| Clone Name | basd25p09 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X68654.1|HVCW21 H.vulgare Cw-21 mRNA Length = 705 Score = 248 bits (125), Expect = 4e-63 Identities = 131/134 (97%) Strand = Plus / Plus Query: 1 tagccgccgacgcggccatctcctgcggtcaggtgagctctgccttgagccnntgcatct 60 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 121 tagccgccgacgcggccatctcctgcggtcaggtgagctctgccttgagcccctgcatct 180 Query: 61 cctatgcccgcggcaacggcgccaaaccgcctgcggcctgctgcagcggcgncaagagac 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 181 cctatgcccgcggcaacggcgccaaaccgcctgcggcctgctgcagcggcgtcaagagac 240 Query: 121 tggccggcgctgcc 134 |||||||||||||| Sbjct: 241 tggccggcgctgcc 254
>emb|Z66528.1|HVGLTP4X3 H.vulgare ltp4.3 gene Length = 1862 Score = 224 bits (113), Expect = 5e-56 Identities = 125/130 (96%) Strand = Plus / Plus Query: 1 tagccgccgacgcggccatctcctgcggtcaggtgagctctgccttgagccnntgcatct 60 ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1091 tagccaccgacgcggccatctcctgcggtcaggtgagctctgccttgagcccttgcatct 1150 Query: 61 cctatgcccgcggcaacggcgccaaaccgcctgcggcctgctgcagcggcgncaagagac 120 ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 1151 cctatgcccgcggcaacggcgccaaaccgcctgtggcctgctgcagcggcgtcaagagac 1210 Query: 121 tggccggcgc 130 |||||||||| Sbjct: 1211 tggccggcgc 1220
>emb|X68656.1|HVCW19 H.vulgare Cw-19 mRNA Length = 660 Score = 224 bits (113), Expect = 5e-56 Identities = 125/130 (96%) Strand = Plus / Plus Query: 1 tagccgccgacgcggccatctcctgcggtcaggtgagctctgccttgagccnntgcatct 60 ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 107 tagccaccgacgcggccatctcctgcggtcaggtgagctctgccttgagcccttgcatct 166 Query: 61 cctatgcccgcggcaacggcgccaaaccgcctgcggcctgctgcagcggcgncaagagac 120 ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 167 cctatgcccgcggcaacggcgccaaaccgcctgtggcctgctgcagcggcgtcaagagac 226 Query: 121 tggccggcgc 130 |||||||||| Sbjct: 227 tggccggcgc 236
>emb|Z66529.1|HVGLTP4X9 H.vulgare Ltp4.2 gene Length = 1567 Score = 212 bits (107), Expect = 2e-52 Identities = 119/124 (95%) Strand = Plus / Plus Query: 7 ccgacgcggccatctcctgcggtcaggtgagctctgccttgagccnntgcatctcctatg 66 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 732 ccgacgcggccatctcctgcggtcaggtgagctctgccttgagcccctgcatctcctatg 791 Query: 67 cccgcggcaacggcgccaaaccgcctgcggcctgctgcagcggcgncaagagactggccg 126 ||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||| Sbjct: 792 cccgcggcaacggcgccaaaccgcctgtggcctgctgcagcggtgtcaagagactggccg 851 Query: 127 gcgc 130 |||| Sbjct: 852 gcgc 855
>gb|U63993.1|HVU63993 Hordeum vulgare lipid transfer protein (blt4.9) gene, complete cds Length = 3238 Score = 212 bits (107), Expect = 2e-52 Identities = 119/124 (95%) Strand = Plus / Plus Query: 7 ccgacgcggccatctcctgcggtcaggtgagctctgccttgagccnntgcatctcctatg 66 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 2128 ccgacgcggccatctcctgcggtcaggtgagctctgccttgagcccctgcatctcctatg 2187 Query: 67 cccgcggcaacggcgccaaaccgcctgcggcctgctgcagcggcgncaagagactggccg 126 ||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||| Sbjct: 2188 cccgcggcaacggcgccaaaccgcctgtggcctgctgcagcggtgtcaagagactggccg 2247 Query: 127 gcgc 130 |||| Sbjct: 2248 gcgc 2251
