ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd25o23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK070395.1| Oryza sativa (japonica cultivar-group) cDNA clon... 242 1e-60
2dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 159 1e-35
3gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 159 1e-35
4emb|AL954870.3|CNS08CD9 Oryza sativa chromosome 12, . BAC OSJNBb... 159 1e-35
5gb|AC134246.4| Mus musculus BAC clone RP23-199B2 from 3, complet... 50 0.008
6gb|AC145168.5| Mus musculus BAC clone RP23-398K14 from 3, comple... 50 0.008
7ref|NM_124968.1| Arabidopsis thaliana unknown protein AT5G55860 ... 48 0.031
8gb|AY735732.1| Arabidopsis thaliana hypothetical protein AT5G558... 48 0.031
9gb|DQ056724.1| Arabidopsis thaliana hypothetical protein (At5g55... 48 0.031
10dbj|AB118020.1| Oryza sativa (japonica cultivar-group) bip134 mR... 48 0.031
11dbj|AB018120.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 48 0.031
12gb|AC126807.4| Mus musculus BAC clone RP23-306D4 from chromosome... 44 0.48
13gb|AC134856.3| Mus musculus BAC clone RP23-291B16 from 18, compl... 44 0.48
14emb|AL773526.11| Mouse DNA sequence from clone RP23-181M13 on ch... 44 0.48
15ref|NM_101087.1| Arabidopsis thaliana unknown protein AT1G12150 ... 42 1.9
16gb|AC154314.2| Mus musculus BAC clone RP23-347J22 from chromosom... 42 1.9
17ref|NM_145469.2| Mus musculus NIPA-like domain containing 2 (Npa... 42 1.9
18gb|AC130713.4| Mus musculus BAC clone RP23-316K10 from chromosom... 42 1.9
19gb|BC058207.1| Mus musculus NIPA-like domain containing 2, mRNA ... 42 1.9
20gb|BC030399.1| Mus musculus NIPA-like domain containing 2, mRNA ... 42 1.9
21gb|BC016107.1| Mus musculus NIPA-like domain containing 2, mRNA ... 42 1.9
22gb|AC118463.2| Homo sapiens chromosome 5 clone RP11-60F22, compl... 42 1.9
23gb|AC114965.2| Homo sapiens chromosome 5 clone RP11-28P24, compl... 42 1.9
24dbj|AK132530.1| Mus musculus 10 days neonate skin cDNA, RIKEN fu... 42 1.9
25gb|AC131108.3| Mus musculus BAC clone RP23-351K24 from chromosom... 42 1.9
26dbj|AK079085.1| Mus musculus adult male diencephalon cDNA, RIKEN... 42 1.9
27dbj|AK038556.1| Mus musculus adult male hypothalamus cDNA, RIKEN... 42 1.9
28dbj|AK034282.1| Mus musculus adult male diencephalon cDNA, RIKEN... 42 1.9
29dbj|AK033975.1| Mus musculus adult male diencephalon cDNA, RIKEN... 42 1.9
30gb|AC022522.2|AC022522 Arabidopsis thaliana chromosome I BAC T28... 42 1.9
31ref|XM_343227.2| PREDICTED: Rattus norvegicus similar to RIKEN c... 42 1.9
32gb|AC140293.4| Mus musculus BAC clone RP24-328A10 from 13, compl... 42 1.9
33gb|AC140933.1| Gallus gallus BAC clone TAM31-60P10 from chromoso... 42 1.9
34gb|AC169677.2| Mus musculus BAC clone RP23-442J18 from chromosom... 40 7.5
35gb|AC168206.7| Mus musculus chromosome 1, clone RP23-17B20, comp... 40 7.5
36gb|BT016569.1| Zea mays clone Contig402 mRNA sequence 40 7.5
37gb|BC021505.1| Mus musculus pleckstrin homology domain containin... 40 7.5
38gb|BC033481.1| Mus musculus pleckstrin homology domain containin... 40 7.5
39gb|BC014853.1| Mus musculus pleckstrin homology domain containin... 40 7.5
40gb|AC099582.7| Mus musculus chromosome 1, clone RP23-188D7, comp... 40 7.5
41gb|AC140478.2| Mus musculus BAC clone RP24-149A3 from chromosome... 40 7.5
42gb|AY557662.1| Saccharomyces cerevisiae clone FLH001571.01X YDR0... 40 7.5
43ref|XM_980433.1| PREDICTED: Mus musculus hypothetical protein LO... 40 7.5
44ref|XM_981247.1| PREDICTED: Mus musculus hypothetical protein LO... 40 7.5
45ref|XM_992967.1| PREDICTED: Mus musculus hypothetical protein LO... 40 7.5
46gb|AC140029.19| Medicago truncatula clone mth2-20g24, complete s... 40 7.5
47gb|BC031390.1| Mus musculus mRNA similar to hypothetical protein... 40 7.5
48emb|Z46796.1|SC8554 S.cerevisiae chromosome IV cosmid 8554 40 7.5
49emb|X82086.1|SCCHROIV S.cerevisiae DNA for right arm of chromoso... 40 7.5
50emb|X52382.1|SAEF1A Sulfolobus acidocaldarius S7, EF-1a, S10 and... 40 7.5
51emb|BX842644.1| Mycoplasma mycoides subsp. mycoides SC genomic D... 40 7.5
52gb|AC161890.4| Mus musculus 6 BAC RP23-356P12 (Roswell Park Canc... 40 7.5
53gb|CP000077.1| Sulfolobus acidocaldarius DSM 639, complete genome 40 7.5
54gb|AC099780.2| Homo sapiens chromosome 3 clone RP11-769M23, comp... 40 7.5
55dbj|AK148428.1| Mus musculus B16 F10Y cells cDNA, RIKEN full-len... 40 7.5
56dbj|AK042154.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 40 7.5
57dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
58dbj|AP005325.5| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
59dbj|AK129423.1| Mus musculus mRNA for mKIAA1686 protein 40 7.5
60emb|BX255885.5| Zebrafish DNA sequence from clone CH211-213M12 i... 40 7.5
61emb|BX248410.4| Zebrafish DNA sequence from clone DKEY-65M5 in l... 40 7.5
62gb|AF079980.1|AF079980 Microtus ochrogaster oxytocin receptor (O... 40 7.5
63gb|AF152364.1|AF152364 Homo sapiens constitutive fragile region ... 40 7.5
64emb|Z74375.1|SCYDR079W S.cerevisiae chromosome IV reading frame ... 40 7.5
65ref|NM_144920.2| Mus musculus pleckstrin homology domain contain... 40 7.5
66gb|BC096618.1| Mus musculus mitogen-activated protein kinase ass... 40 7.5
67gb|AY653733.1| Acanthamoeba polyphaga mimivirus, complete genome 40 7.5
68gb|U91943.1|SCU91943 Saccharomyces cerevisiae cytochrome c oxida... 40 7.5
69emb|AL808102.8| Mouse DNA sequence from clone RP23-192O6 on chro... 40 7.5
70dbj|AB000223.1| Yeast DNA for Vam2p, complete cds 40 7.5
71dbj|AB014024.1| Astrephomene perforata chloroplast atpB gene for... 40 7.5 
>dbj|AK070395.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050F09, full
           insert sequence
          Length = 2355

