ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd26d24 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ222778.1|HVJ222778 Hordeum vulgare mRNA for putative thiol protease, clone RG42 Length = 350 Score = 670 bits (338), Expect = 0.0 Identities = 347/350 (99%) Strand = Plus / Plus Query: 2 ggagacatggctttcatgcgctcgtcgtcctcatccgtggctctcgctctgctgccgcta 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ggagacatggctttcatgcgctcgtcgtcctcatccgtggctctcgctctgctgccgcta 60 Query: 62 ctggtggcagccgcattcttcatcccctccacggcttcatcagcttcacataccctcgac 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ctggtggcagccgcattcttcatcccctccacggcttcatcagcttcacataccctcgac 120 Query: 122 catggcttggatggtgaggcactgctgatgctggggaggttccatgggtggatggctgcg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 catggcttggatggtgaggcactgctgatgctggggaggttccatgggtggatggctgcg 180 Query: 182 cacggccggtcgtaccccaccgtggaggagaagctgcgtcggttcgaggtgtaccggagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cacggccggtcgtaccccaccgtggaggagaagctgcgtcggttcgaggtgtaccggagc 240 Query: 242 aacatggagttcatcgaggcggcgaaccgggacagccggatgagctacagcctcggcgag 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 aacatggagttcatcgaggcggcgaaccgggacagccggatgagctacagcctcggcgaa 300 Query: 302 accccgttcaccgacctcacccacgacgagttcatggccatgtacagcag 351 |||||||||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 301 accccgttcaccgacctcacccacgaagagttcatggccatgttcagcag 350
>ref|XM_470991.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1152 Score = 121 bits (61), Expect = 3e-24 Identities = 148/177 (83%) Strand = Plus / Plus Query: 158 aggttccatgggtggatggctgcgcacggccggtcgtaccccaccgtggaggagaagctg 217 ||||||||| |||||||||| ||||| |||||||||| || ||| || ||||||||| Sbjct: 163 aggttccataggtggatggcgacgcacaaccggtcgtacgcctccgccgacgagaagctg 222 Query: 218 cgtcggttcgaggtgtaccggagcaacatggagttcatcgaggcggcgaaccgggacagc 277 || || |||||||| |||||||||||||||||||||||||||||| | |||||| || || Sbjct: 223 cggcgattcgaggtataccggagcaacatggagttcatcgaggcgaccaaccggaacggc 282 Query: 278 cggatgagctacagcctcggcgagaccccgttcaccgacctcacccacgacgagttc 334 | | | || || ||||| || || ||||||||||||||||||||||| |||||| Sbjct: 283 agcctcaccttcaagctcggtgaaacgccgttcaccgacctcacccacgaggagttc 339
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 121 bits (61), Expect = 3e-24 Identities = 148/177 (83%) Strand = Plus / Minus Query: 158 aggttccatgggtggatggctgcgcacggccggtcgtaccccaccgtggaggagaagctg 217 ||||||||| |||||||||| ||||| |||||||||| || ||| || ||||||||| Sbjct: 463237 aggttccataggtggatggcgacgcacaaccggtcgtacgcctccgccgacgagaagctg 463178 Query: 218 cgtcggttcgaggtgtaccggagcaacatggagttcatcgaggcggcgaaccgggacagc 277 || || |||||||| |||||||||||||||||||||||||||||| | |||||| || || Sbjct: 463177 cggcgattcgaggtataccggagcaacatggagttcatcgaggcgaccaaccggaacggc 463118 Query: 278 cggatgagctacagcctcggcgagaccccgttcaccgacctcacccacgacgagttc 334 | | | || || ||||| || || ||||||||||||||||||||||| |||||| Sbjct: 463117 agcctcaccttcaagctcggtgaaacgccgttcaccgacctcacccacgaggagttc 463061 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 622 gctgtcggagcagcagctggtg 643 |||||||||||||||||||||| Sbjct: 7213019 gctgtcggagcagcagctggtg 7213040 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 622 gctgtcggagcagcagctggtgga 645 ||||||||||||| |||||||||| Sbjct: 34240518 gctgtcggagcaggagctggtgga 34240541
>dbj|AK110974.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-C02, full insert sequence Length = 1377 Score = 121 bits (61), Expect = 3e-24 Identities = 148/177 (83%) Strand = Plus / Plus Query: 158 aggttccatgggtggatggctgcgcacggccggtcgtaccccaccgtggaggagaagctg 217 ||||||||| |||||||||| ||||| |||||||||| || ||| || ||||||||| Sbjct: 188 aggttccataggtggatggcgacgcacaaccggtcgtacgcctccgccgacgagaagctg 247 Query: 218 cgtcggttcgaggtgtaccggagcaacatggagttcatcgaggcggcgaaccgggacagc 277 || || |||||||| |||||||||||||||||||||||||||||| | |||||| || || Sbjct: 248 cggcgattcgaggtataccggagcaacatggagttcatcgaggcgaccaaccggaacggc 307 Query: 278 cggatgagctacagcctcggcgagaccccgttcaccgacctcacccacgacgagttc 334 | | | || || ||||| || || ||||||||||||||||||||||| |||||| Sbjct: 308 agcctcaccttcaagctcggtgaaacgccgttcaccgacctcacccacgaggagttc 364
>emb|AL606620.3|OSJN00065 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0085F13, complete sequence Length = 130249 Score = 121 bits (61), Expect = 3e-24 Identities = 148/177 (83%) Strand = Plus / Minus Query: 158 aggttccatgggtggatggctgcgcacggccggtcgtaccccaccgtggaggagaagctg 217 ||||||||| |||||||||| ||||| |||||||||| || ||| || ||||||||| Sbjct: 101989 aggttccataggtggatggcgacgcacaaccggtcgtacgcctccgccgacgagaagctg 101930 Query: 218 cgtcggttcgaggtgtaccggagcaacatggagttcatcgaggcggcgaaccgggacagc 277 || || |||||||| |||||||||||||||||||||||||||||| | |||||| || || Sbjct: 101929 cggcgattcgaggtataccggagcaacatggagttcatcgaggcgaccaaccggaacggc 101870 Query: 278 cggatgagctacagcctcggcgagaccccgttcaccgacctcacccacgacgagttc 334 | | | || || ||||| || || ||||||||||||||||||||||| |||||| Sbjct: 101869 agcctcaccttcaagctcggtgaaacgccgttcaccgacctcacccacgaggagttc 101813
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 293 ctcggcgagaccccgttcaccgacctcacccacgacgagttcatggccatgtaca 347 ||||||||||| | | ||||||||||||| ||||||||||||| |||||||||| Sbjct: 22051824 ctcggcgagacggcctacaccgacctcaccaacgacgagttcatcgccatgtaca 22051770 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 623 ctgtcggagcagcagctggtggac 646 |||||||||||||||||||||||| Sbjct: 12845064 ctgtcggagcagcagctggtggac 12845041
>dbj|AP005396.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0635G10 Length = 146728 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 293 ctcggcgagaccccgttcaccgacctcacccacgacgagttcatggccatgtaca 347 ||||||||||| | | ||||||||||||| ||||||||||||| |||||||||| Sbjct: 93888 ctcggcgagacggcctacaccgacctcaccaacgacgagttcatcgccatgtaca 93834
>gb|AY144442.1| Sorghum bicolor BAC 95A23/98N8.1 Rph region, partial sequence Length = 268433 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 310 caccgacctcacccacgacgagttcatggccatgtaca 347 ||||||||||||| ||||||||||||||||||||||| Sbjct: 152295 caccgacctcaccaccgacgagttcatggccatgtaca 152332
>dbj|AB109216.1| Triticum aestivum mRNA for cysteine protease, complete cds Length = 1260 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 143 ctgctgatgctggggaggttccatgggtggatggctgcgcacggccggtcgtacc 197 |||||||||||||| |||||||| |||||||| | ||||| |||||| |||||| Sbjct: 145 ctgctgatgctgggtaggttccaccggtggatgtcagcgcatggccggacgtacc 199 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 293 ctcggcgagaccccgttcaccgacctcacccacgacgagttcatggc 339 |||||||||| | ||||||||||||||| |||| ||||||||||| Sbjct: 298 ctcggcgagaacgagttcaccgacctcactaacgaggagttcatggc 344
