ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd26e01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_493940.1| Oryza sativa (japonica cultivar-group), Ozsa8005 predicted mRNA Length = 1449 Score = 533 bits (269), Expect = e-148 Identities = 510/590 (86%), Gaps = 3/590 (0%) Strand = Plus / Plus Query: 13 tgcagtttctatgtgcggggtgaatgtaccagnagcgctgagtgcccctatcgccacgag 72 ||||||||||||||||| ||||||||||| || | ||||| ||||| ||||| || ||| Sbjct: 487 tgcagtttctatgtgcgtggtgaatgtacaagaggtgctgaatgcccttatcgacatgag 546 Query: 73 atgcctgagacaggggagttatcccagcagaacatcaaagatcgctactatggagttaat 132 |||||||| || || |||||||| ||||||||||| |||||||| ||||||||||||||| Sbjct: 547 atgcctgaaactggagagttatctcagcagaacattaaagatcgttactatggagttaat 606 Query: 133 gacccagttgctctcaagcttttgggtaaggcaggtgagatgccatctctacaaccacca 192 || ||||||||| | || |||||||||||||| |||||||||||||| || ||| ||| Sbjct: 607 gatccagttgctttgaaacttttgggtaaggccggtgagatgccatccctgacacctcca 666 Query: 193 gatgatgagactataaggacactctacattggtggacttgataaccgagtcagtgagcag 252 || ||||||| |||||||||||| ||||||||||| ||| |||| ||| ||| |||||| Sbjct: 667 gacgatgagagtataaggacactttacattggtggccttaataatcgaatcaccgagcag 726 Query: 253 gatttgagggatcagttttatgcacatggtgagatcgaatccatcaggatggtaatccag 312 |||||||||||||| ||||| ||||||||||| || || ||||| |||||||| | || Sbjct: 727 gatttgagggatcaattttacgcacatggtgaaattgagtccataaggatggttctgcaa 786 Query: 313 cgtgcttgtgcatttgtgacgtacacaacaagagaaggtgctgagagagctgcagaggag 372 ||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||| Sbjct: 787 cgtgcctgtgcatttgtgacgtacactacaagagaaggtgctgagaaagctgcagaggag 846 Query: 373 cttgctaacaagctagtcatcaagggtgtgcgcctgaagctcatgtggggcaagccccaa 432 ||||| |||||| |||||||||||||| | |||||||||||||||||||| ||||| ||| Sbjct: 847 cttgccaacaagttagtcatcaagggtatacgcctgaagctcatgtggggtaagcctcaa 906 Query: 433 gccccaaggccagatgatgacgaggctgggaggcaaggccatgtttcccatggaggatta 492 || |||| |||||| || || || ||||| |||||||| |||||| | ||||||||| | Sbjct: 907 gcaccaaagccagaagacgatgaagctggaaggcaagggcatgttgcacatggaggaatg 966 Query: 493 ctccctagggctgttatatctcagcagcagagcagcgaccagcctcagccacctgggatg 552 ||||| |||||||||||||||||||||||||| | ||||||||||| |||||||| ||| Sbjct: 967 ctccccagggctgttatatctcagcagcagagtggtgaccagcctcaaccacctggaatg 1026 Query: 553 gagggacagcaacaagtggcaccaccaggatcaggctacttcaacattcc 602 |||||||| || ||| |||||| | |||||| ||||||||||||||| Sbjct: 1027 gagggacaacagcaa---gcaccatcgggatcatactacttcaacattcc 1073
>ref|XM_477474.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1461 Score = 533 bits (269), Expect = e-148 Identities = 478/548 (87%) Strand = Plus / Plus Query: 16 agtttctatgtgcggggtgaatgtaccagnagcgctgagtgcccctatcgccacgagatg 75 |||||||||||||| ||||||||||| || | ||||| ||||| ||||| || |||||| Sbjct: 490 agtttctatgtgcgtggtgaatgtacaagaggtgctgaatgcccttatcgacatgagatg 549 Query: 76 cctgagacaggggagttatcccagcagaacatcaaagatcgctactatggagttaatgac 135 ||||| || || |||||||| |||||||||||||||||||| ||||| |||||||| || Sbjct: 550 cctgaaactggagagttatctcagcagaacatcaaagatcgttactacggagttaacgat 609 Query: 136 ccagttgctctcaagcttttgggtaaggcaggtgagatgccatctctacaaccaccagat 195 ||||||||| | ||||||||| ||||||| |||||||||||||| || ||| |||||| Sbjct: 610 ccagttgctttgaagcttttgagtaaggctggtgagatgccatccctgacacccccagat 669 Query: 196 gatgagactataaggacactctacattggtggacttgataaccgagtcagtgagcaggat 255 ||||||| |||||||||||| ||||||||||| ||||||| ||||||| |||||||||| Sbjct: 670 gatgagagtataaggacactttacattggtggccttgatagtcgagtcactgagcaggat 729 Query: 256 ttgagggatcagttttatgcacatggtgagatcgaatccatcaggatggtaatccagcgt 315 ||||||||||| |||||||| ||||||||||| || |||| || ||||| | |||||| Sbjct: 730 ttgagggatcaattttatgcccatggtgagattgagaccataagaatggttctgcagcgt 789 Query: 316 gcttgtgcatttgtgacgtacacaacaagagaaggtgctgagagagctgcagaggagctt 375 ||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 790 gcttgtgcatttgtgacttacactacaagagaaggtgctgagaaagctgcagaggagctc 849 Query: 376 gctaacaagctagtcatcaagggtgtgcgcctgaagctcatgtggggcaagccccaagcc 435 ||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 850 gctaacaagttagtcatcaagggtgtgcgtctgaagctcatgtggggcaagcctcaagca 909 Query: 436 ccaaggccagatgatgacgaggctgggaggcaaggccatgtttcccatggaggattactc 495 |||| || || || || || |||||||||||||| |||||| | ||||||||| | ||| Sbjct: 910 ccaaaaccggaggaagatgaagctgggaggcaagggcatgttgcacatggaggaatgctc 969 Query: 496 cctagggctgttatatctcagcagcagagcagcgaccagcctcagccacctgggatggag 555 ||||||||||| ||||||||||||||||| | ||||||||||| || ||||||||||| Sbjct: 970 cctagggctgtaatatctcagcagcagagtggtgaccagcctcaacctcctgggatggaa 1029 Query: 556 ggacagca 563 || ||||| Sbjct: 1030 ggccagca 1037
>dbj|AK120360.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067M02, full insert sequence Length = 2047 Score = 533 bits (269), Expect = e-148 Identities = 510/590 (86%), Gaps = 3/590 (0%) Strand = Plus / Plus Query: 13 tgcagtttctatgtgcggggtgaatgtaccagnagcgctgagtgcccctatcgccacgag 72 ||||||||||||||||| ||||||||||| || | ||||| ||||| ||||| || ||| Sbjct: 553 tgcagtttctatgtgcgtggtgaatgtacaagaggtgctgaatgcccttatcgacatgag 612 Query: 73 atgcctgagacaggggagttatcccagcagaacatcaaagatcgctactatggagttaat 132 |||||||| || || |||||||| ||||||||||| |||||||| ||||||||||||||| Sbjct: 613 atgcctgaaactggagagttatctcagcagaacattaaagatcgttactatggagttaat 672 Query: 133 gacccagttgctctcaagcttttgggtaaggcaggtgagatgccatctctacaaccacca 192 || ||||||||| | || |||||||||||||| |||||||||||||| || ||| ||| Sbjct: 673 gatccagttgctttgaaacttttgggtaaggccggtgagatgccatccctgacacctcca 732 Query: 193 gatgatgagactataaggacactctacattggtggacttgataaccgagtcagtgagcag 252 || ||||||| |||||||||||| ||||||||||| ||| |||| ||| ||| |||||| Sbjct: 733 gacgatgagagtataaggacactttacattggtggccttaataatcgaatcaccgagcag 792 Query: 253 gatttgagggatcagttttatgcacatggtgagatcgaatccatcaggatggtaatccag 312 |||||||||||||| ||||| ||||||||||| || || ||||| |||||||| | || Sbjct: 793 gatttgagggatcaattttacgcacatggtgaaattgagtccataaggatggttctgcaa 852 Query: 313 cgtgcttgtgcatttgtgacgtacacaacaagagaaggtgctgagagagctgcagaggag 372 ||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||| Sbjct: 853 cgtgcctgtgcatttgtgacgtacactacaagagaaggtgctgagaaagctgcagaggag 912 Query: 373 cttgctaacaagctagtcatcaagggtgtgcgcctgaagctcatgtggggcaagccccaa 432 ||||| |||||| |||||||||||||| | |||||||||||||||||||| ||||| ||| Sbjct: 913 cttgccaacaagttagtcatcaagggtatacgcctgaagctcatgtggggtaagcctcaa 972 Query: 433 gccccaaggccagatgatgacgaggctgggaggcaaggccatgtttcccatggaggatta 492 || |||| |||||| || || || ||||| |||||||| |||||| | ||||||||| | Sbjct: 973 gcaccaaagccagaagacgatgaagctggaaggcaagggcatgttgcacatggaggaatg 1032 Query: 493 ctccctagggctgttatatctcagcagcagagcagcgaccagcctcagccacctgggatg 552 ||||| |||||||||||||||||||||||||| | ||||||||||| |||||||| ||| Sbjct: 1033 ctccccagggctgttatatctcagcagcagagtggtgaccagcctcaaccacctggaatg 1092 Query: 553 gagggacagcaacaagtggcaccaccaggatcaggctacttcaacattcc 602 |||||||| || ||| |||||| | |||||| ||||||||||||||| Sbjct: 1093 gagggacaacagcaa---gcaccatcgggatcatactacttcaacattcc 1139
