ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd26d22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK067286.1| Oryza sativa (japonica cultivar-group) cDNA clon... 341 2e-90
2dbj|AK059032.1| Oryza sativa (japonica cultivar-group) cDNA clon... 333 4e-88
3ref|XM_473769.1| Oryza sativa (japonica cultivar-group), predic... 327 3e-86
4gb|AY108236.1| Zea mays PCO086968 mRNA sequence 244 3e-61
5emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4,... 163 9e-37
6dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 163 9e-37
7emb|AL606683.3|OSJN00089 Oryza sativa genomic DNA, chromosome 4,... 163 9e-37
8ref|XM_467332.1| Oryza sativa (japonica cultivar-group), mRNA 135 2e-28
9gb|AY103882.1| Zea mays PCO130190 mRNA sequence 125 2e-25
10dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 82 3e-12
11dbj|AP003994.3| Oryza sativa (japonica cultivar-group) genomic D... 82 3e-12
12dbj|AP004052.3| Oryza sativa (japonica cultivar-group) genomic D... 82 3e-12
13emb|AJ005900.1|NTA005900 Nicotiana tabacum mRNA for V-ATPase sub... 60 9e-06
14gb|DQ284486.1| Solanum tuberosum clone 020G11 ATPase-like mRNA, ... 58 4e-05
15emb|AJ005899.1|NTA005899 Nicotiana tabacum mRNA for V-ATPase sub... 54 6e-04
16dbj|AK068212.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
17emb|AJ879064.1| Capsicum chinense mRNA for ATPase 50 0.009
18gb|AY149472.1| Acinetobacter baumannii strain 8399 siderophore a... 48 0.036
19gb|AC128638.34| Medicago truncatula clone mth2-36h10, complete s... 46 0.14
20gb|AC148995.2| Medicago truncatula chromosome 7 BAC clone mth2-4... 46 0.14
21ref|NM_118502.2| Arabidopsis thaliana unknown protein AT4G23710 ... 44 0.56
22ref|NM_180158.2| Arabidopsis thaliana VMA10 (VACUOLAR MEMBRANE A... 44 0.56
23ref|NM_111005.3| Arabidopsis thaliana VMA10 (VACUOLAR MEMBRANE A... 44 0.56
24emb|AL627308.20| Human DNA sequence from clone RP11-211A18 on ch... 44 0.56
25emb|AL161560.2|ATCHRIV60 Arabidopsis thaliana DNA chromosome 4, ... 44 0.56
26emb|AL035394.1|ATF9D16 Arabidopsis thaliana DNA chromosome 4, BA... 44 0.56
27gb|AY114730.1| Arabidopsis thaliana vacuolar membrane ATPase sub... 44 0.56
28gb|AY072365.1| Arabidopsis thaliana vacuolar membrane ATPase sub... 44 0.56
29emb|BX825355.1|CNS0A6BQ Arabidopsis thaliana Full-length cDNA Co... 44 0.56
30gb|BT003107.1| Arabidopsis thaliana At4g23710 mRNA, complete cds 44 0.56
31emb|AJ005901.1|ATA005901 Arabidopsis thaliana mRNA for V-ATPase ... 44 0.56
32gb|AF184068.1|AF184068 Citrus limon vacuolar membrane ATPase sub... 44 0.56
33gb|AF181688.1|AF181688 Arabidopsis thaliana vacuolar membrane AT... 44 0.56
34emb|CR715651.2|CNS0GF5B Tetraodon nigroviridis full-length cDNA 42 2.2
35gb|AC099558.2| Homo sapiens chromosome 3 clone RP11-680P23, comp... 42 2.2
36gb|AC092636.3| Homo sapiens BAC clone RP11-353K11 from 2, comple... 42 2.2
37gb|AC114480.2| Homo sapiens chromosome 3 clone RP11-755B10, comp... 42 2.2
38gb|AC140658.2| Homo sapiens chromosome 16 clone RP11-812E19, com... 40 8.7
39gb|AC125225.4| Mus musculus BAC clone RP23-36I17 from 6, complet... 40 8.7
40gb|AC121867.2| Mus musculus BAC clone RP24-115M7 from 6, complet... 40 8.7
41gb|AC119831.6| Mus musculus chromosome 9, clone RP23-281F13, com... 40 8.7
42gb|AC152348.7| Medicago truncatula clone mth2-52e17, complete se... 40 8.7
43gb|AC166997.1| Mus musculus BAC clone RP23-107H9 from chromosome... 40 8.7
44emb|AL391825.15| Human DNA sequence from clone RP11-456P18 on ch... 40 8.7
45gb|AC141587.2| Homo sapiens chromosome 16 clone RP11-1046E19, co... 40 8.7
46gb|AC140254.4| Mus musculus BAC clone RP23-467N7 from chromosome... 40 8.7
47gb|AC147018.4| Mus musculus BAC clone RP23-284H11 from chromosom... 40 8.7
48emb|BX248584.1| Blochmannia floridanus complete genome; segment 1/3 40 8.7
49gb|AC008802.7| Homo sapiens chromosome 5 clone CTD-2073O6, compl... 40 8.7
50emb|BX901917.9| Zebrafish DNA sequence from clone DKEY-32E10 in ... 40 8.7
51gb|AC160836.12| Medicago truncatula clone mth2-115l23, complete ... 40 8.7
52gb|AC106727.5| Homo sapiens 3q BAC RP11-534K3 (Roswell Park Canc... 40 8.7
53gb|AC023538.7| Homo sapiens chromosome 8, clone RP11-510I21, com... 40 8.7
54gb|AC007028.3| Homo sapiens chromosome 16 clone RP5-835P2, compl... 40 8.7
55gb|AC160052.2| Mus musculus BAC clone RP24-173L14 from chromosom... 40 8.7
56gb|AC141272.3| Homo sapiens chromosome 16 clone RP11-1415K9, com... 40 8.7
57gb|AC141248.2| Homo sapiens chromosome 16 clone RP11-1251B5, com... 40 8.7
58gb|AC092915.7| Homo sapiens 3 BAC RP11-585F20 (Roswell Park Canc... 40 8.7
59gb|AC136428.3| Homo sapiens chromosome 16 clone RP11-104C4, comp... 40 8.7
60dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 8.7
61emb|AJ438591.1|MCR438591 Mesembryanthemum crystallinum mRNA for ... 40 8.7
62ref|NG_001019.4| Homo sapiens immunoglobulin heavy locus (IGH@) ... 40 8.7
63gb|AC005337.1|AC005337 Homo sapiens chromosome 19, cosmid R25269... 40 8.7
64gb|CP000165.1| Drosophila melanogaster genomic scaffold 21100002... 40 8.7
65gb|AC135018.3| Mus musculus BAC clone RP23-124G8 from 6, complet... 40 8.7
66emb|AL355432.7|HS56F10 Homo sapiens chromosome 9 BAC RP11-56F10,... 40 8.7
67emb|AL355433.6|HS179D22 Homo sapiens chromosome 9 BAC RP11-179D2... 40 8.7
68gb|M99679.1|HUMIGH353X Human immunoglobulin heavy chain variable... 40 8.7
69dbj|AB019439.1| Homo sapiens DNA for immunoglobulin heavy-chain ... 40 8.7
70dbj|AB019438.1| Homo sapiens DNA for immunoglobulin heavy-chain ... 40 8.7 
>dbj|AK067286.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013101A22, full
           insert sequence
          Length = 622