>emb|Z37115.1|HVLTPPB H.vulgare (clone pKG285) mRNA for lipid transfer protein precursor Length = 691 Score = 161 bits (81), Expect = 6e-37 Identities = 117/130 (90%) Strand = Plus / Plus Query: 1 tagccgccgacgcggccatctcctgcggtcaggtgagctctgccttgagccnntgcatct 60 ||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||| | Sbjct: 76 tagccgccgacgcagccatctcctgcggtcaggtgagctctgccttgcgcccctgcattt 135 Query: 61 cctatgcccgcggcaacggcgccaaaccgcctgcggcctgctgcagcggcgncaagagac 120 |||||||| |||||||||||| || | |||| |||||||||||||||||| ||||||| Sbjct: 136 cctatgccagcggcaacggcggcatcctgcctccggcctgctgcagcggcgtcaagagat 195 Query: 121 tggccggcgc 130 |||||||||| Sbjct: 196 tggccggcgc 205
>gb|U18127.1|HVU18127 Hordeum vulgare phospholipid transfer protein precursor gene, complete cds Length = 573 Score = 161 bits (81), Expect = 6e-37 Identities = 117/130 (90%) Strand = Plus / Plus Query: 1 tagccgccgacgcggccatctcctgcggtcaggtgagctctgccttgagccnntgcatct 60 ||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||| | Sbjct: 147 tagccgccgacgcagccatctcctgcggtcaggtgagctctgccttgcgcccctgcattt 206 Query: 61 cctatgcccgcggcaacggcgccaaaccgcctgcggcctgctgcagcggcgncaagagac 120 |||||||| |||||||||||| || | |||| |||||||||||||||||| ||||||| Sbjct: 207 cctatgccagcggcaacggcggcatcctgcctccggcctgctgcagcggcgtcaagagat 266 Query: 121 tggccggcgc 130 |||||||||| Sbjct: 267 tggccggcgc 276
>gb|DQ465676.1| Triticum aestivum clone Lt10F9 non-specific lipid transfer protein 1 precursor, mRNA, complete cds Length = 348 Score = 139 bits (70), Expect = 2e-30 Identities = 83/88 (94%) Strand = Plus / Plus Query: 24 tgcggtcaggtgagctctgccttgagccnntgcatctcctatgcccgcggcaacggcgcc 83 |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 85 tgcggtcaggtgagctctgccttgagcccctgcatctcctatgcacgcggcaacggcgcc 144 Query: 84 aaaccgcctgcggcctgctgcagcggcg 111 || ||| ||||||||||||||||||||| Sbjct: 145 aacccgtctgcggcctgctgcagcggcg 172
>gb|DQ465678.1| Triticum aestivum clone Lt10E10 non-specific lipid transfer protein 1 precursor, mRNA, complete cds Length = 348 Score = 139 bits (70), Expect = 2e-30 Identities = 83/88 (94%) Strand = Plus / Plus Query: 24 tgcggtcaggtgagctctgccttgagccnntgcatctcctatgcccgcggcaacggcgcc 83 |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 85 tgcggtcaggtgagctctgccttgagcccctgcatctcctatgcacgcggcaacggcgcc 144 Query: 84 aaaccgcctgcggcctgctgcagcggcg 111 || ||| ||||||||||||||||||||| Sbjct: 145 aacccgtctgcggcctgctgcagcggcg 172
>emb|AJ784901.1| Triticum aestivum mRNA for type 1 non-specific lipid transfer protein precursor (ltp9.2 gene) Length = 708 Score = 131 bits (66), Expect = 6e-28 Identities = 82/88 (93%) Strand = Plus / Plus Query: 24 tgcggtcaggtgagctctgccttgagccnntgcatctcctatgcccgcggcaacggcgcc 83 |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 151 tgcggtcaggtgagctctgccttgagcccctgcatctcctatgcacgcggcaacggcgcc 210 Query: 84 aaaccgcctgcggcctgctgcagcggcg 111 | ||| ||||||||||||||||||||| Sbjct: 211 agcccgtctgcggcctgctgcagcggcg 238
>emb|AJ784903.1| Triticum turgidum subsp. durum partial mRNA for type 1 non-specific lipid transfer protein precursor (ltp9.2 gene) Length = 604 Score = 123 bits (62), Expect = 1e-25 Identities = 81/88 (92%) Strand = Plus / Plus Query: 24 tgcggtcaggtgagctctgccttgagccnntgcatctcctatgcccgcggcaacggcgcc 83 |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 50 tgcggtcaggtgagctctgccttgagcccctgcatctcctatgcacgcggcaacggcgcc 109 Query: 84 aaaccgcctgcggcctgctgcagcggcg 111 | || ||||||||||||||||||||| Sbjct: 110 agcccatctgcggcctgctgcagcggcg 137
