ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd25o11 |
|---|---|
| Clone Library Name | barley_pub |
>QUA1_ARATH (Q9LSG3) Glycosyltransferase QUASIMODO1 (EC 2.4.1.-)| Length = 559 Score = 53.5 bits (127), Expect = 2e-07 Identities = 25/69 (36%), Positives = 43/69 (62%) Frame = +2 Query: 215 KNANEKVKALEQTLVKGKQTQDDCSVAVKKLRAMLHSAEEQLHAQKKQTVFLTQLAAKTL 394 K E++K Q + + K++ D+ + ++KL+ + + EQL KKQ F + +AAK++ Sbjct: 152 KEVKERIKMTRQVIAEAKESFDN-QLKIQKLKDTIFAVNEQLTNAKKQGAFSSLIAAKSI 210 Query: 395 PKGLHCLPL 421 PKGLHCL + Sbjct: 211 PKGLHCLAM 219
>GLTR_ARATH (Q9FWA4) Probable glycosyltransferase At3g02350 (EC 2.4.1.-)| Length = 561 Score = 47.8 bits (112), Expect = 1e-05 Identities = 23/71 (32%), Positives = 41/71 (57%) Frame = +2 Query: 209 LPKNANEKVKALEQTLVKGKQTQDDCSVAVKKLRAMLHSAEEQLHAQKKQTVFLTQLAAK 388 L K +KVK +V+ K++ D + ++KL+ + + +EQL KK + ++AK Sbjct: 153 LEKEVKDKVKTARMMIVESKESYDT-QLKIQKLKDTIFAVQEQLTKAKKNGAVASLISAK 211 Query: 389 TLPKGLHCLPL 421 ++PK LHCL + Sbjct: 212 SVPKSLHCLAM 222
>ANT1_ONCVO (P21249) Major antigen (Myosin-like antigen)| Length = 2022 Score = 35.4 bits (80), Expect = 0.055 Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 11/134 (8%) Frame = +2 Query: 11 KENTDGRSRN---MPLSDTRVRDIRDQLIKAKVYLGLGAIRANPQYLRDLRQRIREVQKV 181 + N D ++N + L+ ++++ RD++IK K L + L DL ++ K+ Sbjct: 627 RTNYDSANKNTVAIELTVKQIKEQRDEIIKQKDKLA--------KELADLENKLNNETKM 678 Query: 182 LGDASKDS--------DLPKNANEKVKALEQTLVKGKQTQDDCSVAVKKLRAMLHSAEEQ 337 GDA K + + K NE + E T+++ + DD +K +A L S + Sbjct: 679 RGDAEKLNQRHLDEIDNFKKQINEYIT--EVTIIR--RQNDDFDTQMKTNQAKLSSMKNS 734 Query: 338 LHAQKKQTVFLTQL 379 L A KK+ L+++ Sbjct: 735 LIAAKKEIEKLSEM 748
>MIX1_CAEEL (Q09591) Mitotic chromosome and X-chromosome-associated protein mix-1| (Structural maintenance of chromosome 2) (Lethal protein 29) Length = 1244 Score = 34.3 bits (77), Expect = 0.12 Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 13/139 (9%) Frame = +2 Query: 23 DGRSRNMPLSDT---RVRDIRDQLIKAKVYLGLGAIRANPQ----YLRDLRQRIREVQKV 181 D +R + L++ + RD+ +QL A L N +RDL+ E +K Sbjct: 711 DALNRELQLTEASSQKCRDLNNQLATAMRKLAQVKTNINNSEFGIVVRDLKVHSEEYEKN 770 Query: 182 LGDASKDSDLPKNANEKVKALEQTLVKGKQTQDDCSVAVKKLRAMLHSAEEQLHAQK--- 352 + K+ +K+K LE K K +Q+ K+L A+L AE+ + K Sbjct: 771 QAEIEATVKTLKDVEDKIKTLESMKNKDKNSQEK---RKKELTALLQKAEQTVAQNKNRG 827 Query: 353 ---KQTVFLTQLAAKTLPK 400 ++ V L Q + + K Sbjct: 828 EKARREVMLLQATVEEMEK 846
>PHX2A_HUMAN (O14813) Paired mesoderm homeobox protein 2A (Paired-like homeobox| 2A) (Aristaless homeobox protein homolog) (ARIX1 homeodomain protein) Length = 284 Score = 33.9 bits (76), Expect = 0.16 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 Query: 304 APGYASLSRGAAACTKEANCFSNTTCSQNPSQRSSLPP 417 A G A +G A C+ E + +TCS P +SLPP Sbjct: 157 AAGAAGAKKGEARCSSEDDDSKESTCSPTPDSTASLPP 194