 Score =  242 bits (122), Expect = 1e-60
 Identities = 257/302 (85%)
 Strand = Plus / Plus

                                                                       
Query: 253 actgacgcagaaaaattggaggttggagaaatagatacaagagctccttttgaatctgtc 312
           ||||| |||||||||   ||||||||||||||||| ||||| |||||||||||||| |||
Sbjct: 265 actgatgcagaaaaaacagaggttggagaaatagacacaagggctccttttgaatccgtc 324

                                                                       
Query: 313 aaagctgccgtaagcttatttggtgaagtaaggttttcatctgacaaatcagctgcgaga 372
           |||||||| |||||||||||||| |||||  | ||||||||||||||||||||||| || 
Sbjct: 325 aaagctgcagtaagcttatttggggaagttcgattttcatctgacaaatcagctgcaagg 384

                                                                       
Query: 373 aagccaaaggctcctcaagcagagaagatgttagctaaggagaccgaacttcatttggcc 432
           ||||||||| ||||||| ||||||| | |||||||||||||||| ||||| || ||||||
Sbjct: 385 aagccaaagcctcctcaggcagagagggtgttagctaaggagacagaactgcacttggcc 444

                                                                       
Query: 433 cagaaagagttgaataaatataaggaacaactgagtaatgctgaaactgccagactacag 492
           ||||||||||| |||||||| ||||| || || |  |||||||| ||  ||||| | || 
Sbjct: 445 cagaaagagttaaataaatacaaggatcagctcaacaatgctgagacaaccagagtgcaa 504

                                                                       
Query: 493 gccctctctgagttggagaaagctagaaaaactgttgatgaactaactactaagctggat 552
           ||  | |||||| ||||||||||||  ||||||||||| || || || | ||||||||||
Sbjct: 505 gcgttatctgagctggagaaagctaagaaaactgttgaggacctgaccaataagctggat 564

             
Query: 553 gc 554
           ||
Sbjct: 565 gc 566
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  159 bits (80), Expect = 1e-35
 Identities = 128/144 (88%)
 Strand = Plus / Plus

                                                                           
Query: 253     actgacgcagaaaaattggaggttggagaaatagatacaagagctccttttgaatctgtc 312
               ||||| |||||||||   ||||||||||||||||| ||||| |||||||||||||| |||
Sbjct: 9908028 actgatgcagaaaaaacagaggttggagaaatagacacaagggctccttttgaatccgtc 9908087