 Score =  341 bits (172), Expect = 2e-90
 Identities = 307/352 (87%)
 Strand = Plus / Plus

                                                                       
Query: 68  cagcccaaacatggacgcaagcaggcgcccaagtggaatccagcaattgcttgctgcaga 127
           |||| |||| |||||||||| ||| |||| ||||||||||||||||||| | ||||||||
Sbjct: 32  cagcacaaagatggacgcaaacagacgccaaagtggaatccagcaattgttggctgcaga 91

                                                                       
Query: 128 gcaagatgctcagcaaattgtaaatgctgccagggctgctaaaacggcaaggcttaggaa 187
           |||||| ||||||||||| ||||||||||| |||||||| ||| |||||||||||||| |
Sbjct: 92  gcaagaggctcagcaaatagtaaatgctgctagggctgcaaaatcggcaaggcttaggca 151

                                                                       
Query: 188 agcaaaagaagaggcggagagagagatagctgagtaccgtgcgcagatggaggctgattt 247
           ||||||||| ||||| ||||| || |||||||| |||||||| |||||||||||||| ||
Sbjct: 152 agcaaaagaggaggctgagagggaaatagctgaataccgtgcccagatggaggctgaatt 211

                                                                       
Query: 248 ccagagaaagctcaccgagaccagcggtgactctggtgcaaatgtcaaacgccttgagca 307
            ||||| ||| |  | ||||  |||||||||||||||||||||||||| || ||||||||
Sbjct: 212 tcagaggaaggttgcagagagtagcggtgactctggtgcaaatgtcaagcgtcttgagca 271

                                                                       
Query: 308 agagacaaacgtaaaaattgaacagctcaagcagcaggcagcaaacatctccccagaggt 367
            ||||||   | |||||| | ||| |||||||||||||| ||||  |||||||| || ||
Sbjct: 272 ggagacagcggaaaaaatcgcacaactcaagcagcaggctgcaagtatctcccctgaagt 331

                                                               
Query: 368 gattcagatgcttctgaggcacgtcaccactgtgaagaactaaaggttgatg 419
           ||||||||||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 332 gattcagatgcttctgaggcatgtcaccactgtgaagaactaagggttgatg 383
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>dbj|AK059032.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-C05, full
           insert sequence
          Length = 652

 Score =  333 bits (168), Expect = 4e-88
 Identities = 306/352 (86%)
 Strand = Plus / Plus

                                                                       
Query: 68  cagcccaaacatggacgcaagcaggcgcccaagtggaatccagcaattgcttgctgcaga 127
           |||| |||| |||||||||| ||| |||| ||||||||||||||||||| | ||||||||
Sbjct: 65  cagcacaaagatggacgcaaacagacgccaaagtggaatccagcaattgttggctgcaga 124

                                                                       
Query: 128 gcaagatgctcagcaaattgtaaatgctgccagggctgctaaaacggcaaggcttaggaa 187
           |||||  ||||||||||| ||||||||||| |||||||| ||| |||||||||||||| |
Sbjct: 125 gcaaggggctcagcaaatagtaaatgctgctagggctgcaaaatcggcaaggcttaggca 184

                                                                       
Query: 188 agcaaaagaagaggcggagagagagatagctgagtaccgtgcgcagatggaggctgattt 247
           ||||||||| ||||| ||||| || |||||||| |||||||| |||||||||||||| ||
Sbjct: 185 agcaaaagaggaggctgagagggaaatagctgaataccgtgcccagatggaggctgaatt 244

                                                                       
Query: 248 ccagagaaagctcaccgagaccagcggtgactctggtgcaaatgtcaaacgccttgagca 307
            ||||| ||| |  | ||||  |||||||||||||||||||||||||| || ||||||||
Sbjct: 245 tcagaggaaggttgcagagagtagcggtgactctggtgcaaatgtcaagcgtcttgagca 304

                                                                       
Query: 308 agagacaaacgtaaaaattgaacagctcaagcagcaggcagcaaacatctccccagaggt 367
            ||||||   | |||||| | ||| |||||||||||||| ||||  |||||||| || ||
Sbjct: 305 ggagacagcggaaaaaatcgcacaactcaagcagcaggctgcaagtatctcccctgaagt 364

                                                               
Query: 368 gattcagatgcttctgaggcacgtcaccactgtgaagaactaaaggttgatg 419
           ||||||||||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 365 gattcagatgcttctgaggcatgtcaccactgtgaagaactaagggttgatg 416
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>ref|XM_473769.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 333

 Score =  327 bits (165), Expect = 3e-86
 Identities = 291/333 (87%)
 Strand = Plus / Plus

                                                                       
Query: 78  atggacgcaagcaggcgcccaagtggaatccagcaattgcttgctgcagagcaagatgct 137
           |||||||||| ||| |||| ||||||||||||||||||| | |||||||||||||| |||
Sbjct: 1   atggacgcaaacagacgccaaagtggaatccagcaattgttggctgcagagcaagaggct 60

                                                                       
Query: 138 cagcaaattgtaaatgctgccagggctgctaaaacggcaaggcttaggaaagcaaaagaa 197
           |||||||| ||||||||||| |||||||| ||| |||||||||||||| |||||||||| 
Sbjct: 61  cagcaaatagtaaatgctgctagggctgcaaaatcggcaaggcttaggcaagcaaaagag 120

                                                                       
Query: 198 gaggcggagagagagatagctgagtaccgtgcgcagatggaggctgatttccagagaaag 257
           ||||| ||||| || |||||||| |||||||| |||||||||||||| || ||||| |||
Sbjct: 121 gaggctgagagggaaatagctgaataccgtgcccagatggaggctgaatttcagaggaag 180

                                                                       
Query: 258 ctcaccgagaccagcggtgactctggtgcaaatgtcaaacgccttgagcaagagacaaac 317
            |  | ||||  |||||||||||||||||||||||||| || |||||||| ||||||   
Sbjct: 181 gttgcagagagtagcggtgactctggtgcaaatgtcaagcgtcttgagcaggagacagcg 240

                                                                       
Query: 318 gtaaaaattgaacagctcaagcagcaggcagcaaacatctccccagaggtgattcagatg 377
           | |||||| | ||| |||||||||||||| ||||  |||||||| || ||||||||||||
Sbjct: 241 gaaaaaatcgcacaactcaagcagcaggctgcaagtatctcccctgaagtgattcagatg 300

                                            
Query: 378 cttctgaggcacgtcaccactgtgaagaactaa 410
           ||||||||||| |||||||||||||||||||||
Sbjct: 301 cttctgaggcatgtcaccactgtgaagaactaa 333
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>gb|AY108236.1| Zea mays PCO086968 mRNA sequence
          Length = 750

 Score =  244 bits (123), Expect = 3e-61
 Identities = 279/331 (84%)
 Strand = Plus / Plus

                                                                       
Query: 78  atggacgcaagcaggcgcccaagtggaatccagcaattgcttgctgcagagcaagatgct 137
           |||||||| | |||||||| | |||| || ||||| ||||| ||||| ||||| || |||
Sbjct: 147 atggacgccaacaggcgccaaggtgggattcagcagttgctggctgcggagcaggaggct 206