>MYSN_DROME (Q99323) Myosin heavy chain, non-muscle (Zipper protein) (Myosin II)| (Non-muscle MHC) Length = 2057 Score = 32.7 bits (73), Expect = 0.36 Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 7/89 (7%) Frame = +2 Query: 125 ANPQYLRDLRQRIREVQKVLGDASKDSDLPKNA-------NEKVKALEQTLVKGKQTQDD 283 A Y R L + ++Q++ A +D+DL K N+ ++ALE+ + + D Sbjct: 1442 AKRNYERKLAEVTTQMQEIKKKAEEDADLAKELEEGKKRLNKDIEALERQVKELIAQNDR 1501 Query: 284 CSVAVKKLRAMLHSAEEQLHAQKKQTVFL 370 + KK+++ L A +L AQ+ + + L Sbjct: 1502 LDKSKKKIQSELEDATIELEAQRTKVLEL 1530
>PHX2A_RAT (Q62782) Paired mesoderm homeobox protein 2A (Paired-like homeobox| 2A) (Aristaless homeobox protein homolog) (ARIX1 homeodomain protein) Length = 281 Score = 32.7 bits (73), Expect = 0.36 Identities = 14/38 (36%), Positives = 19/38 (50%) Frame = +1 Query: 304 APGYASLSRGAAACTKEANCFSNTTCSQNPSQRSSLPP 417 A G +G A C+ E + +TCS P +SLPP Sbjct: 157 AAGATGAKKGEARCSSEDDDSKESTCSHTPDSTASLPP 194
>PHX2A_MOUSE (Q62066) Paired mesoderm homeobox protein 2A (Paired-like homeobox| 2A) (PHOX2A homeodomain protein) (Aristaless homeobox protein homolog) Length = 280 Score = 32.3 bits (72), Expect = 0.46 Identities = 14/38 (36%), Positives = 19/38 (50%) Frame = +1 Query: 304 APGYASLSRGAAACTKEANCFSNTTCSQNPSQRSSLPP 417 A G +G A C+ E + +TCS P +SLPP Sbjct: 157 AAGATGAKKGEARCSSEDDDSKESTCSPTPDSTASLPP 194
>ISPG_CORGL (Q8NP12) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC| 1.17.4.3) (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase) Length = 378 Score = 31.2 bits (69), Expect = 1.0 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = +2 Query: 86 IKAKVYLGLGAIRANPQYLRDLRQRIREVQKVLGDA 193 I A + G A+R NP +++ R++EV K GDA Sbjct: 90 IFAAIDAGCAAVRVNPGNIKEFDGRVKEVAKAAGDA 125
>CING_XENLA (Q9PTD7) Cingulin| Length = 1360 Score = 31.2 bits (69), Expect = 1.0 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = +2 Query: 224 NEKVKALEQTLVKGKQTQDDCSVAVKKLRAMLHSAEEQLHAQKKQTVFLT 373 ++++++LEQ + K+ QDD S VK L L E +L +K LT Sbjct: 1102 SQRLQSLEQDIESKKRVQDDRSRQVKVLEDKLKRMEAELDEEKNTVELLT 1151
>RL29_PYRKO (Q5JDH6) 50S ribosomal protein L29P| Length = 66 Score = 31.2 bits (69), Expect = 1.0 Identities = 14/37 (37%), Positives = 24/37 (64%) Frame = +2 Query: 53 DTRVRDIRDQLIKAKVYLGLGAIRANPQYLRDLRQRI 163 D ++R++R +L K + L +GA NP +R+LR+ I Sbjct: 15 DKKIRELRLELAKERGVLTMGASMENPMVIRNLRRDI 51
>DUT_CLODI (O30931) Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC| 3.6.1.23) (dUTPase) (dUTP pyrophosphatase) Length = 143 Score = 30.8 bits (68), Expect = 1.4 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Frame = +3 Query: 6 PQKKTQMVGVEICLCLXXXXXXXXXXXXRQRSTLVLEPFEQILNTSGICDSGY-GKFKRC 182 P +T+++ IC+ L R RS L L+ +LNT G D GY G+ K Sbjct: 37 PPGETKLIKTGICIELPTMTEAQV----RPRSGLALKHSVTVLNTPGTIDEGYRGELKII 92 Query: 183 LVMH 194 L+ H Sbjct: 93 LINH 96
