ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd26e17 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ310379.1|HVU310379 Hordeum vulgare mRNA for putative nuclear protein (s40 gene) Length = 417 Score = 480 bits (242), Expect = e-132 Identities = 242/242 (100%) Strand = Plus / Plus Query: 13 cggcgtcgtccgacgggagcggcagtggcaacgacgactgcagcgacggcgacgtccgat 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 176 cggcgtcgtccgacgggagcggcagtggcaacgacgactgcagcgacggcgacgtccgat 235 Query: 73 gtaccaacgacgcgaagaggaacgtgccgccccacgtcctggccgagcgacggcggaggc 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 236 gtaccaacgacgcgaagaggaacgtgccgccccacgtcctggccgagcgacggcggaggc 295 Query: 133 tcgccgggaggtcgacggcggcctactccatgtgcaccggcaaagggaggacgctcaaag 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 296 tcgccgggaggtcgacggcggcctactccatgtgcaccggcaaagggaggacgctcaaag 355 Query: 193 ggcgggacctccgcaatatcaggaacctcgtcctcaggatgaccggattcatcgagaagt 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 356 ggcgggacctccgcaatatcaggaacctcgtcctcaggatgaccggattcatcgagaagt 415 Query: 253 ga 254 || Sbjct: 416 ga 417
>gb|AC121365.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0053E05, complete sequence Length = 196284 Score = 155 bits (78), Expect = 2e-34 Identities = 102/110 (92%) Strand = Plus / Plus Query: 146 gacggcggcctactccatgtgcaccggcaaagggaggacgctcaaagggcgggacctccg 205 ||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 12897 gacggcggcgtactccatgtgcgccggcaaggggaggacgctcaaagggcgggacctccg 12956 Query: 206 caatatcaggaacctcgtcctcaggatgaccggattcatcgagaagtgaa 255 ||| ||||||||||||||||| ||||||||||||||||||||| |||| Sbjct: 12957 caacgtcaggaacctcgtcctccagatgaccggattcatcgagaaatgaa 13006
>gb|AC111015.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1131_E09, complete sequence Length = 94399 Score = 155 bits (78), Expect = 2e-34 Identities = 102/110 (92%) Strand = Plus / Plus Query: 146 gacggcggcctactccatgtgcaccggcaaagggaggacgctcaaagggcgggacctccg 205 ||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 79189 gacggcggcgtactccatgtgcgccggcaaggggaggacgctcaaagggcgggacctccg 79248 Query: 206 caatatcaggaacctcgtcctcaggatgaccggattcatcgagaagtgaa 255 ||| ||||||||||||||||| ||||||||||||||||||||| |||| Sbjct: 79249 caacgtcaggaacctcgtcctccagatgaccggattcatcgagaaatgaa 79298
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 155 bits (78), Expect = 2e-34 Identities = 102/110 (92%) Strand = Plus / Plus Query: 146 gacggcggcctactccatgtgcaccggcaaagggaggacgctcaaagggcgggacctccg 205 ||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 26161849 gacggcggcgtactccatgtgcgccggcaaggggaggacgctcaaagggcgggacctccg 26161908 Query: 206 caatatcaggaacctcgtcctcaggatgaccggattcatcgagaagtgaa 255 ||| ||||||||||||||||| ||||||||||||||||||||| |||| Sbjct: 26161909 caacgtcaggaacctcgtcctccagatgaccggattcatcgagaaatgaa 26161958
>dbj|AK109325.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-H07, full insert sequence Length = 744 Score = 155 bits (78), Expect = 2e-34 Identities = 102/110 (92%) Strand = Plus / Plus Query: 146 gacggcggcctactccatgtgcaccggcaaagggaggacgctcaaagggcgggacctccg 205 ||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 366 gacggcggcgtactccatgtgcgccggcaaggggaggacgctcaaagggcgggacctccg 425 Query: 206 caatatcaggaacctcgtcctcaggatgaccggattcatcgagaagtgaa 255 ||| ||||||||||||||||| ||||||||||||||||||||| |||| Sbjct: 426 caacgtcaggaacctcgtcctccagatgaccggattcatcgagaaatgaa 475
>ref|XM_475741.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 429 Score = 153 bits (77), Expect = 7e-34 Identities = 98/105 (93%) Strand = Plus / Plus Query: 146 gacggcggcctactccatgtgcaccggcaaagggaggacgctcaaagggcgggacctccg 205 ||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 321 gacggcggcgtactccatgtgcgccggcaaggggaggacgctcaaagggcgggacctccg 380 Query: 206 caatatcaggaacctcgtcctcaggatgaccggattcatcgagaa 250 ||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 381 caacgtcaggaacctcgtcctccagatgaccggattcatcgagaa 425
>gb|AY112488.1| Zea mays CL43678_1 mRNA sequence Length = 595 Score = 109 bits (55), Expect = 9e-21 Identities = 91/103 (88%) Strand = Plus / Minus Query: 146 gacggcggcctactccatgtgcaccggcaaagggaggacgctcaaagggcgggacctccg 205 |||||||||||||||||||||| | ||||| |||||||||||||||||||| |||||||| Sbjct: 350 gacggcggcctactccatgtgcgctggcaaggggaggacgctcaaagggcgcgacctccg 291 Query: 206 caatatcaggaacctcgtcctcaggatgaccggattcatcgag 248 | | || || |||||||||||| |||||| || ||||||||| Sbjct: 290 cgacgtccgggacctcgtcctcaagatgacaggcttcatcgag 248
>ref|XM_477770.1| Oryza sativa (japonica cultivar-group), mRNA Length = 474 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 36 agtggcaacgacgactgcagcgacggcgacg 66 |||||| |||||||||| ||||||||||||| Sbjct: 80 agtggcgacgacgactggagcgacggcgacg 110
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 36 agtggcaacgacgactgcagcgacggcgacg 66 |||||| |||||||||| ||||||||||||| Sbjct: 14042394 agtggcgacgacgactggagcgacggcgacg 14042424