                                                                       
Query: 138 cagcaaattgtaaatgctgccagggctgctaaaacggcaaggcttaggaaagcaaaagaa 197
           ||||||||||| ||||| || || ||||||||  | |||||||||||| |||| ||||| 
Sbjct: 207 cagcaaattgtgaatgcggctagagctgctaagtcagcaaggcttaggcaagcgaaagag 266

                                                                       
Query: 198 gaggcggagagagagatagctgagtaccgtgcgcagatggaggctgatttccagagaaag 257
           ||||| ||||| || ||||| || |||||||| |||||||||||||| |||||||| |||
Sbjct: 267 gaggcagagagggaaatagccgaataccgtgcccagatggaggctgagttccagaggaag 326

                                                                       
Query: 258 ctcaccgagaccagcggtgactctggtgcaaatgtcaaacgccttgagcaagagacaaac 317
            || | |||| ||| |||||||||||||| || ||||| || || ||| |||||||||  
Sbjct: 327 gtcgcagagagcagtggtgactctggtgcgaacgtcaagcgtctcgaggaagagacaacg 386

                                                                       
Query: 318 gtaaaaattgaacagctcaagcagcaggcagcaaacatctccccagaggtgattcagatg 377
           |  ||||| ||||||||||| |||||||| |||| |||||||||||| || |||||||||
Sbjct: 387 gcgaaaatcgaacagctcaaccagcaggctgcaagcatctccccagatgtcattcagatg 446

                                          
Query: 378 cttctgaggcacgtcaccactgtgaagaact 408
           ||||||||||| |||||||| ||||||||||
Sbjct: 447 cttctgaggcatgtcaccaccgtgaagaact 477
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>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02,
             complete sequence
          Length = 166804

 Score =  163 bits (82), Expect = 9e-37
 Identities = 133/150 (88%)
 Strand = Plus / Minus

                                                                         
Query: 270   agcggtgactctggtgcaaatgtcaaacgccttgagcaagagacaaacgtaaaaattgaa 329
             |||||||||||||||||||||||||| || |||||||| ||||||   | |||||| | |
Sbjct: 42480 agcggtgactctggtgcaaatgtcaagcgtcttgagcaggagacagcggaaaaaatcgca 42421

                                                                         
Query: 330   cagctcaagcagcaggcagcaaacatctccccagaggtgattcagatgcttctgaggcac 389
             || |||||||||||||| ||||  |||||||| || ||||||||||||||||||||||| 
Sbjct: 42420 caactcaagcagcaggctgcaagtatctcccctgaagtgattcagatgcttctgaggcat 42361

                                           
Query: 390   gtcaccactgtgaagaactaaaggttgatg 419
             ||||||||||||||||||||| ||||||||
Sbjct: 42360 gtcaccactgtgaagaactaagggttgatg 42331



 Score =  115 bits (58), Expect = 2e-22
 Identities = 88/98 (89%)
 Strand = Plus / Minus

                                                                         
Query: 68    cagcccaaacatggacgcaagcaggcgcccaagtggaatccagcaattgcttgctgcaga 127
             |||| |||| |||||||||| ||| |||| ||||||||||||||||||| | ||||||||
Sbjct: 43208 cagcacaaagatggacgcaaacagacgccaaagtggaatccagcaattgttggctgcaga 43149

                                                   
Query: 128   gcaagatgctcagcaaattgtaaatgctgccagggctg 165
             |||||| ||||||||||| ||||||||||| |||||||
Sbjct: 43148 gcaagaggctcagcaaatagtaaatgctgctagggctg 43111



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 73/82 (89%)
 Strand = Plus / Minus

                                                                         
Query: 172   cggcaaggcttaggaaagcaaaagaagaggcggagagagagatagctgagtaccgtgcgc 231
             |||||||||||||| |||||||||| ||||| ||||| || |||||||| |||||||| |
Sbjct: 42676 cggcaaggcttaggcaagcaaaagaggaggctgagagggaaatagctgaataccgtgccc 42617

                                   
Query: 232   agatggaggctgatttccagag 253
             ||||||||||||| || |||||
Sbjct: 42616 agatggaggctgaatttcagag 42595
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  163 bits (82), Expect = 9e-37
 Identities = 133/150 (88%)
 Strand = Plus / Minus

                                                                            
Query: 270      agcggtgactctggtgcaaatgtcaaacgccttgagcaagagacaaacgtaaaaattgaa 329
                |||||||||||||||||||||||||| || |||||||| ||||||   | |||||| | |
Sbjct: 30409102 agcggtgactctggtgcaaatgtcaagcgtcttgagcaggagacagcggaaaaaatcgca 30409043

                                                                            
Query: 330      cagctcaagcagcaggcagcaaacatctccccagaggtgattcagatgcttctgaggcac 389
                || |||||||||||||| ||||  |||||||| || ||||||||||||||||||||||| 
Sbjct: 30409042 caactcaagcagcaggctgcaagtatctcccctgaagtgattcagatgcttctgaggcat 30408983

                                              
Query: 390      gtcaccactgtgaagaactaaaggttgatg 419
                ||||||||||||||||||||| ||||||||
Sbjct: 30408982 gtcaccactgtgaagaactaagggttgatg 30408953



 Score =  115 bits (58), Expect = 2e-22
 Identities = 88/98 (89%)
 Strand = Plus / Minus

                                                                            
Query: 68       cagcccaaacatggacgcaagcaggcgcccaagtggaatccagcaattgcttgctgcaga 127
                |||| |||| |||||||||| ||| |||| ||||||||||||||||||| | ||||||||
Sbjct: 30409830 cagcacaaagatggacgcaaacagacgccaaagtggaatccagcaattgttggctgcaga 30409771

                                                      
Query: 128      gcaagatgctcagcaaattgtaaatgctgccagggctg 165
                |||||| ||||||||||| ||||||||||| |||||||
Sbjct: 30409770 gcaagaggctcagcaaatagtaaatgctgctagggctg 30409733



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 73/82 (89%)
 Strand = Plus / Minus

                                                                            
Query: 172      cggcaaggcttaggaaagcaaaagaagaggcggagagagagatagctgagtaccgtgcgc 231
                |||||||||||||| |||||||||| ||||| ||||| || |||||||| |||||||| |
Sbjct: 30409298 cggcaaggcttaggcaagcaaaagaggaggctgagagggaaatagctgaataccgtgccc 30409239

                                      
Query: 232      agatggaggctgatttccagag 253
                ||||||||||||| || |||||
Sbjct: 30409238 agatggaggctgaatttcagag 30409217
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>emb|AL606683.3|OSJN00089 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0083N12,
              complete sequence
          Length = 160989

 Score =  163 bits (82), Expect = 9e-37
 Identities = 133/150 (88%)
 Strand = Plus / Minus

                                                                          
Query: 270    agcggtgactctggtgcaaatgtcaaacgccttgagcaagagacaaacgtaaaaattgaa 329
              |||||||||||||||||||||||||| || |||||||| ||||||   | |||||| | |
Sbjct: 158998 agcggtgactctggtgcaaatgtcaagcgtcttgagcaggagacagcggaaaaaatcgca 158939

                                                                          
Query: 330    cagctcaagcagcaggcagcaaacatctccccagaggtgattcagatgcttctgaggcac 389
              || |||||||||||||| ||||  |||||||| || ||||||||||||||||||||||| 
Sbjct: 158938 caactcaagcagcaggctgcaagtatctcccctgaagtgattcagatgcttctgaggcat 158879