>dbj|AK111997.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D10, full insert sequence Length = 1637 Score = 533 bits (269), Expect = e-148 Identities = 510/590 (86%), Gaps = 3/590 (0%) Strand = Plus / Plus Query: 13 tgcagtttctatgtgcggggtgaatgtaccagnagcgctgagtgcccctatcgccacgag 72 ||||||||||||||||| ||||||||||| || | ||||| ||||| ||||| || ||| Sbjct: 261 tgcagtttctatgtgcgtggtgaatgtacaagaggtgctgaatgcccttatcgacatgag 320 Query: 73 atgcctgagacaggggagttatcccagcagaacatcaaagatcgctactatggagttaat 132 |||||||| || || |||||||| ||||||||||| |||||||| ||||||||||||||| Sbjct: 321 atgcctgaaactggagagttatctcagcagaacattaaagatcgttactatggagttaat 380 Query: 133 gacccagttgctctcaagcttttgggtaaggcaggtgagatgccatctctacaaccacca 192 || ||||||||| | || |||||||||||||| |||||||||||||| || ||| ||| Sbjct: 381 gatccagttgctttgaaacttttgggtaaggccggtgagatgccatccctgacacctcca 440 Query: 193 gatgatgagactataaggacactctacattggtggacttgataaccgagtcagtgagcag 252 || ||||||| |||||||||||| ||||||||||| ||| |||| ||| ||| |||||| Sbjct: 441 gacgatgagagtataaggacactttacattggtggccttaataatcgaatcaccgagcag 500 Query: 253 gatttgagggatcagttttatgcacatggtgagatcgaatccatcaggatggtaatccag 312 |||||||||||||| ||||| ||||||||||| || || ||||| |||||||| | || Sbjct: 501 gatttgagggatcaattttacgcacatggtgaaattgagtccataaggatggttctgcaa 560 Query: 313 cgtgcttgtgcatttgtgacgtacacaacaagagaaggtgctgagagagctgcagaggag 372 ||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||| Sbjct: 561 cgtgcctgtgcatttgtgacgtacactacaagagaaggtgctgagaaagctgcagaggag 620 Query: 373 cttgctaacaagctagtcatcaagggtgtgcgcctgaagctcatgtggggcaagccccaa 432 ||||| |||||| |||||||||||||| | |||||||||||||||||||| ||||| ||| Sbjct: 621 cttgccaacaagttagtcatcaagggtatacgcctgaagctcatgtggggtaagcctcaa 680 Query: 433 gccccaaggccagatgatgacgaggctgggaggcaaggccatgtttcccatggaggatta 492 || |||| |||||| || || || ||||| |||||||| |||||| | ||||||||| | Sbjct: 681 gcaccaaagccagaagacgatgaagctggaaggcaagggcatgttgcacatggaggaatg 740 Query: 493 ctccctagggctgttatatctcagcagcagagcagcgaccagcctcagccacctgggatg 552 ||||| |||||||||||||||||||||||||| | ||||||||||| |||||||| ||| Sbjct: 741 ctccccagggctgttatatctcagcagcagagtggtgaccagcctcaaccacctggaatg 800 Query: 553 gagggacagcaacaagtggcaccaccaggatcaggctacttcaacattcc 602 |||||||| || ||| |||||| | |||||| ||||||||||||||| Sbjct: 801 gagggacaacagcaa---gcaccatcgggatcatactacttcaacattcc 847
>dbj|AK111689.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003O14, full insert sequence Length = 1661 Score = 517 bits (261), Expect = e-143 Identities = 477/548 (87%), Gaps = 1/548 (0%) Strand = Plus / Plus Query: 16 agtttctatgtgcggggtgaatgtaccagnagcgctgagtgcccctatcgccacgagatg 75 |||||||||||||| ||||||||||| || | ||||| ||||| ||||| || |||||| Sbjct: 563 agtttctatgtgcgtggtgaatgtacaagaggtgctgaatgcccttatcgacatgagatg 622 Query: 76 cctgagacaggggagttatcccagcagaacatcaaagatcgctactatggagttaatgac 135 ||||| || || |||||||| |||||||||||||||||||| ||||| |||||||| || Sbjct: 623 cctgaaactggagagttatctcagcagaacatcaaagatcgttactacggagttaacgat 682 Query: 136 ccagttgctctcaagcttttgggtaaggcaggtgagatgccatctctacaaccaccagat 195 ||||||||| | ||||||||| ||||||| |||||||||||||| || ||| |||||| Sbjct: 683 ccagttgctttgaagcttttgagtaaggctggtgagatgccatccctgacacccccagat 742 Query: 196 gatgagactataaggacactctacattggtggacttgataaccgagtcagtgagcaggat 255 ||||||| |||||||||||| ||||||||||| ||||||| ||||||| |||||||||| Sbjct: 743 gatgagagtataaggacactttacattggtggccttgatagtcgagtcactgagcaggat 802 Query: 256 ttgagggatcagttttatgcacatggtgagatcgaatccatcaggatggtaatccagcgt 315 ||||||||||| |||||||| ||||||||||| || |||| || ||||| | |||||| Sbjct: 803 ttgagggatcaattttatgcccatggtgagattgagaccataagaatggttctgcagcgt 862 Query: 316 gcttgtgcatttgtgacgtacacaacaagagaaggtgctgagagagctgcagaggagctt 375 ||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 863 gcttgtgcatttgtgacttacactacaagagaaggtgctgagaaagctgcagaggagctc 922 Query: 376 gctaacaagctagtcatcaagggtgtgcgcctgaagctcatgtggggcaagccccaagcc 435 ||||||||| ||||||||||||||||||| ||||||||||||| ||||||||| ||||| Sbjct: 923 gctaacaagttagtcatcaagggtgtgcgtctgaagctcatgt-gggcaagcctcaagca 981 Query: 436 ccaaggccagatgatgacgaggctgggaggcaaggccatgtttcccatggaggattactc 495 |||| || || || || || |||||||||||||| |||||| | ||||||||| | ||| Sbjct: 982 ccaaaaccggaggaagatgaagctgggaggcaagggcatgttgcacatggaggaatgctc 1041 Query: 496 cctagggctgttatatctcagcagcagagcagcgaccagcctcagccacctgggatggag 555 ||||||||||| ||||||||||||||||| | ||||||||||| || ||||||||||| Sbjct: 1042 cctagggctgtaatatctcagcagcagagtggtgaccagcctcaacctcctgggatggaa 1101 Query: 556 ggacagca 563 || ||||| Sbjct: 1102 ggccagca 1109
>gb|AY104700.1| Zea mays PCO101905 mRNA sequence Length = 1777 Score = 505 bits (255), Expect = e-140 Identities = 506/590 (85%) Strand = Plus / Plus Query: 13 tgcagtttctatgtgcggggtgaatgtaccagnagcgctgagtgcccctatcgccacgag 72 |||||||||| |||||| ||||||||||| || | ||||||||||| ||||| || ||| Sbjct: 613 tgcagtttctttgtgcgaggtgaatgtacaagaggagctgagtgcccttatcgtcatgag 672 Query: 73 atgcctgagacaggggagttatcccagcagaacatcaaagatcgctactatggagttaat 132 |||||||| || ||||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 673 atgcctgaaactggggagttatctcagcagaacattaaagatcgctactatggagttaat 732 Query: 133 gacccagttgctctcaagcttttgggtaaggcaggtgagatgccatctctacaaccacca 192 || |||||||| || || |||||| | |||||||||||||||||||| || ||||||| Sbjct: 733 gatccagttgcactgaaacttttgagcaaggcaggtgagatgccatccctgacaccacca 792 Query: 193 gatgatgagactataaggacactctacattggtggacttgataaccgagtcagtgagcag 252 |||||||||||||||||||| ||||||||||| ||||| |||| | || | | |||||| Sbjct: 793 gatgatgagactataaggaccctctacattggcggactcgatagcagaataaccgagcag 852 Query: 253 gatttgagggatcagttttatgcacatggtgagatcgaatccatcaggatggtaatccag 312 ||||||||||||||||||||||| |||||||||||||| ||||| ||||||||| | || Sbjct: 853 gatttgagggatcagttttatgcccatggtgagatcgagtccataaggatggtacttcaa 912 Query: 313 cgtgcttgtgcatttgtgacgtacacaacaagagaaggtgctgagagagctgcagaggag 372 ||||| |||||||||||||| || ||||||||||| || |||| |||||||| ||| Sbjct: 913 cgtgcaatcgcatttgtgacgtatactacaagagaaggcgcagagaaggctgcagaagag 972 Query: 373 cttgctaacaagctagtcatcaagggtgtgcgcctgaagctcatgtggggcaagccccaa 432 |||||||| ||||||||||||||||| |||||||||||||| |||||||||||||| || Sbjct: 973 cttgctaataagctagtcatcaagggcgtgcgcctgaagctgatgtggggcaagcctcag 1032 Query: 433 gccccaaggccagatgatgacgaggctgggaggcaaggccatgtttcccatggaggatta 492 ||||||| ||| || || || ||| ||||||||| || || |||||||| ||||| | Sbjct: 1033 gccccaaagcctgaggaggatgagtctgggaggctggggcaggtttcccacggagggctg 1092 Query: 493 ctccctagggctgttatatctcagcagcagagcagcgaccagcctcagccacctgggatg 552 |||||||||||||| |||||||||||||||||| | |||||||||||||| || |||||| Sbjct: 1093 ctccctagggctgtcatatctcagcagcagagcggtgaccagcctcagccccccgggatg 1152 Query: 553 gagggacagcaacaagtggcaccaccaggatcaggctacttcaacattcc 602 ||||| || || ||| ||| |||||| ||| ||||||||||||||| Sbjct: 1153 gagggccaacagcaacaggctgcaccagcatcgtactacttcaacattcc 1202