>dbj|AP003830.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1423_A11 Length = 98377 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 36 agtggcaacgacgactgcagcgacggcgacg 66 |||||| |||||||||| ||||||||||||| Sbjct: 18353 agtggcgacgacgactggagcgacggcgacg 18383
>gb|AC144625.3| Mus musculus BAC clone RP24-196P19 from chromosome 5, complete sequence Length = 145348 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 464 aaatgtacatttctgagaaaca 485 |||||||||||||||||||||| Sbjct: 82054 aaatgtacatttctgagaaaca 82075
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 177 gggaggacgctcaaagggcgggacctccgc 206 |||||||||||||| ||||| ||||||||| Sbjct: 760048 gggaggacgctcaaggggcgcgacctccgc 760077 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 394 ttaattaattaattttatctg 414 ||||||||||||||||||||| Sbjct: 4155970 ttaattaattaattttatctg 4155950 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 43 acgacgactgcagcgacggcgacg 66 |||||||||| ||||||||||||| Sbjct: 25509327 acgacgactggagcgacggcgacg 25509304
>emb|AL035536.1|SPBC83 S.pombe chromosome II cosmid c83 Length = 37235 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 389 tctgtttaattaattaatttta 410 |||||||||||||||||||||| Sbjct: 31990 tctgtttaattaattaatttta 31969
>gb|AC008691.7| Homo sapiens chromosome 5 clone CTB-63A22, complete sequence Length = 153267 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 388 ctctgtttaattaattaatttt 409 |||||||||||||||||||||| Sbjct: 133272 ctctgtttaattaattaatttt 133293
>gb|AC011348.4| Homo sapiens chromosome 5 clone CTC-303E13, complete sequence Length = 110104 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 388 ctctgtttaattaattaatttt 409 |||||||||||||||||||||| Sbjct: 24343 ctctgtttaattaattaatttt 24364
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 177 gggaggacgctcaaagggcgggacctccgc 206 |||||||||||||| ||||| ||||||||| Sbjct: 760046 gggaggacgctcaaggggcgcgacctccgc 760075 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 394 ttaattaattaattttatctg 414 ||||||||||||||||||||| Sbjct: 4156079 ttaattaattaattttatctg 4156059 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 43 acgacgactgcagcgacggcgacg 66 |||||||||| ||||||||||||| Sbjct: 25600636 acgacgactggagcgacggcgacg 25600613
>emb|BX248231.22| Zebrafish DNA sequence from clone CH211-137C4 in linkage group 8, complete sequence Length = 150101 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 393 tttaattaattaattttatctg 414 |||||||||||||||||||||| Sbjct: 79017 tttaattaattaattttatctg 79038
>gb|AC134237.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0090O10, complete sequence Length = 162132 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 177 gggaggacgctcaaagggcgggacctccgc 206 |||||||||||||| ||||| ||||||||| Sbjct: 55593 gggaggacgctcaaggggcgcgacctccgc 55622
>gb|AC121490.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0005F16, complete sequence Length = 160053 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 177 gggaggacgctcaaagggcgggacctccgc 206 |||||||||||||| ||||| ||||||||| Sbjct: 145929 gggaggacgctcaaggggcgcgacctccgc 145958
>dbj|AK119700.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-D07, full insert sequence Length = 777 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 177 gggaggacgctcaaagggcgggacctccgc 206 |||||||||||||| ||||| ||||||||| Sbjct: 626 gggaggacgctcaaggggcgcgacctccgc 655
>dbj|AK107900.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-F07, full insert sequence Length = 804 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 177 gggaggacgctcaaagggcgggacctccgc 206 |||||||||||||| ||||| ||||||||| Sbjct: 626 gggaggacgctcaaggggcgcgacctccgc 655
>gb|AC109249.17| Mus musculus chromosome 13, clone RP23-78E1, complete sequence Length = 203574 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 466 atgtacatttctgagaaacag 486 ||||||||||||||||||||| Sbjct: 172895 atgtacatttctgagaaacag 172915
>gb|AC142146.3| Mus musculus BAC clone RP24-74D8 from chromosome 9, complete sequence Length = 170429 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 452 ttgctcaggaataaatgtaca 472 ||||||||||||||||||||| Sbjct: 44741 ttgctcaggaataaatgtaca 44721
>emb|Z78205.1|BHT1UL Bovine herpesvirus type 1 UL22-35 genes Length = 37000 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 141 aggtcgacggcggcctactccatgt 165 |||||||||||||||| |||||||| Sbjct: 17529 aggtcgacggcggccttctccatgt 17553
>emb|AJ004801.1|BHV1CGEN Bovine herpesvirus type 1.1 complete genome Length = 135301 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 141 aggtcgacggcggcctactccatgt 165 |||||||||||||||| |||||||| Sbjct: 48329 aggtcgacggcggccttctccatgt 48353
>gb|AC117198.3| Mus musculus BAC clone RP23-127K18 from 9, complete sequence Length = 193044 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 tgtttaattaattaattttat 411 ||||||||||||||||||||| Sbjct: 156589 tgtttaattaattaattttat 156609
>emb|BX088568.4| Human DNA sequence from clone XX-751M15 on chromosome 13 Contains a DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 6 (RNA helicase, 54kDa) (DDX6) pseudogene, complete sequence Length = 34808 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 470 acatttctgagaaacagagcaaaag 494 |||||||||||| |||||||||||| Sbjct: 14079 acatttctgagagacagagcaaaag 14103