                                            
Query: 390    gtcaccactgtgaagaactaaaggttgatg 419
              ||||||||||||||||||||| ||||||||
Sbjct: 158878 gtcaccactgtgaagaactaagggttgatg 158849



 Score =  115 bits (58), Expect = 2e-22
 Identities = 88/98 (89%)
 Strand = Plus / Minus

                                                                          
Query: 68     cagcccaaacatggacgcaagcaggcgcccaagtggaatccagcaattgcttgctgcaga 127
              |||| |||| |||||||||| ||| |||| ||||||||||||||||||| | ||||||||
Sbjct: 159726 cagcacaaagatggacgcaaacagacgccaaagtggaatccagcaattgttggctgcaga 159667

                                                    
Query: 128    gcaagatgctcagcaaattgtaaatgctgccagggctg 165
              |||||| ||||||||||| ||||||||||| |||||||
Sbjct: 159666 gcaagaggctcagcaaatagtaaatgctgctagggctg 159629



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 73/82 (89%)
 Strand = Plus / Minus

                                                                          
Query: 172    cggcaaggcttaggaaagcaaaagaagaggcggagagagagatagctgagtaccgtgcgc 231
              |||||||||||||| |||||||||| ||||| ||||| || |||||||| |||||||| |
Sbjct: 159194 cggcaaggcttaggcaagcaaaagaggaggctgagagggaaatagctgaataccgtgccc 159135

                                    
Query: 232    agatggaggctgatttccagag 253
              ||||||||||||| || |||||
Sbjct: 159134 agatggaggctgaatttcagag 159113
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>ref|XM_467332.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 525

 Score =  135 bits (68), Expect = 2e-28
 Identities = 182/220 (82%)
 Strand = Plus / Plus

                                                                       
Query: 189 gcaaaagaagaggcggagagagagatagctgagtaccgtgcgcagatggaggctgatttc 248
           |||||||| ||||| |||||||| ||||||||||||||||| |||||||| ||||| |||
Sbjct: 304 gcaaaagaggaggctgagagagaaatagctgagtaccgtgctcagatggaagctgagttc 363

                                                                       
Query: 249 cagagaaagctcaccgagaccagcggtgactctggtgcaaatgtcaaacgccttgagcaa 308
           ||||| ||| |  | ||||  |||||||| ||||||||||| || ||||| |||||||||
Sbjct: 364 cagaggaaggttgcggagagtagcggtgattctggtgcaaacgtaaaacggcttgagcaa 423

                                                                       
Query: 309 gagacaaacgtaaaaattgaacagctcaagcagcaggcagcaaacatctccccagaggtg 368
           || ||  ||   |||||||  || || ||| ||||||| |||||  ||||||| || |||
Sbjct: 424 gaaactgacacgaaaattgcgcaactgaaggagcaggctgcaaatgtctcccctgaagtg 483

                                                   
Query: 369 attcagatgcttctgaggcacgtcaccactgtgaagaact 408
           || ||||||||||| ||||| || ||||| ||||||||||
Sbjct: 484 atccagatgcttcttaggcatgtaaccaccgtgaagaact 523



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                     
Query: 100 gtggaatccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgc 157
           ||||||| ||||||||  | |||||||||||||| ||||| || ||||| ||||||||
Sbjct: 238 gtggaattcagcaattattggctgcagagcaagaagctcaacagattgttaatgctgc 295
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>gb|AY103882.1| Zea mays PCO130190 mRNA sequence
          Length = 760

 Score =  125 bits (63), Expect = 2e-25
 Identities = 264/331 (79%)
 Strand = Plus / Plus

                                                                       
Query: 78  atggacgcaagcaggcgcccaagtggaatccagcaattgcttgctgcagagcaagatgct 137
           |||||||| | ||||||||  ||||| |||||||| ||||| ||||| ||||| || |||
Sbjct: 142 atggacgcgaacaggcgccagagtgggatccagcagttgctggctgcggagcaggaggct 201

                                                                       
Query: 138 cagcaaattgtaaatgctgccagggctgctaaaacggcaaggcttaggaaagcaaaagaa 197
           ||||||||||| ||||| || || ||||| ||  | || ||||| ||| |||||||||| 
Sbjct: 202 cagcaaattgtgaatgccgctagagctgccaagtcagcgaggctcaggcaagcaaaagag 261

                                                                       
Query: 198 gaggcggagagagagatagctgagtaccgtgcgcagatggaggctgatttccagagaaag 257
           ||||| ||| | || ||||| || |||||||| |||||||||||||| || ||||| |||
Sbjct: 262 gaggctgagcgggaaatagccgaataccgtgcccagatggaggctgagtttcagaggaag 321

                                                                       
Query: 258 ctcaccgagaccagcggtgactctggtgcaaatgtcaaacgccttgagcaagagacaaac 317
            |  | |||| |||||| ||||| |||||||| ||||| || || ||| |||| ||    
Sbjct: 322 gttgcagagagcagcggcgactccggtgcaaacgtcaagcgtctcgaggaagaaacggcg 381

                                                                       
Query: 318 gtaaaaattgaacagctcaagcagcaggcagcaaacatctccccagaggtgattcagatg 377
           |  || || || || ||||  ||||||||  ||| ||||||||| || || |||||||||
Sbjct: 382 gcgaagatcgagcaactcacccagcaggccacaagcatctccccggatgtcattcagatg 441

                                          
Query: 378 cttctgaggcacgtcaccactgtgaagaact 408
           |||||| |||| |||||||| || |||||||
Sbjct: 442 cttctgcggcatgtcaccaccgtcaagaact 472
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 59/65 (90%)
 Strand = Plus / Minus

                                                                            
Query: 189      gcaaaagaagaggcggagagagagatagctgagtaccgtgcgcagatggaggctgatttc 248
                |||||||| ||||| |||||||| ||||||||||||||||| |||||||| ||||| |||
Sbjct: 28917561 gcaaaagaggaggctgagagagaaatagctgagtaccgtgctcagatggaagctgagttc 28917502

                     
Query: 249      cagag 253
                |||||
Sbjct: 28917501 cagag 28917497



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 114/139 (82%)
 Strand = Plus / Minus

                                                                            
Query: 270      agcggtgactctggtgcaaatgtcaaacgccttgagcaagagacaaacgtaaaaattgaa 329
                |||||||| ||||||||||| || ||||| ||||||||||| ||  ||   |||||||  
Sbjct: 28917405 agcggtgattctggtgcaaacgtaaaacggcttgagcaagaaactgacacgaaaattgcg 28917346

                                                                            
Query: 330      cagctcaagcagcaggcagcaaacatctccccagaggtgattcagatgcttctgaggcac 389
                || || ||| ||||||| |||||  ||||||| || ||||| ||||||||||| ||||| 
Sbjct: 28917345 caactgaaggagcaggctgcaaatgtctcccctgaagtgatccagatgcttcttaggcat 28917286

                                   
Query: 390      gtcaccactgtgaagaact 408
                || ||||| ||||||||||
Sbjct: 28917285 gtaaccaccgtgaagaact 28917267



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                          
Query: 100      gtggaatccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgc 157
                ||||||| ||||||||  | |||||||||||||| ||||| || ||||| ||||||||
Sbjct: 28918325 gtggaattcagcaattattggctgcagagcaagaagctcaacagattgttaatgctgc 28918268
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>dbj|AP003994.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1111_E07
          Length = 123613