                                                                           
Query: 313     aaagctgccgtaagcttatttggtgaagtaaggttttcatctgacaaatcagctgcgaga 372
               |||||||| |||||||||||||| |||||  | ||||||||||||||||||||||| || 
Sbjct: 9908088 aaagctgcagtaagcttatttggggaagttcgattttcatctgacaaatcagctgcaagg 9908147

                                       
Query: 373     aagccaaaggctcctcaagcagag 396
               ||||||||| ||||||| ||||||
Sbjct: 9908148 aagccaaagcctcctcaggcagag 9908171



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 127/154 (82%)
 Strand = Plus / Plus

                                                                           
Query: 401     tgttagctaaggagaccgaacttcatttggcccagaaagagttgaataaatataaggaac 460
               |||||||||||||||| ||||| || ||||||||||||||||| |||||||| ||||| |
Sbjct: 9911969 tgttagctaaggagacagaactgcacttggcccagaaagagttaaataaatacaaggatc 9912028

                                                                           
Query: 461     aactgagtaatgctgaaactgccagactacaggccctctctgagttggagaaagctagaa 520
               | || |  |||||||| ||  ||||| | || ||  | |||||| ||||||||||||  |
Sbjct: 9912029 agctcaacaatgctgagacaaccagagtgcaagcgttatctgagctggagaaagctaaga 9912088

                                                 
Query: 521     aaactgttgatgaactaactactaagctggatgc 554
               |||||||||| || || || | ||||||||||||
Sbjct: 9912089 aaactgttgaggacctgaccaataagctggatgc 9912122
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  159 bits (80), Expect = 1e-35
 Identities = 128/144 (88%)
 Strand = Plus / Plus

                                                                           
Query: 253     actgacgcagaaaaattggaggttggagaaatagatacaagagctccttttgaatctgtc 312
               ||||| |||||||||   ||||||||||||||||| ||||| |||||||||||||| |||
Sbjct: 9907913 actgatgcagaaaaaacagaggttggagaaatagacacaagggctccttttgaatccgtc 9907972

                                                                           
Query: 313     aaagctgccgtaagcttatttggtgaagtaaggttttcatctgacaaatcagctgcgaga 372
               |||||||| |||||||||||||| |||||  | ||||||||||||||||||||||| || 
Sbjct: 9907973 aaagctgcagtaagcttatttggggaagttcgattttcatctgacaaatcagctgcaagg 9908032

                                       
Query: 373     aagccaaaggctcctcaagcagag 396
               ||||||||| ||||||| ||||||
Sbjct: 9908033 aagccaaagcctcctcaggcagag 9908056



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 127/154 (82%)
 Strand = Plus / Plus

                                                                           
Query: 401     tgttagctaaggagaccgaacttcatttggcccagaaagagttgaataaatataaggaac 460
               |||||||||||||||| ||||| || ||||||||||||||||| |||||||| ||||| |
Sbjct: 9911854 tgttagctaaggagacagaactgcacttggcccagaaagagttaaataaatacaaggatc 9911913

                                                                           
Query: 461     aactgagtaatgctgaaactgccagactacaggccctctctgagttggagaaagctagaa 520
               | || |  |||||||| ||  ||||| | || ||  | |||||| ||||||||||||  |
Sbjct: 9911914 agctcaacaatgctgagacaaccagagtgcaagcgttatctgagctggagaaagctaaga 9911973

                                                 
Query: 521     aaactgttgatgaactaactactaagctggatgc 554
               |||||||||| || || || | ||||||||||||
Sbjct: 9911974 aaactgttgaggacctgaccaataagctggatgc 9912007
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>emb|AL954870.3|CNS08CD9 Oryza sativa chromosome 12, . BAC OSJNBb0112E17 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 140806

 Score =  159 bits (80), Expect = 1e-35
 Identities = 128/144 (88%)
 Strand = Plus / Minus

                                                                         
Query: 253   actgacgcagaaaaattggaggttggagaaatagatacaagagctccttttgaatctgtc 312
             ||||| |||||||||   ||||||||||||||||| ||||| |||||||||||||| |||
Sbjct: 24442 actgatgcagaaaaaacagaggttggagaaatagacacaagggctccttttgaatccgtc 24383

                                                                         
Query: 313   aaagctgccgtaagcttatttggtgaagtaaggttttcatctgacaaatcagctgcgaga 372
             |||||||| |||||||||||||| |||||  | ||||||||||||||||||||||| || 
Sbjct: 24382 aaagctgcagtaagcttatttggggaagttcgattttcatctgacaaatcagctgcaagg 24323

                                     
Query: 373   aagccaaaggctcctcaagcagag 396
             ||||||||| ||||||| ||||||
Sbjct: 24322 aagccaaagcctcctcaggcagag 24299