>ISPG_CORDI (Q6NGL3) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC| 1.17.4.3) (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase) Length = 391 Score = 30.8 bits (68), Expect = 1.4 Identities = 18/58 (31%), Positives = 28/58 (48%) Frame = +2 Query: 107 GLGAIRANPQYLRDLRQRIREVQKVLGDASKDSDLPKNANEKVKALEQTLVKGKQTQD 280 G A+R NP +++ R++EV K GDA + NA K + + GK T + Sbjct: 116 GCAAVRVNPGNIKEFDGRVKEVAKAAGDAGIPIRIGVNAGSLDKRIMEKY--GKATPE 171
>DUT_NOCFA (Q5YT90) Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC| 3.6.1.23) (dUTPase) (dUTP pyrophosphatase) Length = 165 Score = 30.8 bits (68), Expect = 1.4 Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 2/43 (4%) Frame = +3 Query: 96 RSTLVLEPFEQILNTSGICDSGY-GKFKRCLVMH-PRTLIYQR 218 RS L + ++NT G D+GY G+ K CL+ H PRT I R Sbjct: 66 RSGLAAKTGLSVVNTPGTVDAGYRGEIKVCLINHDPRTPIELR 108
>RUVB_BACSU (O32055) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 334 Score = 30.0 bits (66), Expect = 2.3 Identities = 13/39 (33%), Positives = 24/39 (61%) Frame = +2 Query: 122 RANPQYLRDLRQRIREVQKVLGDASKDSDLPKNANEKVK 238 R P+ L +R+R+ +VLGD+ D+ +NA E+++ Sbjct: 215 RGTPRVANRLLRRVRDFAQVLGDSRITEDISQNALERLQ 253
>CING_MOUSE (P59242) Cingulin| Length = 1191 Score = 30.0 bits (66), Expect = 2.3 Identities = 22/78 (28%), Positives = 36/78 (46%) Frame = +2 Query: 140 LRDLRQRIREVQKVLGDASKDSDLPKNANEKVKALEQTLVKGKQTQDDCSVAVKKLRAML 319 L+ LRQ ++ Q A D +L ++++ LEQ K+ QDD + +K L + Sbjct: 903 LQRLRQALQTSQAERDTARLDKEL---LAQRLQGLEQEAENKKRFQDDKARQLKSLEEKV 959 Query: 320 HSAEEQLHAQKKQTVFLT 373 E +L +K LT Sbjct: 960 SRLEAELDEEKNTVELLT 977
>SRP54_THEAQ (O07347) Signal recognition particle protein (Fifty-four homolog)| Length = 429 Score = 30.0 bits (66), Expect = 2.3 Identities = 23/96 (23%), Positives = 49/96 (51%), Gaps = 1/96 (1%) Frame = +2 Query: 80 QLIKAKVYLGLGAIRANPQYLR-DLRQRIREVQKVLGDASKDSDLPKNANEKVKALEQTL 256 Q + A++ +G +R + DL+ +RE+++ L DA + ++ ++ E+V+ E+ L Sbjct: 2 QQLSARLQEAIGRLRGRGRITEEDLKATLREIRRALMDADVNLEVARDFVERVR--EEAL 59 Query: 257 VKGKQTQDDCSVAVKKLRAMLHSAEEQLHAQKKQTV 364 GKQ + + A L + + +E L + + V Sbjct: 60 --GKQVLESLTPAEVILATVYEALKEALGGEARLPV 93
>CG024_MOUSE (Q9D7X8) Protein C7orf24 homolog| Length = 188 Score = 30.0 bits (66), Expect = 2.3 Identities = 16/46 (34%), Positives = 27/46 (58%) Frame = +2 Query: 167 EVQKVLGDASKDSDLPKNANEKVKALEQTLVKGKQTQDDCSVAVKK 304 + +KV+ +K++ LP+ EK+KA+E KGK D+ +KK Sbjct: 138 QYKKVICMGAKENGLPQEYQEKLKAIEPNEYKGK-ISDEMEDIIKK 182