>emb|AL161421.11| Human DNA sequence from clone RP11-156K23 on chromosome 13 Contains the 5' end of a novel gene (containd FLJ31509 and KIAA0970), a RAD17 homolog (S. pombe) pseudogene and a CpG island, complete sequence Length = 151445 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 393 tttaattaattaattttatct 413 ||||||||||||||||||||| Sbjct: 49840 tttaattaattaattttatct 49820
>gb|AC074045.23| Homo sapiens Xp BAC RP11-60N3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 162381 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 393 tttaattaattaattttatct 413 ||||||||||||||||||||| Sbjct: 147700 tttaattaattaattttatct 147680
>gb|AC087723.3| Oryza sativa chromosome 10 clone OSJNBa0036D19, complete sequence Length = 144359 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 tgtttaattaattaattttat 411 ||||||||||||||||||||| Sbjct: 77435 tgtttaattaattaattttat 77455
>gb|AC158630.5| Mus musculus 10 BAC RP23-440F7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 191380 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 478 gagaaacagagcaaaagggaa 498 ||||||||||||||||||||| Sbjct: 125779 gagaaacagagcaaaagggaa 125759
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 39 ggcaacgacgactgcagcgacggcg 63 |||||||||||||| |||||||||| Sbjct: 11615976 ggcaacgacgactggagcgacggcg 11615952
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 tgtttaattaattaattttat 411 ||||||||||||||||||||| Sbjct: 3644594 tgtttaattaattaattttat 3644614 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 aattaattaattttatctgt 415 |||||||||||||||||||| Sbjct: 4292578 aattaattaattttatctgt 4292559
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 387 tctctgtttaattaattaatt 407 ||||||||||||||||||||| Sbjct: 17664533 tctctgtttaattaattaatt 17664553
>gb|AC158158.6| Mus musculus chromosome 1, clone RP23-10D8, complete sequence Length = 193479 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 tgtttaattaattaattttat 411 ||||||||||||||||||||| Sbjct: 173985 tgtttaattaattaattttat 174005
>gb|AC079256.5| Homo sapiens BAC clone RP11-325I24 from 2, complete sequence Length = 156069 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 387 tctctgtttaattaattaatt 407 ||||||||||||||||||||| Sbjct: 3142 tctctgtttaattaattaatt 3122
>gb|AC125472.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0050H14, complete sequence Length = 142245 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 394 ttaattaattaattttatctg 414 ||||||||||||||||||||| Sbjct: 56607 ttaattaattaattttatctg 56587
>gb|AC110266.15| Mus musculus chromosome 1, clone RP23-319C1, complete sequence Length = 177482 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 tgtttaattaattaattttat 411 ||||||||||||||||||||| Sbjct: 81343 tgtttaattaattaattttat 81363
>emb|BX640578.3| Mouse DNA sequence from clone RP23-261L3 on chromosome 2, complete sequence Length = 152285 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 tgtttaattaattaattttat 411 ||||||||||||||||||||| Sbjct: 95772 tgtttaattaattaattttat 95792
>emb|X94677.1|BHV1ULGNS Bovine herpesvirus type 1 genes for UL[27,28,29,30,31] Length = 10500 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 141 aggtcgacggcggcctactccatgt 165 |||||||||||||||| |||||||| Sbjct: 3253 aggtcgacggcggccttctccatgt 3277
>dbj|AP004397.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0436B06 Length = 148947 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 387 tctctgtttaattaattaatt 407 ||||||||||||||||||||| Sbjct: 141183 tctctgtttaattaattaatt 141203
>dbj|AP003962.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1705_C03 Length = 118339 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 387 tctctgtttaattaattaatt 407 ||||||||||||||||||||| Sbjct: 49922 tctctgtttaattaattaatt 49942
>emb|AL772241.27| Zebrafish DNA sequence from clone CH211-194M7 in linkage group 25, complete sequence Length = 154972 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 ttaattaattaattttatctg 414 ||||||||||||||||||||| Sbjct: 120204 ttaattaattaattttatctg 120224
>gb|AC102657.13| Mus musculus chromosome 10, clone RP23-15N10, complete sequence Length = 186954 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 478 gagaaacagagcaaaagggaa 498 ||||||||||||||||||||| Sbjct: 141129 gagaaacagagcaaaagggaa 141149
>emb|CR376859.9| Zebrafish DNA sequence from clone CH211-197D4 in linkage group 10, complete sequence Length = 58467 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 tgtttaattaattaattttat 411 ||||||||||||||||||||| Sbjct: 44822 tgtttaattaattaattttat 44842
>emb|BX511097.21| Zebrafish DNA sequence from clone DKEYP-93C5 in linkage group 2, complete sequence Length = 134883 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 tgtttaattaattaattttat 411 ||||||||||||||||||||| Sbjct: 12989 tgtttaattaattaattttat 13009
>emb|CR556713.11| Zebrafish DNA sequence from clone DKEY-28O14 in linkage group 11, complete sequence Length = 229692 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 394 ttaattaattaattttatctg 414 ||||||||||||||||||||| Sbjct: 103929 ttaattaattaattttatctg 103909