>gb|AY112580.1| Zea mays CL875_1 mRNA sequence Length = 1553 Score = 54.0 bits (27), Expect = 6e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 187 ccggtcgtaccccaccgtggaggagaagctgcgtcggttcgaggtgtaccggagcaacat 246 |||||||||||| || | |||||||| || ||| |||||| |||||||||| ||||||| Sbjct: 220 ccggtcgtacccgacggcggaggagaggcagcgccggttccaggtgtaccgccgcaacat 279 Query: 247 ggagttcatcgaggc 261 ||| ||||||||| Sbjct: 280 tgagcacatcgaggc 294
>gb|AY110841.1| Zea mays CL908_1 mRNA sequence Length = 916 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 297 gcgagaccccgttcaccgacctcacc 322 |||||||||||||||||||||||||| Sbjct: 13 gcgagaccccgttcaccgacctcacc 38
>ref|NM_189456.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1098 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 307 gttcaccgacctcacccacgacgagttca 335 |||| |||||||||||||||||||||||| Sbjct: 297 gttcgccgacctcacccacgacgagttca 325
>gb|BT016603.1| Zea mays clone Contig436 mRNA sequence Length = 1526 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 622 gctgtcggagcagcagctggtggac 646 ||||||||||||||||||||||||| Sbjct: 708 gctgtcggagcagcagctggtggac 732
>gb|AC129716.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0068N01, complete sequence Length = 152233 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 307 gttcaccgacctcacccacgacgagttca 335 |||| |||||||||||||||||||||||| Sbjct: 116726 gttcgccgacctcacccacgacgagttca 116754
>gb|AY335487.1| Oryza sativa (japonica cultivar-group) cysteine protease CP1 mRNA, complete cds Length = 1227 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 307 gttcaccgacctcacccacgacgagttca 335 |||| |||||||||||||||||||||||| Sbjct: 309 gttcgccgacctcacccacgacgagttca 337
>emb|Z97022.1|HVZ97022 Hordeum vulgare gene encoding cysteine proteinase Length = 5593 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 622 gctgtcggagcagcagctggtggac 646 ||||||||||||||||||||||||| Sbjct: 4402 gctgtcggagcagcagctggtggac 4426
>gb|AC079022.2|AC079022 Oryza sativa chromosome 5 clone P0574H01, complete sequence Length = 151589 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 307 gttcaccgacctcacccacgacgagttca 335 |||| |||||||||||||||||||||||| Sbjct: 54877 gttcgccgacctcacccacgacgagttca 54905
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 307 gttcaccgacctcacccacgacgagttca 335 |||| |||||||||||||||||||||||| Sbjct: 455079 gttcgccgacctcacccacgacgagttca 455107
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 307 gttcaccgacctcacccacgacgagttca 335 |||| |||||||||||||||||||||||| Sbjct: 42848361 gttcgccgacctcacccacgacgagttca 42848389 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 302 accccgttcaccgacctcacccacgacgagttc 334 ||||||||| ||||||||||| |||||||||| Sbjct: 24349124 accccgttcgccgacctcaccgccgacgagttc 24349092 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 622 gctgtcggagcagcagctggtggac 646 ||||||||||||| ||||||||||| Sbjct: 13831390 gctgtcggagcaggagctggtggac 13831366 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 622 gctgtcggagcagcagctggtggac 646 ||||||||||||| ||||||||||| Sbjct: 13825867 gctgtcggagcaggagctggtggac 13825891 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 622 gctgtcggagcagcagctggtggac 646 ||||||||||||| ||||||||||| Sbjct: 12729173 gctgtcggagcaggagctggtggac 12729149 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 ccaccgtggaggagaagctg 217 |||||||||||||||||||| Sbjct: 33948781 ccaccgtggaggagaagctg 33948762 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 307 gttcaccgacctcacccacgacgagttc 334 |||| ||||||||||| ||||||||||| Sbjct: 24340977 gttctccgacctcaccgacgacgagttc 24340950 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 307 gttcaccgacctcacccacgacgagttc 334 |||| ||||||||||| ||||||||||| Sbjct: 13831712 gttcgccgacctcaccaacgacgagttc 13831685 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 548 tcttgctgggcgttcacgtcggtggcgacgat 579 ||||||||||||||| || |||||||| |||| Sbjct: 13831461 tcttgctgggcgttcgcggcggtggcggcgat 13831430 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 548 tcttgctgggcgttcacgtcggtggcgacgat 579 ||||||||||||||| || |||||||| |||| Sbjct: 13825796 tcttgctgggcgttcgcggcggtggcggcgat 13825827 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 307 gttcaccgacctcacccacgacgagttc 334 |||| ||||||||||| ||||||||||| Sbjct: 13825544 gttcgccgacctcaccaacgacgagttc 13825571 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 552 gctgggcgttcacgtcggtggcgacgatggag 583 ||||||||||| || |||||||| |||||||| Sbjct: 12729240 gctgggcgttcgcggcggtggcggcgatggag 12729209 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 307 gttcaccgacctcacccacgacgagttc 334 |||| ||||||||||| ||||||||||| Sbjct: 6396028 gttcgccgacctcaccaacgacgagttc 6396001 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 548 tcttgctgggcgttcacgtcggtggcgacgat 579 ||||||||||||||| || |||||||| |||| Sbjct: 6395767 tcttgctgggcgttcgcggcggtggcggcgat 6395736
>dbj|AP003277.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518C01 Length = 173555 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 307 gttcaccgacctcacccacgacgagttca 335 |||| |||||||||||||||||||||||| Sbjct: 42095 gttcgccgacctcacccacgacgagttca 42123
>dbj|AK119182.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-H03, full insert sequence Length = 1377 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 307 gttcaccgacctcacccacgacgagttca 335 |||| |||||||||||||||||||||||| Sbjct: 347 gttcgccgacctcacccacgacgagttca 375
>dbj|AK106508.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-G09, full insert sequence Length = 1409 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 307 gttcaccgacctcacccacgacgagttca 335 |||| |||||||||||||||||||||||| Sbjct: 367 gttcgccgacctcacccacgacgagttca 395
>dbj|AK106011.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-B02, full insert sequence Length = 1377 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 307 gttcaccgacctcacccacgacgagttca 335 |||| |||||||||||||||||||||||| Sbjct: 347 gttcgccgacctcacccacgacgagttca 375
>dbj|AK105881.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-D02, full insert sequence Length = 1519 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 307 gttcaccgacctcacccacgacgagttca 335 |||| |||||||||||||||||||||||| Sbjct: 347 gttcgccgacctcacccacgacgagttca 375
>dbj|AK059528.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-D05, full insert sequence Length = 1332 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 307 gttcaccgacctcacccacgacgagttca 335 |||| |||||||||||||||||||||||| Sbjct: 347 gttcgccgacctcacccacgacgagttca 375
>ref|XM_450799.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1419 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 623 ctgtcggagcagcagctggtggac 646 |||||||||||||||||||||||| Sbjct: 631 ctgtcggagcagcagctggtggac 654