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 127/154 (82%)
 Strand = Plus / Minus

                                                                         
Query: 401   tgttagctaaggagaccgaacttcatttggcccagaaagagttgaataaatataaggaac 460
             |||||||||||||||| ||||| || ||||||||||||||||| |||||||| ||||| |
Sbjct: 20501 tgttagctaaggagacagaactgcacttggcccagaaagagttaaataaatacaaggatc 20442

                                                                         
Query: 461   aactgagtaatgctgaaactgccagactacaggccctctctgagttggagaaagctagaa 520
             | || |  |||||||| ||  ||||| | || ||  | |||||| ||||||||||||  |
Sbjct: 20441 agctcaacaatgctgagacaaccagagtgcaagcgttatctgagctggagaaagctaaga 20382

                                               
Query: 521   aaactgttgatgaactaactactaagctggatgc 554
             |||||||||| || || || | ||||||||||||
Sbjct: 20381 aaactgttgaggacctgaccaataagctggatgc 20348
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>gb|AC134246.4| Mus musculus BAC clone RP23-199B2 from 3, complete sequence
          Length = 206439

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 164   cactggtcctcacctctctctgcgcatct 192
             ||||||||||| |||||||||||||||||
Sbjct: 34492 cactggtcctcccctctctctgcgcatct 34520
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>gb|AC145168.5| Mus musculus BAC clone RP23-398K14 from 3, complete sequence
          Length = 217058

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                           
Query: 164    cactggtcctcacctctctctgcgcatct 192
              ||||||||||| |||||||||||||||||
Sbjct: 195489 cactggtcctcccctctctctgcgcatct 195517
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>ref|NM_124968.1| Arabidopsis thaliana unknown protein AT5G55860 mRNA, complete cds
          Length = 1950

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                       
Query: 421 cttcatttggcccagaaagagttgaataaatataaggaacaactgagtaatgctgaaact 480
           ||||| ||||| ||||||||||||||||| |  |||||||| || |  ||||||||||||
Sbjct: 202 cttcacttggctcagaaagagttgaataagttgaaggaacagcttaagaatgctgaaact 261



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                           
Query: 269 tggaggttggagaaatagatacaagagctccttttgaatctgtcaaag 316
           ||||||||||||| || || ||||| ||||||||| ||||||| ||||
Sbjct: 50  tggaggttggagagattgacacaagtgctccttttcaatctgttaaag 97
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>gb|AY735732.1| Arabidopsis thaliana hypothetical protein AT5G55860 mRNA, complete
           cds
          Length = 2498

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                       
Query: 421 cttcatttggcccagaaagagttgaataaatataaggaacaactgagtaatgctgaaact 480
           ||||| ||||| ||||||||||||||||| |  |||||||| || |  ||||||||||||
Sbjct: 494 cttcacttggctcagaaagagttgaataagttgaaggaacagcttaagaatgctgaaact 553



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                           
Query: 269 tggaggttggagaaatagatacaagagctccttttgaatctgtcaaag 316
           ||||||||||||| || || ||||| ||||||||| ||||||| ||||
Sbjct: 342 tggaggttggagagattgacacaagtgctccttttcaatctgttaaag 389
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>gb|DQ056724.1| Arabidopsis thaliana hypothetical protein (At5g55860) mRNA,
           complete cds
          Length = 1950

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                       
Query: 421 cttcatttggcccagaaagagttgaataaatataaggaacaactgagtaatgctgaaact 480
           ||||| ||||| ||||||||||||||||| |  |||||||| || |  ||||||||||||
Sbjct: 202 cttcacttggctcagaaagagttgaataagttgaaggaacagcttaagaatgctgaaact 261



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                           
Query: 269 tggaggttggagaaatagatacaagagctccttttgaatctgtcaaag 316
           ||||||||||||| || || ||||| ||||||||| ||||||| ||||
Sbjct: 50  tggaggttggagagattgacacaagtgctccttttcaatctgttaaag 97
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>dbj|AB118020.1| Oryza sativa (japonica cultivar-group) bip134 mRNA for BRI1-KD
           interacting protein 134, partial cds
          Length = 526

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 499 tctgagttggagaaagctagaaaaactgttgatgaactaactactaagctggatgc 554
           |||||| ||||||||||||  ||||||||||| || || || | ||||||||||||
Sbjct: 38  tctgagctggagaaagctaagaaaactgttgaggacctgaccaataagctggatgc 93
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>dbj|AB018120.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MWJ3
          Length = 42356

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                         
Query: 421   cttcatttggcccagaaagagttgaataaatataaggaacaactgagtaatgctgaaact 480
             ||||| ||||| ||||||||||||||||| |  |||||||| || |  ||||||||||||
Sbjct: 15301 cttcacttggctcagaaagagttgaataagttgaaggaacagcttaagaatgctgaaact 15360