>gb|AY395058.1| Schistosoma mansoni ecdysone-induced protein E78 (E78) mRNA, complete cds Length = 1864 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 gggagcggcagtggcaacgac 47 ||||||||||||||||||||| Sbjct: 1365 gggagcggcagtggcaacgac 1385
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 tgtttaattaattaattttat 411 ||||||||||||||||||||| Sbjct: 3644515 tgtttaattaattaattttat 3644535 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 aattaattaattttatctgt 415 |||||||||||||||||||| Sbjct: 4293399 aattaattaattttatctgt 4293380
>emb|AL663008.3|OSJN00209 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0058J09, complete sequence Length = 164911 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 39 ggcaacgacgactgcagcgacggcg 63 |||||||||||||| |||||||||| Sbjct: 98986 ggcaacgacgactggagcgacggcg 98962
>emb|CT025655.16| Mouse DNA sequence from clone RP23-429H3 on chromosome 9, complete sequence Length = 122239 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 452 ttgctcaggaataaatgtaca 472 ||||||||||||||||||||| Sbjct: 56398 ttgctcaggaataaatgtaca 56378
>emb|CT025660.9| Mouse DNA sequence from clone RP24-79I19 on chromosome 9, complete sequence Length = 219226 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 391 tgtttaattaattaattttat 411 ||||||||||||||||||||| Sbjct: 109075 tgtttaattaattaattttat 109055
>emb|CT010439.6| Mouse DNA sequence from clone RP23-26E8 on chromosome 13, complete sequence Length = 231247 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 466 atgtacatttctgagaaacag 486 ||||||||||||||||||||| Sbjct: 21203 atgtacatttctgagaaacag 21223
>gb|AC165281.2| Mus musculus BAC clone RP24-502H6 from chromosome 13, complete sequence Length = 225816 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 398 ttaattaattttatctgttta 418 ||||||||||||||||||||| Sbjct: 8153 ttaattaattttatctgttta 8173
>gb|AY067636.1| Schmidtea mediterranea clone H.27.10c unknown mRNA sequence Length = 561 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 393 tttaattaattaattttatctgttt 417 |||||||||||| |||||||||||| Sbjct: 14 tttaattaattacttttatctgttt 38
>gb|AC114554.8| Mus musculus chromosome 5, clone RP23-414E14, complete sequence Length = 204467 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 477 tgagaaacagagcaaaagggaaga 500 ||||||||||| |||||||||||| Sbjct: 146286 tgagaaacagaacaaaagggaaga 146263
>ref|XM_469110.1| Oryza sativa (japonica cultivar-group), mRNA Length = 357 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 43 acgacgactgcagcgacggcgacg 66 |||||||||| ||||||||||||| Sbjct: 284 acgacgactggagcgacggcgacg 307
>ref|NM_183749.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 648 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 39 ggcaacgacgactgcagcgacggcgacg 66 |||||||||||| | ||||||||||||| Sbjct: 525 ggcaacgacgaccggagcgacggcgacg 552
>gb|AC159423.1| Trypanosoma brucei chromosome 8 clone RPCI93-26E13, complete sequence Length = 147087 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 aacgacgcgaagaggaacgt 97 |||||||||||||||||||| Sbjct: 125395 aacgacgcgaagaggaacgt 125414
>gb|AC112209.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0030I09 map C83B, complete sequence Length = 123477 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 177 gggaggacgctcaaagggcgggacctcc 204 |||||||||||||| ||||| ||||||| Sbjct: 99265 gggaggacgctcaaggggcgcgacctcc 99238
>gb|AC159405.1| Trypanosoma brucei chromosome 8 clone RPCI93-11J15, complete sequence Length = 164873 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 aacgacgcgaagaggaacgt 97 |||||||||||||||||||| Sbjct: 128046 aacgacgcgaagaggaacgt 128027
>gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence Length = 2481190 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 aacgacgcgaagaggaacgt 97 |||||||||||||||||||| Sbjct: 1743144 aacgacgcgaagaggaacgt 1743163
>gb|AC120237.5| Rattus norvegicus 1 BAC CH230-453N3 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 150760 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 ttaattaattaattttatct 413 |||||||||||||||||||| Sbjct: 68275 ttaattaattaattttatct 68256
>gb|AC116706.12| Mus musculus chromosome 1, clone RP23-37D15, complete sequence Length = 167357 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 484 cagagcaaaagggaagaggg 503 |||||||||||||||||||| Sbjct: 47433 cagagcaaaagggaagaggg 47414
>ref|XM_365538.1| Magnaporthe grisea 70-15 hypothetical protein (MG02240.4) partial mRNA Length = 3444 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 atgtaccaacgacgcgaaga 90 |||||||||||||||||||| Sbjct: 970 atgtaccaacgacgcgaaga 989
>ref|XM_429537.1| PREDICTED: Gallus gallus LOC417951 (LOC417951), mRNA Length = 952 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 464 aaatgtacatttctgagaaa 483 |||||||||||||||||||| Sbjct: 636 aaatgtacatttctgagaaa 655
>gb|DP000012.1| Macropus eugenii target 1 genomic scaffold Length = 1996640 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 gcagaggtgaagaaagacaa 372 |||||||||||||||||||| Sbjct: 463339 gcagaggtgaagaaagacaa 463320