>emb|AJ852556.1| Triticum aestivum ltp9.2d gene for type 1 non specific lipid transfer protein precursor Length = 2087 Score = 123 bits (62), Expect = 1e-25 Identities = 81/88 (92%) Strand = Plus / Plus Query: 24 tgcggtcaggtgagctctgccttgagccnntgcatctcctatgcccgcggcaacggcgcc 83 |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 1342 tgcggtcaggtgagctctgccttgagcccctgcatctcctatgcacgcggcaacggcgcc 1401 Query: 84 aaaccgcctgcggcctgctgcagcggcg 111 | || ||||||||||||||||||||| Sbjct: 1402 agcccatctgcggcctgctgcagcggcg 1429
>emb|AJ852555.1| Triticum aestivum ltp9.2c gene for type 1 non specific lipid transfer protein precursor Length = 2122 Score = 123 bits (62), Expect = 1e-25 Identities = 81/88 (92%) Strand = Plus / Plus Query: 24 tgcggtcaggtgagctctgccttgagccnntgcatctcctatgcccgcggcaacggcgcc 83 |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 1354 tgcggtcaggtgagctctgccttgagcccctgcatctcctatgcacgcggcaacggcgcc 1413 Query: 84 aaaccgcctgcggcctgctgcagcggcg 111 | || ||||||||||||||||||||| Sbjct: 1414 agcccatctgcggcctgctgcagcggcg 1441
>gb|AY789644.1| Triticum aestivum lipid transfer protein 4 (LTP4) mRNA, complete cds Length = 345 Score = 117 bits (59), Expect = 9e-24 Identities = 110/128 (85%) Strand = Plus / Plus Query: 1 tagccgccgacgcggccatctcctgcggtcaggtgagctctgccttgagccnntgcatct 60 ||||| |||||||||| ||||||||||| ||||||||||| ||| | ||| ||| | | Sbjct: 62 tagcctccgacgcggcaatctcctgcggccaggtgagctccgcccttggcccgtgccttt 121 Query: 61 cctatgcccgcggcaacggcgccaaaccgcctgcggcctgctgcagcggcgncaagagac 120 ||||||| |||||||||||||||| ||| ||||||||||||||||||||| || |||| Sbjct: 122 cctatgcacgcggcaacggcgccagcccgtctgcggcctgctgcagcggcgtcaggagat 181 Query: 121 tggccggc 128 |||||||| Sbjct: 182 tggccggc 189
>gb|DQ465679.1| Triticum aestivum clone Lt19C10 non-specific lipid transfer protein 1 precursor, mRNA, complete cds Length = 348 Score = 113 bits (57), Expect = 1e-22 Identities = 105/122 (86%) Strand = Plus / Plus Query: 9 gacgcggccatctcctgcggtcaggtgagctctgccttgagccnntgcatctcctatgcc 68 ||||| || |||||||| || |||||||||||||||||||||| |||||||||||||| Sbjct: 70 gacgctgcaatctcctgtggccaggtgagctctgccttgagcccctgcatctcctatgca 129 Query: 69 cgcggcaacggcgccaaaccgcctgcggcctgctgcagcggcgncaagagactggccggc 128 ||||||| |||| ||| || ||||||||||||||||| || | || ||| ||||||||| Sbjct: 130 cgcggcagcggctccagcccacctgcggcctgctgcagtggtgtcaggagtctggccggc 189 Query: 129 gc 130 || Sbjct: 190 gc 191
>emb|Z37114.1|HVLTPPA H.vulgare (clone pKG2316) mRNA for lipid transfer protein precursor Length = 627 Score = 77.8 bits (39), Expect = 7e-12 Identities = 45/47 (95%) Strand = Plus / Plus Query: 1 tagccgccgacgcggccatctcctgcggtcaggtgagctctgccttg 47 |||||||||||||||||||| ||||||| |||||||||||||||||| Sbjct: 64 tagccgccgacgcggccatcacctgcggccaggtgagctctgccttg 110
>emb|X68655.1|HVCW18 H.vulgare Cw-18 mRNA Length = 732 Score = 77.8 bits (39), Expect = 7e-12 Identities = 45/47 (95%) Strand = Plus / Plus Query: 1 tagccgccgacgcggccatctcctgcggtcaggtgagctctgccttg 47 |||||||||||||||||||| ||||||| |||||||||||||||||| Sbjct: 135 tagccgccgacgcggccatcacctgcggccaggtgagctctgccttg 181