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 59/65 (90%)
 Strand = Plus / Minus

                                                                          
Query: 189    gcaaaagaagaggcggagagagagatagctgagtaccgtgcgcagatggaggctgatttc 248
              |||||||| ||||| |||||||| ||||||||||||||||| |||||||| ||||| |||
Sbjct: 110253 gcaaaagaggaggctgagagagaaatagctgagtaccgtgctcagatggaagctgagttc 110194

                   
Query: 249    cagag 253
              |||||
Sbjct: 110193 cagag 110189



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 114/139 (82%)
 Strand = Plus / Minus

                                                                          
Query: 270    agcggtgactctggtgcaaatgtcaaacgccttgagcaagagacaaacgtaaaaattgaa 329
              |||||||| ||||||||||| || ||||| ||||||||||| ||  ||   |||||||  
Sbjct: 110097 agcggtgattctggtgcaaacgtaaaacggcttgagcaagaaactgacacgaaaattgcg 110038

                                                                          
Query: 330    cagctcaagcagcaggcagcaaacatctccccagaggtgattcagatgcttctgaggcac 389
              || || ||| ||||||| |||||  ||||||| || ||||| ||||||||||| ||||| 
Sbjct: 110037 caactgaaggagcaggctgcaaatgtctcccctgaagtgatccagatgcttcttaggcat 109978

                                 
Query: 390    gtcaccactgtgaagaact 408
              || ||||| ||||||||||
Sbjct: 109977 gtaaccaccgtgaagaact 109959



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                        
Query: 100    gtggaatccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgc 157
              ||||||| ||||||||  | |||||||||||||| ||||| || ||||| ||||||||
Sbjct: 111017 gtggaattcagcaattattggctgcagagcaagaagctcaacagattgttaatgctgc 110960
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>dbj|AP004052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
           BAC clone:OJ1218_D07
          Length = 114511

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 59/65 (90%)
 Strand = Plus / Minus

                                                                       
Query: 189 gcaaaagaagaggcggagagagagatagctgagtaccgtgcgcagatggaggctgatttc 248
           |||||||| ||||| |||||||| ||||||||||||||||| |||||||| ||||| |||
Sbjct: 619 gcaaaagaggaggctgagagagaaatagctgagtaccgtgctcagatggaagctgagttc 560

                
Query: 249 cagag 253
           |||||
Sbjct: 559 cagag 555



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 114/139 (82%)
 Strand = Plus / Minus

                                                                       
Query: 270 agcggtgactctggtgcaaatgtcaaacgccttgagcaagagacaaacgtaaaaattgaa 329
           |||||||| ||||||||||| || ||||| ||||||||||| ||  ||   |||||||  
Sbjct: 463 agcggtgattctggtgcaaacgtaaaacggcttgagcaagaaactgacacgaaaattgcg 404

                                                                       
Query: 330 cagctcaagcagcaggcagcaaacatctccccagaggtgattcagatgcttctgaggcac 389
           || || ||| ||||||| |||||  ||||||| || ||||| ||||||||||| ||||| 
Sbjct: 403 caactgaaggagcaggctgcaaatgtctcccctgaagtgatccagatgcttcttaggcat 344

                              
Query: 390 gtcaccactgtgaagaact 408
           || ||||| ||||||||||
Sbjct: 343 gtaaccaccgtgaagaact 325



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                      
Query: 100  gtggaatccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgc 157
            ||||||| ||||||||  | |||||||||||||| ||||| || ||||| ||||||||
Sbjct: 1383 gtggaattcagcaattattggctgcagagcaagaagctcaacagattgttaatgctgc 1326
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>emb|AJ005900.1|NTA005900 Nicotiana tabacum mRNA for V-ATPase subunit G (vag2 gene)
          Length = 552

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                         
Query: 265 agaccagcggtgactctggtgcaaatgtcaaacgccttgagcaaga 310
           |||| |||||||| || ||||| |||||||||||||||||||||||
Sbjct: 266 agactagcggtgattcgggtgctaatgtcaaacgccttgagcaaga 311



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 122 tgcagagcaagatgctcagcaaattgtaaatgctgccagg 161
           |||||||||||| ||||| || || || ||||||||||||
Sbjct: 123 tgcagagcaagaagctcaacatatagtcaatgctgccagg 162
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>gb|DQ284486.1| Solanum tuberosum clone 020G11 ATPase-like mRNA, complete cds
          Length = 716

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                
Query: 375 atgcttctgaggcacgtcaccactgtgaagaactaaa 411
           ||||||||||||||||| ||||| |||||||||||||
Sbjct: 341 atgcttctgaggcacgtaaccacagtgaagaactaaa 377



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 79/96 (82%)
 Strand = Plus / Plus

                                                                       
Query: 210 gagatagctgagtaccgtgcgcagatggaggctgatttccagagaaagctcaccgagacc 269
           ||||||||||| | ||||||  | ||||||||||| || |||||||||||     |||| 
Sbjct: 176 gagatagctgaattccgtgcttacatggaggctgaatttcagagaaagcttgaacagact 235

                                               
Query: 270 agcggtgactctggtgcaaatgtcaaacgccttgag 305
           || |||||||| ||||| ||||||||||| ||||||
Sbjct: 236 agtggtgactcaggtgctaatgtcaaacgtcttgag 271
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>emb|AJ005899.1|NTA005899 Nicotiana tabacum mRNA for V-ATPase subunit G (vag1 gene)
          Length = 807

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 372 cagatgcttctgaggcacgtcaccactgtgaagaactaa 410
           |||||||| ||||||||||| ||||| ||||||||||||
Sbjct: 346 cagatgctcctgaggcacgtaaccacagtgaagaactaa 384



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 82/101 (81%)
 Strand = Plus / Plus

                                                                       
Query: 210 gagatagctgagtaccgtgcgcagatggaggctgatttccagagaaagctcaccgagacc 269
           ||||||||||| |  |||||  | ||||||||||| || |||||||||||     |||| 
Sbjct: 184 gagatagctgaatttcgtgcttacatggaggctgagtttcagagaaagcttgaacagact 243

                                                    
Query: 270 agcggtgactctggtgcaaatgtcaaacgccttgagcaaga 310
           || |||||||| || || ||||||||||| |||||||||||
Sbjct: 244 agtggtgactcgggcgctaatgtcaaacgtcttgagcaaga 284
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>dbj|AK068212.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146D16, full
            insert sequence
          Length = 1366

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                      
Query: 100  gtggaatccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgc 157
            ||||||| ||||||||  | |||||||||||||| ||||| || ||||| ||||||||
Sbjct: 1069 gtggaattcagcaattattggctgcagagcaagaagctcaacagattgttaatgctgc 1126
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>emb|AJ879064.1| Capsicum chinense mRNA for ATPase
          Length = 617

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 79/97 (81%)
 Strand = Plus / Plus

                                                                       
Query: 210 gagatagctgagtaccgtgcgcagatggaggctgatttccagagaaagctcaccgagacc 269
           ||||||||||| | ||||||  | |||||||| || || |||||||||||     |||| 
Sbjct: 198 gagatagctgaattccgtgcttacatggaggccgagtttcagagaaagcttgaacagact 257