>gb|AC134879.3| Homo sapiens BAC clone RP11-295P22 from Y, complete sequence Length = 205515 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 gagaaacagagcaaaaggga 497 |||||||||||||||||||| Sbjct: 107664 gagaaacagagcaaaaggga 107645
>ref|XM_849855.1| PREDICTED: Canis familiaris similar to solute carrier family 39 (zinc transporter), member 3 isoform a (LOC612127), mRNA Length = 1129 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 cgaagaggaacgtgccgccc 104 |||||||||||||||||||| Sbjct: 1010 cgaagaggaacgtgccgccc 991
>ref|XM_818417.1| Trypanosoma brucei TREU927 clone RPCI93-11J15 hypothetical protein (Tb927.8.5940) partial mRNA Length = 1419 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 aacgacgcgaagaggaacgt 97 |||||||||||||||||||| Sbjct: 716 aacgacgcgaagaggaacgt 735
>emb|CR628387.12| Zebrafish DNA sequence from clone DKEY-59J17 in linkage group 17, complete sequence Length = 220664 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 ctctgtttaattaattaatt 407 |||||||||||||||||||| Sbjct: 210802 ctctgtttaattaattaatt 210783
>gb|AC124372.4| Mus musculus BAC clone RP24-556P17 from chromosome 16, complete sequence Length = 197211 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 ctctctgtttaattaattaa 405 |||||||||||||||||||| Sbjct: 82845 ctctctgtttaattaattaa 82826
>gb|AY302566.1| Danio rerio chorion proteic component (zpc) gene, promoter region and 5' UTR Length = 6206 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 460 gaataaatgtacatttctgagaaacaga 487 |||||||||||||||| | ||||||||| Sbjct: 3778 gaataaatgtacatttatcagaaacaga 3805
>gb|AC122405.4| Mus musculus BAC clone RP24-119O6 from chromosome 12, complete sequence Length = 196285 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 389 tctgtttaattaattaattttatctgtt 416 |||||||| ||||||||||| ||||||| Sbjct: 168085 tctgtttatttaattaatttcatctgtt 168058
>ref|XM_757958.1| Theileria parva strain Muguga chromosome 3 hypothetical protein (TP03_0032) partial mRNA Length = 998 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 393 tttaattaattaattttatctgtt 416 ||||||||||||||||||| |||| Sbjct: 66 tttaattaattaattttatttgtt 89
>gb|AC023141.6| Homo sapiens BAC clone RP11-548K12 from 7, complete sequence Length = 197637 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 gagaaacagagcaaaaggga 497 |||||||||||||||||||| Sbjct: 170735 gagaaacagagcaaaaggga 170754
>gb|AC122172.30| Medicago truncatula clone mth2-27e7, complete sequence Length = 109532 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 398 ttaattaattttatctgtttaatcaaaattaa 429 |||||||||||||| | |||||| |||||||| Sbjct: 80217 ttaattaattttatttctttaattaaaattaa 80186
>gb|AY333070.1| Drosophila virilis antennapedia (Antp), CG10013 (CG10013), CG31217 (CG31217), and ultrabithorax (Ubx) genes, complete cds Length = 308092 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 tctgtttaattaattaattt 408 |||||||||||||||||||| Sbjct: 272395 tctgtttaattaattaattt 272376
>emb|AL162417.23| Human DNA sequence from clone RP11-326L24 on chromosome 9q34.13-34.3 Contains the GTF3C5 gene for general transcription factor IIIC polypeptide 5 63kDa, the CEL gene for carboxyl ester lipase (bile salt-stimulated lipase), the CELP gene for carboxyl ester lipase pseudogene, the RALGDS gene for ral guanine nucleotide dissociation stimulator, the gene for Forssman glycolipid synthetase (FS), three novel genes and six CpG islands, complete sequence Length = 152863 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggtgaagaaagacaagaga 376 |||||||||||||||||||| Sbjct: 144033 aggtgaagaaagacaagaga 144052
>emb|AL136971.7| Human DNA sequence from clone RP3-322A2 on chromosome 6 Contains part of the ANKRD6 gene for ankyrin repeat domain 6 (KIAA0957), complete sequence Length = 82601 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 ttaattaattaattttatct 413 |||||||||||||||||||| Sbjct: 60943 ttaattaattaattttatct 60924
>emb|AL137843.4| Human DNA sequence from clone RP3-377O6 on chromosome Xq22.2-23 Contains a thyroid autoantigen 70kDa (Ku antigen) (G22P1) pseudogene, complete sequence Length = 133402 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 387 tctctgtttaattaattaatttta 410 |||||||||||| ||||||||||| Sbjct: 74415 tctctgtttaataaattaatttta 74392
>gb|AC157986.4| Mus musculus chromosome 19, clone RP23-160F18, complete sequence Length = 207504 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 395 taattaattaattttatctgttta 418 |||| ||||||||||||||||||| Sbjct: 119396 taataaattaattttatctgttta 119419
>emb|AL034582.11|HS594I10 Human DNA sequence from clone RP4-594I10 on chromosome 1p33-35.3 Contains the DSCR1L2 gene for Down syndrome critical region gene 1-like 2 and a CpG island, complete sequence Length = 46738 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 tctgtttaattaattaattt 408 |||||||||||||||||||| Sbjct: 34899 tctgtttaattaattaattt 34880
