ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd26e15 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_464345.1| Oryza sativa (japonica cultivar-group), mRNA Length = 615 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 235 cgacttcgagagggccttcaagatccacgacaagctacacatcggcct 282 ||||||| |||||| |||||||||||||||||||| |||||||||| Sbjct: 111 cgacttccagagggtgttcaagatccacgacaagctctacatcggcct 158
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 235 cgacttcgagagggccttcaagatccacgacaagctacacatcggcct 282 ||||||| |||||| |||||||||||||||||||| |||||||||| Sbjct: 4601060 cgacttccagagggtgttcaagatccacgacaagctctacatcggcct 4601013 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 13425069 ccgcgccgccgcctccctccgctc 13425046 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 3884353 ccgcgccgccgcctccctccgctc 3884376
>dbj|AP004087.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1297_C09 Length = 163378 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 235 cgacttcgagagggccttcaagatccacgacaagctacacatcggcct 282 ||||||| |||||| |||||||||||||||||||| |||||||||| Sbjct: 136439 cgacttccagagggtgttcaagatccacgacaagctctacatcggcct 136392
>gb|BT018301.1| Zea mays clone EL01T0206D12.c mRNA sequence Length = 1117 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 236 gacttcgagagggccttcaagatccacgacaagctacacatcggcct 282 |||||| |||||| |||||||||||||||||||| |||||||||| Sbjct: 348 gacttccagagggtgttcaagatccacgacaagctctacatcggcct 394
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 236 gacttcgagagggccttcaagatccacgacaagctacacatcggcct 282 |||||| |||||| |||||||||||||||||||| |||||||||| Sbjct: 25818847 gacttccagagggtgttcaagatccacgacaagctctacatcggcct 25818801 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 18009057 ccgcgccgccgcctccctccgctc 18009080 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 13625086 ccgcgccgccgcctccctccgctc 13625109
>dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0416A11 Length = 171519 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 236 gacttcgagagggccttcaagatccacgacaagctacacatcggcct 282 |||||| |||||| |||||||||||||||||||| |||||||||| Sbjct: 101051 gacttccagagggtgttcaagatccacgacaagctctacatcggcct 101005
>dbj|AK070915.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064O06, full insert sequence Length = 1040 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 236 gacttcgagagggccttcaagatccacgacaagctacacatcggcct 282 |||||| |||||| |||||||||||||||||||| |||||||||| Sbjct: 207 gacttccagagggtgttcaagatccacgacaagctctacatcggcct 253
>gb|AY104986.1| Zea mays PCO060249 mRNA sequence Length = 1122 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 236 gacttcgagagggccttcaagatccacgacaagctacacatcggcct 282 |||||| |||||| |||||||||||||||||||| |||||||||| Sbjct: 327 gacttccagagggtgttcaagatccacgacaagctctacatcggcct 373
>dbj|AB026565.1| Oryza sativa (japonica cultivar-group) OsPBC1 mRNA for beta 3 subunit of 20S proteasome, complete cds Length = 929 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 236 gacttcgagagggccttcaagatccacgacaagctacacatcggcct 282 |||||| |||||| |||||||||||||||||||| |||||||||| Sbjct: 209 gacttccagagggtgttcaagatccacgacaagctctacatcggcct 255
>ref|XM_855868.1| PREDICTED: Canis familiaris similar to Kinesin-like protein KIF3A (Microtubule plus end-directed kinesin motor 3A), transcript variant 8 (LOC474675), mRNA Length = 2381 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 535 agagggggttgatgaagagggtgagaa 561 |||||||| |||||||||||||||||| Sbjct: 1275 agagggggatgatgaagagggtgagaa 1301
>ref|XM_474788.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1653 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 436 gcgccgccgcctccctgcgctc 457 |||||||||||||||||||||| Sbjct: 581 gcgccgccgcctccctgcgctc 560
>emb|AL607008.2|OSJN00119 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0026E15, complete sequence Length = 137874 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 436 gcgccgccgcctccctgcgctc 457 |||||||||||||||||||||| Sbjct: 113440 gcgccgccgcctccctgcgctc 113461