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 434 bits (219), Expect = e-118 Identities = 384/439 (87%) Strand = Plus / Minus Query: 125 gagttaatgacccagttgctctcaagcttttgggtaaggcaggtgagatgccatctctac 184 ||||||| || ||||||||| | ||||||||| ||||||| |||||||||||||| || Sbjct: 10711885 gagttaacgatccagttgctttgaagcttttgagtaaggctggtgagatgccatccctga 10711826 Query: 185 aaccaccagatgatgagactataaggacactctacattggtggacttgataaccgagtca 244 ||| ||||||||||||| |||||||||||| ||||||||||| ||||||| ||||||| Sbjct: 10711825 cacccccagatgatgagagtataaggacactttacattggtggccttgatagtcgagtca 10711766 Query: 245 gtgagcaggatttgagggatcagttttatgcacatggtgagatcgaatccatcaggatgg 304 ||||||||||||||||||||| |||||||| ||||||||||| || |||| || |||| Sbjct: 10711765 ctgagcaggatttgagggatcaattttatgcccatggtgagattgagaccataagaatgg 10711706 Query: 305 taatccagcgtgcttgtgcatttgtgacgtacacaacaagagaaggtgctgagagagctg 364 | | ||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||| Sbjct: 10711705 ttctgcagcgtgcttgtgcatttgtgacttacactacaagagaaggtgctgagaaagctg 10711646 Query: 365 cagaggagcttgctaacaagctagtcatcaagggtgtgcgcctgaagctcatgtggggca 424 |||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||| Sbjct: 10711645 cagaggagctcgctaacaagttagtcatcaagggtgtgcgtctgaagctcatgtggggca 10711586 Query: 425 agccccaagccccaaggccagatgatgacgaggctgggaggcaaggccatgtttcccatg 484 |||| ||||| |||| || || || || || |||||||||||||| |||||| | |||| Sbjct: 10711585 agcctcaagcaccaaaaccggaggaagatgaagctgggaggcaagggcatgttgcacatg 10711526 Query: 485 gaggattactccctagggctgttatatctcagcagcagagcagcgaccagcctcagccac 544 ||||| | |||||||||||||| ||||||||||||||||| | ||||||||||| || | Sbjct: 10711525 gaggaatgctccctagggctgtaatatctcagcagcagagtggtgaccagcctcaacctc 10711466 Query: 545 ctgggatggagggacagca 563 |||||||||| || ||||| Sbjct: 10711465 ctgggatggaaggccagca 10711447 Score = 103 bits (52), Expect = 7e-19 Identities = 93/107 (86%) Strand = Plus / Minus Query: 16 agtttctatgtgcggggtgaatgtaccagnagcgctgagtgcccctatcgccacgagatg 75 |||||||||||||| ||||||||||| || | ||||| ||||| ||||| || |||||| Sbjct: 10713712 agtttctatgtgcgtggtgaatgtacaagaggtgctgaatgcccttatcgacatgagatg 10713653 Query: 76 cctgagacaggggagttatcccagcagaacatcaaagatcgctacta 122 ||||| || || |||||||| |||||||||||||||||||| ||||| Sbjct: 10713652 cctgaaactggagagttatctcagcagaacatcaaagatcgttacta 10713606
>dbj|AP005260.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0557D09 Length = 135315 Score = 434 bits (219), Expect = e-118 Identities = 384/439 (87%) Strand = Plus / Minus Query: 125 gagttaatgacccagttgctctcaagcttttgggtaaggcaggtgagatgccatctctac 184 ||||||| || ||||||||| | ||||||||| ||||||| |||||||||||||| || Sbjct: 41331 gagttaacgatccagttgctttgaagcttttgagtaaggctggtgagatgccatccctga 41272 Query: 185 aaccaccagatgatgagactataaggacactctacattggtggacttgataaccgagtca 244 ||| ||||||||||||| |||||||||||| ||||||||||| ||||||| ||||||| Sbjct: 41271 cacccccagatgatgagagtataaggacactttacattggtggccttgatagtcgagtca 41212 Query: 245 gtgagcaggatttgagggatcagttttatgcacatggtgagatcgaatccatcaggatgg 304 ||||||||||||||||||||| |||||||| ||||||||||| || |||| || |||| Sbjct: 41211 ctgagcaggatttgagggatcaattttatgcccatggtgagattgagaccataagaatgg 41152 Query: 305 taatccagcgtgcttgtgcatttgtgacgtacacaacaagagaaggtgctgagagagctg 364 | | ||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||| Sbjct: 41151 ttctgcagcgtgcttgtgcatttgtgacttacactacaagagaaggtgctgagaaagctg 41092 Query: 365 cagaggagcttgctaacaagctagtcatcaagggtgtgcgcctgaagctcatgtggggca 424 |||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||| Sbjct: 41091 cagaggagctcgctaacaagttagtcatcaagggtgtgcgtctgaagctcatgtggggca 41032 Query: 425 agccccaagccccaaggccagatgatgacgaggctgggaggcaaggccatgtttcccatg 484 |||| ||||| |||| || || || || || |||||||||||||| |||||| | |||| Sbjct: 41031 agcctcaagcaccaaaaccggaggaagatgaagctgggaggcaagggcatgttgcacatg 40972 Query: 485 gaggattactccctagggctgttatatctcagcagcagagcagcgaccagcctcagccac 544 ||||| | |||||||||||||| ||||||||||||||||| | ||||||||||| || | Sbjct: 40971 gaggaatgctccctagggctgtaatatctcagcagcagagtggtgaccagcctcaacctc 40912 Query: 545 ctgggatggagggacagca 563 |||||||||| || ||||| Sbjct: 40911 ctgggatggaaggccagca 40893 Score = 103 bits (52), Expect = 7e-19 Identities = 93/107 (86%) Strand = Plus / Minus Query: 16 agtttctatgtgcggggtgaatgtaccagnagcgctgagtgcccctatcgccacgagatg 75 |||||||||||||| ||||||||||| || | ||||| ||||| ||||| || |||||| Sbjct: 43158 agtttctatgtgcgtggtgaatgtacaagaggtgctgaatgcccttatcgacatgagatg 43099 Query: 76 cctgagacaggggagttatcccagcagaacatcaaagatcgctacta 122 ||||| || || |||||||| |||||||||||||||||||| ||||| Sbjct: 43098 cctgaaactggagagttatctcagcagaacatcaaagatcgttacta 43052
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 428 bits (216), Expect = e-117 Identities = 413/478 (86%), Gaps = 3/478 (0%) Strand = Plus / Minus Query: 125 gagttaatgacccagttgctctcaagcttttgggtaaggcaggtgagatgccatctctac 184 |||||||||| ||||||||| | || |||||||||||||| |||||||||||||| || Sbjct: 3537057 gagttaatgatccagttgctttgaaacttttgggtaaggccggtgagatgccatccctga 3536998 Query: 185 aaccaccagatgatgagactataaggacactctacattggtggacttgataaccgagtca 244 ||| ||||| ||||||| |||||||||||| ||||||||||| ||| |||| ||| ||| Sbjct: 3536997 cacctccagacgatgagagtataaggacactttacattggtggccttaataatcgaatca 3536938 Query: 245 gtgagcaggatttgagggatcagttttatgcacatggtgagatcgaatccatcaggatgg 304 |||||||||||||||||||| ||||| ||||||||||| || || ||||| ||||||| Sbjct: 3536937 ccgagcaggatttgagggatcaattttacgcacatggtgaaattgagtccataaggatgg 3536878 Query: 305 taatccagcgtgcttgtgcatttgtgacgtacacaacaagagaaggtgctgagagagctg 364 | | || ||||| |||||||||||||||||||| ||||||||||||||||||| ||||| Sbjct: 3536877 ttctgcaacgtgcctgtgcatttgtgacgtacactacaagagaaggtgctgagaaagctg 3536818 Query: 365 cagaggagcttgctaacaagctagtcatcaagggtgtgcgcctgaagctcatgtggggca 424 ||||||||||||| |||||| |||||||||||||| | |||||||||||||||||||| | Sbjct: 3536817 cagaggagcttgccaacaagttagtcatcaagggtatacgcctgaagctcatgtggggta 3536758 Query: 425 agccccaagccccaaggccagatgatgacgaggctgggaggcaaggccatgtttcccatg 484 |||| ||||| |||| |||||| || || || ||||| |||||||| |||||| | |||| Sbjct: 3536757 agcctcaagcaccaaagccagaagacgatgaagctggaaggcaagggcatgttgcacatg 3536698 Query: 485 gaggattactccctagggctgttatatctcagcagcagagcagcgaccagcctcagccac 544 ||||| | ||||| |||||||||||||||||||||||||| | ||||||||||| |||| Sbjct: 3536697 gaggaatgctccccagggctgttatatctcagcagcagagtggtgaccagcctcaaccac 3536638 Query: 545 ctgggatggagggacagcaacaagtggcaccaccaggatcaggctacttcaacattcc 602 |||| ||||||||||| || ||| |||||| | |||||| ||||||||||||||| Sbjct: 3536637 ctggaatggagggacaacagcaa---gcaccatcgggatcatactacttcaacattcc 3536583 Score = 107 bits (54), Expect = 4e-20 Identities = 98/113 (86%) Strand = Plus / Minus Query: 13 tgcagtttctatgtgcggggtgaatgtaccagnagcgctgagtgcccctatcgccacgag 72 ||||||||||||||||| ||||||||||| || | ||||| ||||| ||||| || ||| Sbjct: 3537715 tgcagtttctatgtgcgtggtgaatgtacaagaggtgctgaatgcccttatcgacatgag 3537656 Query: 73 atgcctgagacaggggagttatcccagcagaacatcaaagatcgctactatgg 125 |||||||| || || |||||||| ||||||||||| |||||||| |||||||| Sbjct: 3537655 atgcctgaaactggagagttatctcagcagaacattaaagatcgttactatgg 3537603