>emb|AL031601.4|HSY237C10 Human DNA sequence from clone XX-Y237C10 on chromosome 10 Contains a poly(A) binding protein, cytoplasmic 1 (PABPC1) pseudogene, an Ig kappa chain precursor V region pseudogene, a pseudogene similar to part of kinase suppressor of ras (KSR) and four CpG islands, complete sequence Length = 197700 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 gagaaacagagcaaaaggga 497 |||||||||||||||||||| Sbjct: 72276 gagaaacagagcaaaaggga 72257
>gb|DQ145941.1| Homo sapiens globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (GBGT1) gene, complete cds Length = 14627 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 aggtgaagaaagacaagaga 376 |||||||||||||||||||| Sbjct: 477 aggtgaagaaagacaagaga 458
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 43 acgacgactgcagcgacggcgacg 66 |||||||| ||||||||||||||| Sbjct: 150454 acgacgacggcagcgacggcgacg 150477
>gb|AC131375.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0015J03, complete sequence Length = 165933 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 aattaattaattttatctgt 415 |||||||||||||||||||| Sbjct: 60119 aattaattaattttatctgt 60100
>emb|BX547996.10| Zebrafish DNA sequence from clone CH211-212H16 in linkage group 1, complete sequence Length = 213398 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 gtttaattaattaattttat 411 |||||||||||||||||||| Sbjct: 20693 gtttaattaattaattttat 20712
>emb|CR450720.5| Zebrafish DNA sequence from clone DKEYP-51F11 in linkage group 2, complete sequence Length = 200950 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 ggtgagagcagaggtgaaga 365 |||||||||||||||||||| Sbjct: 51771 ggtgagagcagaggtgaaga 51790
>gb|AC158900.4| Mus musculus chromosome 5, clone RP23-168G15, complete sequence Length = 211621 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 477 tgagaaacagagcaaaagggaaga 500 ||||||||||| |||||||||||| Sbjct: 6418 tgagaaacagaacaaaagggaaga 6395
>emb|BX323836.9| Zebrafish DNA sequence from clone CH211-249D6 in linkage group 13, complete sequence Length = 74669 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 tttatctgtttaatcaaaat 426 |||||||||||||||||||| Sbjct: 34951 tttatctgtttaatcaaaat 34970
>gb|AC113436.28| Pan troglodytes clone rp43-97f19, complete sequence Length = 166631 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 gagaaacagagcaaaaggga 497 |||||||||||||||||||| Sbjct: 148598 gagaaacagagcaaaaggga 148617
>gb|AC068522.7| Homo sapiens chromosome 8, clone RP11-23K11, complete sequence Length = 146952 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 393 tttaattaattaattttatctgtt 416 ||||||||||||||||||| |||| Sbjct: 9150 tttaattaattaattttatttgtt 9173
>gb|AC124906.3| Equus caballus clone CH241-268I16, complete sequence Length = 202908 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 404 aattttatctgtttaatcaaaatt 427 ||||||||||||||||| |||||| Sbjct: 163189 aattttatctgtttaattaaaatt 163212
>gb|AC009927.10| Homo sapiens chromosome 8, clone RP11-114M5, complete sequence Length = 166985 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 393 tttaattaattaattttatctgtt 416 ||||||||||||||||||| |||| Sbjct: 109850 tttaattaattaattttatttgtt 109873
>gb|AC007212.7| Arabidopsis thaliana chromosome 2 clone F8D23 map PhyB, complete sequence Length = 57550 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 attaattaattttatctgtt 416 |||||||||||||||||||| Sbjct: 34728 attaattaattttatctgtt 34747
>gb|AC013286.9| Homo sapiens chromosome 10 clone RP11-369F10, complete sequence Length = 178357 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 tgtttaattaattaatttta 410 |||||||||||||||||||| Sbjct: 4575 tgtttaattaattaatttta 4556
>gb|AC093255.2| Homo sapiens chromosome 5 clone RP11-181G6, complete sequence Length = 95597 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 ttaattaattaattttatct 413 |||||||||||||||||||| Sbjct: 15197 ttaattaattaattttatct 15216
>gb|AC091931.2| Homo sapiens chromosome 5 clone RP11-313L6, complete sequence Length = 185844 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 ttaattaattaattttatct 413 |||||||||||||||||||| Sbjct: 29786 ttaattaattaattttatct 29767
>emb|CR523579.1| Gallus gallus finished cDNA, clone ChEST869f21 Length = 1283 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 464 aaatgtacatttctgagaaa 483 |||||||||||||||||||| Sbjct: 543 aaatgtacatttctgagaaa 562
>gb|AC154779.3| Mus musculus BAC clone RP24-461H19 from chromosome 17, complete sequence Length = 188929 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 391 tgtttaattaattaattttatctgttta 418 |||||||||| | ||||||||||||||| Sbjct: 157794 tgtttaattactgaattttatctgttta 157767
>emb|BX664745.13| Zebrafish DNA sequence from clone DKEY-242A8 in linkage group 23, complete sequence Length = 261934 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 ctgtttaattaattaatttt 409 |||||||||||||||||||| Sbjct: 151458 ctgtttaattaattaatttt 151477
>gb|AC154359.2| Mus musculus BAC clone RP23-178L8 from chromosome 16, complete sequence Length = 212696 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 ctctctgtttaattaattaa 405 |||||||||||||||||||| Sbjct: 132696 ctctctgtttaattaattaa 132715