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 436 gcgccgccgcctccctgcgctc 457 |||||||||||||||||||||| Sbjct: 6559192 gcgccgccgcctccctgcgctc 6559213 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 461 gccgccgccgtcgcccattgccgt 484 ||||||||||||||||| |||||| Sbjct: 27241933 gccgccgccgtcgcccactgccgt 27241956 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 464 gccgccgtcgcccattgccg 483 |||||||||||||||||||| Sbjct: 22530938 gccgccgtcgcccattgccg 22530957 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 6313220 ccgcgccgccgcctccctccgctc 6313243
>dbj|AK121999.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033110G11, full insert sequence Length = 1768 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 436 gcgccgccgcctccctgcgctc 457 |||||||||||||||||||||| Sbjct: 615 gcgccgccgcctccctgcgctc 594
>emb|AL136090.12| Human DNA sequence from clone RP11-97N19 on chromosome 20 Contains the 5' end of the SLC24A3 gene for solute carrier family 24 (sodium/potassium/calcium exchanger) member 3, a novel gene and a CpG island, complete sequence Length = 185473 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 433 cccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| |||||| Sbjct: 169292 cccgcgccgccgcctcccggcgctc 169268
>gb|AF314822.1|AF314822 Mus musculus strain 129/SvJ K+-dependent Na/Ca exchanger (Slc24A3) gene, partial cds Length = 907 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 433 cccgcgccgccgcctccctgcgctc 457 ||||| ||||||||||||||||||| Sbjct: 397 cccgcaccgccgcctccctgcgctc 373
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 443 cgcctccctgcgctctttgccgccgccgtcgcc 475 ||||||||||||||| |||| ||||||||||| Sbjct: 17151221 cgcctccctgcgctcgctgcctccgccgtcgcc 17151253 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 18056594 ccgcgccgccgcctccctccgctc 18056571 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 17969384 ccgcgccgccgcctccctccgctc 17969361 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 17036834 ccgcgccgccgcctccctccgctc 17036811 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 12778367 ccgcgccgccgcctccctccgctc 12778344
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 434 ccgcgccgccgcctccctgcgctct 458 |||||||||||||||||| |||||| Sbjct: 3005258 ccgcgccgccgcctccctccgctct 3005234 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 15118643 ccgcgccgccgcctccctccgctc 15118620 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 15109891 ccgcgccgccgcctccctccgctc 15109868 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 10497139 ccgcgccgccgcctccctccgctc 10497162 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 7891132 ccgcgccgccgcctccctccgctc 7891155
>dbj|AP005409.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0024L18 Length = 150128 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 434 ccgcgccgccgcctccctgcgctct 458 |||||||||||||||||| |||||| Sbjct: 51313 ccgcgccgccgcctccctccgctct 51289
>dbj|AP005389.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0091C18 Length = 154416 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 443 cgcctccctgcgctctttgccgccgccgtcgcc 475 ||||||||||||||| |||| ||||||||||| Sbjct: 75076 cgcctccctgcgctcgctgcctccgccgtcgcc 75108
>dbj|AP005298.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1770_H03 Length = 189893 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 443 cgcctccctgcgctctttgccgccgccgtcgcc 475 ||||||||||||||| |||| ||||||||||| Sbjct: 11846 cgcctccctgcgctcgctgcctccgccgtcgcc 11878
>emb|AJ324344.1|HSA324344 Homo sapiens genomic sequence surrounding NotI site, clone NR5-DA13R Length = 838 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 290 tcccttttttcaatattttgt 310 ||||||||||||||||||||| Sbjct: 811 tcccttttttcaatattttgt 831
>emb|X14428.1|GDMYAL12 Gallus gallus MLC gene for embryonic myosin alkali light chain exons 1 and 2 and joined CDS Length = 1575 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 460 tgccgccgccgtcgcccattg 480 ||||||||||||||||||||| Sbjct: 766 tgccgccgccgtcgcccattg 746
>gb|AY487540.1| Uncultured organism clone 5B17 nitrilase (BD5307) gene, complete cds Length = 966 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 aggcttgctccactcgcctcg 201 ||||||||||||||||||||| Sbjct: 359 aggcttgctccactcgcctcg 339
>emb|AL772192.8| Mouse DNA sequence from clone RP23-161B16 on chromosome 2, complete sequence Length = 61365 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 433 cccgcgccgccgcctccctgcgctc 457 ||||| ||||||||||||||||||| Sbjct: 3590 cccgcaccgccgcctccctgcgctc 3566