>ref|XM_506663.1| PREDICTED Oryza sativa (japonica cultivar-group), P0027G10.55 mRNA Length = 1882 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 623 ctgtcggagcagcagctggtggac 646 |||||||||||||||||||||||| Sbjct: 639 ctgtcggagcagcagctggtggac 662
>dbj|AP005702.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0027G10 Length = 184759 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 623 ctgtcggagcagcagctggtggac 646 |||||||||||||||||||||||| Sbjct: 152841 ctgtcggagcagcagctggtggac 152818
>dbj|AP005312.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0505H05 Length = 152845 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 623 ctgtcggagcagcagctggtggac 646 |||||||||||||||||||||||| Sbjct: 7048 ctgtcggagcagcagctggtggac 7025
>dbj|AK071091.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079N05, full insert sequence Length = 1419 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 623 ctgtcggagcagcagctggtggac 646 |||||||||||||||||||||||| Sbjct: 631 ctgtcggagcagcagctggtggac 654
>gb|AY104930.1| Zea mays PCO132946 mRNA sequence Length = 1422 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Plus Query: 206 gaggagaagctgcgtcggttcgaggtgt 233 |||||||||||||| ||||||||||||| Sbjct: 275 gaggagaagctgcgccggttcgaggtgt 302 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Plus Query: 312 ccgacctcacccacgacgagttcatggcca 341 |||||||||| ||||||||||||| ||||| Sbjct: 381 ccgacctcacgcacgacgagttcaaggcca 410 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 622 gctgtcggagcagcagctggt 642 ||||||||||||||||||||| Sbjct: 628 gctgtcggagcagcagctggt 648
>dbj|AK070060.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041D01, full insert sequence Length = 1882 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 623 ctgtcggagcagcagctggtgga 645 ||||||||||||||||||||||| Sbjct: 639 ctgtcggagcagcagctggtgga 661
>gb|U32430.1|TAU32430 Triticum aestivum thiol protease mRNA, complete cds Length = 1353 Score = 46.1 bits (23), Expect = 0.14 Identities = 71/87 (81%) Strand = Plus / Plus Query: 248 gagttcatcgaggcggcgaaccgggacagccggatgagctacagcctcggcgagaccccg 307 ||||||||||||||||||||||| || || || | |||| |||||| | || || | Sbjct: 253 gagttcatcgaggcggcgaaccgagatggcaggctctcgtacaccctcggggtgaaccag 312 Query: 308 ttcaccgacctcacccacgacgagttc 334 ||| |||||||||||||||| |||||| Sbjct: 313 ttcgccgacctcacccacgaggagttc 339 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 143 ctgctgatgctggggaggttccatgggtggatggc 177 ||||||||| ||| |||||||||||| |||||||| Sbjct: 148 ctgctgatgatggagaggttccatggctggatggc 182
>ref|XM_474851.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 945 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 622 gctgtcggagcagcagctggtg 643 |||||||||||||||||||||| Sbjct: 420 gctgtcggagcagcagctggtg 441
>gb|DQ489716.1| Rhodococcus erythropolis strain AN12 plasmid pREA400 TraA (traA), PemI-like protein (pemI), and PemK-like protein (pemK) genes, complete cds Length = 9184 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 410 gtccacgagggcaccgccgccg 431 |||||||||||||||||||||| Sbjct: 5035 gtccacgagggcaccgccgccg 5056
>emb|AJ512654.1|LMA512654 Leishmania major partial cpb gene for cysteine proteinase b Length = 522 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 622 gctgtcggagcagcagctggtg 643 |||||||||||||||||||||| Sbjct: 90 gctgtcggagcagcagctggtg 111
>emb|AL606994.3|OSJN00114 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035O13, complete sequence Length = 143298 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 622 gctgtcggagcagcagctggtg 643 |||||||||||||||||||||| Sbjct: 76756 gctgtcggagcagcagctggtg 76777
>gb|AY781344.1| Oryza sativa (japonica cultivar-group) putative cysteine protease mRNA, complete cds Length = 1279 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 622 gctgtcggagcagcagctggtg 643 |||||||||||||||||||||| Sbjct: 639 gctgtcggagcagcagctggtg 660
>gb|U43706.1|LMU43706 Leishmania major cathepsin L-like protease mRNA, complete cds Length = 1332 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 622 gctgtcggagcagcagctggtg 643 |||||||||||||||||||||| Sbjct: 516 gctgtcggagcagcagctggtg 537
>ref|XM_469786.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1460 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 622 gctgtcggagcagcagctggtggac 646 ||||||||||||| ||||||||||| Sbjct: 588 gctgtcggagcaggagctggtggac 612 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 307 gttcaccgacctcacccacgacgagttc 334 |||| ||||||||||| ||||||||||| Sbjct: 330 gttcgccgacctcaccgacgacgagttc 357
>ref|NM_184000.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1026 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 622 gctgtcggagcagcagctggtggac 646 ||||||||||||| ||||||||||| Sbjct: 507 gctgtcggagcaggagctggtggac 531 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 548 tcttgctgggcgttcacgtcggtggcgacgat 579 ||||||||||||||| || |||||||| |||| Sbjct: 436 tcttgctgggcgttcgcggcggtggcggcgat 467 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 307 gttcaccgacctcacccacgacgagttc 334 |||| ||||||||||| ||||||||||| Sbjct: 270 gttcgccgacctcaccaacgacgagttc 297
>ref|NM_183998.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1029 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 622 gctgtcggagcagcagctggtggac 646 ||||||||||||| ||||||||||| Sbjct: 510 gctgtcggagcaggagctggtggac 534 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 548 tcttgctgggcgttcacgtcggtggcgacgat 579 ||||||||||||||| || |||||||| |||| Sbjct: 439 tcttgctgggcgttcgcggcggtggcggcgat 470 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 307 gttcaccgacctcacccacgacgagttc 334 |||| ||||||||||| ||||||||||| Sbjct: 273 gttcgccgacctcaccaacgacgagttc 300
>ref|NM_183859.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1074 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 622 gctgtcggagcagcagctggtggac 646 ||||||||||||| ||||||||||| Sbjct: 537 gctgtcggagcaggagctggtggac 561 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 552 gctgggcgttcacgtcggtggcgacgatggag 583 ||||||||||| || |||||||| |||||||| Sbjct: 470 gctgggcgttcgcggcggtggcggcgatggag 501
>ref|NM_192773.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1080 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 302 accccgttcaccgacctcacccacgacgagttc 334 ||||||||| ||||||||||| |||||||||| Sbjct: 253 accccgttcgccgacctcaccgccgacgagttc 285
>gb|AF377947.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone OSJNBa0032E21, complete sequence Length = 137580 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 622 gctgtcggagcagcagctggtggac 646 ||||||||||||| ||||||||||| Sbjct: 71906 gctgtcggagcaggagctggtggac 71882 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 307 gttcaccgacctcacccacgacgagttc 334 |||| ||||||||||| ||||||||||| Sbjct: 72529 gttcgccgacctcaccgacgacgagttc 72502