>gb|AY754742.1| Triticum aestivum lipid transfer protein (LTP2) mRNA, complete cds Length = 348 Score = 67.9 bits (34), Expect = 7e-09 Identities = 103/127 (81%) Strand = Plus / Plus Query: 2 agccgccgacgcggccatctcctgcggtcaggtgagctctgccttgagccnntgcatctc 61 |||| |||||||||||||| |||||| ||||||||||||||||||| || ||| || | Sbjct: 63 agcctccgacgcggccatcagctgcggccaggtgagctctgccttgaccccctgcgtcgc 122 Query: 62 ctatgcccgcggcaacggcgccaaaccgcctgcggcctgctgcagcggcgncaagagact 121 |||||| |||| ||| ||| ||| ||| ||||||||||||||||| || || | | Sbjct: 123 ctatgcgaagggcagcgggaccagcccgtctggggcctgctgcagcggcgtcaggaaatt 182 Query: 122 ggccggc 128 ||||||| Sbjct: 183 ggccggc 189
>gb|AF334185.1|AF334185 Triticum aestivum lipid transfer protein precursor (LTP2) mRNA, complete cds Length = 730 Score = 67.9 bits (34), Expect = 7e-09 Identities = 103/127 (81%) Strand = Plus / Plus Query: 2 agccgccgacgcggccatctcctgcggtcaggtgagctctgccttgagccnntgcatctc 61 |||| |||||||||||||| |||||| ||||||||||||||||||| || ||| || | Sbjct: 142 agcctccgacgcggccatcagctgcggccaggtgagctctgccttgaccccctgcgtcgc 201 Query: 62 ctatgcccgcggcaacggcgccaaaccgcctgcggcctgctgcagcggcgncaagagact 121 |||||| |||| ||| ||| ||| ||| ||||||||||||||||| || || | | Sbjct: 202 ctatgcgaagggcagcgggaccagcccgtctggggcctgctgcagcggcgtcaggaaatt 261 Query: 122 ggccggc 128 ||||||| Sbjct: 262 ggccggc 268
>emb|AJ852557.1| Triticum aestivum ltp9.5b gene for type 1 non specific lipid transfer protein precursor Length = 496 Score = 67.9 bits (34), Expect = 7e-09 Identities = 103/127 (81%) Strand = Plus / Plus Query: 2 agccgccgacgcggccatctcctgcggtcaggtgagctctgccttgagccnntgcatctc 61 |||| |||||||||||||| |||||| ||||||||||||||||||| || ||| || | Sbjct: 83 agcctccgacgcggccatcagctgcggccaggtgagctctgccttgaccccctgcgtcgc 142 Query: 62 ctatgcccgcggcaacggcgccaaaccgcctgcggcctgctgcagcggcgncaagagact 121 |||||| |||| ||| ||| ||| ||| ||||||||||||||||| || || | | Sbjct: 143 ctatgcgaagggcagcgggaccagcccgtctggggcctgctgcagcggcgtcaggaaatt 202 Query: 122 ggccggc 128 ||||||| Sbjct: 203 ggccggc 209
>gb|AY796184.1| Triticum aestivum lipid transfer protein (LTP1) mRNA, complete cds Length = 348 Score = 63.9 bits (32), Expect = 1e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 tagccgccgacgcggccatctcctgcggtcaggtgagctctgcc 44 ||||| |||||||||| ||||||||||||||||||| ||||||| Sbjct: 62 tagcctccgacgcggcgatctcctgcggtcaggtgaactctgcc 105
>gb|AY566607.1| Triticum aestivum lipid transfer protein (LPT1) gene, complete cds Length = 3448 Score = 63.9 bits (32), Expect = 1e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 tagccgccgacgcggccatctcctgcggtcaggtgagctctgcc 44 ||||| |||||||||| ||||||||||||||||||| ||||||| Sbjct: 2918 tagcctccgacgcggcgatctcctgcggtcaggtgaactctgcc 2961
>gb|AF302788.1|AF302788 Triticum aestivum lipid transfer protein precursor (LTP1) mRNA, complete cds Length = 737 Score = 63.9 bits (32), Expect = 1e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 tagccgccgacgcggccatctcctgcggtcaggtgagctctgcc 44 ||||| |||||||||| ||||||||||||||||||| ||||||| Sbjct: 122 tagcctccgacgcggcgatctcctgcggtcaggtgaactctgcc 165
>gb|DQ465677.1| Triticum aestivum clone Lt10B6 non-specific lipid transfer protein 1 precursor, mRNA, complete cds Length = 348 Score = 56.0 bits (28), Expect = 3e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 1 tagccgccgacgcggccatctcctgcggtcaggtgagctctgcc 44 ||||| |||||||||| ||| ||||||||||||||| ||||||| Sbjct: 62 tagcctccgacgcggcgatcccctgcggtcaggtgaactctgcc 105