>ref|XM_481996.1| Oryza sativa (japonica cultivar-group), mRNA Length = 513 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 147 ccgcgccgccgcctccctccgctc 124
>ref|XM_482132.1| Oryza sativa (japonica cultivar-group), mRNA Length = 498 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 243 ccgcgccgccgcctccctccgctc 220
>gb|BC032670.1| Homo sapiens protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, mRNA (cDNA clone MGC:45385 IMAGE:5539318), complete cds Length = 3967 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 tctgaaggcttgctccactc 195 |||||||||||||||||||| Sbjct: 199 tctgaaggcttgctccactc 180
>ref|XM_519755.1| PREDICTED: Pan troglodytes similar to RIKEN cDNA A030012M09 gene (LOC464172), mRNA Length = 1074 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 tctgaaggcttgctccactc 195 |||||||||||||||||||| Sbjct: 102 tctgaaggcttgctccactc 83
>ref|XM_465324.1| Oryza sativa (japonica cultivar-group), mRNA Length = 501 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 491 ccgcgccgccgcctccctccgctc 468
>ref|XM_464293.1| Oryza sativa (japonica cultivar-group), mRNA Length = 378 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 123 ccgcgccgccgcctccctccgctc 100
>ref|XM_450704.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1494 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 433 cccgcgccgccgcctccctg 452 |||||||||||||||||||| Sbjct: 1387 cccgcgccgccgcctccctg 1368
>ref|XM_463499.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1656 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 gcgccgccgcctccctgcgc 455 |||||||||||||||||||| Sbjct: 491 gcgccgccgcctccctgcgc 510
>ref|NM_190992.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 795 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 403 ccgcgccgccgcctccctccgctc 380
>ref|XM_477892.1| Oryza sativa (japonica cultivar-group), mRNA Length = 378 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 317 ccgcgccgccgcctccctccgctc 340
>ref|XM_473387.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 657 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 461 gccgccgccgtcgcccattgccgt 484 ||||||||||||||||| |||||| Sbjct: 475 gccgccgccgtcgcccactgccgt 452
>ref|NM_052937.1| Homo sapiens protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 (PCMTD1), mRNA Length = 3967 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 tctgaaggcttgctccactc 195 |||||||||||||||||||| Sbjct: 199 tctgaaggcttgctccactc 180
>gb|AY360390.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0074N12, complete sequence Length = 187972 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 115546 ccgcgccgccgcctccctccgctc 115523
>gb|AC135927.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683B02, complete sequence Length = 146435 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 75881 ccgcgccgccgcctccctccgctc 75904
>gb|AC146522.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0039A07 map near 50283S, complete sequence Length = 158158 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 67632 ccgcgccgccgcctccctccgctc 67609
>gb|AC135928.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0686B10, complete sequence Length = 159672 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 127140 ccgcgccgccgcctccctccgctc 127163
>ref|XM_864168.1| PREDICTED: Bos taurus similar to Thyroliberin precursor (Thyrotropin releasing hormone) (TRH) (Thyrotropin releasing factor) (TSH-releasing factor) (Protirelin) (LOC613414), partial mRNA Length = 1111 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 429 ctcacccgcgccgccgcctc 448 |||||||||||||||||||| Sbjct: 203 ctcacccgcgccgccgcctc 222
>ref|XM_599521.2| PREDICTED: Bos taurus similar to R119.5, transcript variant 2 (LOC521261), mRNA Length = 1137 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 tctgaaggcttgctccactc 195 |||||||||||||||||||| Sbjct: 168 tctgaaggcttgctccactc 149
>ref|XM_874276.1| PREDICTED: Bos taurus similar to R119.5, transcript variant 3 (LOC521261), mRNA Length = 1056 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 tctgaaggcttgctccactc 195 |||||||||||||||||||| Sbjct: 168 tctgaaggcttgctccactc 149