>dbj|AP002071.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0675A05 Length = 131972 Score = 428 bits (216), Expect = e-117 Identities = 413/478 (86%), Gaps = 3/478 (0%) Strand = Plus / Minus Query: 125 gagttaatgacccagttgctctcaagcttttgggtaaggcaggtgagatgccatctctac 184 |||||||||| ||||||||| | || |||||||||||||| |||||||||||||| || Sbjct: 28894 gagttaatgatccagttgctttgaaacttttgggtaaggccggtgagatgccatccctga 28835 Query: 185 aaccaccagatgatgagactataaggacactctacattggtggacttgataaccgagtca 244 ||| ||||| ||||||| |||||||||||| ||||||||||| ||| |||| ||| ||| Sbjct: 28834 cacctccagacgatgagagtataaggacactttacattggtggccttaataatcgaatca 28775 Query: 245 gtgagcaggatttgagggatcagttttatgcacatggtgagatcgaatccatcaggatgg 304 |||||||||||||||||||| ||||| ||||||||||| || || ||||| ||||||| Sbjct: 28774 ccgagcaggatttgagggatcaattttacgcacatggtgaaattgagtccataaggatgg 28715 Query: 305 taatccagcgtgcttgtgcatttgtgacgtacacaacaagagaaggtgctgagagagctg 364 | | || ||||| |||||||||||||||||||| ||||||||||||||||||| ||||| Sbjct: 28714 ttctgcaacgtgcctgtgcatttgtgacgtacactacaagagaaggtgctgagaaagctg 28655 Query: 365 cagaggagcttgctaacaagctagtcatcaagggtgtgcgcctgaagctcatgtggggca 424 ||||||||||||| |||||| |||||||||||||| | |||||||||||||||||||| | Sbjct: 28654 cagaggagcttgccaacaagttagtcatcaagggtatacgcctgaagctcatgtggggta 28595 Query: 425 agccccaagccccaaggccagatgatgacgaggctgggaggcaaggccatgtttcccatg 484 |||| ||||| |||| |||||| || || || ||||| |||||||| |||||| | |||| Sbjct: 28594 agcctcaagcaccaaagccagaagacgatgaagctggaaggcaagggcatgttgcacatg 28535 Query: 485 gaggattactccctagggctgttatatctcagcagcagagcagcgaccagcctcagccac 544 ||||| | ||||| |||||||||||||||||||||||||| | ||||||||||| |||| Sbjct: 28534 gaggaatgctccccagggctgttatatctcagcagcagagtggtgaccagcctcaaccac 28475 Query: 545 ctgggatggagggacagcaacaagtggcaccaccaggatcaggctacttcaacattcc 602 |||| ||||||||||| || ||| |||||| | |||||| ||||||||||||||| Sbjct: 28474 ctggaatggagggacaacagcaa---gcaccatcgggatcatactacttcaacattcc 28420 Score = 107 bits (54), Expect = 4e-20 Identities = 98/113 (86%) Strand = Plus / Minus Query: 13 tgcagtttctatgtgcggggtgaatgtaccagnagcgctgagtgcccctatcgccacgag 72 ||||||||||||||||| ||||||||||| || | ||||| ||||| ||||| || ||| Sbjct: 29552 tgcagtttctatgtgcgtggtgaatgtacaagaggtgctgaatgcccttatcgacatgag 29493 Query: 73 atgcctgagacaggggagttatcccagcagaacatcaaagatcgctactatgg 125 |||||||| || || |||||||| ||||||||||| |||||||| |||||||| Sbjct: 29492 atgcctgaaactggagagttatctcagcagaacattaaagatcgttactatgg 29440
>gb|DQ268862.1| Solanum tuberosum clone 183E08 RRM-containing RNA-binding protein-like protein mRNA, complete cds Length = 1679 Score = 81.8 bits (41), Expect = 2e-12 Identities = 128/157 (81%) Strand = Plus / Plus Query: 242 tcagtgagcaggatttgagggatcagttttatgcacatggtgagatcgaatccatcagga 301 ||||||||||||| | ||||| ||||||||||||||||| || ||||| ||||| | | Sbjct: 799 tcagtgagcaggacctaagggaccagttttatgcacatggagaaatcgagtccattaaaa 858 Query: 302 tggtaatccagcgtgcttgtgcatttgtgacgtacacaacaagagaaggtgctgagagag 361 |||| | ||||||| |||||| ||||| || ||||| |||||||||||||| | || | Sbjct: 859 tggtgttgcagcgtggttgtgcttttgtaacctacactacaagagaaggtgcagtgaagg 918 Query: 362 ctgcagaggagcttgctaacaagctagtcatcaaggg 398 | || ||||| || || ||||||||||| || ||||| Sbjct: 919 cggctgaggaactagcgaacaagctagtgataaaggg 955 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 52 gagtgcccctatcgccacgagatgcctgagacaggggagttatcccagcagaacatcaaa 111 |||||||| ||| | ||||| ||||| ||||| |||||||| || ||||| ||||| || Sbjct: 609 gagtgcccttataggcacgaaatgccagagactggggagttgtcacagcaaaacattaag 668 Query: 112 gatcgctactatggagttaatga 134 || || ||||||||||||||||| Sbjct: 669 gaccgttactatggagttaatga 691
>gb|DQ294268.1| Solanum tuberosum clone 138G04 RRM-containing RNA-binding protein-like protein mRNA, complete cds Length = 1747 Score = 73.8 bits (37), Expect = 6e-10 Identities = 127/157 (80%) Strand = Plus / Plus Query: 242 tcagtgagcaggatttgagggatcagttttatgcacatggtgagatcgaatccatcagga 301 ||||||||||||| | ||||| |||||||| |||||||| || ||||| ||||| | | Sbjct: 820 tcagtgagcaggacctaagggaccagttttacgcacatggagaaatcgagtccattaaaa 879 Query: 302 tggtaatccagcgtgcttgtgcatttgtgacgtacacaacaagagaaggtgctgagagag 361 |||| | ||||||| |||||| ||||| || ||||| |||||||||||||| | || | Sbjct: 880 tggtgttgcagcgtggttgtgcttttgtaacctacactacaagagaaggtgcagtgaagg 939 Query: 362 ctgcagaggagcttgctaacaagctagtcatcaaggg 398 | || ||||| || || ||||||||||| || ||||| Sbjct: 940 cggctgaggaactagcgaacaagctagtgataaaggg 976 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 52 gagtgcccctatcgccacgagatgcctgagacaggggagttatcccagcagaacatcaaa 111 |||||||| ||| | ||||| ||||| ||||| |||||||| || ||||| ||||| || Sbjct: 630 gagtgcccttataggcacgaaatgccagagactggggagttgtcacagcaaaacattaag 689 Query: 112 gatcgctactatggagttaatga 134 || || ||||||||||||||||| Sbjct: 690 gaccgttactatggagttaatga 712
>ref|NM_128511.1| Arabidopsis thaliana RNA binding / nucleic acid binding AT2G29580 mRNA, complete cds Length = 1718 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 70 gagatgcctgagacaggggagttatcccagcagaacatcaaagatcgctactatggagtt 129 ||||||||||| ||||| |||||||||||||||||||| ||||| || || ||||| || Sbjct: 632 gagatgcctgaaacaggagagttatcccagcagaacattaaagaccgttattatggtgta 691 Query: 130 aatgacccagttgc 143 || || |||||||| Sbjct: 692 aacgatccagttgc 705
>gb|AF428354.1|AF428354 Arabidopsis thaliana At2g29580/F16P2.4 mRNA, complete cds Length = 1718 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 70 gagatgcctgagacaggggagttatcccagcagaacatcaaagatcgctactatggagtt 129 ||||||||||| ||||| |||||||||||||||||||| ||||| || || ||||| || Sbjct: 632 gagatgcctgaaacaggagagttatcccagcagaacattaaagaccgttattatggtgta 691 Query: 130 aatgacccagttgc 143 || || |||||||| Sbjct: 692 aacgatccagttgc 705
>gb|BT002621.1| Arabidopsis thaliana At2g29580/F16P2.4 gene, complete cds Length = 1452 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 70 gagatgcctgagacaggggagttatcccagcagaacatcaaagatcgctactatggagtt 129 ||||||||||| ||||| |||||||||||||||||||| ||||| || || ||||| || Sbjct: 544 gagatgcctgaaacaggagagttatcccagcagaacattaaagaccgttattatggtgta 603 Query: 130 aatgacccagttgc 143 || || |||||||| Sbjct: 604 aacgatccagttgc 617
>gb|BT014496.1| Lycopersicon esculentum clone 133866F, mRNA sequence Length = 1903 Score = 65.9 bits (33), Expect = 1e-07 Identities = 114/141 (80%) Strand = Plus / Plus Query: 246 tgagcaggatttgagggatcagttttatgcacatggtgagatcgaatccatcaggatggt 305 ||||||||| | ||||| || ||||||||||||||||| || || ||||| | ||||| Sbjct: 911 tgagcaggaccttagggaccatttttatgcacatggtgaaattgagtccattaaaatggt 970 Query: 306 aatccagcgtgcttgtgcatttgtgacgtacacaacaagagaaggtgctgagagagctgc 365 ||||||||| |||||| ||||| || ||||| || ||||||||||| | || || || Sbjct: 971 ggtccagcgtggttgtgcttttgtaacttacacgactagagaaggtgcggtgaaggcagc 1030 Query: 366 agaggagcttgctaacaagct 386 ||||| ||||| |||||||| Sbjct: 1031 tgaggaacttgcaaacaagct 1051 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 70 gagatgcctgagacaggggagttatcccagcagaacatcaaagatcgctactatggagtt 129 ||||||||||| |||||||| || || ||||| || |||||||| || ||||||||||| Sbjct: 735 gagatgcctgaaacaggggaattgtcacagcaaaatatcaaagaccgttactatggagtc 794 Query: 130 aatgacccagt 140 ||||| ||||| Sbjct: 795 aatgatccagt 805
>gb|AC004561.3| Arabidopsis thaliana chromosome 2 clone F16P2 map ve014, complete sequence Length = 131743 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 70 gagatgcctgagacaggggagttatcccagcagaacatcaaaga 113 ||||||||||| ||||| |||||||||||||||||||| ||||| Sbjct: 6669 gagatgcctgaaacaggagagttatcccagcagaacattaaaga 6626
>ref|XM_385593.1| Gibberella zeae PH-1 chromosome 3 conserved hypothetical protein (FG05417.1) partial mRNA Length = 1422 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 212 cactctacattggtggacttga 233 |||||||||||||||||||||| Sbjct: 248 cactctacattggtggacttga 269
>gb|AC073278.9| Homo sapiens BAC clone RP11-661L8 from 7, complete sequence Length = 200807 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 166 ggtgagatgccatctctacaac 187 |||||||||||||||||||||| Sbjct: 176697 ggtgagatgccatctctacaac 176718