>ALB32_ARATH (Q8L718) Inner membrane ALBINO3-like protein 2, chloroplast| precursor (Ath5) Length = 525 Score = 29.6 bits (65), Expect = 3.0 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 4/33 (12%) Frame = +3 Query: 333 SSCMHKRSKLFF*HNLQPKPF----PKVFTASP 419 SS H+ S LFF H+L+P F P +F+ SP Sbjct: 11 SSSRHRLSSLFFSHHLKPSSFISHSPPLFSPSP 43
>CING_HUMAN (Q9P2M7) Cingulin| Length = 1197 Score = 29.6 bits (65), Expect = 3.0 Identities = 21/78 (26%), Positives = 37/78 (47%) Frame = +2 Query: 140 LRDLRQRIREVQKVLGDASKDSDLPKNANEKVKALEQTLVKGKQTQDDCSVAVKKLRAML 319 ++ LRQ ++ Q A D +L ++++ LEQ K++QDD + +K L + Sbjct: 909 IQRLRQALQASQAERDTARLDKEL---LAQRLQGLEQEAENKKRSQDDRARQLKGLEEKV 965 Query: 320 HSAEEQLHAQKKQTVFLT 373 E +L +K LT Sbjct: 966 SRLETELDEEKNTVELLT 983
>KRP95_STRPU (P46871) Kinesin-II 95 kDa subunit (KRP-85/95 95 kDa subunit)| Length = 742 Score = 29.3 bits (64), Expect = 3.9 Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 3/76 (3%) Frame = +2 Query: 119 IRANPQYLRDLRQRI-REVQKVLGDASKDSDLPKNANEKVKALEQ-TLVKGKQTQDDCSV 292 I AN + + +Q++ EVQK G+ K+ + K+KA+E LV GK D + Sbjct: 425 IMANQSMIAEEKQKLLSEVQKRQGEIKKEHQQKEMLEGKIKAMESKLLVGGKSIVDHTNE 484 Query: 293 AVKKLRAM-LHSAEEQ 337 +K+ L AEE+ Sbjct: 485 QQRKIEEQRLLLAEEK 500
>EFG_DEIRA (Q9RXK5) Elongation factor G (EF-G)| Length = 698 Score = 29.3 bits (64), Expect = 3.9 Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 2/106 (1%) Frame = +2 Query: 53 DTRVRDIRDQL--IKAKVYLGLGAIRANPQYLRDLRQRIREVQKVLGDASKDSDLPKNAN 226 D V DIR++L I A + +GA + +R + LG + D+P Sbjct: 154 DLVVNDIRERLGAIPAPIQYPMGAENDFKGVIDIVRMQAHTFTNDLGTEIQVGDVPAEYM 213 Query: 227 EKVKALEQTLVKGKQTQDDCSVAVKKLRAMLHSAEEQLHAQKKQTV 364 +KV + Q L++ D+ + +K L + +E + A +K T+ Sbjct: 214 DKVNEMRQQLIEAAAEVDE-DLMMKFLEGEEPTQQELIAAIRKGTI 258
>RF1_SALTY (P0A287) Peptide chain release factor 1 (RF-1)| Length = 360 Score = 29.3 bits (64), Expect = 3.9 Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 8/95 (8%) Frame = +2 Query: 140 LRDLRQRIREVQKVLGDASKDSDLPK-----NANEKVKALEQTLVKGKQTQDDCSVAVKK 304 L L +R EVQ +LGDA +D + ++ + + +Q QDD A Sbjct: 9 LEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQMM 68 Query: 305 L--RAMLHSAEEQL-HAQKKQTVFLTQLAAKTLPK 400 L M A+E+L A++K QL LPK Sbjct: 69 LDDPEMREMAQEELREAKEKSEQLEQQLQVLLLPK 103
>RF1_SALTI (P0A288) Peptide chain release factor 1 (RF-1)| Length = 360 Score = 29.3 bits (64), Expect = 3.9 Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 8/95 (8%) Frame = +2 Query: 140 LRDLRQRIREVQKVLGDASKDSDLPK-----NANEKVKALEQTLVKGKQTQDDCSVAVKK 304 L L +R EVQ +LGDA +D + ++ + + +Q QDD A Sbjct: 9 LEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQMM 68 Query: 305 L--RAMLHSAEEQL-HAQKKQTVFLTQLAAKTLPK 400 L M A+E+L A++K QL LPK Sbjct: 69 LDDPEMREMAQEELREAKEKSEQLEQQLQVLLLPK 103