>emb|X56547.1|HSBLT4 H. vulgare BLT4 mRNA Length = 724 Score = 56.0 bits (28), Expect = 3e-05 Identities = 43/47 (91%), Gaps = 2/47 (4%) Strand = Plus / Plus Query: 1 tagccgccgacgcggccatctcctgcggtcaggtgagctctgccttg 47 |||||||||||||| |||| ||||||| |||||||||||||||||| Sbjct: 136 tagccgccgacgcg--catcacctgcggccaggtgagctctgccttg 180
>emb|X71669.1|SVTLP1R S.vulgare ltp1 mRNA Length = 717 Score = 50.1 bits (25), Expect = 0.002 Identities = 28/29 (96%) Strand = Plus / Plus Query: 12 gcggccatctcctgcggtcaggtgagctc 40 ||||||||||||||||| ||||||||||| Sbjct: 26 gcggccatctcctgcgggcaggtgagctc 54
>emb|X71667.1|SVLTP1 S.vulgare ltp1 gene Length = 1499 Score = 50.1 bits (25), Expect = 0.002 Identities = 28/29 (96%) Strand = Plus / Plus Query: 12 gcggccatctcctgcggtcaggtgagctc 40 ||||||||||||||||| ||||||||||| Sbjct: 726 gcggccatctcctgcgggcaggtgagctc 754
>gb|AC159631.2| Mus musculus BAC clone RP24-177F21 from chromosome 12, complete sequence Length = 171538 Score = 42.1 bits (21), Expect = 0.40 Identities = 24/25 (96%) Strand = Plus / Minus Query: 25 gcggtcaggtgagctctgccttgag 49 |||||||||||| |||||||||||| Sbjct: 24755 gcggtcaggtgatctctgccttgag 24731
>emb|AL590822.36| Human DNA sequence from clone RP11-181G12 on chromosome 1 Contains the 3' end of the PRKCZ gene for protein kinase C zeta, a novel gene, a novel gene (FLJ31031), the SKI gene for v-ski sarcoma viral oncogene homolog (avian) and five CpG islands, complete sequence Length = 179836 Score = 42.1 bits (21), Expect = 0.40 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 cctgcggtcaggtgagctctg 42 ||||||||||||||||||||| Sbjct: 113706 cctgcggtcaggtgagctctg 113726
>ref|XM_426206.1| PREDICTED: Gallus gallus similar to Protein KIAA0711 (LOC428648), mRNA Length = 1785 Score = 38.2 bits (19), Expect = 6.3 Identities = 30/34 (88%) Strand = Plus / Plus Query: 101 ctgcagcggcgncaagagactggccggcgctgcc 134 ||||||||||| | ||| ||||||||||||||| Sbjct: 709 ctgcagcggcgcctggaggctggccggcgctgcc 742
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cgccgacgcggccatctcc 23 ||||||||||||||||||| Sbjct: 2080365 cgccgacgcggccatctcc 2080347
>gb|BC003839.1| Mus musculus myeloid cell leukemia sequence 1, mRNA (cDNA clone MGC:6351 IMAGE:3491015), complete cds Length = 1276 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 6 gccgacgcggccatctcct 24 ||||||||||||||||||| Sbjct: 352 gccgacgcggccatctcct 334
>gb|BC021638.1| Mus musculus myeloid cell leukemia sequence 1, mRNA (cDNA clone MGC:13884 IMAGE:4190996), complete cds Length = 3464 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 6 gccgacgcggccatctcct 24 ||||||||||||||||||| Sbjct: 362 gccgacgcggccatctcct 344
>ref|NM_021846.2| Rattus norvegicus myeloid cell leukemia sequence 1 (Mcl1), mRNA Length = 2130 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 6 gccgacgcggccatctcct 24 ||||||||||||||||||| Sbjct: 355 gccgacgcggccatctcct 337
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 38.2 bits (19), Expect = 6.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 69 cgcggcaacggcgccaaaccgcc 91 |||||| |||||||||||||||| Sbjct: 4353639 cgcggctacggcgccaaaccgcc 4353617
>ref|NM_008562.2| Mus musculus myeloid cell leukemia sequence 1 (Mcl1), mRNA Length = 3464 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 6 gccgacgcggccatctcct 24 ||||||||||||||||||| Sbjct: 362 gccgacgcggccatctcct 344
