66962) tRNA uridine 5-carboxymethylaminomethyl modification| enzyme gidA (Glucose-inhibited division protein A) Length = 617 Score = 29.3 bits (64), Expect = 8.8 Identities = 15/49 (30%), Positives = 28/49 (57%) Frame = -3 Query: 413 SLALPAMPQWTMPFTRNRLSSIWVVRPALSMLSPVMTMTTLWPSMVPKR 267 S +LP QW M + L ++ ++RPA ++ V+ T L+P++ K+ Sbjct: 320 STSLPEEVQWEMYRSIPGLENVVLIRPAYAIEYDVVPPTELYPTLETKK 368
>GLND_PASMU (Q9CNH1) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 864 Score = 29.3 bits (64), Expect = 8.8 Identities = 15/27 (55%), Positives = 15/27 (55%) Frame = +1 Query: 475 WQRFGDGKDNELPLEAAGDYTRESGRP 555 W RFG KDN L L A G Y RE P Sbjct: 55 WLRFGLVKDNTLTLIAVGGYGREEMFP 81 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 75,465,779 Number of Sequences: 219361 Number of extensions: 1461436 Number of successful extensions: 5098 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 4899 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5087 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5101629520 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