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                             
Query: 269   tggaggttggagaaatagatacaagagctccttttgaatctgtcaaag 316
             ||||||||||||| || || ||||| ||||||||| ||||||| ||||
Sbjct: 15078 tggaggttggagagattgacacaagtgctccttttcaatctgttaaag 15125
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>gb|AC126807.4| Mus musculus BAC clone RP23-306D4 from chromosome 18, complete sequence
          Length = 244566

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 526    gttgatgaactaactactaagc 547
              ||||||||||||||||||||||
Sbjct: 241424 gttgatgaactaactactaagc 241403
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>gb|AC134856.3| Mus musculus BAC clone RP23-291B16 from 18, complete sequence
          Length = 210961

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 526    gttgatgaactaactactaagc 547
              ||||||||||||||||||||||
Sbjct: 172303 gttgatgaactaactactaagc 172324
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>emb|AL773526.11| Mouse DNA sequence from clone RP23-181M13 on chromosome X, complete
             sequence
          Length = 175563

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 210   tagtagtacagtaaatatggctatgaaagt 239
             ||||||||||||||| |||| |||||||||
Sbjct: 23631 tagtagtacagtaaacatggatatgaaagt 23660
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>ref|NM_101087.1| Arabidopsis thaliana unknown protein AT1G12150 mRNA, complete cds
          Length = 1647

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                       
Query: 269 tggaggttggagaaatagatacaagagctccttttgaatctgtcaaagctgccgtaagct 328
           ||||||| ||||||||||| |||||||| || ||  |||| || |||||||| || ||||
Sbjct: 47  tggaggtgggagaaatagacacaagagcaccgttccaatcggtgaaagctgcggtgagct 106

            
Query: 329 t 329
           |
Sbjct: 107 t 107
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>gb|AC154314.2| Mus musculus BAC clone RP23-347J22 from chromosome 13, complete
             sequence
          Length = 189556

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 516   tagaaaaactgttgatgaact 536
             |||||||||||||||||||||
Sbjct: 45529 tagaaaaactgttgatgaact 45509
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>ref|NM_145469.2| Mus musculus NIPA-like domain containing 2 (Npal2), mRNA
          Length = 3827

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 421 cttcatttggcccagaaagag 441
           |||||||||||||||||||||
Sbjct: 231 cttcatttggcccagaaagag 251
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>gb|AC130713.4| Mus musculus BAC clone RP23-316K10 from chromosome 15, complete
             sequence
          Length = 192020

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 421   cttcatttggcccagaaagag 441
             |||||||||||||||||||||
Sbjct: 92305 cttcatttggcccagaaagag 92325
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>gb|BC058207.1| Mus musculus NIPA-like domain containing 2, mRNA (cDNA clone
           MGC:67808 IMAGE:5361417), complete cds
          Length = 1884

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 421 cttcatttggcccagaaagag 441
           |||||||||||||||||||||
Sbjct: 396 cttcatttggcccagaaagag 416
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>gb|BC030399.1| Mus musculus NIPA-like domain containing 2, mRNA (cDNA clone
           MGC:40693 IMAGE:4166825), complete cds
          Length = 2252

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 421 cttcatttggcccagaaagag 441
           |||||||||||||||||||||
Sbjct: 747 cttcatttggcccagaaagag 767
to top
>gb|BC016107.1| Mus musculus NIPA-like domain containing 2, mRNA (cDNA clone
           MGC:27692 IMAGE:4921508), complete cds
          Length = 1742

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 421 cttcatttggcccagaaagag 441
           |||||||||||||||||||||
Sbjct: 253 cttcatttggcccagaaagag 273
to top
>gb|AC118463.2| Homo sapiens chromosome 5 clone RP11-60F22, complete sequence
          Length = 98082

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 434   agaaagagttgaataaatataagga 458
             ||||||| |||||||||||||||||
Sbjct: 47298 agaaagaattgaataaatataagga 47274
to top
>gb|AC114965.2| Homo sapiens chromosome 5 clone RP11-28P24, complete sequence
          Length = 66471

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 434  agaaagagttgaataaatataagga 458
            ||||||| |||||||||||||||||
Sbjct: 2807 agaaagaattgaataaatataagga 2783
to top
>dbj|AK132530.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched
           library, clone:4732496M09 product:hypothetical protein,
           full insert sequence
          Length = 3243

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 421 cttcatttggcccagaaagag 441
           |||||||||||||||||||||
Sbjct: 258 cttcatttggcccagaaagag 278
to top
>gb|AC131108.3| Mus musculus BAC clone RP23-351K24 from chromosome 16, complete
             sequence
          Length = 175409

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 95    ccctttctctctggcctctcc 115
             |||||||||||||||||||||
Sbjct: 43666 ccctttctctctggcctctcc 43686
to top
>dbj|AK079085.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length
           enriched library, clone:9330161F08 product:hypothetical
           protein, full insert sequence
          Length = 2146