>gb|AC144485.2| Gasterosteus aculeatus clone CH213-101E8, complete sequence Length = 203829 Score = 38.2 bits (19), Expect = 6.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 16 ccatctcctgcggtcaggtgagc 38 |||||||||||| |||||||||| Sbjct: 194095 ccatctcctgcgttcaggtgagc 194117
>gb|AY335485.1| Oryza sativa (japonica cultivar-group) lipid transfer protein LT1 mRNA, complete cds Length = 530 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 93 gcggcctgctgcagcggcg 111 ||||||||||||||||||| Sbjct: 236 gcggcctgctgcagcggcg 254
>gb|AY327042.1| Oryza sativa (japonica cultivar-group) lipid transfer protein LPT1 mRNA, complete cds Length = 647 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 93 gcggcctgctgcagcggcg 111 ||||||||||||||||||| Sbjct: 279 gcggcctgctgcagcggcg 297
>emb|Z23271.1|OSLPTPRA O.sativa lipid transfer protein gene, complete CDS Length = 1485 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 93 gcggcctgctgcagcggcg 111 ||||||||||||||||||| Sbjct: 511 gcggcctgctgcagcggcg 529
>emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete genome; segment 10/16 Length = 348642 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 93 gcggcctgctgcagcggcg 111 ||||||||||||||||||| Sbjct: 79273 gcggcctgctgcagcggcg 79291
>emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete genome; segment 5/16 Length = 348624 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 3 gccgccgacgcggccatct 21 ||||||||||||||||||| Sbjct: 268023 gccgccgacgcggccatct 268041
>emb|BX640432.1| Bordetella parapertussis strain 12822, complete genome; segment 10/14 Length = 346301 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 93 gcggcctgctgcagcggcg 111 ||||||||||||||||||| Sbjct: 152292 gcggcctgctgcagcggcg 152310
>emb|BX640429.1| Bordetella parapertussis strain 12822, complete genome; segment 7/14 Length = 344321 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 3 gccgccgacgcggccatct 21 ||||||||||||||||||| Sbjct: 213685 gccgccgacgcggccatct 213703
>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12 Length = 349354 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 93 gcggcctgctgcagcggcg 111 ||||||||||||||||||| Sbjct: 82829 gcggcctgctgcagcggcg 82811
>gb|AC144487.1| Gasterosteus aculeatus clone CH213-160O9, complete sequence Length = 181162 Score = 38.2 bits (19), Expect = 6.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 16 ccatctcctgcggtcaggtgagc 38 |||||||||||| |||||||||| Sbjct: 145336 ccatctcctgcgttcaggtgagc 145314
>gb|BC005427.1| Mus musculus myeloid cell leukemia sequence 1, mRNA (cDNA clone MGC:5839 IMAGE:3493739), complete cds Length = 2192 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 6 gccgacgcggccatctcct 24 ||||||||||||||||||| Sbjct: 345 gccgacgcggccatctcct 327
>gb|CP000136.1| Rhizobium etli CFN 42 plasmid p42c, complete sequence Length = 250948 Score = 38.2 bits (19), Expect = 6.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 58 tctcctatgcccgcggcaacggc 80 ||||||||||||||| ||||||| Sbjct: 155380 tctcctatgcccgcgccaacggc 155358
>dbj|AK159504.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420022E01 product:myeloid cell leukemia sequence 1, full insert sequence Length = 3397 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 6 gccgacgcggccatctcct 24 ||||||||||||||||||| Sbjct: 335 gccgacgcggccatctcct 317