>gb|AC146913.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0013C12 map near S6115, complete sequence Length = 123718 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 626 tcggagcagcagctggtggac 646 ||||||||||||||||||||| Sbjct: 34443 tcggagcagcagctggtggac 34463
>gb|AC145324.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0026D03 map near S2137, complete sequence Length = 115141 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 622 gctgtcggagcagcagctggtggac 646 ||||||||||||| ||||||||||| Sbjct: 33236 gctgtcggagcaggagctggtggac 33260
>gb|AC121152.15| Mus musculus chromosome 10, clone RP24-344A4, complete sequence Length = 147999 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 621 tgctgtcggagcagcagctggtgga 645 |||||||||||||||||||| |||| Sbjct: 139295 tgctgtcggagcagcagctgttgga 139319
>gb|AC124998.10| Mus musculus chromosome 10, clone RP24-350B12, complete sequence Length = 185801 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 621 tgctgtcggagcagcagctggtgga 645 |||||||||||||||||||| |||| Sbjct: 162337 tgctgtcggagcagcagctgttgga 162313
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 622 gctgtcggagcagcagctggtggac 646 ||||||||||||| ||||||||||| Sbjct: 30731877 gctgtcggagcaggagctggtggac 30731901 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 307 gttcaccgacctcacccacgacgagttc 334 |||| ||||||||||| ||||||||||| Sbjct: 30731254 gttcgccgacctcaccgacgacgagttc 30731281
>gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genomic sequence, complete sequence Length = 157970 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 622 gctgtcggagcagcagctggtggac 646 ||||||||||||| ||||||||||| Sbjct: 30513 gctgtcggagcaggagctggtggac 30489 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 307 gttcaccgacctcacccacgacgagttc 334 |||| ||||||||||| ||||||||||| Sbjct: 31136 gttcgccgacctcaccgacgacgagttc 31109
>gb|AC166260.7| Mus musculus 10 BAC RP23-330F17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 175641 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 621 tgctgtcggagcagcagctggtgga 645 |||||||||||||||||||| |||| Sbjct: 169704 tgctgtcggagcagcagctgttgga 169728
>gb|BC097978.1| Rattus norvegicus similar to osteopetrosis associated transmembrane protein 1, mRNA (cDNA clone MGC:116111 IMAGE:7442765), complete cds Length = 1484 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 621 tgctgtcggagcagcagctggtgga 645 |||||||||||||||||||| |||| Sbjct: 176 tgctgtcggagcagcagctgctgga 200
>ref|NM_172416.2| Mus musculus osteopetrosis associated transmembrane protein 1 (Ostm1), mRNA Length = 3001 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 621 tgctgtcggagcagcagctggtgga 645 |||||||||||||||||||| |||| Sbjct: 213 tgctgtcggagcagcagctgttgga 237
>gb|AC135225.4| Oryza sativa chromosome 3 BAC OJ1112_G08 genomic sequence, complete sequence Length = 128294 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 622 gctgtcggagcagcagctggtggac 646 ||||||||||||| ||||||||||| Sbjct: 40578 gctgtcggagcaggagctggtggac 40602 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 307 gttcaccgacctcacccacgacgagttc 334 |||| ||||||||||| ||||||||||| Sbjct: 39955 gttcgccgacctcaccgacgacgagttc 39982
>emb|Z49962.2|LMCPB18 Leishmania mexicana lmcpb2.8 gene for cysteine proteinase Length = 2682 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 623 ctgtcggagcagcagctggtg 643 ||||||||||||||||||||| Sbjct: 686 ctgtcggagcagcagctggtg 706
>emb|Z49963.2|LMCPB1 L.mexicana cpb1 gene Length = 3372 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 623 ctgtcggagcagcagctggtg 643 ||||||||||||||||||||| Sbjct: 1320 ctgtcggagcagcagctggtg 1340
>emb|Z14061.1|LMCPBMR Leishmania mexicana mRNA for cysteine proteinase Length = 1564 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 623 ctgtcggagcagcagctggtg 643 ||||||||||||||||||||| Sbjct: 675 ctgtcggagcagcagctggtg 695
>emb|Y09958.1|LMCPB18G L.mexicana cpb18 gene Length = 1527 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 623 ctgtcggagcagcagctggtg 643 ||||||||||||||||||||| Sbjct: 685 ctgtcggagcagcagctggtg 705
>emb|X80876.1|OSCYSPRO O.sativa mRNA for cysteine protease Length = 1440 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 622 gctgtcggagcagcagctggtggac 646 ||||||||||||| ||||||||||| Sbjct: 660 gctgtcggagcaggagctggtggac 684
>emb|AJ628943.1| Leishmania infantum cpb gene for cathepsin L-like cysteine proteinase and partial ORF Length = 6462 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 623 ctgtcggagcagcagctggtg 643 ||||||||||||||||||||| Sbjct: 517 ctgtcggagcagcagctggtg 537
>emb|AJ628942.1| Leishmania infantum hd gene for histone deacetylase and cpb1 gene for cysteine proteinase Length = 12482 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 623 ctgtcggagcagcagctggtg 643 ||||||||||||||||||||| Sbjct: 11667 ctgtcggagcagcagctggtg 11687
>emb|AJ420286.1|LIN420286 Leishmania infantum cpb gene for cysteine proteinase Length = 2767 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 623 ctgtcggagcagcagctggtg 643 ||||||||||||||||||||| Sbjct: 873 ctgtcggagcagcagctggtg 893
>ref|NM_001029925.1| Rattus norvegicus similar to osteopetrosis associated transmembrane protein 1 (LOC499474), mRNA Length = 1484 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 621 tgctgtcggagcagcagctggtgga 645 |||||||||||||||||||| |||| Sbjct: 176 tgctgtcggagcagcagctgctgga 200
>gb|AF309627.1|AF309627 Leishmania donovani clone Ld-F cysteine protease gene, complete cds Length = 1185 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 623 ctgtcggagcagcagctggtg 643 ||||||||||||||||||||| Sbjct: 517 ctgtcggagcagcagctggtg 537
>gb|AF309626.1|AF309626 Leishmania donovani clone Ld-A cysteine protease gene, complete cds Length = 1332 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 623 ctgtcggagcagcagctggtg 643 ||||||||||||||||||||| Sbjct: 517 ctgtcggagcagcagctggtg 537
>dbj|AK050513.1| Mus musculus adult pancreas islet cells cDNA, RIKEN full-length enriched library, clone:C820005P18 product:hypothetical protein, full insert sequence Length = 2976 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 621 tgctgtcggagcagcagctggtgga 645 |||||||||||||||||||| |||| Sbjct: 188 tgctgtcggagcagcagctgttgga 212
>gb|AF004592.2|AF004592 Leishmania donovani chagasi amastigote-specific cysteine protease (ldccys1) mRNA, complete cds Length = 2498 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 623 ctgtcggagcagcagctggtg 643 ||||||||||||||||||||| Sbjct: 865 ctgtcggagcagcagctggtg 885