>DYNA_CHICK (P35458) Dynactin-1 (150 kDa dynein-associated polypeptide) (DP-150)| (DAP-150) (p150-glued) Length = 1224 Score = 28.9 bits (63), Expect = 5.1 Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 8/91 (8%) Frame = +2 Query: 116 AIRANPQYLRDLRQRIREVQKVLGDASKDSDLPKNANEKVKAL---EQTLVKGK-----Q 271 +++ + L + R+ ++K L ASKD+D + EK++ QTL+K K + Sbjct: 951 SLKIKGEELSEANVRLSLLEKKLDSASKDAD---DRVEKIQTKLDETQTLLKKKEKEFEE 1007 Query: 272 TQDDCSVAVKKLRAMLHSAEEQLHAQKKQTV 364 T D + +L + +++L+ Q K+T+ Sbjct: 1008 TMDALQADIDQLESEKVELKQRLNNQSKRTI 1038 Score = 28.1 bits (61), Expect = 8.8 Identities = 21/96 (21%), Positives = 47/96 (48%), Gaps = 3/96 (3%) Frame = +2 Query: 86 IKAKVYLGLGA---IRANPQYLRDLRQRIREVQKVLGDASKDSDLPKNANEKVKALEQTL 256 +K +V LGA + + DL +++RE+++ +GD +++ E + E L Sbjct: 419 LKEQVDAALGAEEMVETLTERNLDLEEKVRELRETVGDLEAMNEMNDELQENARETELEL 478 Query: 257 VKGKQTQDDCSVAVKKLRAMLHSAEEQLHAQKKQTV 364 ++ D + V++ + +A+E + A +QT+ Sbjct: 479 ---REQLDLAAARVREAEKRVEAAQETV-ADYQQTI 510
>RAD50_PYRAB (Q9UZC8) DNA double-strand break repair rad50 ATPase| Length = 880 Score = 28.9 bits (63), Expect = 5.1 Identities = 16/89 (17%), Positives = 45/89 (50%) Frame = +2 Query: 68 DIRDQLIKAKVYLGLGAIRANPQYLRDLRQRIREVQKVLGDASKDSDLPKNANEKVKALE 247 D+ +++ + + L + N + + R+R+ ++++ + + + K + E++KA Sbjct: 638 DVENEIEEKEAKLKDLESKFNEEEYEEKRERLVKLEREVSSLTARLEELKKSVEQIKATL 697 Query: 248 QTLVKGKQTQDDCSVAVKKLRAMLHSAEE 334 + L + K+ ++ + +KKL L E+ Sbjct: 698 RKLKEEKEEREKAKLEIKKLEKALSKVED 726
>SMC2_HUMAN (O95347) Structural maintenance of chromosome 2-like 1 protein| (Chromosome-associated protein E) (hCAP-E) (XCAP-E homolog) Length = 1197 Score = 28.9 bits (63), Expect = 5.1 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 4/69 (5%) Frame = +2 Query: 140 LRDLRQRIREVQKVLGDASKDSDLPKN----ANEKVKALEQTLVKGKQTQDDCSVAVKKL 307 LR L + E Q+V + DL K K K LE+ +V+ +T VKK+ Sbjct: 296 LRSLEDALAEAQRVNTKSQSAFDLKKKNLACEESKRKELEKNMVEDSKTLAAKEKEVKKI 355 Query: 308 RAMLHSAEE 334 LH+ +E Sbjct: 356 TDGLHALQE 364
>MYO1_YEAST (P08964) Myosin-1 (Type II myosin)| Length = 1928 Score = 28.9 bits (63), Expect = 5.1 Identities = 19/75 (25%), Positives = 34/75 (45%) Frame = +2 Query: 146 DLRQRIREVQKVLGDASKDSDLPKNANEKVKALEQTLVKGKQTQDDCSVAVKKLRAMLHS 325 DL Q+ +Q S + K EK+K LE+TL + VK L+A + Sbjct: 1690 DLNQKTDALQISNAALSSSTQKNKEITEKIKYLEETLQLQMEQNSRNGELVKTLQASCNG 1749 Query: 326 AEEQLHAQKKQTVFL 370 +++ +K++ + L Sbjct: 1750 YKDKFDDEKQKNIDL 1764
>SNPH_HUMAN (O15079) Syntaphilin| Length = 538 Score = 28.9 bits (63), Expect = 5.1 Identities = 25/104 (24%), Positives = 50/104 (48%), Gaps = 2/104 (1%) Frame = +2 Query: 53 DTRVRDIRDQLIKAKV-YLGLGAIRANPQY-LRDLRQRIREVQKVLGDASKDSDLPKNAN 226 DT + D++ QL + + ++ R Q L++ R+ I+++++V+ + N Sbjct: 148 DTEIDDLKTQLSRMQEDWIEEECHRVEAQLALKEARKEIKQLKQVI------DTVKNNLI 201 Query: 227 EKVKALEQTLVKGKQTQDDCSVAVKKLRAMLHSAEEQLHAQKKQ 358 +K K L++ V D ++ KKL +LHS E + K+ Sbjct: 202 DKDKGLQKYFV-------DINIQNKKLETLLHSMEVAQNGMAKE 238