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 421 cttcatttggcccagaaagag 441
           |||||||||||||||||||||
Sbjct: 663 cttcatttggcccagaaagag 683
to top
>dbj|AK038556.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length
           enriched library, clone:A230038J23 product:hypothetical
           protein, full insert sequence
          Length = 3493

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 421 cttcatttggcccagaaagag 441
           |||||||||||||||||||||
Sbjct: 371 cttcatttggcccagaaagag 391
to top
>dbj|AK034282.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched
            library, clone:9330172G07 product:unclassifiable, full
            insert sequence
          Length = 2817

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 516  tagaaaaactgttgatgaact 536
            |||||||||||||||||||||
Sbjct: 1895 tagaaaaactgttgatgaact 1875
to top
>dbj|AK033975.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length
           enriched library, clone:9330131F17 product:hypothetical
           protein, full insert sequence
          Length = 3827

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 421 cttcatttggcccagaaagag 441
           |||||||||||||||||||||
Sbjct: 231 cttcatttggcccagaaagag 251
to top
>gb|AC022522.2|AC022522 Arabidopsis thaliana chromosome I BAC T28K15 genomic sequence, complete
             sequence
          Length = 88643

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                         
Query: 269   tggaggttggagaaatagatacaagagctccttttgaatctgtcaaagctgccgtaagct 328
             ||||||| ||||||||||| |||||||| || ||  |||| || |||||||| || ||||
Sbjct: 47243 tggaggtgggagaaatagacacaagagcaccgttccaatcggtgaaagctgcggtgagct 47302

              
Query: 329   t 329
             |
Sbjct: 47303 t 47303
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>ref|XM_343227.2| PREDICTED: Rattus norvegicus similar to RIKEN cDNA 9330161F08
           (LOC362899), mRNA
          Length = 2196

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 421 cttcatttggcccagaaagag 441
           |||||||||||||||||||||
Sbjct: 714 cttcatttggcccagaaagag 734
to top
>gb|AC140293.4| Mus musculus BAC clone RP24-328A10 from 13, complete sequence
          Length = 188473

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 516    tagaaaaactgttgatgaact 536
              |||||||||||||||||||||
Sbjct: 187615 tagaaaaactgttgatgaact 187595
to top
>gb|AC140933.1| Gallus gallus BAC clone TAM31-60P10 from chromosome ul, complete
             sequence
          Length = 119242

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 217   acagtaaatatggctatgaaa 237
             |||||||||||||||||||||
Sbjct: 15081 acagtaaatatggctatgaaa 15061
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>gb|AC169677.2| Mus musculus BAC clone RP23-442J18 from chromosome 8, complete sequence
          Length = 225815

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 95     ccctttctctctggcctctc 114
              ||||||||||||||||||||
Sbjct: 114311 ccctttctctctggcctctc 114292
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>gb|AC168206.7| Mus musculus chromosome 1, clone RP23-17B20, complete sequence
          Length = 245358

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 450    atataaggaacaactgagta 469
              ||||||||||||||||||||
Sbjct: 157893 atataaggaacaactgagta 157912
to top
>gb|BT016569.1| Zea mays clone Contig402 mRNA sequence
          Length = 719

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 44  ccccaacaagccccccaagtcccc 67
           |||||| |||||||||||||||||
Sbjct: 528 ccccaagaagccccccaagtcccc 551
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>gb|BC021505.1| Mus musculus pleckstrin homology domain containing, family A member
            5, mRNA (cDNA clone MGC:38455 IMAGE:5347087), complete
            cds
          Length = 2856

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 292  agagctccttttgaatctgt 311
            ||||||||||||||||||||
Sbjct: 1035 agagctccttttgaatctgt 1016
to top
>gb|BC033481.1| Mus musculus pleckstrin homology domain containing, family A member
            5, mRNA (cDNA clone MGC:36910 IMAGE:4945488), complete
            cds
          Length = 3685

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 292  agagctccttttgaatctgt 311
            ||||||||||||||||||||
Sbjct: 1758 agagctccttttgaatctgt 1739
to top
>gb|BC014853.1| Mus musculus pleckstrin homology domain containing, family A member
            5, mRNA (cDNA clone MGC:11882 IMAGE:3598156), complete
            cds
          Length = 3167

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 292  agagctccttttgaatctgt 311
            ||||||||||||||||||||
Sbjct: 1159 agagctccttttgaatctgt 1140
to top
>gb|AC099582.7| Mus musculus chromosome 1, clone RP23-188D7, complete sequence
          Length = 192016

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 450    atataaggaacaactgagta 469
              ||||||||||||||||||||
Sbjct: 121111 atataaggaacaactgagta 121092
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>gb|AC140478.2| Mus musculus BAC clone RP24-149A3 from chromosome 6, complete sequence
          Length = 162440