>gb|AC137594.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0065A15, complete sequence Length = 168806 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 459 ttgccgccgccgtcgcccat 478 |||||||||||||||||||| Sbjct: 132846 ttgccgccgccgtcgcccat 132865
>gb|AC104709.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1214_E03, complete sequence Length = 144601 Score = 40.1 bits (20), Expect = 7.6 Identities = 35/39 (89%), Gaps = 2/39 (5%) Strand = Plus / Plus Query: 437 cgccgccgcctccctgcgctctttgccgccgccgtcgcc 475 ||||||||||||||| | |||| ||||||||||||||| Sbjct: 71131 cgccgccgcctccctactctct--gccgccgccgtcgcc 71167
>ref|XM_654134.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1622.2), mRNA Length = 1656 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 tctaccacgccgtctccatt 419 |||||||||||||||||||| Sbjct: 76 tctaccacgccgtctccatt 95
>gb|AC136523.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0018C06, complete sequence Length = 179695 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 63358 ccgcgccgccgcctccctccgctc 63335
>gb|AC121366.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0111K12, complete sequence Length = 127901 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 3722 ccgcgccgccgcctccctccgctc 3745
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 8931842 ccgcgccgccgcctccctccgctc 8931819 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 4931329 ccgcgccgccgcctcccttcgctc 4931352
>ref|XM_535066.2| PREDICTED: Canis familiaris similar to R119.5, transcript variant 1 (LOC477874), mRNA Length = 1778 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 tctgaaggcttgctccactc 195 |||||||||||||||||||| Sbjct: 233 tctgaaggcttgctccactc 214
>ref|XM_851556.1| PREDICTED: Canis familiaris similar to R119.5, transcript variant 4 (LOC477874), mRNA Length = 2020 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 tctgaaggcttgctccactc 195 |||||||||||||||||||| Sbjct: 556 tctgaaggcttgctccactc 537
>ref|XM_843527.1| PREDICTED: Canis familiaris similar to R119.5, transcript variant 3 (LOC477874), mRNA Length = 2101 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 tctgaaggcttgctccactc 195 |||||||||||||||||||| Sbjct: 556 tctgaaggcttgctccactc 537
>gb|AC105731.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0064E16, complete sequence Length = 159092 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 64218 ccgcgccgccgcctcccttcgctc 64195
>gb|AC111131.8| Mus musculus, clone RP23-340N7, complete sequence Length = 202386 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 283 gaagccctcccttttttcaatattttgt 310 |||||||| |||| |||||||||||||| Sbjct: 96360 gaagccctaccttgtttcaatattttgt 96387
>emb|AL109838.11|HSDJ796I8 Human DNA sequence from clone RP4-796I8 on chromosome 20 Contains a putative novel gene, ESTs, STSs and GSSs, complete sequence Length = 121235 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 ctgaagccctcccttttttc 300 |||||||||||||||||||| Sbjct: 7204 ctgaagccctcccttttttc 7185
>emb|AL606615.4|OSJN00048 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086B14, complete sequence Length = 175698 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 464 gccgccgtcgcccattgccg 483 |||||||||||||||||||| Sbjct: 134693 gccgccgtcgcccattgccg 134712
>emb|CR859527.1| Pongo pygmaeus mRNA; cDNA DKFZp459B0325 (from clone DKFZp459B0325) Length = 4223 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 tctgaaggcttgctccactc 195 |||||||||||||||||||| Sbjct: 456 tctgaaggcttgctccactc 437
>emb|CR860173.1| Pongo pygmaeus mRNA; cDNA DKFZp469O171 (from clone DKFZp469O171) Length = 4052 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 tctgaaggcttgctccactc 195 |||||||||||||||||||| Sbjct: 305 tctgaaggcttgctccactc 286
>emb|BX323037.10| Zebrafish DNA sequence from clone DKEYP-8B6 in linkage group 24, complete sequence Length = 173818 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 ttttttcaatattttgtcat 313 |||||||||||||||||||| Sbjct: 152621 ttttttcaatattttgtcat 152640
>dbj|AK056952.1| Homo sapiens cDNA FLJ32390 fis, clone SKMUS1000177, weakly similar to PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE (EC 2.1.1.77) Length = 1287 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 tctgaaggcttgctccactc 195 |||||||||||||||||||| Sbjct: 304 tctgaaggcttgctccactc 285