>AMOT_HUMAN (Q4VCS5) Angiomotin| Length = 1084 Score = 28.9 bits (63), Expect = 5.1 Identities = 25/94 (26%), Positives = 41/94 (43%) Frame = +2 Query: 74 RDQLIKAKVYLGLGAIRANPQYLRDLRQRIREVQKVLGDASKDSDLPKNANEKVKALEQT 253 R+ L KA G IR + RDLR+R+ K L + + + + K + Q Sbjct: 486 REALEKAMRNKLEGEIRRMHDFNRDLRERLETANKQLAEKEYE-----GSEDTRKTISQL 540 Query: 254 LVKGKQTQDDCSVAVKKLRAMLHSAEEQLHAQKK 355 K K++Q + +KL A L +A Q++ Sbjct: 541 FAKNKESQRE----KEKLEAELATARSTNEDQRR 570
>MY18B_HUMAN (Q8IUG5) Myosin-18B (Myosin XVIIIb)| Length = 2567 Score = 28.9 bits (63), Expect = 5.1 Identities = 30/108 (27%), Positives = 56/108 (51%), Gaps = 7/108 (6%) Frame = +2 Query: 47 LSDTRVR-DIRDQLIKAKVYLGLGAIRANPQYLRDLRQRIREVQKVLGDASKDSDLPKNA 223 L+D R + D+ Q+++++ L A R +++L+ + +VQK LGD +K + A Sbjct: 1446 LADERFKGDVACQVLESERAERLQAFRE----VQELKSKHEQVQKKLGDVNKQLE---EA 1498 Query: 224 NEKVKA--LEQTLVKGK---QTQDDCSVAVKK-LRAMLHSAEEQLHAQ 349 +K++ LE+ G Q + DC+ + LR L EE+L ++ Sbjct: 1499 QQKIQLNDLERNPTGGADEWQMRFDCAQMENEFLRKRLQQCEERLDSE 1546
>GOGA1_HUMAN (Q92805) Golgin subfamily A member 1 (Golgin-97)| Length = 767 Score = 28.5 bits (62), Expect = 6.7 Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 3/110 (2%) Frame = +2 Query: 74 RDQLIKAKVYLG--LGAIRANPQYLRDLRQRIR-EVQKVLGDASKDSDLPKNANEKVKAL 244 RD +I +K + A+ Q L+ L Q++ ++QKV + + D+ + EKV +L Sbjct: 244 RDHVIASKTGAESKITALEQKEQELQALIQQLSIDLQKVTAETQEKEDVITHLQEKVASL 303 Query: 245 EQTLVKGKQTQDDCSVAVKKLRAMLHSAEEQLHAQKKQTVFLTQLAAKTL 394 E+ L + ++ V++L AE+ L ++Q + AK + Sbjct: 304 EKRLEQNLSGEEH----VQELLKEKTLAEQNLEDTRQQLLAARSSQAKAI 349
>YLF2_YEAST (P38746) Putative GTP-binding protein YLF2| Length = 405 Score = 28.5 bits (62), Expect = 6.7 Identities = 13/46 (28%), Positives = 27/46 (58%) Frame = +2 Query: 134 QYLRDLRQRIREVQKVLGDASKDSDLPKNANEKVKALEQTLVKGKQ 271 ++L ++R+R+ + +++ SK+ K E + ALE+ L GK+ Sbjct: 153 EFLENIRERLSKKMRMVSKNSKEHQEMKIETELLDALEEHLFNGKK 198
>EMBP_HUMAN (P13727) Eosinophil granule major basic protein precursor (MBP)| (EMBP) (Pregnancy-associated major basic protein) (Proteoglycan 2, bone marrow) (BMPG) Length = 222 Score = 28.5 bits (62), Expect = 6.7 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = +2 Query: 305 LRAMLHSAEEQLHAQKKQTVFLTQLAAKTLPK 400 L A+L A LH + + + F T L AKTLP+ Sbjct: 6 LLALLFGAVSALHLRSETSTFETPLGAKTLPE 37
>YNJ5_CAEEL (P34549) Hypothetical protein R10E11.5| Length = 529 Score = 28.5 bits (62), Expect = 6.7 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Frame = +2 Query: 134 QYLRDLRQRIREVQKVLGD--ASKDSDLPKNANEKVKALEQTLVKGKQTQDDCSVAVK 301 Q +++++ + EV+K + A K D+ K + K+LE+T K D+ S A+K Sbjct: 404 QTVKNIKSNVNEVKKDVEKNIAEKVDDITKELEKSAKSLEETTDKIGSKIDNTSQAIK 461