>dbj|AK053664.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130119J20 product:osteopetrosis associated transmembrane protein 1, full insert sequence Length = 4387 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 621 tgctgtcggagcagcagctggtgga 645 |||||||||||||||||||| |||| Sbjct: 164 tgctgtcggagcagcagctgttgga 188
>dbj|AK004546.1| Mus musculus adult male lung cDNA, RIKEN full-length enriched library, clone:1200002H13 product:hypothetical protein, full insert sequence Length = 2975 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 621 tgctgtcggagcagcagctggtgga 645 |||||||||||||||||||| |||| Sbjct: 191 tgctgtcggagcagcagctgttgga 215
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 626 tcggagcagcagctggtggac 646 ||||||||||||||||||||| Sbjct: 12867107 tcggagcagcagctggtggac 12867127 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 622 gctgtcggagcagcagctggtggac 646 ||||||||||||| ||||||||||| Sbjct: 8299164 gctgtcggagcaggagctggtggac 8299140
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 622 gctgtcggagcagcagctggtggac 646 ||||||||||||| ||||||||||| Sbjct: 30823301 gctgtcggagcaggagctggtggac 30823325 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 307 gttcaccgacctcacccacgacgagttc 334 |||| ||||||||||| ||||||||||| Sbjct: 30822678 gttcgccgacctcaccgacgacgagttc 30822705
>gb|AF533890.1| Mus musculus grey-lethal osteopetrosis (gl) mRNA, complete cds Length = 3001 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 621 tgctgtcggagcagcagctggtgga 645 |||||||||||||||||||| |||| Sbjct: 213 tgctgtcggagcagcagctgttgga 237
>gb|AF133838.1| Sandersonia aurantiaca papain-like cysteine protease (PRT15) mRNA, partial cds Length = 1456 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 622 gctgtcggagcagcagctggtggac 646 ||||||||||||| ||||||||||| Sbjct: 261 gctgtcggagcaggagctggtggac 285
>gb|AF217087.1|AF217087 Leishmania chagasi cathepsin L-like cysteine protease gene, complete cds Length = 1146 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 623 ctgtcggagcagcagctggtg 643 ||||||||||||||||||||| Sbjct: 517 ctgtcggagcagcagctggtg 537
>dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0410E01 Length = 166753 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 302 accccgttcaccgacctcacccacgacgagttc 334 ||||||||| ||||||||||| |||||||||| Sbjct: 95028 accccgttcgccgacctcaccgccgacgagttc 94996 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 307 gttcaccgacctcacccacgacgagttc 334 |||| ||||||||||| ||||||||||| Sbjct: 86881 gttctccgacctcaccgacgacgagttc 86854
>dbj|AP003852.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0440D10 Length = 144340 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 622 gctgtcggagcagcagctggtggac 646 ||||||||||||| ||||||||||| Sbjct: 68793 gctgtcggagcaggagctggtggac 68769 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 622 gctgtcggagcagcagctggtggac 646 ||||||||||||| ||||||||||| Sbjct: 63270 gctgtcggagcaggagctggtggac 63294 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 307 gttcaccgacctcacccacgacgagttc 334 |||| ||||||||||| ||||||||||| Sbjct: 69115 gttcgccgacctcaccaacgacgagttc 69088 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 548 tcttgctgggcgttcacgtcggtggcgacgat 579 ||||||||||||||| || |||||||| |||| Sbjct: 68864 tcttgctgggcgttcgcggcggtggcggcgat 68833 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 548 tcttgctgggcgttcacgtcggtggcgacgat 579 ||||||||||||||| || |||||||| |||| Sbjct: 63199 tcttgctgggcgttcgcggcggtggcggcgat 63230 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 307 gttcaccgacctcacccacgacgagttc 334 |||| ||||||||||| ||||||||||| Sbjct: 62947 gttcgccgacctcaccaacgacgagttc 62974
>dbj|AP003143.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489E06 Length = 140229 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 622 gctgtcggagcagcagctggtggac 646 ||||||||||||| ||||||||||| Sbjct: 9572 gctgtcggagcaggagctggtggac 9548 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 552 gctgggcgttcacgtcggtggcgacgatggag 583 ||||||||||| || |||||||| |||||||| Sbjct: 9639 gctgggcgttcgcggcggtggcggcgatggag 9608
>dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0554D10 Length = 158723 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 622 gctgtcggagcagcagctggtggac 646 ||||||||||||| ||||||||||| Sbjct: 96202 gctgtcggagcaggagctggtggac 96178 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 552 gctgggcgttcacgtcggtggcgacgatggag 583 ||||||||||| || |||||||| |||||||| Sbjct: 96269 gctgggcgttcgcggcggtggcggcgatggag 96238
>gb|AE004999.1| Halobacterium sp. NRC-1 section 30 of 170 of the complete genome Length = 16155 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 567 cggtggcgacgatggagagcgcgca 591 ||||||||||||||| ||||||||| Sbjct: 5252 cggtggcgacgatggcgagcgcgca 5228
>dbj|AK110832.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-A05, full insert sequence Length = 1383 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 302 accccgttcaccgacctcacccacgacgagttc 334 ||||||||| ||||||||||| |||||||||| Sbjct: 333 accccgttcgccgacctcaccgccgacgagttc 365
>dbj|AK071495.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099K03, full insert sequence Length = 1511 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 622 gctgtcggagcagcagctggtggac 646 ||||||||||||| ||||||||||| Sbjct: 666 gctgtcggagcaggagctggtggac 690
>gb|BC057635.1| Mus musculus osteopetrosis associated transmembrane protein 1, mRNA (cDNA clone MGC:67721 IMAGE:4910872), complete cds Length = 2963 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 621 tgctgtcggagcagcagctggtgga 645 |||||||||||||||||||| |||| Sbjct: 152 tgctgtcggagcagcagctgttgga 176
>gb|AY109416.1| Zea mays CL694_1 mRNA sequence Length = 3272 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 622 gctgtcggagcagcagctggtggac 646 ||||||||||||| ||||||||||| Sbjct: 3116 gctgtcggagcaggagctggtggac 3092
>gb|AY896791.1| Leishmania infantum strain MHOM/PA/78/WR285 cathepsin L-like cysteine protease (cpbE) gene, partial cds Length = 607 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 623 ctgtcggagcagcagctggtg 643 ||||||||||||||||||||| Sbjct: 94 ctgtcggagcagcagctggtg 114
>gb|AY896790.1| Leishmania infantum strain MHOM/DZ/82/LIPA59 cathepsin L-like cysteine protease (cpbE) gene, partial cds Length = 232 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 623 ctgtcggagcagcagctggtg 643 ||||||||||||||||||||| Sbjct: 89 ctgtcggagcagcagctggtg 109
>gb|AY896789.1| Leishmania infantum strain MHOM/DZ/82/LIPA59 cathepsin L-like cysteine protease (cpbF) gene, partial cds Length = 438 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 623 ctgtcggagcagcagctggtg 643 ||||||||||||||||||||| Sbjct: 107 ctgtcggagcagcagctggtg 127
>gb|AY896788.1| Leishmania donovani strain IMAR/KE/62/LRC-L57 cathepsin L-like cysteine protease (cpbF) gene, partial cds Length = 639 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 623 ctgtcggagcagcagctggtg 643 ||||||||||||||||||||| Sbjct: 107 ctgtcggagcagcagctggtg 127