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 292   agagctccttttgaatctgt 311
             ||||||||||||||||||||
Sbjct: 37071 agagctccttttgaatctgt 37090
to top
>gb|AY557662.1| Saccharomyces cerevisiae clone FLH001571.01X YDR079W gene, complete
           cds
          Length = 336

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 272 aggttggagaaatagatacaagag 295
           |||||||||||| |||||||||||
Sbjct: 244 aggttggagaaaaagatacaagag 267
to top
>ref|XM_980433.1| PREDICTED: Mus musculus hypothetical protein LOC665940 (LOC665940),
           mRNA
          Length = 606

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 71  gccgccgccggccggcaaccccagccct 98
           |||||||||||||||||||  |||||||
Sbjct: 373 gccgccgccggccggcaacagcagccct 400
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>ref|XM_981247.1| PREDICTED: Mus musculus hypothetical protein LOC670430 (LOC670430),
           mRNA
          Length = 606

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 71  gccgccgccggccggcaaccccagccct 98
           |||||||||||||||||||  |||||||
Sbjct: 373 gccgccgccggccggcaacagcagccct 400
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>ref|XM_992967.1| PREDICTED: Mus musculus hypothetical protein LOC676794 (LOC676794),
           mRNA
          Length = 606

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 71  gccgccgccggccggcaaccccagccct 98
           |||||||||||||||||||  |||||||
Sbjct: 373 gccgccgccggccggcaacagcagccct 400
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>gb|AC140029.19| Medicago truncatula clone mth2-20g24, complete sequence
          Length = 124043

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 324   aagcttatttggtgaagtaa 343
             ||||||||||||||||||||
Sbjct: 19008 aagcttatttggtgaagtaa 19027
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>gb|BC031390.1| Mus musculus mRNA similar to hypothetical protein MGC38455 (cDNA
            clone IMAGE:4953424)
          Length = 2975

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 292  agagctccttttgaatctgt 311
            ||||||||||||||||||||
Sbjct: 1189 agagctccttttgaatctgt 1170
to top
>emb|Z46796.1|SC8554 S.cerevisiae chromosome IV cosmid 8554
          Length = 38760

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 272   aggttggagaaatagatacaagag 295
             |||||||||||| |||||||||||
Sbjct: 19176 aggttggagaaaaagatacaagag 19199
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>emb|X82086.1|SCCHROIV S.cerevisiae DNA for right arm of chromosome IV
          Length = 32821

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 272   aggttggagaaatagatacaagag 295
             |||||||||||| |||||||||||
Sbjct: 13535 aggttggagaaaaagatacaagag 13558
to top
>emb|X52382.1|SAEF1A Sulfolobus acidocaldarius S7, EF-1a, S10 and tRNA-Ser genes for
           ribosomal protein S7, elongation factor-1-alpha,
           ribosomal protein S10 and transfer RNA-Ser respectively
          Length = 2640

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 195 tgcttgcatataatatagta 214
           ||||||||||||||||||||
Sbjct: 428 tgcttgcatataatatagta 447
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>emb|BX842644.1| Mycoplasma mycoides subsp. mycoides SC genomic DNA, complete
            sequence; segment 3/4
          Length = 349402

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 519  aaaaactgttgatgaactaa 538
            ||||||||||||||||||||
Sbjct: 7299 aaaaactgttgatgaactaa 7318
to top
>gb|AC161890.4| Mus musculus 6 BAC RP23-356P12 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 243990

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 292   agagctccttttgaatctgt 311
             ||||||||||||||||||||
Sbjct: 16021 agagctccttttgaatctgt 16040
to top
>gb|CP000077.1| Sulfolobus acidocaldarius DSM 639, complete genome
          Length = 2225959

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 195    tgcttgcatataatatagta 214
              ||||||||||||||||||||
Sbjct: 544738 tgcttgcatataatatagta 544719
to top
>gb|AC099780.2| Homo sapiens chromosome 3 clone RP11-769M23, complete sequence
          Length = 193793

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 209    atagtagtacagtaaatatg 228
              ||||||||||||||||||||
Sbjct: 130589 atagtagtacagtaaatatg 130570
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>dbj|AK148428.1| Mus musculus B16 F10Y cells cDNA, RIKEN full-length enriched
          library, clone:G370145L06 product:mitogen-activated
          protein kinase associated protein 1, full insert
          sequence
          Length = 4090

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                      
Query: 71 gccgccgccggccggcaaccccagccct 98
          |||||||||||||||||||  |||||||
Sbjct: 59 gccgccgccggccggcaacagcagccct 32
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>dbj|AK042154.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length
          enriched library, clone:A630064D11 product:Ras
          inhibitor (clone JC310) (fragment) homolog [Homo
          sapiens], full insert sequence
          Length = 1633