>LON_BUCAP (Q8K988) ATP-dependent protease La (EC 3.4.21.53)| Length = 777 Score = 28.5 bits (62), Expect = 6.7 Identities = 16/56 (28%), Positives = 30/56 (53%) Frame = +2 Query: 149 LRQRIREVQKVLGDASKDSDLPKNANEKVKALEQTLVKGKQTQDDCSVAVKKLRAM 316 L ++I+ +QK LGD + D K K+K+L+ K+ ++ ++KL+ M Sbjct: 230 LNEQIKAIQKELGDMDEIPDENKILKRKIKSLKMP----KEAKEKTESELQKLKMM 281
>ISPG_NOCFA (Q5YS74) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC| 1.17.4.3) (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase) Length = 385 Score = 28.5 bits (62), Expect = 6.7 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +2 Query: 86 IKAKVYLGLGAIRANPQYLRDLRQRIREVQKVLGDASKDSDLPKNANEKVKAL 244 I A + G A+R NP +++ R++EV K G A + NA K + Sbjct: 105 IFAAIDAGCAAVRVNPGNIKEFDGRVKEVAKAAGAAGIPIRIGVNAGSLDKRM 157
>ISPG_COREF (Q8FP82) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC| 1.17.4.3) (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase) Length = 378 Score = 28.5 bits (62), Expect = 6.7 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = +2 Query: 107 GLGAIRANPQYLRDLRQRIREVQKVLGDA 193 G A+R NP +++ R++EV + GDA Sbjct: 97 GCAAVRVNPGNIKEFDGRVKEVAQAAGDA 125
>HSP70_HYDMA (Q05944) Heat shock 70 kDa protein| Length = 654 Score = 28.5 bits (62), Expect = 6.7 Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 7/78 (8%) Frame = +2 Query: 146 DLRQRIREVQKVLGD--ASKDSDLPKNANEKV-----KALEQTLVKGKQTQDDCSVAVKK 304 D+ + ++E +K D +D KN+ E + +E VKGK +++D +KK Sbjct: 521 DIERMVQEAEKYKADDELQRDKVQAKNSLESYCYNMKQTVEDEKVKGKISEEDKKTIIKK 580 Query: 305 LRAMLHSAEEQLHAQKKQ 358 + ++ A+K Q Sbjct: 581 CNETVEWVDKNQTAEKDQ 598
>MY18A_HUMAN (Q92614) Myosin-18A (Myosin XVIIIa) (Myosin containing PDZ domain)| (Molecule associated with JAK3 N-terminus) (MAJN) Length = 2054 Score = 28.5 bits (62), Expect = 6.7 Identities = 19/67 (28%), Positives = 35/67 (52%) Frame = +2 Query: 149 LRQRIREVQKVLGDASKDSDLPKNANEKVKALEQTLVKGKQTQDDCSVAVKKLRAMLHSA 328 LR+ ++ + +L DA D KN+ + + Q + ++++ C+ AVK +AM Sbjct: 1654 LRKDLKRTKALLADAQLMLDHLKNSAPSKREIAQLKNQLEESEFTCAAAVKARKAMEVEI 1713 Query: 329 EEQLHAQ 349 E+ LH Q Sbjct: 1714 ED-LHLQ 1719
>FUT8_BOVIN (Q9N0W2) Alpha-(1,6)-fucosyltransferase (EC 2.4.1.68) (Glycoprotein| 6-alpha-L-fucosyltransferase) (GDP-fucose--glycoprotein fucosyltransferase) (GDP-L-Fuc:N-acetyl-beta-D-glucosaminide alpha1,6-fucosyltransferase) (alpha1-6FucT) (Fucosyltransf Length = 575 Score = 28.1 bits (61), Expect = 8.8 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 2/68 (2%) Frame = +2 Query: 164 REVQKVLGDASKDSDLPKNANEKVKALEQTL--VKGKQTQDDCSVAVKKLRAMLHSAEEQ 337 RE+ K+L + K NE ++ + ++L +G Q S ++ L L A+EQ Sbjct: 41 RELSKILAKLER----LKQQNEDLRRMAESLRIPEGPIDQGPASGRIRALEEQLVKAKEQ 96 Query: 338 LHAQKKQT 361 + KKQT Sbjct: 97 IENYKKQT 104