>gb|AY896787.1| Leishmania donovani strain MHOM/CN/00/WangJie1 cathepsin L-like cysteine protease (cpbF) gene, partial cds Length = 676 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 623 ctgtcggagcagcagctggtg 643 ||||||||||||||||||||| Sbjct: 42 ctgtcggagcagcagctggtg 62
>gb|AY896786.1| Leishmania donovani strain MHOM/KE/67/MRC(L)3 cathepsin L-like cysteine protease (cpbF) gene, partial cds Length = 741 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 623 ctgtcggagcagcagctggtg 643 ||||||||||||||||||||| Sbjct: 107 ctgtcggagcagcagctggtg 127
>gb|AY896785.1| Leishmania donovani strain MHOM/ET/00/HUSSEN cathepsin L-like cysteine protease (cpbF) gene, partial cds Length = 741 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 623 ctgtcggagcagcagctggtg 643 ||||||||||||||||||||| Sbjct: 107 ctgtcggagcagcagctggtg 127
>gb|AY896784.1| Leishmania donovani strain MHOM/SD/82/GILANI cathepsin L-like cysteine protease (cpbF) gene, partial cds Length = 741 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 623 ctgtcggagcagcagctggtg 643 ||||||||||||||||||||| Sbjct: 107 ctgtcggagcagcagctggtg 127
>gb|AY896783.1| Leishmania donovani strain MHOM/ET/67/HU3 cathepsin L-like cysteine protease (cpbF) gene, partial cds Length = 741 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 623 ctgtcggagcagcagctggtg 643 ||||||||||||||||||||| Sbjct: 107 ctgtcggagcagcagctggtg 127
>gb|AY896782.1| Leishmania infantum strain MHOM/MA/67/ITMAP263 cathepsin L-like cysteine protease (cpbE) gene, partial cds Length = 702 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 623 ctgtcggagcagcagctggtg 643 ||||||||||||||||||||| Sbjct: 107 ctgtcggagcagcagctggtg 127
>gb|AY896781.1| Leishmania infantum strain MHOM/FR/78/LEM75 cathepsin L-like cysteine protease (cpbE) gene, partial cds Length = 702 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 623 ctgtcggagcagcagctggtg 643 ||||||||||||||||||||| Sbjct: 107 ctgtcggagcagcagctggtg 127
>gb|AY896780.1| Leishmania infantum strain MHOM/FR/85/LEM663 cathepsin L-like cysteine protease (cpbE) gene, partial cds Length = 702 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 623 ctgtcggagcagcagctggtg 643 ||||||||||||||||||||| Sbjct: 107 ctgtcggagcagcagctggtg 127
>gb|AY896779.1| Leishmania infantum strain MHOM/FR/82/LEM356 cathepsin L-like cysteine protease (cpbE) gene, partial cds Length = 702 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 623 ctgtcggagcagcagctggtg 643 ||||||||||||||||||||| Sbjct: 107 ctgtcggagcagcagctggtg 127
>gb|AY896778.1| Leishmania infantum strain MHOM/ES/81/BCN1 cathepsin L-like cysteine protease (cpbE) gene, partial cds Length = 702 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 623 ctgtcggagcagcagctggtg 643 ||||||||||||||||||||| Sbjct: 107 ctgtcggagcagcagctggtg 127
>gb|AY896777.1| Leishmania infantum strain MHOM/FR/85/LEM716 cathepsin L-like cysteine protease (cpbE) gene, partial cds Length = 702 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 623 ctgtcggagcagcagctggtg 643 ||||||||||||||||||||| Sbjct: 107 ctgtcggagcagcagctggtg 127
>gb|AY896776.1| Leishmania infantum strain MHOM/FR/87/LEM1098 cathepsin L-like cysteine protease (cpbE) gene, partial cds Length = 702 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 623 ctgtcggagcagcagctggtg 643 ||||||||||||||||||||| Sbjct: 107 ctgtcggagcagcagctggtg 127
>dbj|AB004648.1| Oryza sativa (japonica cultivar-group) RepA gene for cysteine endopeptidase, complete cds Length = 3836 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 622 gctgtcggagcagcagctggtggac 646 ||||||||||||| ||||||||||| Sbjct: 1770 gctgtcggagcaggagctggtggac 1794
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 626 tcggagcagcagctggtggac 646 ||||||||||||||||||||| Sbjct: 12947314 tcggagcagcagctggtggac 12947334 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 622 gctgtcggagcagcagctggtggac 646 ||||||||||||| ||||||||||| Sbjct: 8369927 gctgtcggagcaggagctggtggac 8369903
>gb|U09349.1|ABU09349 Azospirillum brasilense Sp7 UDP-glucose 4-epimerase (exoB2) gene, complete cds Length = 1201 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 591 aggcgatcagcaccggcggatcgcc 615 ||||||||||||||| ||||||||| Sbjct: 941 aggcgatcagcaccgccggatcgcc 917
>gb|L00718.1|LEICYSPROB Leishmania pifani cysteine proteinase (lpcys2) mRNA Length = 501 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 623 ctgtcggagcagcagctggtg 643 ||||||||||||||||||||| Sbjct: 88 ctgtcggagcagcagctggtg 108
>gb|M97695.1|LEICYSPNS Leishmania pifanoi cysteine proteinase (cys2) gene, complete cds Length = 2662 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 623 ctgtcggagcagcagctggtg 643 ||||||||||||||||||||| Sbjct: 683 ctgtcggagcagcagctggtg 703
>gb|AC153630.1| Mus musculus 6 BAC RP23-289O16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 217496 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 gtgaggcactgctgatgctg 154 |||||||||||||||||||| Sbjct: 203263 gtgaggcactgctgatgctg 203244
>ref|NM_188465.1| Oryza sativa (japonica cultivar-group), Ozsa8160 predicted mRNA Length = 1050 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 548 tcttgctgggcgttcacgtcggtggcgacgat 579 ||||||||||||||| || |||||||| |||| Sbjct: 433 tcttgctgggcgttcgcggcggtggcggcgat 464 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 307 gttcaccgacctcacccacgacgagttc 334 |||| ||||||||||| ||||||||||| Sbjct: 267 gttcgccgacctcaccaacgacgagttc 294
>ref|XM_474296.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1473 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 622 gctgtcggagcagcagctggtgga 645 ||||||||||||| |||||||||| Sbjct: 606 gctgtcggagcaggagctggtgga 629
>ref|NM_190938.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1404 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 ccaccgtggaggagaagctg 217 |||||||||||||||||||| Sbjct: 59 ccaccgtggaggagaagctg 78
>ref|NM_192771.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1083 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 307 gttcaccgacctcacccacgacgagttc 334 |||| ||||||||||| ||||||||||| Sbjct: 276 gttctccgacctcaccgacgacgagttc 303
>ref|XM_476390.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1059 Score = 40.1 bits (20), Expect = 8.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 308 ttcaccgacctcacccacgacgagttcatggccatgtaca 347 ||||||||||||||| ||| ||||||| |||||||||| Sbjct: 271 ttcaccgacctcaccgacgccgagttcgccgccatgtaca 310
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 gagggcaccgccgccgtcga 435 |||||||||||||||||||| Sbjct: 2528282 gagggcaccgccgccgtcga 2528301