>gb|AC008676.6| Homo sapiens chromosome 5 clone CTB-47B11, complete sequence Length = 208065 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 342 aagagaaggtgctgagagagct 363 |||||||||||||||||||||| Sbjct: 64916 aagagaaggtgctgagagagct 64937
>gb|AC005096.4| Homo sapiens BAC clone CTA-339C12 from 7, complete sequence Length = 185376 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 166 ggtgagatgccatctctacaa 186 ||||||||||||||||||||| Sbjct: 158035 ggtgagatgccatctctacaa 158015
>gb|AC007610.10| Homo sapiens chromosome 16 clone RP11-429P3, complete sequence Length = 214786 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 166 ggtgagatgccatctctacaa 186 ||||||||||||||||||||| Sbjct: 131690 ggtgagatgccatctctacaa 131710
>gb|AC112651.4| Homo sapiens X BAC RP13-302M16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 159274 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 166 ggtgagatgccatctctacaa 186 ||||||||||||||||||||| Sbjct: 56665 ggtgagatgccatctctacaa 56645
>gb|AC022394.7| Homo sapiens chromosome 10 clone RP11-325M24, complete sequence Length = 154064 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 166 ggtgagatgccatctctacaa 186 ||||||||||||||||||||| Sbjct: 9059 ggtgagatgccatctctacaa 9079
>gb|AC106775.3| Homo sapiens chromosome 5 clone RP11-322K12, complete sequence Length = 137586 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 166 ggtgagatgccatctctacaa 186 ||||||||||||||||||||| Sbjct: 68232 ggtgagatgccatctctacaa 68212
>gb|AC150910.4| Pan troglodytes BAC clone CH251-484K21 from chromosome 7, complete sequence Length = 164629 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 166 ggtgagatgccatctctacaa 186 ||||||||||||||||||||| Sbjct: 164190 ggtgagatgccatctctacaa 164170
>gb|AC092579.3| Homo sapiens BAC clone RP11-15K19 from 7, complete sequence Length = 118958 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 166 ggtgagatgccatctctacaa 186 ||||||||||||||||||||| Sbjct: 61781 ggtgagatgccatctctacaa 61761
>gb|AC004166.12| Homo sapiens Chromosome 7 BAC Clone 239c10, complete sequence Length = 275197 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 166 ggtgagatgccatctctacaa 186 ||||||||||||||||||||| Sbjct: 121071 ggtgagatgccatctctacaa 121051
>gb|AC079176.15| Homo sapiens X BAC RP11-325D5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 186278 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 166 ggtgagatgccatctctacaa 186 ||||||||||||||||||||| Sbjct: 86962 ggtgagatgccatctctacaa 86942
>gb|AC013726.7| Homo sapiens BAC clone RP11-400N9 from 2, complete sequence Length = 214647 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 166 ggtgagatgccatctctacaa 186 ||||||||||||||||||||| Sbjct: 45828 ggtgagatgccatctctacaa 45848
>gb|AC005098.2|AC005098 Homo sapiens BAC clone CTA-350L10 from 7q11.2, complete sequence Length = 230552 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 166 ggtgagatgccatctctacaa 186 ||||||||||||||||||||| Sbjct: 132918 ggtgagatgccatctctacaa 132898
>gb|AC004867.5|AC004867 Homo sapiens PAC clone RP4-728P19 from 7, complete sequence Length = 143737 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 166 ggtgagatgccatctctacaa 186 ||||||||||||||||||||| Sbjct: 108771 ggtgagatgccatctctacaa 108791
>gb|AC124781.4| Homo sapiens BAC clone RP11-219M8 from 7, complete sequence Length = 192653 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 166 ggtgagatgccatctctacaa 186 ||||||||||||||||||||| Sbjct: 77829 ggtgagatgccatctctacaa 77849
>gb|AC004021.1|AC004021 Human PAC clone RP1-186K10 from 5q31, complete sequence Length = 171370 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 166 ggtgagatgccatctctacaa 186 ||||||||||||||||||||| Sbjct: 63316 ggtgagatgccatctctacaa 63336
>emb|AL132800.4|CNS01DTM Human chromosome 14 DNA sequence BAC R-80A15 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 185251 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 166 ggtgagatgccatctctacaa 186 ||||||||||||||||||||| Sbjct: 90029 ggtgagatgccatctctacaa 90049
>gb|AC122871.4| Mus musculus BAC clone RP23-107P12 from 5, complete sequence Length = 213939 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 420 gggcaagccccaagccccaag 440 ||||||||||||||||||||| Sbjct: 149712 gggcaagccccaagccccaag 149732
>emb|AL133168.6|CNS01DU7 Human chromosome 14 DNA sequence BAC R-187K17 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 195115 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 166 ggtgagatgccatctctacaa 186 ||||||||||||||||||||| Sbjct: 36291 ggtgagatgccatctctacaa 36271
>ref|XM_513800.1| PREDICTED: Pan troglodytes LOC457298 (LOC457298), mRNA Length = 3063 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 356 agagagctgcagaggagcttgcta 379 ||||||||||||||| |||||||| Sbjct: 2578 agagagctgcagaggcgcttgcta 2601
>gb|AC166370.3| Mus musculus BAC clone RP23-20I24 from chromosome 9, complete sequence Length = 242229 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 532 cagcctcagccacctgggat 551 |||||||||||||||||||| Sbjct: 224865 cagcctcagccacctgggat 224884
>gb|AC155074.12| Mus musculus chromosome 15, clone RP24-127H11, complete sequence Length = 184795 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 caagccccaaggccagatga 449 |||||||||||||||||||| Sbjct: 106254 caagccccaaggccagatga 106273
>gb|AC132371.2| Mus musculus BAC clone RP23-477D20 from chromosome 5, complete sequence Length = 193291 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 aagagaaggtgctgagagag 361 |||||||||||||||||||| Sbjct: 95422 aagagaaggtgctgagagag 95441
>gb|AC116552.2| Homo sapiens chromosome 16 clone RP11-21B21, complete sequence Length = 176797 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 120134 gtgagatgccatctctacaa 120153
>ref|XM_568981.1| Cryptococcus neoformans var. neoformans JEC21 cytoplasm protein (CNB04890) partial mRNA Length = 3730 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 246 tgagcaggatttgagggatcagtt 269 |||||||||||||||| ||||||| Sbjct: 1678 tgagcaggatttgaggaatcagtt 1701
>gb|AC107755.12| Mus musculus chromosome 9, clone RP23-225C11, complete sequence Length = 178844 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 532 cagcctcagccacctgggat 551 |||||||||||||||||||| Sbjct: 29900 cagcctcagccacctgggat 29919
>gb|AC091754.4| Papio anubis clone RP41-384C24, complete sequence Length = 192273 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 797 gtgagatgccatctctacaa 778
>emb|CR956383.8| Pig DNA sequence from clone CH242-271L5 on chromosome 17, complete sequence Length = 163007 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 532 cagcctcagccacctgggat 551 |||||||||||||||||||| Sbjct: 33713 cagcctcagccacctgggat 33732
>gb|AC148447.3| Pan troglodytes chromosome X clone RP43-041A20 map human ortholog p11.3, complete sequence Length = 210474 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 79096 gtgagatgccatctctacaa 79077
>gb|AY123429.1|AY123426S04 Papio anubis anubis neurofibromatosis type 2 region, section 4; and merlin (NF2) gene, exons 2 through 16 and complete cds Length = 100801 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 61325 gtgagatgccatctctacaa 61306