>SOX9_CANFA (Q7YRJ7) Transcription factor SOX-9| Length = 513 Score = 28.1 bits (61), Expect = 8.8 Identities = 21/60 (35%), Positives = 25/60 (41%) Frame = -2 Query: 344 HAAAPLLSEA*PGAF*QQQSNHPVSVCP*PMSAQVLSPSHWHSLVDQSPWMHHQAPFELP 165 H PL SE PG Q Q H + + LSPSH+ SP +PF LP Sbjct: 384 HTLTPLSSE--PG---QAQRTH--------IKTEQLSPSHYSEQQQHSPQQIAYSPFSLP 430
>NXF2_DROME (Q9VV73) Nuclear RNA export factor 2| Length = 841 Score = 28.1 bits (61), Expect = 8.8 Identities = 31/93 (33%), Positives = 41/93 (44%), Gaps = 8/93 (8%) Frame = +2 Query: 14 ENTDGRSRNMPLSDTRVRDIRDQLIKAKVYLGLGAIRAN-----PQYLRDLRQ-RIREVQ 175 +N R LS+ R+RDIR + A V L +R N + R L Q R RE+ Sbjct: 195 DNERFRLNGFILSNNRIRDIRPLTLLANVDYALLDLRGNKIKSAERLCRALEQFRARELL 254 Query: 176 KVLGDASKDSDLPKNANEKVKALEQT--LVKGK 268 K S+ P N +K+LE LV GK Sbjct: 255 LENNPIVKISNFPAN----IKSLESNFELVDGK 283
>CM007_PONPY (Q5RD97) Protein C13orf7 homolog| Length = 726 Score = 28.1 bits (61), Expect = 8.8 Identities = 21/91 (23%), Positives = 45/91 (49%), Gaps = 7/91 (7%) Frame = +2 Query: 11 KENTDGRSRNMPLSDTRVRDIRDQLI-------KAKVYLGLGAIRANPQYLRDLRQRIRE 169 KE + +S+N+ L +++++ I D L + K + + NP+ + + ++++R Sbjct: 108 KEVEELKSKNLSL-ESQIKTILDPLTLVQGNQNEDKHLVTDNPSKINPETVAEWKKKLRT 166 Query: 170 VQKVLGDASKDSDLPKNANEKVKALEQTLVK 262 ++ D D K AN+K+K LV+ Sbjct: 167 ANEIYEKVKDDVDKLKEANKKLKLENGGLVR 197
>CM007_HUMAN (Q5W0B1) Protein C13orf7| Length = 726 Score = 28.1 bits (61), Expect = 8.8 Identities = 21/91 (23%), Positives = 45/91 (49%), Gaps = 7/91 (7%) Frame = +2 Query: 11 KENTDGRSRNMPLSDTRVRDIRDQLI-------KAKVYLGLGAIRANPQYLRDLRQRIRE 169 KE + +S+N+ L +++++ I D L + K + + NP+ + + ++++R Sbjct: 108 KEVEELKSKNLSL-ESQIKTILDPLTLVQGNQNEDKHLVTDNPSKINPETVAEWKKKLRT 166 Query: 170 VQKVLGDASKDSDLPKNANEKVKALEQTLVK 262 ++ D D K AN+K+K LV+ Sbjct: 167 ANEIYEKVKDDVDKLKEANKKLKLENGGLVR 197
>RAD50_PYRKO (Q5JHN1) DNA double-strand break repair rad50 ATPase| Length = 883 Score = 28.1 bits (61), Expect = 8.8 Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 16/88 (18%) Frame = +2 Query: 140 LRDLRQRIREVQKVLGDASKDSDLPK--NANEK--------------VKALEQTLVKGKQ 271 L+++ ++IRE ++ L K+ DL K ANEK +K+LE + KG+ Sbjct: 500 LKEVLEQIRETEEKL----KEYDLEKLEEANEKAEELKKKLAGLEGEIKSLEDEIKKGEL 555 Query: 272 TQDDCSVAVKKLRAMLHSAEEQLHAQKK 355 + ++ KKLR + L KK Sbjct: 556 LKKKLALVEKKLRELEEERASLLGELKK 583 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,195,523 Number of Sequences: 219361 Number of extensions: 1172341 Number of successful extensions: 3681 Number of sequences better than 10.0: 47 Number of HSP's better than 10.0 without gapping: 3540 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3670 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2278320915 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