>gb|AC093366.9| Mus musculus chromosome 8, clone RP23-60P23, complete sequence Length = 230236 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 258 aggcggcgaaccgggacagccgga 281 ||||||||| |||||||||||||| Sbjct: 148509 aggcggcgagccgggacagccgga 148532
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 cacgagggcaccgccgccgt 432 |||||||||||||||||||| Sbjct: 2317537 cacgagggcaccgccgccgt 2317556 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 373 ggaggaggcgacggtgatcacaac 396 |||||||||| ||||||||||||| Sbjct: 1746303 ggaggaggcgccggtgatcacaac 1746280
>ref|XM_420326.1| PREDICTED: Gallus gallus similar to RAB39B, member RAS oncogene family (LOC422354), mRNA Length = 1224 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 tgaggcactgctgatgctgg 155 |||||||||||||||||||| Sbjct: 276 tgaggcactgctgatgctgg 295
>ref|XM_875336.1| PREDICTED: Bos taurus cadherin 3, P-cadherin (placental), transcript variant 6 (CDH3), mRNA Length = 3476 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 cgtcgtcctcatccgtggct 43 |||||||||||||||||||| Sbjct: 1062 cgtcgtcctcatccgtggct 1043
>ref|XM_875263.1| PREDICTED: Bos taurus cadherin 3, P-cadherin (placental), transcript variant 5 (CDH3), mRNA Length = 3464 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 cgtcgtcctcatccgtggct 43 |||||||||||||||||||| Sbjct: 1062 cgtcgtcctcatccgtggct 1043
>ref|XM_875199.1| PREDICTED: Bos taurus cadherin 3, P-cadherin (placental), transcript variant 4 (CDH3), mRNA Length = 3464 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 cgtcgtcctcatccgtggct 43 |||||||||||||||||||| Sbjct: 1062 cgtcgtcctcatccgtggct 1043
>ref|XM_875131.1| PREDICTED: Bos taurus cadherin 3, P-cadherin (placental), transcript variant 3 (CDH3), mRNA Length = 3272 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 cgtcgtcctcatccgtggct 43 |||||||||||||||||||| Sbjct: 1062 cgtcgtcctcatccgtggct 1043
>ref|XM_614683.2| PREDICTED: Bos taurus cadherin 3, P-cadherin (placental), transcript variant 1 (CDH3), mRNA Length = 3461 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 cgtcgtcctcatccgtggct 43 |||||||||||||||||||| Sbjct: 1062 cgtcgtcctcatccgtggct 1043
>gb|BC012711.1| Mus musculus farnesyltransferase, CAAX box, alpha, mRNA (cDNA clone MGC:14009 IMAGE:4019240), complete cds Length = 1671 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 258 aggcggcgaaccgggacagccgga 281 ||||||||| |||||||||||||| Sbjct: 75 aggcggcgagccgggacagccgga 98
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 557 gcgttcacgtcggtggcgac 576 |||||||||||||||||||| Sbjct: 2870373 gcgttcacgtcggtggcgac 2870392
>ref|NM_008033.2| Mus musculus farnesyltransferase, CAAX box, alpha (Fnta), mRNA Length = 1883 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 258 aggcggcgaaccgggacagccgga 281 ||||||||| |||||||||||||| Sbjct: 58 aggcggcgagccgggacagccgga 81
>gb|DQ279927.1| Human herpesvirus 4 strain AG876, complete genome Length = 172764 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 ccatggcttggatggtgagg 140 |||||||||||||||||||| Sbjct: 84090 ccatggcttggatggtgagg 84071
>gb|AC115863.17| Mus musculus chromosome 9, clone RP24-295J1, complete sequence Length = 174095 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 ggcttggatggtgaggcact 144 |||||||||||||||||||| Sbjct: 153889 ggcttggatggtgaggcact 153870
>gb|AY224556.1| Oryza sativa (japonica cultivar-group) isolate 26646 glycerol-3-phosphate dehydrogenase-like protein mRNA, partial cds Length = 738 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 ccaccgtggaggagaagctg 217 |||||||||||||||||||| Sbjct: 74 ccaccgtggaggagaagctg 93
>gb|AC163350.4| Mus musculus BAC clone RP23-186B12 from chromosome 9, complete sequence Length = 203468 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ggcttggatggtgaggcact 144 |||||||||||||||||||| Sbjct: 157375 ggcttggatggtgaggcact 157394
>emb|BX908804.17| Zebrafish DNA sequence from clone CH211-163M16 in linkage group 3, complete sequence Length = 162642 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 624 tgtcggagcagcagctggtg 643 |||||||||||||||||||| Sbjct: 6615 tgtcggagcagcagctggtg 6596
>gb|AY515271.1| Taenia solium cathepsin L-like cysteine proteinase mRNA, complete cds Length = 1216 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 623 ctgtcggagcagcagctggtggac 646 ||||| |||||||||||||||||| Sbjct: 533 ctgtccgagcagcagctggtggac 556
>emb|BX842578.1| Mycobacterium tuberculosis H37Rv complete genome; segment 7/13 Length = 346186 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 cacgagggcaccgccgccgt 432 |||||||||||||||||||| Sbjct: 236501 cacgagggcaccgccgccgt 236520
>emb|BX842577.1| Mycobacterium tuberculosis H37Rv complete genome; segment 6/13 Length = 347496 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 373 ggaggaggcgacggtgatcacaac 396 |||||||||| ||||||||||||| Sbjct: 14893 ggaggaggcgccggtgatcacaac 14870
>emb|BX248341.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 8/14 Length = 306050 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 cacgagggcaccgccgccgt 432 |||||||||||||||||||| Sbjct: 94117 cacgagggcaccgccgccgt 94136
>emb|BX248339.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 6/14 Length = 300050 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 373 ggaggaggcgacggtgatcacaac 396 |||||||||| ||||||||||||| Sbjct: 116163 ggaggaggcgccggtgatcacaac 116140
>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29 Length = 292200 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 583 gagcgcgcaggcgatcagca 602 |||||||||||||||||||| Sbjct: 56355 gagcgcgcaggcgatcagca 56336
>emb|AL606619.3|OSJN00032 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043A12, complete sequence Length = 190432 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 622 gctgtcggagcagcagctggtgga 645 ||||||||||||| |||||||||| Sbjct: 151900 gctgtcggagcaggagctggtgga 151923
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 560 ttcacgtcggtggcgacgatggag 583 ||||||||| |||||||||||||| Sbjct: 6459875 ttcacgtcgatggcgacgatggag 6459898
>dbj|AK153252.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830129K06 product:farnesyltransferase, CAAX box, alpha, full insert sequence Length = 1626 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 258 aggcggcgaaccgggacagccgga 281 ||||||||| |||||||||||||| Sbjct: 52 aggcggcgagccgggacagccgga 75
>dbj|AK010744.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410089B03 product:farnesyltransferase, CAAX box, alpha, full insert sequence Length = 1883 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 258 aggcggcgaaccgggacagccgga 281 ||||||||| |||||||||||||| Sbjct: 58 aggcggcgagccgggacagccgga 81