>tpg|BK000935.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M341, complete sequence Length = 19879 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 4242 ccgcgccgccgcctccctccgctc 4265
>emb|CR594752.1| full-length cDNA clone CS0DI085YE06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1659 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 tctgaaggcttgctccactc 195 |||||||||||||||||||| Sbjct: 509 tctgaaggcttgctccactc 490
>gb|AC103769.2| Homo sapiens chromosome 8, clone RP11-110G21, complete sequence Length = 138097 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 tctgaaggcttgctccactc 195 |||||||||||||||||||| Sbjct: 80922 tctgaaggcttgctccactc 80941
>gb|AC113339.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBb0047B19, from chromosome 10, complete sequence Length = 137015 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 121439 ccgcgccgccgcctccctccgctc 121416
>gb|AC064807.7| Homo sapiens chromosome 8, clone RP11-546K22, complete sequence Length = 203270 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 tctgaaggcttgctccactc 195 |||||||||||||||||||| Sbjct: 199662 tctgaaggcttgctccactc 199643
>gb|AC067932.9| Homo sapiens chromosome 8, clone RP11-78F5, complete sequence Length = 163777 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 tctgaaggcttgctccactc 195 |||||||||||||||||||| Sbjct: 3467 tctgaaggcttgctccactc 3486
>gb|AC139168.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1364E02, complete sequence Length = 126027 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 122730 ccgcgccgccgcctccctccgctc 122707
>gb|AC135209.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0071M09, complete sequence Length = 143595 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 56703 ccgcgccgccgcctccctccgctc 56680
>ref|XM_393842.2| PREDICTED: Apis mellifera similar to GH11047p (LOC410362), mRNA Length = 1983 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 345 cagataacatcaggcgaggagctg 368 ||||||| |||||||||||||||| Sbjct: 1213 cagataagatcaggcgaggagctg 1236
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 18475962 ccgcgccgccgcctccctccgctc 18475985
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 27996794 ccgcgccgccgcctccctccgctc 27996771 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 27951624 ccgcgccgccgcctccctccgctc 27951601 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 14322020 ccgcgccgccgcctccctccgctc 14321997
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 7678445 ccgcgccgccgcctccctccgctc 7678422
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 459 ttgccgccgccgtcgcccat 478 |||||||||||||||||||| Sbjct: 19649771 ttgccgccgccgtcgcccat 19649790 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 433 cccgcgccgccgcctccctg 452 |||||||||||||||||||| Sbjct: 12317397 cccgcgccgccgcctccctg 12317378 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 9680435 ccgcgccgccgcctccctccgctc 9680412 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 1513292 ccgcgccgccgcctccctccgctc 1513269
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.6 Identities = 35/39 (89%), Gaps = 2/39 (5%) Strand = Plus / Plus Query: 437 cgccgccgcctccctgcgctctttgccgccgccgtcgcc 475 ||||||||||||||| | |||| ||||||||||||||| Sbjct: 27475001 cgccgccgcctccctactctct--gccgccgccgtcgcc 27475037 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 17329828 ccgcgccgccgcctccctccgctc 17329851 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 11980544 ccgcgccgccgcctccctccgctc 11980521
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 8929677 ccgcgccgccgcctccctccgctc 8929654 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 4930544 ccgcgccgccgcctcccttcgctc 4930567
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 gcgccgccgcctccctgcgc 455 |||||||||||||||||||| Sbjct: 37860829 gcgccgccgcctccctgcgc 37860810 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 34199951 ccgcgccgccgcctccctccgctc 34199974
>dbj|AP003073.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0702B09 Length = 172541 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 35637 ccgcgccgccgcctccctccgctc 35660
>gb|AC007677.3| Homo sapiens BAC clone RP11-86N1 from 2, complete sequence Length = 166949 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 gttttagggtttctttgtgt 337 |||||||||||||||||||| Sbjct: 30951 gttttagggtttctttgtgt 30970