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 93 gcggcctgctgcagcggcg 111 ||||||||||||||||||| Sbjct: 736553 gcggcctgctgcagcggcg 736571 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 93 gcggcctgctgcagcggcg 111 ||||||||||||||||||| Sbjct: 732426 gcggcctgctgcagcggcg 732444
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 93 gcggcctgctgcagcggcg 111 ||||||||||||||||||| Sbjct: 702251 gcggcctgctgcagcggcg 702269 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 93 gcggcctgctgcagcggcg 111 ||||||||||||||||||| Sbjct: 692574 gcggcctgctgcagcggcg 692592
>gb|AF115380.1|AF115380 Rattus norvegicus Mcl-1 protein mRNA, complete cds Length = 993 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 6 gccgacgcggccatctcct 24 ||||||||||||||||||| Sbjct: 287 gccgacgcggccatctcct 269
>emb|Y08691.1|OSLPI O.sativa mRNA for lipid transfer protein Length = 799 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 93 gcggcctgctgcagcggcg 111 ||||||||||||||||||| Sbjct: 248 gcggcctgctgcagcggcg 266
>emb|X83434.1|OSLTPB1 O.sativa mRNA for lipid transfer protein, b1 Length = 692 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 93 gcggcctgctgcagcggcg 111 ||||||||||||||||||| Sbjct: 141 gcggcctgctgcagcggcg 159
>dbj|AK107447.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-128-C01, full insert sequence Length = 718 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 93 gcggcctgctgcagcggcg 111 ||||||||||||||||||| Sbjct: 270 gcggcctgctgcagcggcg 252
>dbj|AK070414.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023053H09, full insert sequence Length = 2882 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 93 gcggcctgctgcagcggcg 111 ||||||||||||||||||| Sbjct: 2255 gcggcctgctgcagcggcg 2273
>gb|BC078835.1| Rattus norvegicus myeloid cell leukemia sequence 1, mRNA (cDNA clone MGC:93459 IMAGE:7121699), complete cds Length = 2130 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 6 gccgacgcggccatctcct 24 ||||||||||||||||||| Sbjct: 355 gccgacgcggccatctcct 337
>dbj|AK059819.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-C07, full insert sequence Length = 1003 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 93 gcggcctgctgcagcggcg 111 ||||||||||||||||||| Sbjct: 464 gcggcctgctgcagcggcg 482
>dbj|AK059808.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-A04, full insert sequence Length = 995 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 93 gcggcctgctgcagcggcg 111 ||||||||||||||||||| Sbjct: 480 gcggcctgctgcagcggcg 498
>dbj|AK058896.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-G08, full insert sequence Length = 840 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 93 gcggcctgctgcagcggcg 111 ||||||||||||||||||| Sbjct: 247 gcggcctgctgcagcggcg 265
>gb|AF017361.1|AF017361 Oryza sativa lipid transfer protein LPT IV mRNA, complete cds Length = 507 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 93 gcggcctgctgcagcggcg 111 ||||||||||||||||||| Sbjct: 183 gcggcctgctgcagcggcg 201
>gb|AF017359.1|AF017359 Oryza sativa lipid transfer protein LPT II mRNA, complete cds Length = 845 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 93 gcggcctgctgcagcggcg 111 ||||||||||||||||||| Sbjct: 229 gcggcctgctgcagcggcg 247
>gb|AF017358.1|AF017358 Oryza sativa lipid transfer protein mRNA, complete cds Length = 695 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 93 gcggcctgctgcagcggcg 111 ||||||||||||||||||| Sbjct: 147 gcggcctgctgcagcggcg 165