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                      
Query: 71 gccgccgccggccggcaaccccagccct 98
          |||||||||||||||||||  |||||||
Sbjct: 60 gccgccgccggccggcaacagcagccct 33
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 60       aagtcccctctgccgccgcc 79
                ||||||||||||||||||||
Sbjct: 12848334 aagtcccctctgccgccgcc 12848353
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>dbj|AP005325.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0710F09
          Length = 198867

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 60     aagtcccctctgccgccgcc 79
              ||||||||||||||||||||
Sbjct: 106458 aagtcccctctgccgccgcc 106477
to top
>dbj|AK129423.1| Mus musculus mRNA for mKIAA1686 protein
          Length = 4875

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 292  agagctccttttgaatctgt 311
            ||||||||||||||||||||
Sbjct: 2404 agagctccttttgaatctgt 2385
to top
>emb|BX255885.5| Zebrafish DNA sequence from clone CH211-213M12 in linkage group 4,
              complete sequence
          Length = 134701

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 264    aaaattggaggttggagaaa 283
              ||||||||||||||||||||
Sbjct: 133189 aaaattggaggttggagaaa 133170
to top
>emb|BX248410.4| Zebrafish DNA sequence from clone DKEY-65M5 in linkage group 4,
           complete sequence
          Length = 250665

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 264 aaaattggaggttggagaaa 283
           ||||||||||||||||||||
Sbjct: 488 aaaattggaggttggagaaa 469
to top
>gb|AF079980.1|AF079980 Microtus ochrogaster oxytocin receptor (OTR) gene, partial cds and
            promoter sequence
          Length = 2467

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 61   agtcccctctgccgccgccg 80
            ||||||||||||||||||||
Sbjct: 2423 agtcccctctgccgccgccg 2404
to top
>gb|AF152364.1|AF152364 Homo sapiens constitutive fragile region FRA3B sequence
          Length = 170452

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 209   atagtagtacagtaaatatg 228
             ||||||||||||||||||||
Sbjct: 47095 atagtagtacagtaaatatg 47076
to top
>emb|Z74375.1|SCYDR079W S.cerevisiae chromosome IV reading frame ORF YDR079w
          Length = 1138

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 272 aggttggagaaatagatacaagag 295
           |||||||||||| |||||||||||
Sbjct: 438 aggttggagaaaaagatacaagag 461
to top
>ref|NM_144920.2| Mus musculus pleckstrin homology domain containing, family A member 5
            (Plekha5), mRNA
          Length = 3685

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 292  agagctccttttgaatctgt 311
            ||||||||||||||||||||
Sbjct: 1758 agagctccttttgaatctgt 1739
to top
>gb|BC096618.1| Mus musculus mitogen-activated protein kinase associated protein
          1, mRNA (cDNA clone MGC:106246 IMAGE:6392317), complete
          cds
          Length = 2424

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                      
Query: 71 gccgccgccggccggcaaccccagccct 98
          |||||||||||||||||||  |||||||
Sbjct: 43 gccgccgccggccggcaacagcagccct 16
to top
>gb|AY653733.1| Acanthamoeba polyphaga mimivirus, complete genome
          Length = 1181404

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 519    aaaaactgttgatgaactaa 538
              ||||||||||||||||||||
Sbjct: 602292 aaaaactgttgatgaactaa 602273
to top
>gb|U91943.1|SCU91943 Saccharomyces cerevisiae cytochrome c oxidase-specific assembly
           factor (PET100) gene, complete cds
          Length = 336

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 272 aggttggagaaatagatacaagag 295
           |||||||||||| |||||||||||
Sbjct: 244 aggttggagaaaaagatacaagag 267
to top
>emb|AL808102.8| Mouse DNA sequence from clone RP23-192O6 on chromosome 2, complete
             sequence
          Length = 178743

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 71    gccgccgccggccggcaaccccagccct 98
             |||||||||||||||||||  |||||||
Sbjct: 80861 gccgccgccggccggcaacagcagccct 80834
to top
>dbj|AB000223.1| Yeast DNA for Vam2p, complete cds
          Length = 5789

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 272 aggttggagaaatagatacaagag 295
           |||||||||||| |||||||||||
Sbjct: 917 aggttggagaaaaagatacaagag 940
to top
>dbj|AB014024.1| Astrephomene perforata chloroplast atpB gene for ATP synthase
           beta-subunit, strain NIES-564, partial cds
          Length = 1128

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 287 atacaagagctccttttgaatctg 310
           ||||||||||| ||||||||||||
Sbjct: 478 atacaagagctacttttgaatctg 455


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,274,570
Number of Sequences: 3902068
Number of extensions: 5274570
Number of successful extensions: 116649
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 116366
Number of HSP's gapped (non-prelim): 283
length of query: 554
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 531
effective length of database: 17,143,297,704
effective search space: 9103091080824
effective search space used: 9103091080824
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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