>dbj|AP004669.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0491F11 Length = 152274 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 gcgccgccgcctccctgcgc 455 |||||||||||||||||||| Sbjct: 82185 gcgccgccgcctccctgcgc 82166
>dbj|AP006524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0077M23 Length = 167264 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 4707 ccgcgccgccgcctccctccgctc 4730
>dbj|AP005929.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0071G09 Length = 169148 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 75363 ccgcgccgccgcctccctccgctc 75386
>dbj|AP004679.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0021N09 Length = 156565 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 32419 ccgcgccgccgcctccctccgctc 32442
>dbj|AP003572.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0459H02 Length = 168230 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 153576 ccgcgccgccgcctccctccgctc 153599
>dbj|AP005744.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1512_E04 Length = 157848 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 131405 ccgcgccgccgcctccctccgctc 131382
>dbj|AP004340.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0523A04 Length = 149049 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 140130 ccgcgccgccgcctccctccgctc 140153
>dbj|AP005444.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0011H01 Length = 165634 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 124547 ccgcgccgccgcctccctccgctc 124524 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 115795 ccgcgccgccgcctccctccgctc 115772
>dbj|AP005104.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0042E08 Length = 166257 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 48468 ccgcgccgccgcctccctccgctc 48491
>dbj|AP005166.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0058D03 Length = 184235 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 122362 ccgcgccgccgcctccctccgctc 122339
>dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1168F12 Length = 141524 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 433 cccgcgccgccgcctccctg 452 |||||||||||||||||||| Sbjct: 100951 cccgcgccgccgcctccctg 100932
>dbj|AP004113.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1116_A06 Length = 176062 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 140685 ccgcgccgccgcctccctccgctc 140708
>dbj|AP004836.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0030G02 Length = 187265 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 82824 ccgcgccgccgcctccctccgctc 82847
>dbj|AP005811.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0706E03 Length = 188028 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 120532 ccgcgccgccgcctccctccgctc 120509
>dbj|AP005746.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0018I03 Length = 145818 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 41536 ccgcgccgccgcctccctccgctc 41513
>dbj|AP004177.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1116_E03 Length = 126845 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 10998 ccgcgccgccgcctccctccgctc 10975
>dbj|AP006752.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1399_D07, complete sequence Length = 65000 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 459 ttgccgccgccgtcgcccat 478 |||||||||||||||||||| Sbjct: 59253 ttgccgccgccgtcgcccat 59272
>emb|BX005255.10| Mouse DNA sequence from clone RP23-228N14 on chromosome X, complete sequence Length = 230114 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 283 gaagccctcccttttttcaatattttgt 310 |||||||| |||| |||||||||||||| Sbjct: 80203 gaagccctaccttgtttcaatattttgt 80230
>dbj|AP005489.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0013H03 Length = 152998 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 141629 ccgcgccgccgcctccctccgctc 141606 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 54419 ccgcgccgccgcctccctccgctc 54396
>dbj|AP004663.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0410E02 Length = 144294 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 72351 ccgcgccgccgcctccctccgctc 72328