                                                
Query: 270 agcggtgactctggtgcaaatgtcaaacgccttgagc 306
           || |||||||| ||||| ||||||||||| |||||||
Sbjct: 258 agtggtgactcaggtgctaatgtcaaacggcttgagc 294



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 373 agatgcttctgaggcacgtcaccactgtgaagaactaa 410
           |||||||||||||||| || || || ||||||||||||
Sbjct: 361 agatgcttctgaggcatgtaacgacagtgaagaactaa 398
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>gb|AY149472.1| Acinetobacter baumannii strain 8399 siderophore and iron transport
            locus, complete sequence
          Length = 21931

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 320  aaaaattgaacagctcaagcagca 343
            ||||||||||||||||||||||||
Sbjct: 3128 aaaaattgaacagctcaagcagca 3151
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>gb|AC128638.34| Medicago truncatula clone mth2-36h10, complete sequence
          Length = 110895

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 279 tctggtgcaaatgtcaaacgccttgagcaagagac 313
           |||||||| |||||||| || ||||||||||||||
Sbjct: 39  tctggtgctaatgtcaagcgacttgagcaagagac 73
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>gb|AC148995.2| Medicago truncatula chromosome 7 BAC clone mth2-49l23, complete sequence
          Length = 128239

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                 
Query: 279    tctggtgcaaatgtcaaacgccttgagcaagagac 313
              |||||||| |||||||| || ||||||||||||||
Sbjct: 102402 tctggtgctaatgtcaagcgacttgagcaagagac 102436
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>ref|NM_118502.2| Arabidopsis thaliana unknown protein AT4G23710 mRNA, complete cds
          Length = 697

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 105 atccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgc 154
           ||||||||| |||||||||| || |  || |||||||||||||| |||||
Sbjct: 122 atccagcaactgcttgctgctgaacgtgaagctcagcaaattgtcaatgc 171
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>ref|NM_180158.2| Arabidopsis thaliana VMA10 (VACUOLAR MEMBRANE ATPASE 10) AT3G01390
           (VMA10) transcript variant AT3G01390.2 mRNA, complete
           cds
          Length = 834

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 88/110 (80%)
 Strand = Plus / Plus

                                                                       
Query: 105 atccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgccagggct 164
           ||||| || ||||||||||| |||  ||| ||||| || ||||| |||||||| ||| | 
Sbjct: 268 atccaacagttgcttgctgctgaggtagaagctcaacacattgtcaatgctgcaaggacc 327

                                                             
Query: 165 gctaaaacggcaaggcttaggaaagcaaaagaagaggcggagagagagat 214
           || |||| |||||| || | | |||| || |||||||| |||| ||||||
Sbjct: 328 gcaaaaatggcaagactgaagcaagctaaggaagaggcagagaaagagat 377
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>ref|NM_111005.3| Arabidopsis thaliana VMA10 (VACUOLAR MEMBRANE ATPASE 10) AT3G01390
           (VMA10) transcript variant AT3G01390.1 mRNA, complete
           cds
          Length = 665

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 88/110 (80%)
 Strand = Plus / Plus

                                                                       
Query: 105 atccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgccagggct 164
           ||||| || ||||||||||| |||  ||| ||||| || ||||| |||||||| ||| | 
Sbjct: 99  atccaacagttgcttgctgctgaggtagaagctcaacacattgtcaatgctgcaaggacc 158

                                                             
Query: 165 gctaaaacggcaaggcttaggaaagcaaaagaagaggcggagagagagat 214
           || |||| |||||| || | | |||| || |||||||| |||| ||||||
Sbjct: 159 gcaaaaatggcaagactgaagcaagctaaggaagaggcagagaaagagat 208
to top
>emb|AL627308.20| Human DNA sequence from clone RP11-211A18 on chromosome 1 Contains
            the 5' end of the CDC42BPA gene for CDC42 binding protein
            kinase alpha (DMPK-like), a cathepsin B (CTSB)
            pseudogene, a novel pseudogene and a CpG island, complete
            sequence
          Length = 124156

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 494  ttttgccacttccagctgtaat 515
            ||||||||||||||||||||||
Sbjct: 3878 ttttgccacttccagctgtaat 3899
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>emb|AL161560.2|ATCHRIV60 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 60
          Length = 196677

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                               
Query: 105   atccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgc 154
             ||||||||| |||||||||| || |  || |||||||||||||| |||||
Sbjct: 9976  atccagcaactgcttgctgctgaacgtgaagctcagcaaattgtcaatgc 10025
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>emb|AL035394.1|ATF9D16 Arabidopsis thaliana DNA chromosome 4, BAC clone  F9D16 (ESSAII
             project)
          Length = 119430

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                               
Query: 105   atccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgc 154
             ||||||||| |||||||||| || |  || |||||||||||||| |||||
Sbjct: 68385 atccagcaactgcttgctgctgaacgtgaagctcagcaaattgtcaatgc 68434
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>gb|AY114730.1| Arabidopsis thaliana vacuolar membrane ATPase subunit G AVMA10
           (At3g01390) mRNA, complete cds
          Length = 536

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 88/110 (80%)
 Strand = Plus / Plus

                                                                       
Query: 105 atccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgccagggct 164
           ||||| || ||||||||||| |||  ||| ||||| || ||||| |||||||| ||| | 
Sbjct: 28  atccaacagttgcttgctgctgaggtagaagctcaacacattgtcaatgctgcaaggacc 87

                                                             
Query: 165 gctaaaacggcaaggcttaggaaagcaaaagaagaggcggagagagagat 214
           || |||| |||||| || | | |||| || |||||||| |||| ||||||
Sbjct: 88  gcaaaaatggcaagactgaagcaagctaaggaagaggcagagaaagagat 137
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>gb|AY072365.1| Arabidopsis thaliana vacuolar membrane ATPase subunit G (AVMA10)
           (At3g01390) mRNA, complete cds
          Length = 654

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 88/110 (80%)
 Strand = Plus / Plus

                                                                       
Query: 105 atccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgccagggct 164
           ||||| || ||||||||||| |||  ||| ||||| || ||||| |||||||| ||| | 
Sbjct: 99  atccaacagttgcttgctgctgaggtagaagctcaacacattgtcaatgctgcaaggacc 158

                                                             
Query: 165 gctaaaacggcaaggcttaggaaagcaaaagaagaggcggagagagagat 214
           || |||| |||||| || | | |||| || |||||||| |||| ||||||
Sbjct: 159 gcaaaaatggcaagactgaagcaagctaaggaagaggcagagaaagagat 208
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>emb|BX825355.1|CNS0A6BQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL31ZE11 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 613

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 88/110 (80%)
 Strand = Plus / Plus

                                                                       
Query: 105 atccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgccagggct 164
           ||||| || ||||||||||| |||  ||| ||||| || ||||| |||||||| ||| | 
Sbjct: 48  atccaacagttgcttgctgctgaggtagaagctcaacacattgtcaatgctgcaaggacc 107

                                                             
Query: 165 gctaaaacggcaaggcttaggaaagcaaaagaagaggcggagagagagat 214
           || |||| |||||| || | | |||| || |||||||| |||| ||||||
Sbjct: 108 gcaaaaatggcaagactgaagcaagctaaggaagaggcagagaaagagat 157
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>gb|BT003107.1| Arabidopsis thaliana At4g23710 mRNA, complete cds
          Length = 321