>gb|AC092479.16| Mus musculus strain C57BL/6J chromosome 3 clone rp23-231l15, complete sequence Length = 142159 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 6 gccgacgcggccatctcct 24 ||||||||||||||||||| Sbjct: 73077 gccgacgcggccatctcct 73095
>gb|AC093317.22| Mus musculus strain C57BL/6J chromosome 3 clone rp23-218k6, complete sequence Length = 214004 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 6 gccgacgcggccatctcct 24 ||||||||||||||||||| Sbjct: 212322 gccgacgcggccatctcct 212340
>gb|U35623.1|MMU35623 Mus musculus EAT/MCL-1 mRNA, complete cds Length = 3396 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 6 gccgacgcggccatctcct 24 ||||||||||||||||||| Sbjct: 335 gccgacgcggccatctcct 317
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 93 gcggcctgctgcagcggcg 111 ||||||||||||||||||| Sbjct: 702251 gcggcctgctgcagcggcg 702269 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 93 gcggcctgctgcagcggcg 111 ||||||||||||||||||| Sbjct: 692574 gcggcctgctgcagcggcg 692592
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 93 gcggcctgctgcagcggcg 111 ||||||||||||||||||| Sbjct: 736553 gcggcctgctgcagcggcg 736571 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 93 gcggcctgctgcagcggcg 111 ||||||||||||||||||| Sbjct: 732426 gcggcctgctgcagcggcg 732444
>emb|BX000511.2|CNS08CE1 Oryza sativa chromosome 12, . BAC OJ1136_E08 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 118211 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 93 gcggcctgctgcagcggcg 111 ||||||||||||||||||| Sbjct: 46708 gcggcctgctgcagcggcg 46690 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 93 gcggcctgctgcagcggcg 111 ||||||||||||||||||| Sbjct: 42581 gcggcctgctgcagcggcg 42563
>emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa0025K19 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 181322 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 93 gcggcctgctgcagcggcg 111 ||||||||||||||||||| Sbjct: 50398 gcggcctgctgcagcggcg 50380 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 93 gcggcctgctgcagcggcg 111 ||||||||||||||||||| Sbjct: 40721 gcggcctgctgcagcggcg 40703
>gb|U77295.1|OSU77295 Oryza sativa lipid transfer protein (LTP) mRNA, complete cds Length = 799 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 93 gcggcctgctgcagcggcg 111 ||||||||||||||||||| Sbjct: 248 gcggcctgctgcagcggcg 266
>gb|U31766.1|OSU31766 Oryza sativa lipid transfer protein precursor (LTP2) mRNA, complete cds Length = 840 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 93 gcggcctgctgcagcggcg 111 ||||||||||||||||||| Sbjct: 224 gcggcctgctgcagcggcg 242 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 731,144 Number of Sequences: 3902068 Number of extensions: 731144 Number of successful extensions: 55883 Number of sequences better than 10.0: 72 Number of HSP's better than 10.0 without gapping: 72 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 55505 Number of HSP's gapped (non-prelim): 377 length of query: 134 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 113 effective length of database: 17,151,101,840 effective search space: 1938074507920 effective search space used: 1938074507920 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)