>emb|AL163301.2|HS21C101 Homo sapiens chromosome 21 segment HS21C101 Length = 340000 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 280231 gtgagatgccatctctacaa 280212
>emb|AL163249.2|HS21C049 Homo sapiens chromosome 21 segment HS21C049 Length = 340000 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 156801 gtgagatgccatctctacaa 156782
>emb|Z83856.2|HSN113A11 Human DNA sequence from clone LL22NC03-113A11 on chromosome 22 Contains the 3' end of the DEPDC5 gene for DEP domain containing 5, complete sequence Length = 22634 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 3114 gtgagatgccatctctacaa 3133
>emb|BX247885.11| Human DNA sequence from clone RP4-669P10 on chromosome 22q13.31-13.33, complete sequence Length = 133246 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 73014 gtgagatgccatctctacaa 72995
>emb|AL590365.14| Human DNA sequence from clone RP11-455B2 on chromosome 10 Contains the gene for a novel thioesterase domain containing protein (FLJ11106), the gene for ribonuclease P (38kD) (RPP38), the gene for a novel protein (FLJ38219), the gene for a novel protein, the NMT2 gene for N-myristoyltransferase 2, the 3' end of the gene for a novel protein (LOC221061), a novel gene, a pseudogene similar to part of glyceraldehyde-3-phosphate dehydrogenase (GAPD)(G3PD,GAPDH), a peptidylprolyl isomerase A (cyclophilin A) (PPIA)(CYPA,CYPH) pseudogene, a NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa (NDUFA4)(MLRQ) pseudogene and three CpG islands, complete sequence Length = 194802 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 185391 gtgagatgccatctctacaa 185410
>emb|AL512412.7| Human DNA sequence from clone RP11-49H10 on chromosome 1 Contains the 3' end of the SMYD3 gene for SET and MYND domain containing 3 and a CpG island, complete sequence Length = 85198 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 46893 gtgagatgccatctctacaa 46912
>emb|AL513016.5| Human DNA sequence from clone RP11-474O21 on chromosome 1 Contains the 5' end of the gene for short-chain dehydrogenase/reductase 1 (SDR1), two genes for novel proteins similar to esterases, a ribosomal protein L23a (RPL23A) pseudogene, the gene for a novel protein (MGC35194) and a CpG island, complete sequence Length = 150720 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 83762 gtgagatgccatctctacaa 83743
>emb|AL442064.10| Human DNA sequence from clone RP11-272D1 on chromosome 9 Contains the 3' end of the EDG2 gene for endothelial differentiation, lysophosphatidic acid G-protein-coupled receptor, 2, complete sequence Length = 169905 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 106524 gtgagatgccatctctacaa 106543
>emb|AL449223.7| Human DNA sequence from clone RP11-74N20 on chromosome 1 Contains the 5' end of the NMNAT2 gene for nicotinamide nucleotide adenylyltransferase 2, a novel transcript, the 5' end of the C1orf16 gene for chromosome 1 open reading frame 16 and a CpG island, complete sequence Length = 171467 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 42192 gtgagatgccatctctacaa 42211
>emb|AL360227.17| Human DNA sequence from clone RP11-428F8 on chromosome 6 Contains the SLC16A10 gene for solute carrier family 16 (monocarboxylic acid transporters) member 10, the 3' part of a novel gene and a CpG island, complete sequence Length = 161938 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 112863 gtgagatgccatctctacaa 112882
>gb|AF129075.3| Homo sapiens chromosome 21 clone RP1-100J12, Rp1-P79E4 map q21.3-22.11, complete sequence Length = 190837 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 156642 gtgagatgccatctctacaa 156623
>emb|AL358234.14| Human DNA sequence from clone RP11-164A7 on chromosome 10 Contains the 5' end of the WAC gene for WW domain-containing adapter with a coiled-coil region (PRO1741, FLJ31290, KIAA1844, MGC10753), the 5' end of a novel gene and a CpG island, complete sequence Length = 103930 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 15150 gtgagatgccatctctacaa 15131
>emb|AL139097.16| Human DNA sequence from clone RP1-125E8 on chromosome 6, complete sequence Length = 112533 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 68284 gtgagatgccatctctacaa 68303
>emb|AL138887.13| Human DNA sequence from clone RP3-383A10 on chromosome 6, complete sequence Length = 29927 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 12354 gtgagatgccatctctacaa 12335
>gb|AC084251.13| Homo sapiens chromosome 8, clone RP11-152C15, complete sequence Length = 181400 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 50308 gtgagatgccatctctacaa 50289
>emb|AL121891.22|HS1187M17 Human DNA sequence from clone RP5-1187M17 on chromosome 20 Contains the 5' end of the AVP gene for arginine vasopressin (neurophysin II), the gene KIAA0860 for a likely ortholog of mouse ubiquitin conjugating enzyme a novel gene 7 interacting protein 5, a novel gene (FLJ3149), a novel gene (KIAA0552), the C20orf116 gene, the 5' end of the ITPA gene for inosine triphosphatase (nucleoside triphosphate pyrophosphatase), a novel transcript and nine CpG islands, complete sequence Length = 125856 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 45155 gtgagatgccatctctacaa 45174
>emb|AL133264.10| Human DNA sequence from clone RP3-369A17 on chromosome 6p22.1-22.3 Contains the 5' end of gene FLJ12619 (DKFZP564G182), a sigma 1 subunit adaptor-related protein complex 3 (AP3S1) (CLAPS3,Sigma3A) pseudogene and gene geminin (LOC51053). Contains 3 CpG islands, complete sequence Length = 83820 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 27338 gtgagatgccatctctacaa 27357
>emb|AL049610.9|HS1055C14 Human DNA sequence from clone RP5-1055C14 on chromosome Xq22.1-22.3 Contains the TCEAL1 gene for transcription elongation factor A (SII)-like 1, a novel gene, a novel pseudogene (LOC139779), the MORF4L2 gene for mortality factor 4 like 2, a novel gene, the 3' end of a gene for the possible ortholog of mouse glycine receptor alpha 4 subunit (GLRA4) and a novel gene (MGC39655), complete sequence Length = 100269 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 16344 gtgagatgccatctctacaa 16363
>emb|AL031667.21|HS620E11 Human DNA sequence from clone RP4-620E11 on chromosome 20q11.2-12 Contains the 3' end of the LPIN3 gene for lipin 3, the C20orf130 gene, a novel pseudogene, the 3' end of the CHD6 gene for chromodomain helicase DNA binding protein 6, a lymphocyte antigen 6 complex locus H (LY6H) pseudogene and a CpG island, complete sequence Length = 142520 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 ggggcaagccccaagcccca 438 |||||||||||||||||||| Sbjct: 5892 ggggcaagccccaagcccca 5873
>emb|AL035653.12|HS67E13 Human DNA sequence from clone RP1-67E13 on chromosome 6p24.3-25.3 Contains a novel pseudogene, part of a novel gene and CpG islands, complete sequence Length = 133765 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 24774 gtgagatgccatctctacaa 24755
>emb|AL034370.1|HSA218J18 Human DNA sequence from clone RP6-218J18 on chromosome Xp11.3-11.4 Contains the NDP gene for norrie disease (pseudoglioma), a RNA-binding region (RNP1, RRM) containing 2 (RNPC2) pseudogene, a novel gene and a CpG island, complete sequence Length = 119945 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 7934 gtgagatgccatctctacaa 7915