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 105 atccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgc 154
           ||||||||| |||||||||| || |  || |||||||||||||| |||||
Sbjct: 16  atccagcaactgcttgctgctgaacgtgaagctcagcaaattgtcaatgc 65
to top
>emb|AJ005901.1|ATA005901 Arabidopsis thaliana mRNA for V-ATPase subunit G (vag1 gene)
          Length = 528

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 88/110 (80%)
 Strand = Plus / Plus

                                                                       
Query: 105 atccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgccagggct 164
           ||||| || ||||||||||| |||  ||| ||||| || ||||| |||||||| ||| | 
Sbjct: 66  atccaacagttgcttgctgctgaggtagaagctcaacacattgtcaatgctgcaaggacc 125

                                                             
Query: 165 gctaaaacggcaaggcttaggaaagcaaaagaagaggcggagagagagat 214
           || |||| |||||| || | | |||| || |||||||| |||| ||||||
Sbjct: 126 gcaaaaatggcaagactgaagcaagctaaggaagaggcagagaaagagat 175
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>gb|AF184068.1|AF184068 Citrus limon vacuolar membrane ATPase subunit G (LVMA10) mRNA,
           complete cds
          Length = 500

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 121/154 (78%)
 Strand = Plus / Plus

                                                                       
Query: 100 gtggaatccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgcca 159
           ||||||| ||||||||||| ||||| || ||||| ||||| || |||||   ||||||||
Sbjct: 113 gtggaattcagcaattgctggctgctgaacaagaagctcaacacattgttgctgctgcca 172

                                                                       
Query: 160 gggctgctaaaacggcaaggcttaggaaagcaaaagaagaggcggagagagagatagctg 219
           |   ||| |||| ||| || || | | |||| ||||||||||| || || ||||| ||||
Sbjct: 173 gaaatgcaaaaatggctagactgaagcaagccaaagaagaggctgaaagggagattgctg 232

                                             
Query: 220 agtaccgtgcgcagatggaggctgatttccagag 253
           | || || || ||| |||||  ||| ||||||||
Sbjct: 233 aatatcgagctcaggtggagcgtgagttccagag 266
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>gb|AF181688.1|AF181688 Arabidopsis thaliana vacuolar membrane ATPase subunit G (AVMA10)
           mRNA, complete cds
          Length = 652

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 88/110 (80%)
 Strand = Plus / Plus

                                                                       
Query: 105 atccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgccagggct 164
           ||||| || ||||||||||| |||  ||| ||||| || ||||| |||||||| ||| | 
Sbjct: 70  atccaacagttgcttgctgctgaggtagaagctcaacacattgtcaatgctgcaaggacc 129

                                                             
Query: 165 gctaaaacggcaaggcttaggaaagcaaaagaagaggcggagagagagat 214
           || |||| |||||| || | | |||| || |||||||| |||| ||||||
Sbjct: 130 gcaaaaatggcaagactgaagcaagctaaggaagaggcagagaaagagat 179
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>emb|CR715651.2|CNS0GF5B Tetraodon nigroviridis full-length cDNA
          Length = 1034

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 236 ggaggctgatttccagagaaa 256
           |||||||||||||||||||||
Sbjct: 852 ggaggctgatttccagagaaa 872
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>gb|AC099558.2| Homo sapiens chromosome 3 clone RP11-680P23, complete sequence
          Length = 180049

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 147   gtaaatgctgccagggctgct 167
             |||||||||||||||||||||
Sbjct: 56512 gtaaatgctgccagggctgct 56532
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>gb|AC092636.3| Homo sapiens BAC clone RP11-353K11 from 2, complete sequence
          Length = 199721

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 235    tggaggctgatttccagagaa 255
              |||||||||||||||||||||
Sbjct: 149858 tggaggctgatttccagagaa 149878
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>gb|AC114480.2| Homo sapiens chromosome 3 clone RP11-755B10, complete sequence
          Length = 196773

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 147    gtaaatgctgccagggctgct 167
              |||||||||||||||||||||
Sbjct: 134646 gtaaatgctgccagggctgct 134666
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>gb|AC140658.2| Homo sapiens chromosome 16 clone RP11-812E19, complete sequence
          Length = 188406

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 230    gcagatggaggctgatttcc 249
              ||||||||||||||||||||
Sbjct: 170354 gcagatggaggctgatttcc 170335
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>gb|AC125225.4| Mus musculus BAC clone RP23-36I17 from 6, complete sequence
          Length = 215406

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 142  aaattgtaaatgctgccagg 161
            ||||||||||||||||||||
Sbjct: 1962 aaattgtaaatgctgccagg 1943
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>gb|AC121867.2| Mus musculus BAC clone RP24-115M7 from 6, complete sequence
          Length = 165179

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 142   aaattgtaaatgctgccagg 161
             ||||||||||||||||||||
Sbjct: 21739 aaattgtaaatgctgccagg 21758
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>gb|AC119831.6| Mus musculus chromosome 9, clone RP23-281F13, complete sequence
          Length = 195918

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 352    acatctccccagaggtgattcaga 375
              |||||||||||||||||| |||||
Sbjct: 170750 acatctccccagaggtgactcaga 170727
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>gb|AC152348.7| Medicago truncatula clone mth2-52e17, complete sequence
          Length = 122070

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 619 taaaccctttttgtctctcc 638
           ||||||||||||||||||||
Sbjct: 60  taaaccctttttgtctctcc 79
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>gb|AC166997.1| Mus musculus BAC clone RP23-107H9 from chromosome 14, complete sequence
          Length = 201316

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 329   acagctcaagcagcaggcag 348
             ||||||||||||||||||||
Sbjct: 30267 acagctcaagcagcaggcag 30248
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>emb|AL391825.15| Human DNA sequence from clone RP11-456P18 on chromosome 1 Contains the
             3' end of the ATF6 gene for activating transcription
             factor 6, a  proteasome (prosome, macropain) activator
             subunit 1 (PA28 alpha)(PSME1) pseudogene, the 3' end of a
             novel gene (DKFZP586L151) and a CpG island, complete
             sequence
          Length = 211662

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 233   gatggaggctgatttccagagaaa 256
             |||||||||||||| |||||||||
Sbjct: 30731 gatggaggctgattgccagagaaa 30708
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>gb|AC141587.2| Homo sapiens chromosome 16 clone RP11-1046E19, complete sequence
          Length = 186890

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 230    gcagatggaggctgatttcc 249
              ||||||||||||||||||||
Sbjct: 140680 gcagatggaggctgatttcc 140699
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>gb|AC140254.4| Mus musculus BAC clone RP23-467N7 from chromosome 10, complete sequence
          Length = 196465

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 197    agaggcggagagagagatag 216
              ||||||||||||||||||||
Sbjct: 154900 agaggcggagagagagatag 154881
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>gb|AC147018.4| Mus musculus BAC clone RP23-284H11 from chromosome 10, complete sequence
          Length = 182735

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 197    agaggcggagagagagatag 216
              ||||||||||||||||||||
Sbjct: 160522 agaggcggagagagagatag 160541
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>emb|BX248584.1| Blochmannia floridanus complete genome; segment 1/3
          Length = 250050

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 601   tcgtaaattttgtcgattta 620
             ||||||||||||||||||||
Sbjct: 92868 tcgtaaattttgtcgattta 92887
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>gb|AC008802.7| Homo sapiens chromosome 5 clone CTD-2073O6, complete sequence
          Length = 92418