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 actgcagcgacggcgacgtc 68 |||||||||||||||||||| Sbjct: 24675425 actgcagcgacggcgacgtc 24675444 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 43 acgacgactgcagcgacggcgacg 66 |||||||||| ||||||||||||| Sbjct: 6403092 acgacgactggagcgacggcgacg 6403069
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 177 gggaggacgctcaaagggcgggacctcc 204 |||||||||||||| ||||| ||||||| Sbjct: 2523139 gggaggacgctcaaggggcgcgacctcc 2523166
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 43 acgacgactgcagcgacggcgacg 66 |||||||||| ||||||||||||| Sbjct: 15954079 acgacgactggagcgacggcgacg 15954056
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 39 ggcaacgacgactgcagcgacggcgacg 66 |||||||||||| | ||||||||||||| Sbjct: 13144781 ggcaacgacgaccggagcgacggcgacg 13144754 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 39 ggcaacgacgactgcagcgacggcgacg 66 |||||||||||| | ||||||||||||| Sbjct: 12034363 ggcaacgacgaccggagcgacggcgacg 12034390
>gb|AF321227.1|AF321227 Tribolium castaneum Ftz (ftz), Scr (scr), Dfd (dfd), Zen (zen), and Zen2 (zen2) genes, complete cds; and Pb (pb) gene, partial cds Length = 133406 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 398 ttaattaattttatctgtttaatcaaaattaa 429 |||||||||||||| ||||||| |||||||| Sbjct: 85750 ttaattaattttataggtttaataaaaattaa 85719
>gb|AC108034.2| Homo sapiens BAC clone RP11-137J16 from 4, complete sequence Length = 164396 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 393 tttaattaattaattttatctgtt 416 ||||||||| |||||||||||||| Sbjct: 88600 tttaattaagtaattttatctgtt 88623
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 gccgccccacgtcctggccg 117 |||||||||||||||||||| Sbjct: 8457494 gccgccccacgtcctggccg 8457475
>gb|AC093787.3| Homo sapiens BAC clone RP11-215P9 from 2, complete sequence Length = 86945 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 gagaaacagagcaaaaggga 497 |||||||||||||||||||| Sbjct: 50574 gagaaacagagcaaaaggga 50593
>gb|AC138789.1| Homo sapiens BAC clone CTD-2593N8 from 7, complete sequence Length = 155989 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 gagaaacagagcaaaaggga 497 |||||||||||||||||||| Sbjct: 34334 gagaaacagagcaaaaggga 34353
>gb|AC135600.3| Oryza sativa chromosome 3 BAC OSJNBb0047K21 genomic sequence, complete sequence Length = 117046 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 43 acgacgactgcagcgacggcgacg 66 |||||||||| ||||||||||||| Sbjct: 25525 acgacgactggagcgacggcgacg 25548
>gb|AC027689.10|AC027689 Homo sapiens chromosome 18 clone RP11-245A17, complete sequence Length = 180573 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 ctgtttaattaattaatttt 409 |||||||||||||||||||| Sbjct: 163605 ctgtttaattaattaatttt 163624
>gb|AC145250.3| Macropus eugenii clone ME_KBa-232I1, complete sequence Length = 126347 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 gcagaggtgaagaaagacaa 372 |||||||||||||||||||| Sbjct: 13296 gcagaggtgaagaaagacaa 13277
>dbj|AP003208.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1158F07 Length = 139491 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 39 ggcaacgacgactgcagcgacggcgacg 66 |||||||||||| | ||||||||||||| Sbjct: 120502 ggcaacgacgaccggagcgacggcgacg 120475
>dbj|AP003793.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0487E11 Length = 151303 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 39 ggcaacgacgactgcagcgacggcgacg 66 |||||||||||| | ||||||||||||| Sbjct: 17082 ggcaacgacgaccggagcgacggcgacg 17055
>dbj|AP003414.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1153F04 Length = 158174 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 39 ggcaacgacgactgcagcgacggcgacg 66 |||||||||||| | ||||||||||||| Sbjct: 1303 ggcaacgacgaccggagcgacggcgacg 1330
>dbj|AP004735.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0031P18 Length = 156535 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 43 acgacgactgcagcgacggcgacg 66 |||||||||| ||||||||||||| Sbjct: 87528 acgacgactggagcgacggcgacg 87505
>dbj|AP003921.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0028G04 Length = 159761 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 39 ggcaacgacgactgcagcgacggcgacg 66 |||||||||||| | ||||||||||||| Sbjct: 80027 ggcaacgacgaccggagcgacggcgacg 80054
>dbj|AP004734.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0026P23 Length = 180188 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 43 acgacgactgcagcgacggcgacg 66 |||||||||| ||||||||||||| Sbjct: 167082 acgacgactggagcgacggcgacg 167059
>gb|AC102722.7| Mus musculus chromosome 19, clone RP24-108O16, complete sequence Length = 141681 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 395 taattaattaattttatctgttta 418 |||| ||||||||||||||||||| Sbjct: 20825 taataaattaattttatctgttta 20802
>emb|AL929061.31| Mouse DNA sequence from clone RP23-402A18 on chromosome X, complete sequence Length = 146071 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 475 tctgagaaacagagcaaaag 494 |||||||||||||||||||| Sbjct: 55163 tctgagaaacagagcaaaag 55182