>emb|AL021878.2|HS257I20 Human DNA sequence from clone RP1-257I20 on chromosome 22q13.1-13.2 Contains the 3' end of a novel gene, CYP2D7AP and CYP2D8P (cytochrome P450) pseudogenes,part of the TCF20 gene for transcription factor 20 (AR1, KIAA0292), the NDUFA6 gene for NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 6, a pseudogene similar to GTP-binding protein genes, ESTs, STSs, GSSs and a ca repeat polymorphism, complete sequence Length = 114846 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 99414 gtgagatgccatctctacaa 99395
>gb|AC063922.23| Homo sapiens 3 BAC RP11-315A15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 97817 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 53980 gtgagatgccatctctacaa 53999
>gb|AC090574.6| Homo sapiens chromosome 8, clone RP11-449M6, complete sequence Length = 172969 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 52245 gtgagatgccatctctacaa 52264
>gb|AC104024.8| Homo sapiens chromosome 17, clone RP11-416I2, complete sequence Length = 97645 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 ctgagagagctgcagaggag 372 |||||||||||||||||||| Sbjct: 2926 ctgagagagctgcagaggag 2945
>emb|CR855878.5| Human DNA sequence from clone RP13-469P20 on chromosome 1, complete sequence Length = 225410 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 83789 gtgagatgccatctctacaa 83770
>gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 2, complete sequence Length = 1632307 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 246 tgagcaggatttgagggatcagtt 269 |||||||||||||||| ||||||| Sbjct: 1392647 tgagcaggatttgaggaatcagtt 1392670
>gb|AC116157.4| Homo sapiens chromosome 15, clone RP11-1006B19, complete sequence Length = 217659 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 29570 gtgagatgccatctctacaa 29589
>gb|AC104046.2| Homo sapiens chromosome 15, clone CTD-2262B20, complete sequence Length = 104794 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 82159 gtgagatgccatctctacaa 82178
>gb|AC079111.7| Homo sapiens chromosome 17, clone RP11-367G9, complete sequence Length = 163410 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 ctgagagagctgcagaggag 372 |||||||||||||||||||| Sbjct: 30463 ctgagagagctgcagaggag 30444
>gb|AC011448.5| Homo sapiens chromosome 19 clone CTC-260F20, complete sequence Length = 165122 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 138911 gtgagatgccatctctacaa 138892
>gb|AC105179.6| Homo sapiens chromosome 11, clone RP11-124M12, complete sequence Length = 171683 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 132700 gtgagatgccatctctacaa 132681
>gb|AC171138.2| Helobdella robusta clone CH306-1A9, complete sequence Length = 97729 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 553 gagggacagcaacaagtggc 572 |||||||||||||||||||| Sbjct: 91737 gagggacagcaacaagtggc 91756
>dbj|AK124130.1| Homo sapiens cDNA FLJ42136 fis, clone TESTI2035997 Length = 2089 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 744 gtgagatgccatctctacaa 725
>gb|AC110611.3| Homo sapiens BAC clone RP11-345F18 from 4, complete sequence Length = 195155 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 190315 gtgagatgccatctctacaa 190334
>gb|AC069444.17| Homo sapiens 3 BAC RP11-169N13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 165093 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 101400 gtgagatgccatctctacaa 101419
>gb|AC026975.5| Homo sapiens chromosome 11, clone RP11-709C9, complete sequence Length = 200105 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 144180 gtgagatgccatctctacaa 144199
>gb|AF364606.1| Homo sapiens orphan nuclear receptors (NR1I2) gene, complete cds, alternatively spliced Length = 86081 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 52455 gtgagatgccatctctacaa 52436
>dbj|AB226463.1| Aspergillus oryzae cDNA, contig sequence: AoEST3325 Length = 810 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ttcggcacgaggtgcagttt 20 |||||||||||||||||||| Sbjct: 3 ttcggcacgaggtgcagttt 22
>gb|AC022021.10| Homo sapiens chromosome 10 clone RP11-351M16, complete sequence Length = 190202 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 19865 gtgagatgccatctctacaa 19884
>gb|AC116333.2| Homo sapiens chromosome 5 clone CTD-2242E19, complete sequence Length = 112119 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 96487 gtgagatgccatctctacaa 96506
>ref|NM_135788.2| Drosophila melanogaster CG6116-RA (CG6116), mRNA Length = 2512 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 329 tgacgtacacaacaagagaa 348 |||||||||||||||||||| Sbjct: 1697 tgacgtacacaacaagagaa 1716
>gb|AC095064.3| Homo sapiens BAC clone RP11-620C21 from 4, complete sequence Length = 87943 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 13183 gtgagatgccatctctacaa 13202
>gb|AC096641.2| Homo sapiens chromosome 1 clone RP11-361K17, complete sequence Length = 185148 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 117422 gtgagatgccatctctacaa 117403
>gb|AC079856.7| Homo sapiens BAC clone RP11-521B4 from 4, complete sequence Length = 155340 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 58152 gtgagatgccatctctacaa 58133
>ref|XM_692965.1| PREDICTED: Danio rerio similar to Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (LOC569568), mRNA Length = 2328 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 gtgctgagagagctgcagag 369 |||||||||||||||||||| Sbjct: 1458 gtgctgagagagctgcagag 1439
>gb|AY069353.1| Drosophila melanogaster LD05963 full length cDNA Length = 2506 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 329 tgacgtacacaacaagagaa 348 |||||||||||||||||||| Sbjct: 1674 tgacgtacacaacaagagaa 1693
>gb|AC093073.2| Homo sapiens chromosome 19 clone LLNLR-275E5, complete sequence Length = 2616 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 849 gtgagatgccatctctacaa 830
>gb|AC160341.2| Mus musculus BAC clone RP24-226P13 from chromosome 9, complete sequence Length = 139613 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 532 cagcctcagccacctgggat 551 |||||||||||||||||||| Sbjct: 13980 cagcctcagccacctgggat 13961
>gb|AC012146.25| Homo sapiens chromosome 17, clone RP11-46I8, complete sequence Length = 171309 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 120950 gtgagatgccatctctacaa 120969
>gb|AC022684.5|AC022684 Homo sapiens, clone RP11-59H18, complete sequence Length = 164879 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 128309 gtgagatgccatctctacaa 128328
>emb|AJ303140.1|HSA303140 Homo sapiens NOD2 gene for LRR-containing protein, exons 1-11 Length = 163319 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 60156 gtgagatgccatctctacaa 60137
>gb|AC148706.1| Macaca mulatta Major Histocompatibility Complex BAC MMU370O02, complete sequence Length = 181896 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 gcttgtgcatttgtgacgta 335 |||||||||||||||||||| Sbjct: 166018 gcttgtgcatttgtgacgta 166037
>gb|AC090527.3|AC090527 Homo sapiens chromosome 15 clone RP11-96O20 map 15q21.1, complete sequence Length = 173585 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 33339 gtgagatgccatctctacaa 33320