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 508   gctgtaattccttgttcttt 527
             ||||||||||||||||||||
Sbjct: 17864 gctgtaattccttgttcttt 17845
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>emb|BX901917.9| Zebrafish DNA sequence from clone DKEY-32E10 in linkage group 5, complete
              sequence
          Length = 238589

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 408    taaaggttgatgagtcggcc 427
              ||||||||||||||||||||
Sbjct: 232829 taaaggttgatgagtcggcc 232848
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>gb|AC160836.12| Medicago truncatula clone mth2-115l23, complete sequence
          Length = 116158

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 619   taaaccctttttgtctctcc 638
             ||||||||||||||||||||
Sbjct: 48993 taaaccctttttgtctctcc 48974
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>gb|AC106727.5| Homo sapiens 3q BAC RP11-534K3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 153692

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 204   gagagagagatagctgagta 223
             ||||||||||||||||||||
Sbjct: 20110 gagagagagatagctgagta 20091
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>gb|AC023538.7| Homo sapiens chromosome 8, clone RP11-510I21, complete sequence
          Length = 189543

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 204    gagagagagatagctgagta 223
              ||||||||||||||||||||
Sbjct: 133588 gagagagagatagctgagta 133607
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>gb|AC007028.3| Homo sapiens chromosome 16 clone RP5-835P2, complete sequence
          Length = 148807

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 230   gcagatggaggctgatttcc 249
             ||||||||||||||||||||
Sbjct: 68419 gcagatggaggctgatttcc 68400
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>gb|AC160052.2| Mus musculus BAC clone RP24-173L14 from chromosome 9, complete sequence
          Length = 154436

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 352    acatctccccagaggtgattcaga 375
              |||||||||||||||||| |||||
Sbjct: 122971 acatctccccagaggtgactcaga 122994
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>gb|AC141272.3| Homo sapiens chromosome 16 clone RP11-1415K9, complete sequence
          Length = 185187

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 230   gcagatggaggctgatttcc 249
             ||||||||||||||||||||
Sbjct: 54778 gcagatggaggctgatttcc 54797
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>gb|AC141248.2| Homo sapiens chromosome 16 clone RP11-1251B5, complete sequence
          Length = 173206

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 230   gcagatggaggctgatttcc 249
             ||||||||||||||||||||
Sbjct: 80391 gcagatggaggctgatttcc 80410
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>gb|AC092915.7| Homo sapiens 3 BAC RP11-585F20 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 187215

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 183    aggaaagcaaaagaagaggc 202
              ||||||||||||||||||||
Sbjct: 156263 aggaaagcaaaagaagaggc 156282
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>gb|AC136428.3| Homo sapiens chromosome 16 clone RP11-104C4, complete sequence
          Length = 193708

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 230    gcagatggaggctgatttcc 249
              ||||||||||||||||||||
Sbjct: 151083 gcagatggaggctgatttcc 151102
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 225   cgtgcgcagatggaggctgatttc 248
             ||||||||||| ||||||||||||
Sbjct: 20700 cgtgcgcagatcgaggctgatttc 20723
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>emb|AJ438591.1|MCR438591 Mesembryanthemum crystallinum mRNA for vacuolar ATPase subunit G
           (vha-G gene)
          Length = 587

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 131/168 (77%)
 Strand = Plus / Plus

                                                                       
Query: 164 tgctaaaacggcaaggcttaggaaagcaaaagaagaggcggagagagagatagctgagta 223
           |||||| ||||| || || ||| |||||||||||||||| || |  ||||| ||||| | 
Sbjct: 130 tgctaagacggccagactaaggcaagcaaaagaagaggctgaaaaggagattgctgaatt 189

                                                                       
Query: 224 ccgtgcgcagatggaggctgatttccagagaaagctcaccgagaccagcggtgactctgg 283
           |||||| || ||||| || |||   ||||||| |||  | ||||  | ||| ||||| ||
Sbjct: 190 ccgtgcccaaatggaagccgatcatcagagaaggcttgcagagagtaccggagactcagg 249

                                                           
Query: 284 tgcaaatgtcaaacgccttgagcaagagacaaacgtaaaaattgaaca 331
           ||| ||||| || |||||||| ||||| || || |  |||||||||||
Sbjct: 250 tgctaatgtgaagcgccttgaacaagaaaccaatgctaaaattgaaca 297
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>ref|NG_001019.4| Homo sapiens immunoglobulin heavy locus (IGH@) on chromosome 14
          Length = 1279711

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 230    gcagatggaggctgatttcc 249
              ||||||||||||||||||||
Sbjct: 423254 gcagatggaggctgatttcc 423273



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 230    gcagatggaggctgatttcc 249
              ||||||||||||||||||||
Sbjct: 240991 gcagatggaggctgatttcc 241010
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>gb|AC005337.1|AC005337 Homo sapiens chromosome 19, cosmid R25269, complete sequence
          Length = 43581

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 177   aggcttaggaaagcaaaaga 196
             ||||||||||||||||||||
Sbjct: 14524 aggcttaggaaagcaaaaga 14505
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>gb|CP000165.1| Drosophila melanogaster genomic scaffold 211000022278591
          Length = 119078

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 176  aaggcttaggaaagcaaaag 195
            ||||||||||||||||||||
Sbjct: 6302 aaggcttaggaaagcaaaag 6321
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>gb|AC135018.3| Mus musculus BAC clone RP23-124G8 from 6, complete sequence
          Length = 192911

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 142    aaattgtaaatgctgccagg 161
              ||||||||||||||||||||
Sbjct: 189609 aaattgtaaatgctgccagg 189590
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>emb|AL355432.7|HS56F10 Homo sapiens chromosome 9 BAC RP11-56F10, complete sequence
          Length = 188491

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 456   atctgtttatttctttggga 475
             ||||||||||||||||||||
Sbjct: 52392 atctgtttatttctttggga 52373
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>emb|AL355433.6|HS179D22 Homo sapiens chromosome 9 BAC RP11-179D22, complete sequence
          Length = 177219

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 456    atctgtttatttctttggga 475
              ||||||||||||||||||||
Sbjct: 138176 atctgtttatttctttggga 138157
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>gb|M99679.1|HUMIGH353X Human immunoglobulin heavy chain variable region V3-53 (IGHV@)
           gene, exons 1-2
          Length = 724

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 230 gcagatggaggctgatttcc 249
           ||||||||||||||||||||
Sbjct: 608 gcagatggaggctgatttcc 627
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>dbj|AB019439.1| Homo sapiens DNA for immunoglobulin heavy-chain variable region,
             complete sequence, 3 of 5
          Length = 200000

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 230   gcagatggaggctgatttcc 249
             ||||||||||||||||||||
Sbjct: 23254 gcagatggaggctgatttcc 23273
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>dbj|AB019438.1| Homo sapiens DNA for immunoglobulin heavy-chain variable region,
             complete sequence, 2 of 5
          Length = 200000

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 230   gcagatggaggctgatttcc 249
             ||||||||||||||||||||
Sbjct: 40991 gcagatggaggctgatttcc 41010


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,759,964
Number of Sequences: 3902068
Number of extensions: 6759964
Number of successful extensions: 126942
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 126664
Number of HSP's gapped (non-prelim): 268
length of query: 640
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 617
effective length of database: 17,143,297,704
effective search space: 10577414683368
effective search space used: 10577414683368
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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