>emb|AL929023.3| Zebrafish DNA sequence from clone DKEY-98G12 in linkage group 17, complete sequence Length = 198736 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 ctctgtttaattaattaatt 407 |||||||||||||||||||| Sbjct: 142731 ctctgtttaattaattaatt 142712
>gb|AC005040.2|AC005040 Homo sapiens BAC clone RP11-519H15 from 2, complete sequence Length = 189949 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 ttaattaattaattttatct 413 |||||||||||||||||||| Sbjct: 56150 ttaattaattaattttatct 56169
>dbj|AK072969.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023144D16, full insert sequence Length = 964 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 177 gggaggacgctcaaagggcgggacctcc 204 |||||||||||||| ||||| ||||||| Sbjct: 552 gggaggacgctcaaggggcgcgacctcc 579
>gb|AC154388.4| Mus musculus BAC clone RP23-14P7 from chromosome 14, complete sequence Length = 246800 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 394 ttaattaattaattttatctgttt 417 |||||||||||||||| ||||||| Sbjct: 57052 ttaattaattaattttctctgttt 57029
>emb|AL929172.6| Zebrafish DNA sequence from clone DKEYP-46C10 in linkage group 25, complete sequence Length = 182666 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 ttaattaattaattttatct 413 |||||||||||||||||||| Sbjct: 72565 ttaattaattaattttatct 72546
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 177 gggaggacgctcaaagggcgggacctcc 204 |||||||||||||| ||||| ||||||| Sbjct: 2532170 gggaggacgctcaaggggcgcgacctcc 2532197
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 actgcagcgacggcgacgtc 68 |||||||||||||||||||| Sbjct: 24603631 actgcagcgacggcgacgtc 24603650 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 43 acgacgactgcagcgacggcgacg 66 |||||||||| ||||||||||||| Sbjct: 6402967 acgacgactggagcgacggcgacg 6402944
>emb|AL732649.3|CNS08C9O Oryza sativa chromosome 12, . BAC OSJNBb0067N05 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 109555 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 43 acgacgactgcagcgacggcgacg 66 |||||||||| ||||||||||||| Sbjct: 64640 acgacgactggagcgacggcgacg 64617
>emb|AL954852.5|CNS08CD6 Oryza sativa chromosome 12, . BAC OJ1573_A06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 143895 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 actgcagcgacggcgacgtc 68 |||||||||||||||||||| Sbjct: 120291 actgcagcgacggcgacgtc 120310
>gb|AC133499.3| Mus musculus BAC clone RP24-248F14 from 8, complete sequence Length = 181064 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 393 tttaattaattaattttatctgtt 416 |||||||||||||||| ||||||| Sbjct: 113254 tttaattaattaatttaatctgtt 113231
>gb|AC002319.1|AC002319 Homo sapiens chromosome 9q34, clone 70C11, complete sequence Length = 46305 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 aggtgaagaaagacaagaga 376 |||||||||||||||||||| Sbjct: 19955 aggtgaagaaagacaagaga 19936
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 cgggagcggcagtggcaacgacga 49 ||||||||||||||||| |||||| Sbjct: 2945470 cgggagcggcagtggcagcgacga 2945493
>dbj|AP007297.1| Lotus japonicus genomic DNA, clone:LjT02G13, TM0489a, complete sequence Length = 72531 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 tgtttaattaattaatttta 410 |||||||||||||||||||| Sbjct: 8925 tgtttaattaattaatttta 8906
>gb|DP000020.1| Equus caballus target 1 genomic scaffold Length = 1907055 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 404 aattttatctgtttaatcaaaatt 427 ||||||||||||||||| |||||| Sbjct: 1553646 aattttatctgtttaattaaaatt 1553669
>emb|AJ233625.1|OCU233625 Oryctolagus cuniculus endogenous retroviral sequence ERV-L pol gene, clone ERV-L Rabbit1 Length = 303 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 303 atggatgtgtgtgaaagcttgtgg 326 ||||||| |||||||||||||||| Sbjct: 294 atggatgagtgtgaaagcttgtgg 271
>gb|L23501.1|HUMKPRWI Homo sapiens Prader-Willi chromosome DNA fragment Length = 2965 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 108 gtcctggccgagcgacggcggagg 131 |||||||| ||||||||||||||| Sbjct: 2598 gtcctggctgagcgacggcggagg 2621
>emb|AL358774.9| Mouse DNA sequence from clone RP21-463A3 on chromosome X, complete sequence Length = 36971 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 475 tctgagaaacagagcaaaag 494 |||||||||||||||||||| Sbjct: 30262 tctgagaaacagagcaaaag 30281
>dbj|AP005120.2| Homo sapiens genomic DNA, chromosome 18p clone:RP11-513M1, complete sequences Length = 125561 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 ctgtttaattaattaatttt 409 |||||||||||||||||||| Sbjct: 31588 ctgtttaattaattaatttt 31569 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,811,265 Number of Sequences: 3902068 Number of extensions: 4811265 Number of successful extensions: 180583 Number of sequences better than 10.0: 141 Number of HSP's better than 10.0 without gapping: 145 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 178346 Number of HSP's gapped (non-prelim): 2237 length of query: 514 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 491 effective length of database: 17,143,297,704 effective search space: 8417359172664 effective search space used: 8417359172664 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