>dbj|AP004382.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0418E08 Length = 141040 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 7491 ccgcgccgccgcctccctccgctc 7514
>dbj|AK109463.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-D05, full insert sequence Length = 1979 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 gcgccgccgcctccctgcgc 455 |||||||||||||||||||| Sbjct: 1238 gcgccgccgcctccctgcgc 1219
>dbj|AK102775.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107H21, full insert sequence Length = 742 Score = 40.1 bits (20), Expect = 7.6 Identities = 35/39 (89%), Gaps = 2/39 (5%) Strand = Plus / Plus Query: 437 cgccgccgcctccctgcgctctttgccgccgccgtcgcc 475 ||||||||||||||| | |||| ||||||||||||||| Sbjct: 20 cgccgccgcctccctactctct--gccgccgccgtcgcc 56
>emb|AL929543.7| Zebrafish DNA sequence from clone CH211-166M10 in linkage group 17, complete sequence Length = 147094 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 tttttcaatattttgtcatg 314 |||||||||||||||||||| Sbjct: 140404 tttttcaatattttgtcatg 140385
>dbj|AK058689.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-B02, full insert sequence Length = 643 Score = 40.1 bits (20), Expect = 7.6 Identities = 35/39 (89%), Gaps = 2/39 (5%) Strand = Plus / Plus Query: 437 cgccgccgcctccctgcgctctttgccgccgccgtcgcc 475 ||||||||||||||| | |||| ||||||||||||||| Sbjct: 13 cgccgccgcctccctactctct--gccgccgccgtcgcc 49
>gb|AC093478.9| Mus musculus chromosome 10, clone RP23-58C12, complete sequence Length = 242324 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 gatcttgacttcctcatctg 179 |||||||||||||||||||| Sbjct: 177112 gatcttgacttcctcatctg 177131
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 450 ctgcgctctttgccgccgcc 469 |||||||||||||||||||| Sbjct: 22627 ctgcgctctttgccgccgcc 22646
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 7682644 ccgcgccgccgcctccctccgctc 7682621
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 27970923 ccgcgccgccgcctccctccgctc 27970900 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 14404022 ccgcgccgccgcctccctccgctc 14403999
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 18402188 ccgcgccgccgcctccctccgctc 18402211
>emb|AL935067.2|CNS08CCJ Oryza sativa chromosome 12, . BAC OSJNBa0072A13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 130954 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 119328 ccgcgccgccgcctccctccgctc 119305
>emb|AL845344.4|CNS08CB6 Oryza sativa chromosome 12, . BAC OSJNBb0108O14 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 138585 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 127861 ccgcgccgccgcctccctccgctc 127884
>emb|AL606989.3|OSJN00120 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0033G08, complete sequence Length = 121591 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 82886 ccgcgccgccgcctccctccgctc 82909
>emb|AL606728.3|OSJN00102 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0038F03, complete sequence Length = 136656 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 461 gccgccgccgtcgcccattgccgt 484 ||||||||||||||||| |||||| Sbjct: 73022 gccgccgccgtcgcccactgccgt 73045
>dbj|AP005795.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1090H08 Length = 200720 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 ccgcgccgccgcctccctgcgctc 457 |||||||||||||||||| ||||| Sbjct: 60390 ccgcgccgccgcctccctccgctc 60367
>dbj|AP003566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0008G24 Length = 152736 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 gcgccgccgcctccctgcgc 455 |||||||||||||||||||| Sbjct: 120077 gcgccgccgcctccctgcgc 120058 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,029,160 Number of Sequences: 3902068 Number of extensions: 5029160 Number of successful extensions: 127026 Number of sequences better than 10.0: 115 Number of HSP's better than 10.0 without gapping: 130 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 122189 Number of HSP's gapped (non-prelim): 4838 length of query: 562 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 539 effective length of database: 17,143,297,704 effective search space: 9240237462456 effective search space used: 9240237462456 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