>dbj|AK090346.1| Mus musculus 8 days neonate male testis cDNA, RIKEN full-length enriched library, clone:G630057C22 product:farnesyltransferase, CAAX box, alpha, full insert sequence Length = 1629 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 258 aggcggcgaaccgggacagccgga 281 ||||||||| |||||||||||||| Sbjct: 57 aggcggcgagccgggacagccgga 80
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 557 gcgttcacgtcggtggcgac 576 |||||||||||||||||||| Sbjct: 642690 gcgttcacgtcggtggcgac 642709
>gb|AC158678.6| Mus musculus 6 BAC RP23-142I6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 217586 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 gtgaggcactgctgatgctg 154 |||||||||||||||||||| Sbjct: 99966 gtgaggcactgctgatgctg 99985
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 8.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 308 ttcaccgacctcacccacgacgagttcatggccatgtaca 347 ||||||||||||||| ||| ||||||| |||||||||| Sbjct: 463553 ttcaccgacctcaccgacgccgagttcgccgccatgtaca 463592
>gb|S45632.1| nuclear antigen-3B {exons BERF2a and BERF2b} [Epstein-Barr virus-2 EBV-2, MISP, Japanese isolate, Genomic, 3840 nt] Length = 3840 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 ccatggcttggatggtgagg 140 |||||||||||||||||||| Sbjct: 1158 ccatggcttggatggtgagg 1139
>dbj|AP002861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0665D10 Length = 134967 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 307 gttcaccgacctcacccacgacgagttc 334 |||| ||||||||||| ||||||||||| Sbjct: 18423 gttcgccgacctcaccaacgacgagttc 18396 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 548 tcttgctgggcgttcacgtcggtggcgacgat 579 ||||||||||||||| || |||||||| |||| Sbjct: 18162 tcttgctgggcgttcgcggcggtggcggcgat 18131
>dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0515G01 Length = 175072 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 307 gttcaccgacctcacccacgacgagttc 334 |||| ||||||||||| ||||||||||| Sbjct: 167094 gttcgccgacctcaccaacgacgagttc 167067 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 548 tcttgctgggcgttcacgtcggtggcgacgat 579 ||||||||||||||| || |||||||| |||| Sbjct: 166833 tcttgctgggcgttcgcggcggtggcggcgat 166802
>dbj|AP003221.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0003D09 Length = 161970 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 ccaccgtggaggagaagctg 217 |||||||||||||||||||| Sbjct: 80224 ccaccgtggaggagaagctg 80205
>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0585H11 Length = 149371 Score = 40.1 bits (20), Expect = 8.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 308 ttcaccgacctcacccacgacgagttcatggccatgtaca 347 ||||||||||||||| ||| ||||||| |||||||||| Sbjct: 65717 ttcaccgacctcaccgacgccgagttcgccgccatgtaca 65756
>dbj|AK107506.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-E06, full insert sequence Length = 1722 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 622 gctgtcggagcagcagctggtgga 645 ||||||||||||| |||||||||| Sbjct: 717 gctgtcggagcaggagctggtgga 740
>dbj|AK073318.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025P14, full insert sequence Length = 1898 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 ccaccgtggaggagaagctg 217 |||||||||||||||||||| Sbjct: 315 ccaccgtggaggagaagctg 334
>dbj|AK070448.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048F12, full insert sequence Length = 1403 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 307 gttcaccgacctcacccacgacgagttc 334 |||| ||||||||||| ||||||||||| Sbjct: 308 gttctccgacctcaccgacgacgagttc 335
>dbj|AP003759.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1567_G09 Length = 121388 Score = 40.1 bits (20), Expect = 8.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 308 ttcaccgacctcacccacgacgagttcatggccatgtaca 347 ||||||||||||||| ||| ||||||| |||||||||| Sbjct: 17465 ttcaccgacctcaccgacgccgagttcgccgccatgtaca 17504
>gb|AY110563.1| Zea mays CL897_1 mRNA sequence Length = 794 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 623 ctgtcggagcagcagctggtggac 646 |||||||||||| ||||||||||| Sbjct: 126 ctgtcggagcaggagctggtggac 149
>gb|AY110047.1| Zea mays CL878_1 mRNA sequence Length = 1403 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 623 ctgtcggagcagcagctggtggac 646 |||||||||||| ||||||||||| Sbjct: 600 ctgtcggagcaggagctggtggac 623
>gb|AY106278.1| Zea mays PCO137999 mRNA sequence Length = 1382 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 307 gttcaccgacctcacccacgacgagttc 334 |||| ||||||||||| ||||||||||| Sbjct: 70 gttcgccgacctcaccaacgacgagttc 97
>emb|AL732356.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0624F09, complete sequence Length = 95419 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 622 gctgtcggagcagcagctggtgga 645 ||||||||||||| |||||||||| Sbjct: 23157 gctgtcggagcaggagctggtgga 23180
>gb|AC171012.3| Gallus gallus BAC clone CH261-128I7 from chromosome ul, complete sequence Length = 231142 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 tgaggcactgctgatgctgg 155 |||||||||||||||||||| Sbjct: 141613 tgaggcactgctgatgctgg 141594
>gb|L42023.1| Haemophilus influenzae Rd KW20, complete genome Length = 1830138 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 624 tgtcggagcagcagctggtg 643 |||||||||||||||||||| Sbjct: 1583912 tgtcggagcagcagctggtg 1583931
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 ccccaccgtggaggagaagc 215 |||||||||||||||||||| Sbjct: 736939 ccccaccgtggaggagaagc 736920
>gb|AC167967.6| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940144D9, complete sequence Length = 114276 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 557 gcgttcacgtcggtggcgacgatg 580 |||||||| ||||||||||||||| Sbjct: 84451 gcgttcacctcggtggcgacgatg 84428
>gb|M34440.1|HS4NA3ABC Epstein-Barr virus nuclear antigen EBNA-3A, EBNA-3B, and EBNA-3C genes, complete cds Length = 10089 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 ccatggcttggatggtgagg 140 |||||||||||||||||||| Sbjct: 4253 ccatggcttggatggtgagg 4234
>dbj|D49744.1|MUSFASA Mouse mRNA for farnesyltransferase alpha subunit, complete cds Length = 1629 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 258 aggcggcgaaccgggacagccgga 281 ||||||||| |||||||||||||| Sbjct: 51 aggcggcgagccgggacagccgga 74 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,363,518 Number of Sequences: 3902068 Number of extensions: 4363518 Number of successful extensions: 85694 Number of sequences better than 10.0: 161 Number of HSP's better than 10.0 without gapping: 170 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 84107 Number of HSP's gapped (non-prelim): 1587 length of query: 646 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 623 effective length of database: 17,143,297,704 effective search space: 10680274469592 effective search space used: 10680274469592 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