>ref|XM_395009.2| PREDICTED: Apis mellifera similar to Hypothetical protein MGC76229 (LOC411538), mRNA Length = 1236 Score = 40.1 bits (20), Expect = 8.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 109 aaagatcgctactatggagttaatgacccagttgct 144 |||||||| || |||||||||||||| || |||||| Sbjct: 595 aaagatcgttattatggagttaatgatcctgttgct 630
>gb|AC007608.7| Homo sapiens chromosome 16 clone RP11-401P9, complete sequence Length = 169773 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 50483 gtgagatgccatctctacaa 50502
>gb|AC068999.15|AC068999 Homo sapiens chromosome 18 clone RP11-70G19, complete sequence Length = 194813 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 tgagatgccatctctacaac 187 |||||||||||||||||||| Sbjct: 132486 tgagatgccatctctacaac 132505
>gb|AC131157.4| Homo sapiens 12 BAC RP11-70F11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 180907 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 177137 gtgagatgccatctctacaa 177118
>gb|AC016526.6|AC016526 Homo sapiens chromosome 14 clone RP11-361H10 map 14q24.3, complete sequence Length = 179984 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 173962 gtgagatgccatctctacaa 173981
>gb|AC009236.4| Homo sapiens BAC clone RP11-421J10 from 2, complete sequence Length = 178911 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 114597 gtgagatgccatctctacaa 114578
>gb|AC012455.8| Homo sapiens BAC clone RP11-442O5 from 2, complete sequence Length = 97239 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 44332 gtgagatgccatctctacaa 44313
>gb|AC007334.8| Homo sapiens chromosome 16 clone RP11-147B17, complete sequence Length = 170791 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 28 gtgagatgccatctctacaa 47
>gb|AF254638.1|AF254638 Danio rerio vitellogenin 3 precursor (vg3) mRNA, partial cds Length = 3958 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 gatgcctgagacaggggagt 91 |||||||||||||||||||| Sbjct: 2780 gatgcctgagacaggggagt 2799
>gb|AC009376.7| Drosophila melanogaster 3 BAC RPCI98-1D4 (Roswell Park Cancer Institute Human PAC library) complete sequence Length = 183948 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 421 ggcaagccccaagccccaag 440 |||||||||||||||||||| Sbjct: 100063 ggcaagccccaagccccaag 100044
>gb|AC108039.4| Homo sapiens BAC clone RP11-210C5 from 2, complete sequence Length = 168612 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 48199 gtgagatgccatctctacaa 48218
>gb|AC019178.7| Homo sapiens BAC clone RP11-235L22 from 2, complete sequence Length = 107330 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 72603 gtgagatgccatctctacaa 72584
>gb|AC139353.3| Homo sapiens chromosome 19 clone LLNLR-257F11, complete sequence Length = 38480 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 2535 gtgagatgccatctctacaa 2554
>gb|AC112204.2| Homo sapiens chromosome 5 clone RP11-79C6, complete sequence Length = 165304 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 31284 gtgagatgccatctctacaa 31303
>dbj|BS000171.1| Pan troglodytes chromosome 22 clone:PTB-086M04, map 22, complete sequences Length = 218680 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 63228 gtgagatgccatctctacaa 63209
>dbj|BS000157.1| Pan troglodytes chromosome 22 clone:RP43-154K22, map 22, complete sequences Length = 192836 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 71929 gtgagatgccatctctacaa 71910
>ref|XM_317752.2| Anopheles gambiae str. PEST ENSANGP00000002417 (ENSANGG00000002025), partial mRNA Length = 3714 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 285 gatcgaatccatcaggatggtaat 308 ||||||||| |||||||||||||| Sbjct: 1428 gatcgaatcgatcaggatggtaat 1405
>gb|AC007786.1|AC007786 Homo sapiens chromosome 19, BAC 41855 (CIT-B-32o4), complete sequence Length = 229061 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 221837 gtgagatgccatctctacaa 221818
>gb|AC007759.1|AC007759 Homo sapiens chromosome 19, cosmid R27714, complete sequence Length = 40331 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 5415 gtgagatgccatctctacaa 5396
>gb|AC007157.6|AC007157 Homo sapiens, clone hRPK.78_A_1, complete sequence Length = 152937 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 5071 gtgagatgccatctctacaa 5090
>emb|AL359397.3|CNS05TE2 Human chromosome 14 DNA sequence BAC R-247L20 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 168193 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 10909 gtgagatgccatctctacaa 10890
>gb|AE003516.4| Drosophila melanogaster chromosome 3L, section 69 of 83 of the complete sequence Length = 305312 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 ggcaagccccaagccccaag 440 |||||||||||||||||||| Sbjct: 71491 ggcaagccccaagccccaag 71510
>emb|AL109758.3|CNS018OV Human chromosome 14 DNA sequence BAC R-873E2 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 209512 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 200840 gtgagatgccatctctacaa 200821
>gb|AC006131.1|AC006131 Homo sapiens chromosome 19, cosmid F8400, complete sequence Length = 36817 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 8102 gtgagatgccatctctacaa 8121
>dbj|AP002782.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-660M18, complete sequences Length = 153078 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 89774 gtgagatgccatctctacaa 89793
>dbj|AP002967.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-648O15, complete sequence Length = 187568 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 86168 gtgagatgccatctctacaa 86149
>dbj|AP006220.1| Homo sapiens genomic DNA, chromosome 18, clone:RP11-791E5, complete sequence Length = 118000 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 tgagatgccatctctacaac 187 |||||||||||||||||||| Sbjct: 91271 tgagatgccatctctacaac 91290
>gb|AC005391.1|AC005391 Homo sapiens chromosome 19, cosmid R29942, complete sequence Length = 43987 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 25786 gtgagatgccatctctacaa 25805
>emb|BX322557.1|HS112E20 Homo sapiens chromosome 21 from PAC RP1-112E20 map 21q22.3 region D21S171-LA161, complete sequence Length = 124074 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 8448 gtgagatgccatctctacaa 8429
>gb|M63796.1|HUMMMDA Human DNA from cosmid MMDA from chromosome 19q13.3 (obtained by automated sequence analysis) Length = 37314 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gtgagatgccatctctacaa 186 |||||||||||||||||||| Sbjct: 36871 gtgagatgccatctctacaa 36852 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,797,234 Number of Sequences: 3902068 Number of extensions: 4797234 Number of successful extensions: 97554 Number of sequences better than 10.0: 132 Number of HSP's better than 10.0 without gapping: 132 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 97211 Number of HSP's gapped (non-prelim): 334 length of query: 602 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 579 effective length of database: 17,143,297,704 effective search space: 9925969370616 effective search space used: 9925969370616 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
